mRNA_H-elongata_contig11444.1149.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11444.1149.1
Unique NamemRNA_H-elongata_contig11444.1149.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig11444.1149.1 vs. uniprot
Match: D7FS27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS27_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 8.350e-121
Identity = 212/354 (59.89%), Postives = 247/354 (69.77%), Query Frame = 1
Query:    1 AAGGIFSTGALFPLEVIKTNLQARTKGR--RPENYPPGEAGEEGGLAEPANIVVGEERPGGRVTSRTGHQEGGKKEERGKRRNFLGQEEQDTDSSPSVVSVAQDVHDREGFRGFYRGVCYAAGQSGVEKAAYFYGYGWLKALSLRIGGGRELSTTTDLVLGYLAEALHLPFTIPIEVVVTKIVTSREKTNAFAVIQGILAESGPAGFFKGIKAYIILCLKPAIQYTIFNRLKTLTLACRRGAGGSSGPAELTALQAFVIGAASRAVATVVVFPYIRAKVIMMTRAEEGAGGEGEKS--TSSVASLVSILNEGGISSLFQGITPEITRGVLSSALMLMVKEKIHSMVRGAIVGQK 1050
            AAGG+FS GAL+PLEVIKTNLQA TK    RP      EA                                               EE+  D  PSV SVA+D++ REG  G YRGV YA+ QSGVEKAAYFYGYGWLKAL+LR GG  ELST  DL LGYLAEA HLPFTIPIEVV+TKI+TS+EKTNAFAVIQGIL+ESGPAGF+ GI+AY +LCLKPAIQY +FNRLK +TLA R     S+ P ELTA+QAFVIGA SRAVATV+VFPYIRAKVI+M++      G G KS  TS ++SL+++L + G S+LFQGITPEI RGVLS+ALM++VKEKIHS V+GAIVG +
Sbjct:   11 AAGGMFSAGALYPLEVIKTNLQAHTKQSTGRPSPSQTEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXEERQLDCPPSVASVAKDIYSREGIAGLYRGVWYASTQSGVEKAAYFYGYGWLKALALRGGGRGELSTAKDLGLGYLAEAFHLPFTIPIEVVLTKIMTSKEKTNAFAVIQGILSESGPAGFYTGIQAYAVLCLKPAIQYAVFNRLKAITLAYRSDGRSSAQPKELTAVQAFVIGAISRAVATVIVFPYIRAKVIIMSKKTGEGSGNGTKSPSTSILSSLITLLKDDGFSALFQGITPEIGRGVLSAALMMLVKEKIHSTVKGAIVGNR 355          
BLAST of mRNA_H-elongata_contig11444.1149.1 vs. uniprot
Match: A0A7S4NE59_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NE59_9STRA)

HSP 1 Score: 208 bits (530), Expect = 9.780e-61
Identity = 139/380 (36.58%), Postives = 208/380 (54.74%), Query Frame = 1
Query:    1 AAGGIFSTGALFPLEVIKTNLQARTK-----GRRPENYPPGEA-----------GEEGGLAEPANIVVGEERPGGRVTSRTGHQEGGKKEERGKRRNFLGQEEQDTDSSP-SVVSVAQDVHDREGFRGFYRGVCYAAGQSGVEKAAYFYGYGWLKALSLRIGGGRELSTTTDLVLGYLAEALHLPFTIPIEVVVTKIVTSREKTNAFAVIQGILAESGPAGFFKGIKAYIILCLKPAIQYTIFNRLKTLTLACRRGAGGSSGPAE-----------LTALQAFVIGAASRAVATVVVFPYIRAKVIMM-TRAEEGAGGEGEKSTSSVASLVSILNEGGISSLFQGITPEITRGVLSSALMLMVKEKIHSMVRGAIVGQKK 1053
            + GG FS  AL+PLE++KT +QA TK     G   E  P   A           GEEG +  P++            T  T  ++   K+ +  +    G++++D   +P  ++  A+ +H   G   FY G+  +A QS +EK+ YF+ Y +LK     + G   + T  +LVLG LAE  HLP T+PI+ + T I T +    AFA++  +L+E G  G +KGI+AY +LCLKPAIQYT++ ++K + L  RR AG   G              L+A +AF +G  +R VAT++ FPY+RAKV++  T AE G  G         A +V +  EGG+S +FQG+ PE+TRG+ S+ALM+M KEK+  +V   +  QK+
Sbjct:   14 SVGGAFSASALYPLEMLKTRMQAETKVKKKKGGANEKQPEETAEIASSSADDGEGEEGAIPVPSSDEE---------TEPTRQKQAAHKKGKNAQPEDRGEDDEDEQEAPLGMIPYARKMHAEGGIGAFYSGIETSAIQSAMEKSLYFFAYTFLKNAYKTLTGLTSIDTIPNLVLGSLAEWAHLPVTLPIDCLTTAIQTDKTGRGAFALMSAMLSEKGVGGMYKGIQAYAVLCLKPAIQYTVYEQVKRMVLLERRLAGHHKGNLRHGSRRGDDVEALSAAEAFFLGMFARTVATMITFPYVRAKVMLQSTYAERGLKG------GIPAMIVEMYGEGGLSEVFQGLGPELTRGIFSAALMMMAKEKLAVVVNALVGAQKR 378          
BLAST of mRNA_H-elongata_contig11444.1149.1 vs. uniprot
Match: A0A7S2DY88_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2DY88_9STRA)

HSP 1 Score: 206 bits (524), Expect = 2.300e-60
Identity = 135/358 (37.71%), Postives = 202/358 (56.42%), Query Frame = 1
Query:    7 GGIFSTGALFPLEVIKTNLQARTKGRRPENYPPGEAGEEGGLAEPANIVVGEERPGGRVTSRTGHQEGGKKEERGKRRNFLGQEEQDTDSSPSVVSVAQDVHDREGFRGFYRGVCYAAGQSGVEKAAYFYGYGWLKAL--SLRIGGGRE---LSTTTDLVLGYLAEALHLPFTIPIEVVVTKIVTSREKTNAFAVIQGILAESGPAGFFKGIKAYIILCLKPAIQYTIFNRLKTLTLACRRGAGGSSGPAELTALQAFVIGAASRAVATVVVFPYIRAKVIMMTR---AEEGAGGEGEKSTSSVASLVS-ILNEGGISSLFQGITPEITRGVLSSALMLMVKEKIHSMVRGAIVGQKK 1053
            GG FS  AL+PLEV+KT +QA T                                    +S+T   E G +E+        G++EQ   +S  +++ +Q ++   G   FY G+  +A QS +EKA YF+ Y  LK +  ++ I  G +   + T  +LVLG +AE  HLP T+PI+ + TKI T      AFA++  +L+E G AG +KGI+AY +LCLKPAIQYT+F ++K + L  RR A G +    L A +AF++G  +R  AT+ VFPY+RAKV++ +     E+G+   G K    + S+++ +   GG++ +F+GI PE+TRGVLS+ALMLM KEKI + VR  + G  +
Sbjct:   16 GGAFSASALYPLEVLKTKMQAETSD----------------------------------SSKTNATENGDEEK--------GEQEQ---ASLGMIAYSQKMYAENGIGAFYSGIGTSAFQSAMEKALYFFAYTALKNVYKTMAILTGSDDGRIGTFANLVLGSMAEWAHLPITLPIDCLTTKIQTDSSGKGAFALLSAMLSEKGIAGMYKGIQAYTVLCLKPAIQYTVFEQVKRVVLLGRRNADGRT-DYSLGAAEAFLLGMVARLAATIAVFPYLRAKVMLQSTYADVEDGSNTGGTKKKKGIPSMIAEMYASGGVAEMFRGIGPELTRGVLSAALMLMAKEKISAAVRATVEGDDR 327          
BLAST of mRNA_H-elongata_contig11444.1149.1 vs. uniprot
Match: K0RBA8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RBA8_THAOC)

HSP 1 Score: 203 bits (517), Expect = 2.340e-59
Identity = 131/350 (37.43%), Postives = 197/350 (56.29%), Query Frame = 1
Query:    7 GGIFSTGALFPLEVIKTNLQARTKGRRPENYPPGEAGEEGGLAEPANIVVGEERPGGRVTSRTGHQEGGKKEERGKRRNFLGQEEQDTDSSPSVVSVAQDVHDREGFRGFYRGVCYAAGQSGVEKAAYFYGYGWLKALSLRIGGGRELSTTTDLVLGYLAEALHLPFTIPIEVVVTKIVTSREKTNAFAVIQGILAESGPAGFFKGIKAYIILCLKPAIQYTIFNRLKTLTLACRRGAGGSSGPAE--LTALQAFVIGAASRAVATVVVFPYIRAKVIMMTRAEEGAGGEGEKSTSSVASLVSILNEGGISSLFQGITPEITRGVLSSALMLMVKEKIHSMVRGAIVGQK 1050
            GG+FS  AL+PLE++KT +QA +K       P G+ G+E    + A ++  EE    R T                             ++  + S A  + ++EG   FY GV  +A QS  EKA YF+ Y +LK   + + G + +   ++LVLG  AE  HLP T+PI+ V T I T  +   AF +I  IL+E G  GF+KGI+AY +LCLKPAIQYT++ ++K++ LA RR A       E  LTA +AF +G  +R VAT++ +PY+RAKV++     +   G  +   +    +   ++ GG+++L+QGI PE+TRGV S+ALM+MVKE+I  +V+  I G +
Sbjct:   15 GGMFSASALYPLEILKTRMQAESKA------PKGD-GDEEEKKDAAEVLTPEEDLKARYTEA---------------------------AAEGMGSYASLMLEKEGGGAFYTGVVTSAVQSATEKALYFFAYTFLKNGYVDLTGVQNIGAMSNLVLGCFAEWAHLPVTLPIDCVTTAIQTDDKNRGAFVLIGSILSEKGIGGFYKGIEAYTVLCLKPAIQYTVYEQVKSIVLAGRRAAASGRAAVEDSLTAAEAFFLGMFARIVATMLTYPYLRAKVML-----QSTYGNAKVKPTIPQMIGEQISHGGLTALYQGIGPELTRGVFSAALMMMVKERIGVVVKALIDGNR 325          
BLAST of mRNA_H-elongata_contig11444.1149.1 vs. uniprot
Match: A0A7S1UFP1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFP1_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.340e-56
Identity = 113/260 (43.46%), Postives = 167/260 (64.23%), Query Frame = 1
Query:  274 SSPSVVSVAQDVHDREGFRGFYRGVCYAAGQSGVEKAAYFYGYGWLKALSLRIGGGRELSTTTDLVLGYLAEALHLPFTIPIEVVVTKIVTSREKTNA-FAVIQGILAESGPAGFFKGIKAYIILCLKPAIQYTIFNRLKTLTLACRRGAGGSSGPAELTALQAFVIGAASRAVATVVVFPYIRAKVIMMTRAEEGAGGEGEK--STSSVASLVSILNEGGISSLFQGITPEITRGVLSSALMLMVKEKIHSMVRGAIVG 1044
            ++PS + VA+ +++  G + FYRGV  +A QS VEK  YFY Y   K+ + R     E+  TT +VLGYL++  HLP T+PIEVV  K+ T+R +    + ++  +LAESG  G ++G +AY+ LC +PA+QY I+++LK L L  +R         ELT+ +AF++GA SRA+AT+++FPY RAKV+        A    E+  S S V+ LV I  + G+  LFQG+ PE+ RGV S+ALMLMVKEK+ + V+ A++G
Sbjct:   99 AAPSTLEVARALYEDGGAKSFYRGVGISAVQSLVEKFCYFYAYSLFKSGARRASRRGEVGPTTGIVLGYLSDWSHLPVTLPIEVVCRKMQTARGRNPLPYVILNEVLAESGYKGLYRGWEAYLFLCWRPAVQYAIYDQLKALLLKAKRRK-------ELTSAEAFLLGAVSRAIATIILFPYARAKVVAQAGKNASADRPEEERASASMVSVLVQIYRDEGVPGLFQGLGPELVRGVFSAALMLMVKEKLTASVKRALLG 351          
BLAST of mRNA_H-elongata_contig11444.1149.1 vs. uniprot
Match: A0A6S8YJ66_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YJ66_9STRA)

HSP 1 Score: 193 bits (490), Expect = 2.590e-55
Identity = 126/364 (34.62%), Postives = 194/364 (53.30%), Query Frame = 1
Query:    7 GGIFSTGALFPLEVIKTNLQARTKGRRPENYPPGEAGEEGGLAEPANIVVGEERPGGRVTSRTGHQEGGKKEERGKRRNFLGQEEQDTDSSPS-VVSVAQDVHDREGFRGFYRGVCYAAGQSGVEKAAYFYGYGWLKAL--SLRIGGGRE---LSTTTDLVLGYLAEALHLPFTIPIEVVVTKIVTSREKTNAFAVIQGILAESGPAGFFKGIKAYIILCLKPAIQYTIFNRLKTLTLACRRGAGGSSGPAELTALQAFVIGAASRAVATVVVFPYIRAKVIMMTRAEEGAGGEGEKSTSSVAS---------LVSILNEGGISSLFQGITPEITRGVLSSALMLMVKEKIHSMVRGAIVGQKK 1053
            GG FS  AL+PLEV+KT +QA                      EP++                             +++  G  E D +  PS +++ ++ ++   G  GFY G+  +A QS +EKA YF+ Y  +K +   +++  G +   + T  +LVLG +AE  HLP T+PI+ + TKI T      AFA++  +L+E G  G +KGI+AY +LCLKPAIQYT+F ++K + L  R  AGG +    L A +AF++G  +R  AT+ VFPY+RAKV M+   +     +  K+T+  A+         +  +   GGI  +++GI PE+TRG+ S+ALM+M KEKI  +V+ A+ G  K
Sbjct:   16 GGAFSASALYPLEVLKTKMQA----------------------EPSS-----------------------------KKSTSGDGEDDKEEKPSGMIAYSKKMYAENGLAGFYSGIGTSAFQSSMEKALYFFAYTGMKNVYKMMKVLMGNDDGNIGTFANLVLGSMAEWAHLPITLPIDCLTTKIQTDSSGKGAFALLSIMLSEKGIGGMYKGIQAYTVLCLKPAIQYTVFEQVKKVVLLSRARAGGRADNNSLGAAEAFLLGMVARLAATIAVFPYLRAKV-MLQSTKSSTDNDDVKTTTPAATQKNKGIPSMIAEMYASGGIGEMYRGIGPELTRGIFSAALMMMAKEKISEVVKVALEGDDK 327          
BLAST of mRNA_H-elongata_contig11444.1149.1 vs. uniprot
Match: A0A835ZGU7_9STRA (Mitochondrial carrier domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGU7_9STRA)

HSP 1 Score: 191 bits (484), Expect = 3.940e-55
Identity = 111/257 (43.19%), Postives = 158/257 (61.48%), Query Frame = 1
Query:  283 SVVSVAQDVHDREGFRGFYRGVCYAAGQSGVEKAAYFYGYGWLKALSLRIGGGRELSTTTDLVLGYLAEALHLPFTIPIEVVVTKIVTSREKTN---AFAVIQGILAESGPAGFFKGIKAYIILCLKPAIQYTIFNRLKTLTLACRRGAGGSSGPAE----------LTALQAFVIGAASRAVATVVVFPYIRAKVIMMTRAEEGAGGEGEKSTSSVA-SLVSILNEGGISSLFQGITPEITRGVLSSALMLMVKEK 1011
            S +SVA+ +    G  G Y GV Y+  +  +EKAAYFYGYGWL+  ++   GGR      D+ LGY A+A HLP T+P+++V+ +++T+R  +    A  +++GIL   G  G ++G +AY++LCLKPA+QY IFNRL+   LA                       L+A QAF +GA +RA+ATV VFP+ RAKV+ MT  ++G   E  K   S+  SLV I    G  +LF+G+ PE+TRGVLS+ALMLM+KE+
Sbjct:    3 SSLSVARHIIQCRGAAGLYDGVEYSVLEGALEKAAYFYGYGWLRRAAVAARGGRPPGALADVALGYAADACHLPLTLPLQLVLARLITARGGSGGAGADGIVRGILKTQGWRGLYRGARAYVVLCLKPALQYAIFNRLRGAVLAXXXXXXXXXXXXXXXXXXXXXXTLSAAQAFALGAIARAIATVAVFPFTRAKVLAMT--DDGGHSESGKPPPSILQSLVLIARTEGPRALFKGVGPELTRGVLSAALMLMIKER 257          
BLAST of mRNA_H-elongata_contig11444.1149.1 vs. uniprot
Match: A0A8K1C5M4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5M4_PYTOL)

HSP 1 Score: 190 bits (482), Expect = 1.610e-54
Identity = 108/241 (44.81%), Postives = 159/241 (65.98%), Query Frame = 1
Query:  328 RGFYRGVCYAAGQSGVEKAAYFYGYGWLKALSLRIGGGRELSTTTDLVLGYLAEALHLPFTIPIEVVVTKIVTSREKT-NAFAVIQGILAESGPAGFFKGIKAYIILCLKPAIQYTIFNRLKTLTLACRRGAGGSSGPAELTALQAFVIGAASRAVATVVVFPYIRAKVIMMTRAEEGAGGEGE-------KSTSSVASLVSILNEGGISSLFQGITPEITRGVLSSALMLMVKEKIHSMV 1026
            R FYRG  Y A +S V K  YFY Y  L A  +    G+ + T T+L +GYL+E  HLP T+P+EV+ T++ TS + + N   +I+ +L ESG  GF+KG +AY +LCL+PAIQYT+F R+KT+ L+  + A  S     L+AL+AF++GA +R++AT+++FPYIR KV++ ++ ++ A  EGE       K    VA L  +  E G  +L++G+TPE+T+G LSSALMLM+KEKI   +
Sbjct:   56 RSFYRGYQYKAAESTVSKFLYFYAY-TLLAQIVAPPDGKSIGTATNLAVGYLSEFFHLPLTLPMEVIATRLQTSSKGSGNVLQIIRKVLEESGVKGFYKGFQAYFVLCLQPAIQYTVFERVKTVYLSRAKDAAKS-----LSALEAFLLGAIARSIATLLLFPYIRGKVLLQSKNKKAAAIEGEAKSNDAKKEEGIVAILQRVYKEEGPLALYRGLTPELTKGALSSALMLMIKEKIQMYI 290          
BLAST of mRNA_H-elongata_contig11444.1149.1 vs. uniprot
Match: A0A7S2P208_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P208_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.580e-54
Identity = 127/352 (36.08%), Postives = 193/352 (54.83%), Query Frame = 1
Query:    1 AAGGIFSTGALFPLEVIKTNLQARTKGRRPENYPPGEAGEEGGLAEPANIVVGEERPGGRVTSRTGHQEGGKKEERGKRRNFLGQEEQDTDSSP-----SVVSVAQDVHDREGFRGFYRGVCYAAGQSGVEKAAYFYGYGWLKALSLRIGGGRELSTTTDLVLGYLAEALHLPFTIPIEVVVTKIVTSREKTNAFAVIQGILAESGPAGFFKGIKAYIILCLKPAIQYTIFNRLKTLTLACRRGAG-GSSGPAE----LTALQAFVIGAASRAVATVVVFPYIRAKVIMMTRAEEGAGGEGEKSTSSVASLVSILNEGGISSLFQGITPEITRGVLSSALMLMVKEKIHSMV 1026
            + GG  S   L+PLEV+KT +QA      P              AEP++   G+   G   T+ +   E             + ++ +D DSS      S +   ++++   G   FY G+  +A QS  EKA YF+ Y + K     I GG  + TT +L+LG +AE  HLP T+PI+ + TKI TS+   N + ++  + +E G +G +KG +AY +LCLKPAIQYT++ ++K + L  R+ A  GS G  +    L+A ++F++G  +RA++T +VFPY RAKV++    +     E   +TS    L  + NE G  SLF G+ PE+TRGVLS+A MLM+KE+I S +
Sbjct:   16 SVGGAISASVLYPLEVLKTKMQAVESSDAP--------------AEPSS---GDSNAGSEDTTTSASYE------------KIAEDAEDQDSSKPKKNLSAIEFTKEMYKDGGVAVFYDGIGTSAFQSACEKALYFFAYTYFKNFYKGIKGG-AIGTTENLILGGMAEWAHLPITLPIDCLTTKIQTSKTNDNPYRIMMAMFSEKGLSGMYKGWEAYTVLCLKPAIQYTVYEQIKGIMLRRRKAAPKGSRGRGKSANTLSAAESFLLGMVARAISTTLVFPYTRAKVMLQANKKNDGSDE---TTSIPQMLTKMYNEQGFQSLFIGLGPELTRGVLSTAFMLMIKEQIGSFM 334          
BLAST of mRNA_H-elongata_contig11444.1149.1 vs. uniprot
Match: A0A7S4L290_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L290_GUITH)

HSP 1 Score: 187 bits (474), Expect = 3.790e-53
Identity = 128/344 (37.21%), Postives = 183/344 (53.20%), Query Frame = 1
Query:    1 AAGGIFSTGALFPLEVIKTNLQARTKGRRPENYPPGEAGEEGGLAEPANIVVGEERPGGRVTSRTGHQEGGKKEERGKRRNFLGQEEQDTDSSPSVVSVAQDVHDREGFRGFYRGVCYAAGQSGVEKAAYFYGYGWLKALSLRIGGGRELSTTTDLVLGYLAEALHLPFTIPIEVVVTKIVTSR-EKTNAFAVIQGILAESGPAGFFKGIKAYIILCLKPAIQYTIFNRLKTLTLACRRGAGGSSGPAELTALQAFVIGAASRAVATVVVFPYIRAKVIMMTRAEEGAGGEGEKSTSSVASLVSILNEGGISSLFQGITPEITRGVLSSALMLMVKEKIHSMVR 1029
            A GG FS+  L+P+E+ K  LQA  K +                +E  N+         +      H                           +++SVA+D++  EG  GFY+G  Y+A QS  EKA YF+GY ++     ++ G  ++ T + ++ G LAE +HLP T+PI+ V  +I T +  K N   ++  I+ ESG  G + G  AYI+LCLKPAI Y +F+ LK   L  R    G      LTAL+AF+IGA +RAVAT+ VFPY RAKVI+ +   +     GE++ S   ++  I+   G  SL+QG TPE+TRGVLS+A+ML VKEKI + VR
Sbjct:   16 ACGGAFSSSCLYPIEICKNRLQAMQKKQN--------------QSEQENV---------KXXXXXXH-------------------------PTTMISVAKDLYKSEGVPGFYKGFQYSAIQSATEKAIYFWGYTYILKTWKKLFG--DVGTASSVLCGCLAEWVHLPVTLPIDAVTVRIQTVKGSKANPLQILASIIRESGIKGLYSGWTAYIVLCLKPAITYGLFDALKRWILK-RNSMRGGREVKVLTALEAFLIGAIARAVATIAVFPYTRAKVIVKSSQVQ----PGEQAPSIAGTVSRIVKNEGFLSLYQGCTPEVTRGVLSAAIMLAVKEKIAATVR 304          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11444.1149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS27_ECTSI8.350e-12159.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4NE59_9STRA9.780e-6136.58Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2DY88_9STRA2.300e-6037.71Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
K0RBA8_THAOC2.340e-5937.43Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S1UFP1_9STRA1.340e-5643.46Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A6S8YJ66_9STRA2.590e-5534.62Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A835ZGU7_9STRA3.940e-5543.19Mitochondrial carrier domain-containing protein (F... [more]
A0A8K1C5M4_PYTOL1.610e-5444.81Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2P208_9STRA4.580e-5436.08Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S4L290_GUITH3.790e-5337.21Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11444contigH-elongata_contig11444:5986..8661 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score364.0
Seed ortholog evalue7.9e-98
Seed eggNOG ortholog2880.D7FS27
Preferred namePNC1
KEGG koko:K07870,ko:K13354
KEGG TC2.A.29.20.1
KEGG Pathwayko04137,ko04146,ko04214,map04137,map04146,map04214
GOsGO:0000295,GO:0003674,GO:0005215,GO:0005346,GO:0005347,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005777,GO:0005778,GO:0005779,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006839,GO:0006855,GO:0006862,GO:0007275,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009056,GO:0009062,GO:0009791,GO:0009850,GO:0009987,GO:0010817,GO:0015075,GO:0015215,GO:0015216,GO:0015217,GO:0015238,GO:0015605,GO:0015711,GO:0015748,GO:0015865,GO:0015866,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0016042,GO:0016054,GO:0019395,GO:0019752,GO:0019866,GO:0022857,GO:0030258,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032787,GO:0034220,GO:0034440,GO:0034641,GO:0042221,GO:0042430,GO:0042445,GO:0042493,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046483,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051503,GO:0055085,GO:0055114,GO:0065007,GO:0065008,GO:0071702,GO:0071704,GO:0071705,GO:0072329,GO:0080024,GO:0090351,GO:0098588,GO:0098656,GO:0098805,GO:1901264,GO:1901360,GO:1901505,GO:1901564,GO:1901575,GO:1901679
EggNOG free text desc.Belongs to the allantoicase family
EggNOG OGsCOG4266@1,KOG0769@2759
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03029,ko04031
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-16_004580.1
Exons6
Model size1056
Cds size1056
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11444.1149.1prot_H-elongata_contig11444.1149.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11444 5986..8661 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929660.8384228-CDS-H-elongata_contig11444:5985..65071622929660.8384228-CDS-H-elongata_contig11444:5985..6507Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11444 5986..6507 +
1691679109.7095888-CDS-H-elongata_contig11444:5985..65071691679109.7095888-CDS-H-elongata_contig11444:5985..6507Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11444 5986..6507 +
1622929660.8556283-CDS-H-elongata_contig11444:6984..70921622929660.8556283-CDS-H-elongata_contig11444:6984..7092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11444 6985..7092 +
1691679109.7212555-CDS-H-elongata_contig11444:6984..70921691679109.7212555-CDS-H-elongata_contig11444:6984..7092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11444 6985..7092 +
1622929660.8735876-CDS-H-elongata_contig11444:7385..75141622929660.8735876-CDS-H-elongata_contig11444:7385..7514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11444 7386..7514 +
1691679109.7290053-CDS-H-elongata_contig11444:7385..75141691679109.7290053-CDS-H-elongata_contig11444:7385..7514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11444 7386..7514 +
1622929660.8889298-CDS-H-elongata_contig11444:7862..79481622929660.8889298-CDS-H-elongata_contig11444:7862..7948Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11444 7863..7948 +
1691679109.7366736-CDS-H-elongata_contig11444:7862..79481691679109.7366736-CDS-H-elongata_contig11444:7862..7948Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11444 7863..7948 +
1622929660.902702-CDS-H-elongata_contig11444:8242..83421622929660.902702-CDS-H-elongata_contig11444:8242..8342Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11444 8243..8342 +
1691679109.7473333-CDS-H-elongata_contig11444:8242..83421691679109.7473333-CDS-H-elongata_contig11444:8242..8342Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11444 8243..8342 +
1622929660.915335-CDS-H-elongata_contig11444:8550..86611622929660.915335-CDS-H-elongata_contig11444:8550..8661Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11444 8551..8661 +
1691679109.7580795-CDS-H-elongata_contig11444:8550..86611691679109.7580795-CDS-H-elongata_contig11444:8550..8661Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11444 8551..8661 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11444.1149.1

>prot_H-elongata_contig11444.1149.1 ID=prot_H-elongata_contig11444.1149.1|Name=mRNA_H-elongata_contig11444.1149.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=352bp
AAGGIFSTGALFPLEVIKTNLQARTKGRRPENYPPGEAGEEGGLAEPANI
VVGEERPGGRVTSRTGHQEGGKKEERGKRRNFLGQEEQDTDSSPSVVSVA
QDVHDREGFRGFYRGVCYAAGQSGVEKAAYFYGYGWLKALSLRIGGGREL
STTTDLVLGYLAEALHLPFTIPIEVVVTKIVTSREKTNAFAVIQGILAES
GPAGFFKGIKAYIILCLKPAIQYTIFNRLKTLTLACRRGAGGSSGPAELT
ALQAFVIGAASRAVATVVVFPYIRAKVIMMTRAEEGAGGEGEKSTSSVAS
LVSILNEGGISSLFQGITPEITRGVLSSALMLMVKEKIHSMVRGAIVGQK
K*
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mRNA from alignment at H-elongata_contig11444:5986..8661+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11444.1149.1 ID=mRNA_H-elongata_contig11444.1149.1|Name=mRNA_H-elongata_contig11444.1149.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2676bp|location=Sequence derived from alignment at H-elongata_contig11444:5986..8661+ (Himanthalia elongata Himel1 dioecious)
GCAGCGGGTGGAATATTTTCAACAGGCGCGCTCTTCCCCTTGGAAGTAAT CAAGACCAACCTCCAGGCGCGCACGAAAGGCAGACGGCCGGAAAATTATC CGCCCGGTGAGGCAGGCGAAGAAGGAGGACTGGCCGAGCCAGCCAACATT GTCGTCGGAGAGGAGAGGCCAGGAGGTAGAGTGACGAGTCGGACGGGCCA CCAAGAAGGCGGGAAGAAGGAGGAGCGAGGAAAGCGCAGAAATTTCCTTG GACAGGAGGAGCAAGATACGGATTCCTCGCCCTCCGTGGTGTCCGTCGCC CAAGATGTTCATGATCGCGAGGGTTTCCGGGGATTCTACAGGGGCGTTTG CTACGCCGCTGGCCAGAGCGGGGTCGAGAAGGCGGCGTACTTTTACGGGT ACGGGTGGCTAAAGGCGTTGTCATTGCGGATCGGGGGCGGGCGAGAGTTA AGCACGACGACGGACCTGGTGCTTGGATACCTAGCGGAGGCGCTTCACCT TCCCTTCACGATACCCATCGAGGTGGGGGGGGGGAACAGGCGCGTTCCAG ACGAGTGGTGTTGTTACGCCTCCCTAAAGATGACCCCGTGCGGTTAACGG TTGTTTGAGGTGTCATGGTTGTGCCCGTTATGTCGAAGGACGAAATATTT CCTCTGTACTCATCAATAATGATAATTTAAACGGAATTGCGGAGATAAAT ATCTTCCATTTATTAAGTCATTTATTGAAAACGCTTGCAGGCACCTCGTC TTTCCCTTGCCGCGACTGGACGCGGGTGCGTGGTACCGGTGGTCAATCGC TTTTTCGATCGAAATGTCAATGCTTGTTTACTTTTCAATGTATCATGGTG TATTTAACATTTTGCAACACACATCATTGATGGGCCTTCGGTTCTCTAAG CTTCATCTCAATATCGGCGTTAGAACATACCAGTGTAGACTGGAGCACGA TGCGCGCGTCTAACATCCGGAGCCCATGCGCGGCCGATATTCTCCTCAGG TCGTCGTCACAAAGATCGTTACGTCGCGAGAGAAGACTAACGCCTTTGCG GTGATCCAGGGCATTCTCGCTGAGAGTGGTCCCGCTGGATTTTTCAAGGG TATCAAGGTCGGTGCATTATTACACACAAGATCATATTTATGAAGTACAT GATAAATCTCGCTCTTGATGCTAGTGACGCCGTCAAGCTGCCGAAGAAAT GGGTTCGACAGGTGCCATTGAATAGCACTGGTCAGCGCGCGTGGCCAGCC GCCGCCGCACGTGACTTTACGGACAGCACGCGCGGCGGTGGCACTCACCC GGCGCTACGCTACAAACGTTTTGCGTCAAAACCCTTTATCCTTCTTGCAG AAGTGTTGACCTTCCCGTTCTTCTGGGCCGTTTCGTTACTGTATTTCCAG GCGTATATTATCCTGTGCCTTAAGCCGGCCATCCAGTACACCATTTTTAA CCGGCTCAAAACGCTCACGCTTGCCTGCCGACGCGGTGCGGGTGGATCGA GCGGGCCAGCGGAGCTCACTGCTCTACAGGTGCGCGTCTACCCTGTTGTC GTGGGGTCCCTTCCTGCTCGTGGGACGCGTTGCACGAACTCTTGAGCTTT TTCGTACGCCTCGGCCAGCCTTCCGCCGCACGTCTGCGTGACCCGGGGTC GTTACTGTGGTCAGCTACCGGTCTCTTGTTTGCCGGTGCTCTGAACGTTG GTGCGTGCCGCGGCGCAAAACGACCCTACCAAACCTCTTGCAGTCCAATG ATAATCGCGATATCGAGACAAAGCCTAGCGAAAATCAGCCGGGTGCGCGG CCCGTGCACGTAGTCTGGGACAGACGAGAGACGCAAAGCCGTGGATTCCC GCCGTGTTCGTCGTCGTTTTGGTGAAGGCGTTCGTGATCGGGGCTGCCTC ACGCGCCGTTGCGACGGTTGTCGTGTTCCCGTACATCCGAGCGAAAGTGA TCATGATGACCCGGTGAGACGAGATAATCAAAAAGGCTTCGAAGCTGAAC CAGGTGACTAACCTTCGCCAATCGCATGCTTGACCGTCCTCGTGGCGCTA CGTCCCCTCACCCGAAATACAAAACTTTGTCCGGCTGAAAACGGGGAGTG TTTTTGTGTTCGAGAGCGGTTTCGATAAACGCTGGCGGTAAGCAATTCTT TTTTTTGAAAGCGAAATATTTCGCTTACGACTATGGTTAATAACGCTGGT TACTAACTTATTCACTTCACTAACGTGGGTTTGTGTGTGTCATGCATCCA TGTGCAGGGCGGAGGAGGGGGCTGGTGGAGAAGGCGAGAAGTCGACGTCT AGTGTTGCCAGTCTCGTCTCCATTCTCAATGAAGGTGGAATATCATCCCT GTTCCAGGTAAGTTTAGCTCGGCCTCTAATTCTGAGGGGCGTCACGATTA GTGCTTGCAACTATTGTGATGTAGATTCAACCGTTTCGTTCCTCAGGCCA CGAATTTGTTGGTGATAGGGGTACTGTGCCGTGCGACATGATGTCCCAGC CACGGCCTTTTTCTATCACGCGAACCCGCGGTCCTCCAATACCTTCACGT CATTGTCGCCTCCAGGGCATCACCCCGGAGATCACTCGTGGAGTACTCTC GTCCGCGCTCATGCTCATGGTGAAGGAAAAGATACACTCGATGGTAAGAG GCGCTATCGTGGGCCAGAAAAAATGA
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Coding sequence (CDS) from alignment at H-elongata_contig11444:5986..8661+

>mRNA_H-elongata_contig11444.1149.1 ID=mRNA_H-elongata_contig11444.1149.1|Name=mRNA_H-elongata_contig11444.1149.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2112bp|location=Sequence derived from alignment at H-elongata_contig11444:5986..8661+ (Himanthalia elongata Himel1 dioecious)
GCAGCGGGTGGAATATTTTCAACAGGCGCGCTCTTCCCCTTGGAAGTAAT
CAAGACCAACCTCCAGGCGCGCACGAAAGGCAGACGGCCGGAAAATTATC
CGCCCGGTGAGGCAGGCGAAGAAGGAGGACTGGCCGAGCCAGCCAACATT
GTCGTCGGAGAGGAGAGGCCAGGAGGTAGAGTGACGAGTCGGACGGGCCA
CCAAGAAGGCGGGAAGAAGGAGGAGCGAGGAAAGCGCAGAAATTTCCTTG
GACAGGAGGAGCAAGATACGGATTCCTCGCCCTCCGTGGTGTCCGTCGCC
CAAGATGTTCATGATCGCGAGGGTTTCCGGGGATTCTACAGGGGCGTTTG
CTACGCCGCTGGCCAGAGCGGGGTCGAGAAGGCGGCGTACTTTTACGGGT
ACGGGTGGCTAAAGGCGTTGTCATTGCGGATCGGGGGCGGGCGAGAGTTA
AGCACGACGACGGACCTGGTGCTTGGATACCTAGCGGAGGCGCTTCACCT
TCCCTTCACGATACCCATCGAGGCAGCGGGTGGAATATTTTCAACAGGCG
CGCTCTTCCCCTTGGAAGTAATCAAGACCAACCTCCAGGCGCGCACGAAA
GGCAGACGGCCGGAAAATTATCCGCCCGGTGAGGCAGGCGAAGAAGGAGG
ACTGGCCGAGCCAGCCAACATTGTCGTCGGAGAGGAGAGGCCAGGAGGTA
GAGTGACGAGTCGGACGGGCCACCAAGAAGGCGGGAAGAAGGAGGAGCGA
GGAAAGCGCAGAAATTTCCTTGGACAGGAGGAGCAAGATACGGATTCCTC
GCCCTCCGTGGTGTCCGTCGCCCAAGATGTTCATGATCGCGAGGGTTTCC
GGGGATTCTACAGGGGCGTTTGCTACGCCGCTGGCCAGAGCGGGGTCGAG
AAGGCGGCGTACTTTTACGGGTACGGGTGGCTAAAGGCGTTGTCATTGCG
GATCGGGGGCGGGCGAGAGTTAAGCACGACGACGGACCTGGTGCTTGGAT
ACCTAGCGGAGGCGCTTCACCTTCCCTTCACGATACCCATCGAGGTCGTC
GTCACAAAGATCGTTACGTCGCGAGAGAAGACTAACGCCTTTGCGGTGAT
CCAGGGCATTCTCGCTGAGAGTGGTCCCGCTGGATTTTTCAAGGGTATCA
AGGTCGTCGTCACAAAGATCGTTACGTCGCGAGAGAAGACTAACGCCTTT
GCGGTGATCCAGGGCATTCTCGCTGAGAGTGGTCCCGCTGGATTTTTCAA
GGGTATCAAGGCGTATATTATCCTGTGCCTTAAGCCGGCCATCCAGTACA
CCATTTTTAACCGGCTCAAAACGCTCACGCTTGCCTGCCGACGCGGTGCG
GGTGGATCGAGCGGGCCAGCGGAGCTCACTGCTCTACAGGCGTATATTAT
CCTGTGCCTTAAGCCGGCCATCCAGTACACCATTTTTAACCGGCTCAAAA
CGCTCACGCTTGCCTGCCGACGCGGTGCGGGTGGATCGAGCGGGCCAGCG
GAGCTCACTGCTCTACAGGCGTTCGTGATCGGGGCTGCCTCACGCGCCGT
TGCGACGGTTGTCGTGTTCCCGTACATCCGAGCGAAAGTGATCATGATGA
CCCGGCGTTCGTGATCGGGGCTGCCTCACGCGCCGTTGCGACGGTTGTCG
TGTTCCCGTACATCCGAGCGAAAGTGATCATGATGACCCGGGCGGAGGAG
GGGGCTGGTGGAGAAGGCGAGAAGTCGACGTCTAGTGTTGCCAGTCTCGT
CTCCATTCTCAATGAAGGTGGAATATCATCCCTGTTCCAGGGCGGAGGAG
GGGGCTGGTGGAGAAGGCGAGAAGTCGACGTCTAGTGTTGCCAGTCTCGT
CTCCATTCTCAATGAAGGTGGAATATCATCCCTGTTCCAGGGCATCACCC
CGGAGATCACTCGTGGAGTACTCTCGTCCGCGCTCATGCTCATGGTGAAG
GAAAAGATACACTCGATGGTAAGAGGCGCTATCGTGGGCCAGAAAAAATG
AGGCATCACCCCGGAGATCACTCGTGGAGTACTCTCGTCCGCGCTCATGC
TCATGGTGAAGGAAAAGATACACTCGATGGTAAGAGGCGCTATCGTGGGC
CAGAAAAAATGA
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