mRNA_H-elongata_contig114293.1141.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig114293.1141.1 vs. uniprot
Match: UPI001939B116 (E3 SUMO-protein ligase KIAA1586-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939B116) HSP 1 Score: 67.8 bits (164), Expect = 8.690e-10 Identity = 51/199 (25.63%), Postives = 92/199 (46.23%), Query Frame = 1
Query: 1 VDESTDVSDSNNRLMFLRYENDFQPHVVMFALALMHEVHKESNTVERARGCQIADVIT--KRTLAAKGVTAQKIIGFASDRAAAMTGSRSGVATILAQKQSYRLLVHLVAHRQSLGAQAACLEEALTKEVDAVVTAVNRIFSHSSVRKGNFNIIQVANNMGGKSLPTLKGIFMTRFLSRGTAVGSSCANYHAIILSMNE 591
VDESTD+S+S +++++Y F E + + + C + ++T + + K++ F SD AA M G R+GVA L ++ + + H VAHR+ LG E L ++++ ++ + +FS S++ + F I A + L + R+LSR A+ + NY ++I E
Sbjct: 202 VDESTDISESECLILYVKYRVSF-------------EYKTRFGGIIQLKSCDASSIVTAIEEFYKKYRLELDKMVMFTSDGAAVMLGRRNGVAAKLKERIPHLVQQHCVAHREDLGIADTWKEVKLLQDIETLMRTIYSMFSRSTINRCKFQDIAAACENEAIAFKPLNEV---RWLSRHFALQAIIKNYDSLIAYFEE 384
BLAST of mRNA_H-elongata_contig114293.1141.1 vs. uniprot
Match: UPI001CF31B43 (zinc finger protein 862-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF31B43) HSP 1 Score: 65.1 bits (157), Expect = 7.340e-9 Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 1
Query: 196 GVTAQKIIGFASDRAAAMTGSRSGVATILAQKQSYRLLVHLVAHRQSLGAQAACLEEALTKEVDAVVTAVNRIFSHSSVRKGNFNIIQVANNMGGKSLPTLKGIFMTRFLSRGTAVGSSCANYHAIILSMNEEA 597
GV KI+GF SD AA M GSR+GVAT L + + L VH +AHR +L + L + +T++N F HSS+R +Q A + + ++K + R+L+ +A+ S + +I+ ++ EA
Sbjct: 250 GVPLSKIVGFGSDGAAVMLGSRNGVATKLREDSPFMLNVHCIAHRFALCTGDGASKVTLVRGFVDTLTSLNYFFEHSSLRCSKLQSVQEALE---EPVLSVKEVHSVRWLAFFSALDSVFRCWVSIVTTLGNEA 380
BLAST of mRNA_H-elongata_contig114293.1141.1 vs. uniprot
Match: UPI001CF2640A (zinc finger protein 862-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF2640A) HSP 1 Score: 63.9 bits (154), Expect = 1.530e-8 Identity = 43/134 (32.09%), Postives = 71/134 (52.99%), Query Frame = 1
Query: 196 GVTAQKIIGFASDRAAAMTGSRSGVATILAQKQSYRLLVHLVAHRQSLGAQAACLEEALTKEVDAVVTAVNRIFSHSSVRKGNFNIIQVANNMGGKSLPTLKGIFMTRFLSRGTAVGSSCANYHAIILSMNEEA 597
GV KI+GF SD AA + GSR+GVAT L + + L VH +AHR +L + L + +T++N F HSS+R +Q A + + ++K + R+L+ +A+ S + +I+ ++ EA
Sbjct: 12 GVPLSKIVGFGSDGAAVLLGSRNGVATKLREDSPFMLNVHCIAHRFALCTGDGASKVTLVRGFVDTLTSLNYFFEHSSLRCSKLQSVQEALE---EPVLSVKEVHSVRWLAFFSALDSVFRCWVSIVTTLGNEA 142
BLAST of mRNA_H-elongata_contig114293.1141.1 vs. uniprot
Match: UPI000C764E12 (zinc finger BED domain-containing protein 5-like n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI000C764E12) HSP 1 Score: 63.9 bits (154), Expect = 1.850e-8 Identity = 40/132 (30.30%), Postives = 74/132 (56.06%), Query Frame = 1
Query: 4 DESTDVSDSNNRLMFLRYENDFQPHVVMFALALMHEVHKESNTVERARGCQIADVITKRTLAAKGVTAQKIIGFASDRAAAMTGSRSGVATILAQKQSYRLLVHLVAHRQSLGAQA--ACLEEALTKEVDAV 393
DESTD+S+ L+F+R+ +D +++ L + E+ S ++ +++ K T ++ +K++GF +D A AM GSRSG+AT++ QK + H + HRQ+L ++ CL+E + ++ V
Sbjct: 175 DESTDISNCCQLLVFVRFLDD---NIIKEELLISRELETTSKGIDVLN--TVSEYFQKHT-----ISWEKLVGFCTDGAPAMLGSRSGLATLVKQKNPKAITTHCIIHRQALASKTLPGCLKETMQLAINVV 296
BLAST of mRNA_H-elongata_contig114293.1141.1 vs. uniprot
Match: A0A8J6HQ77_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HQ77_TENMO) HSP 1 Score: 60.8 bits (146), Expect = 2.060e-7 Identity = 47/137 (34.31%), Postives = 69/137 (50.36%), Query Frame = 1
Query: 4 DESTDVSDSNNRLMFLRYENDFQPHVVMFALALMHEVHKESNTVERARGCQIADVITKRTLAAKGVTAQKIIGFASDRAAAMTGSRSGVATILAQKQSYRLLVHLVAHRQSLGAQAACLEEALTKEVDAVVTAVNRI 414
DESTDVS L+F+R+ ND F L+ E+ + +G + D I++ L G+ QK+ GF +D A AM GSRSG+A ++ +K + H V HRQ+L A+ L E + + VN I
Sbjct: 175 DESTDVSQCCQLLVFIRFLNDNNT----FKEELLFSQKLETTS----QGTDVMDAISQY-LEKHGLMWQKLAGFCTDGAPAMLGSRSGLAALIKKKNPSAITTHCVIHRQALAAKT--LPECFAITMKTAIKVVNFI 300
BLAST of mRNA_H-elongata_contig114293.1141.1 vs. uniprot
Match: UPI001F135BFE (SCAN domain-containing protein 3-like n=2 Tax=Vanessa cardui TaxID=171605 RepID=UPI001F135BFE) HSP 1 Score: 56.2 bits (134), Expect = 7.560e-6 Identity = 43/137 (31.39%), Postives = 70/137 (51.09%), Query Frame = 1
Query: 4 DESTDVSDSNNRLMFLRYENDFQPHVVMFALALMHEVHKESNTVERARGCQIADVITKRTLAAKGVTAQKIIGFASDRAAAMTGSRSGVATILAQKQSYRLLVHLVAHRQSLGAQAACLEEALTKEVDAVVTAVNRI 414
DESTDVS L+F+R+ D + MF L+ ++ + +G + + I++ + G+ +++ GF +D A AM GSRSG+A ++ K + H V HRQ+L A+ L E T + + VN I
Sbjct: 175 DESTDVSQCCQLLVFIRFLEDNK----MFKEELLFSQELKTTS----QGADVMNAISQY-MEEHGLMWERLAGFCTDGAPAMLGSRSGLAALVKTKNPSAITTHCVIHRQALAAKT--LPECFTIALKTAIKVVNFI 300
BLAST of mRNA_H-elongata_contig114293.1141.1 vs. uniprot
Match: A0A437BLF7_CHISP (Uncharacterized protein n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A437BLF7_CHISP) HSP 1 Score: 56.2 bits (134), Expect = 7.980e-6 Identity = 43/137 (31.39%), Postives = 70/137 (51.09%), Query Frame = 1
Query: 4 DESTDVSDSNNRLMFLRYENDFQPHVVMFALALMHEVHKESNTVERARGCQIADVITKRTLAAKGVTAQKIIGFASDRAAAMTGSRSGVATILAQKQSYRLLVHLVAHRQSLGAQAACLEEALTKEVDAVVTAVNRI 414
DESTDVS L+F+R+ D + MF L+ ++ + +G + + I++ + G+ +++ GF +D A AM GSRSG+A ++ K + H V HRQ+L A+ L E T + + VN I
Sbjct: 101 DESTDVSQCCQLLVFIRFLEDNK----MFKEELLFSQELKTTS----QGADVMNAISQY-MEEHGLMWERLAGFCTDGAPAMLGSRSGLAALVKTKNPSAITTHCVIHRQALAAKT--LPECFTIALKTAIKVVNFI 226
BLAST of mRNA_H-elongata_contig114293.1141.1 vs. uniprot
Match: UPI00077A6EA3 (uncharacterized protein KIAA1586-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A6EA3) HSP 1 Score: 54.7 bits (130), Expect = 2.230e-5 Identity = 56/203 (27.59%), Postives = 94/203 (46.31%), Query Frame = 1
Query: 4 DESTDVSDSNNRLMFLRYENDFQPHVVMFALALMHEVHKESNTVERARGCQIADVITKRTLAAKGVTAQKIIGFASDRAAAMTGSRSGVATILAQKQSYRLLVHLVAHRQSLGAQAACLEEALTKEVDAVVTAVNRIFSHSSVRKGNFNIIQV---ANNMGGKSLPT----LKGIFMTRFLSRGTAVGSSCANYHAIILSMNE 591
DE TD+S + F+++ N V L + +V K+S + I +TK+ L G+ QK+ ASDRAA MTG RSGVA L + S + H + H+ +L + K ++ V + ++F +S R F +Q+ + N+ KS LK + R+LS A + +Y A++ ++ +
Sbjct: 149 DEFTDISVMEILMTFIQFFNSKTEKVEKHFL-FVEDVLKDSTSANAETNFNI---LTKK-LEDCGLQIQKLSSVASDRAAVMTGERSGVAARLKKVNSKVIAFHCLCHKLALACTDTTSDIDYIKNIELWVRQLWKMFENSPKRMAIFIKVQIEIKSVNLLDKSKKIVRKKLKKVCQARWLSFHAATSAIFDDYLAVLHTLRQ 346
BLAST of mRNA_H-elongata_contig114293.1141.1 vs. uniprot
Match: A0A4Y2BJ68_ARAVE (General transcription factor II-I repeat domain-containing protein 2A n=4 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2BJ68_ARAVE) HSP 1 Score: 53.9 bits (128), Expect = 3.030e-5 Identity = 52/200 (26.00%), Postives = 91/200 (45.50%), Query Frame = 1
Query: 1 VDESTDVSDSNNRLMFLRYENDFQPHVVMFALA-LMHEVHKESNTVERARGCQIADVITKRTLAAKGVTAQKIIGFASDRAAAMTGSRSGVATILAQKQSYRLLV-HLVAHRQSLGAQAACLEEALTKEVDAVVTAVNRIFSHSSVRKGNFNIIQVANNMGGKSLPTLKGIFMTRFLSRGTAVGSSCANYHAIILSMNEE 594
+DES D+ D+ ++F+RY P + L L + H E IA+ + K L G+ KI+ A+D A +MTG GV +IL +K + +L H + H ++L AQ E + + ++ V+ +N I + + + + ++ ++ L K R+LSRG + S I +NE+
Sbjct: 23 IDESCDIKDTTQVILFVRYITSQGPKEELLGLLPLSGQTHGED----------IANAVQK-CLEDNGIDINKIVSIATDGARSMTGIHRGVTSILQKKINLEILTFHCIIHEEALCAQTFPAE--IVEVMNLVIKIINSILAKALYHRQFKDFLEEIDSQFSDLLLHNK----VRWLSRGNVLQRSALCLSEIKTFLNEK 205
BLAST of mRNA_H-elongata_contig114293.1141.1 vs. uniprot
Match: A0A6G0Y1Y6_APHCR (Protein ZBED8-like (Fragment) n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0Y1Y6_APHCR) HSP 1 Score: 54.3 bits (129), Expect = 3.390e-5 Identity = 46/139 (33.09%), Postives = 72/139 (51.80%), Query Frame = 1
Query: 4 DESTDVSDSNNRLMFLRYENDFQPHVVMFALALMHEVHKESNTVERARGCQIADVITKRTLAAKGVTAQKIIGFASDRAAAMTGSRSGVATILAQKQSYRLLVHLVAHRQSLGAQAACLEEALTKEVDAVVTAVNRIFS 420
DESTDVS L+F+R+ +D + + L L+ E+ T +R+ +I + ++ + +K+ GF D A A+ GSRSG+AT++ +K L H V HRQ+L ++ L E L + V VN I S
Sbjct: 150 DESTDVSQCCQLLVFVRFLDD--DNTIKEELLLLQEL---GTTSKRSDVMKIINEYFEK----HDIMWEKLAGFCMDGAPAILGSRSGLATLVKEKNCSALTTHCVIHRQALASKK--LPEELMYTLKQSVKMVNAIKS 277 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114293.1141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig114293.1141.1 >prot_H-elongata_contig114293.1141.1 ID=prot_H-elongata_contig114293.1141.1|Name=mRNA_H-elongata_contig114293.1141.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp VDESTDVSDSNNRLMFLRYENDFQPHVVMFALALMHEVHKESNTVERARGback to top mRNA from alignment at H-elongata_contig114293:275..871- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig114293.1141.1 ID=mRNA_H-elongata_contig114293.1141.1|Name=mRNA_H-elongata_contig114293.1141.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=597bp|location=Sequence derived from alignment at H-elongata_contig114293:275..871- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig114293:275..871- >mRNA_H-elongata_contig114293.1141.1 ID=mRNA_H-elongata_contig114293.1141.1|Name=mRNA_H-elongata_contig114293.1141.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig114293:275..871- (Himanthalia elongata Himel1 dioecious)back to top |