mRNA_H-elongata_contig114134.1129.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig114134.1129.1
Unique Name	mRNA_H-elongata_contig114134.1129.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

[Close]

BLAST of mRNA_H-elongata_contig114134.1129.1 vs. uniprot
Match: B3VMZ7_FUCSE (Heat shock protein 70 (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=B3VMZ7_FUCSE)

HSP 1 Score: 551 bits (1419), Expect = 8.540e-194
Identity = 296/362 (81.77%), Postives = 298/362 (82.32%), Query Frame = 1

Query:   37 VPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDMRSNTRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCLTP------------------------------------------------------------AAILSGQDKSDKLNSLLLLDVTPLGLGLETAGGVMTTLIKRNTTVPAKKSQVFSTYADNQPGVLIQVYEGERTMTRDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK 942
            V AYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDMRSN+RALRRLRTACERAKRTLS+STQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCL P                                                            A ILSGQDKSDKLNSLLLLDVTPLGLGLETAGGVMTTLIKRNTTVPAKKSQVFSTYADNQPGVLIQVYEGERTMTRDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKE KITITNDK
Sbjct:    4 VRAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDMRSNSRALRRLRTACERAKRTLSASTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCLAPVEKVVKDAKMSKGQIHEVVLVGGSTRIPKIQQMLVDYFNGKEPCKSINPDEAVAYGATVQAGILSGQDKSDKLNSLLLLDVTPLGLGLETAGGVMTTLIKRNTTVPAKKSQVFSTYADNQPGVLIQVYEGERTMTRDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKETKITITNDK 365

[Close]

BLAST of mRNA_H-elongata_contig114134.1129.1 vs. uniprot
Match: A0A6H5JJT8_9PHAE (HSP70 protein n=10 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5JJT8_9PHAE)

HSP 1 Score: 555 bits (1431), Expect = 1.850e-193
Identity = 298/373 (79.89%), Postives = 306/373 (82.04%), Query Frame = 1

Query:    4 LEPQVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDMRSNTRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCLTP------------------------------------------------------------AAILSGQDKSDKLNSLLLLDVTPLGLGLETAGGVMTTLIKRNTTVPAKKSQVFSTYADNQPGVLIQVYEGERTMTRDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK 942
            L  +VKNAV+TVPAYFNDSQRQATKDAGSI+GLNVMRIINEPTAAAIAYGLDKKGEE+NVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDM +N RALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCL+P                                                            AAILSG+DKSDKL+SLLLLDVTPLG GLETAGGVMTTLIKRNTTVP KKSQVFSTYADNQPGVLIQVYEGERTMTRD NLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK
Sbjct:  138 LGKEVKNAVITVPAYFNDSQRQATKDAGSISGLNVMRIINEPTAAAIAYGLDKKGEERNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDMSTNQRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCLSPVEKVVKDAKMSKGQIHEVVLVGGSTRIPKVQQMLSAFFNGKEPCKSINPDEAVAYGATVQAAILSGKDKSDKLDSLLLLDVTPLGQGLETAGGVMTTLIKRNTTVPVKKSQVFSTYADNQPGVLIQVYEGERTMTRDCNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK 510

[Close]

BLAST of mRNA_H-elongata_contig114134.1129.1 vs. uniprot
Match: A0A6H5KQY2_9PHAE (HSP70 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY2_9PHAE)

HSP 1 Score: 544 bits (1402), Expect = 5.240e-188
Identity = 292/373 (78.28%), Postives = 304/373 (81.50%), Query Frame = 1

Query:    4 LEPQVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDMRSNTRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCLTP------------------------------------------------------------AAILSGQDKSDKLNSLLLLDVTPLGLGLETAGGVMTTLIKRNTTVPAKKSQVFSTYADNQPGVLIQVYEGERTMTRDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK 942
            L  +VKNAV+TVPAYFNDSQRQATKDAGSI+GLNVMRIINEPTAAAIAYGLDKKG+E+NVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRK RKDM +N RALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCL P                                                            AAILSG+DKSDKL+SLLLLDVTPLGLGLETAGGVM+ LIKRNTTVP KKSQVFSTYADNQPGVLIQV+EGER+MTRD NLLGKF+LDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK
Sbjct:  138 LGKEVKNAVITVPAYFNDSQRQATKDAGSISGLNVMRIINEPTAAAIAYGLDKKGQERNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKNRKDMSTNQRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCLAPVEKVVKDAKMSKGQIHEVVLVGGSTRIPKVQQMLSEFFNGKEPCKSINPDEAVAYGATVQAAILSGKDKSDKLDSLLLLDVTPLGLGLETAGGVMSVLIKRNTTVPVKKSQVFSTYADNQPGVLIQVFEGERSMTRDCNLLGKFSLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK 510

[Close]

BLAST of mRNA_H-elongata_contig114134.1129.1 vs. uniprot
Match: A0A835Z7M3_9STRA (Heat shock protein 70 n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M3_9STRA)

HSP 1 Score: 541 bits (1393), Expect = 1.330e-187
Identity = 285/373 (76.41%), Postives = 302/373 (80.97%), Query Frame = 1

Query:    4 LEPQVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDMRSNTRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCLTP------------------------------------------------------------AAILSGQDKSDKLNSLLLLDVTPLGLGLETAGGVMTTLIKRNTTVPAKKSQVFSTYADNQPGVLIQVYEGERTMTRDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK 942
            L  +VKNAV+TVPAYFNDSQRQATKDAG+I+GLNVMRIINEPTAAAIAYGLDKKG E+N+LIFDLGGGTFDVS+LTIEEGIFEVKATAGDTHLGGEDFDNRMVDYF+QEFK+KFRKD+ +N RALRRLRTACERAKRTLSSSTQAHIEIDSLFEG+DFNSTITRARFEDMN DYF+KC+ P                                                            AAILSGQDKS+KL+ LLLLDVTPL LGLETAGGVMTTLIKRNTTVPAKKSQ FSTYADNQPGVLIQVYEGER MTRDNNLLGKFNLDGIPPMPRGQPQI+VTFDIDANGILNVHAVEKSTGKENKITITNDK
Sbjct:  138 LGKEVKNAVITVPAYFNDSQRQATKDAGAISGLNVMRIINEPTAAAIAYGLDKKGRERNILIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFVQEFKKKFRKDLTTNQRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGVDFNSTITRARFEDMNMDYFRKCMEPVEKVLRDSKLSKSQVNEVVLVGGSTRIPKIQSLLSDFFNGKELCKSINPDEAVAFGATVQAAILSGQDKSEKLSDLLLLDVTPLSLGLETAGGVMTTLIKRNTTVPAKKSQTFSTYADNQPGVLIQVYEGERAMTRDNNLLGKFNLDGIPPMPRGQPQIDVTFDIDANGILNVHAVEKSTGKENKITITNDK 510

[Close]

BLAST of mRNA_H-elongata_contig114134.1129.1 vs. uniprot
Match: A0A7S2UY12_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY12_9STRA)

HSP 1 Score: 529 bits (1362), Expect = 1.860e-183
Identity = 282/374 (75.40%), Postives = 301/374 (80.48%), Query Frame = 1

Query:    4 LEPQVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGE-EKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDMRSNTRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCLTP------------------------------------------------------------AAILSGQDKSDKLNSLLLLDVTPLGLGLETAGGVMTTLIKRNTTVPAKKSQVFSTYADNQPGVLIQVYEGERTMTRDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK 942
            L  +VKNAVVTVPAYFNDSQRQATKDAG+I+GLNV+RIINEPTAAAIAYGLDKK E EKNVLIFDLGGGTFDVS+LTIEEGIFEVKATAGDTHLGGEDFDNRMVDYF+QEFK+KF+KD+RSN RALRRLRTACERAKRTLSSS QAHIEIDSLFEG+DFNST+TRARFED+N DYF+KC+ P                                                            AAILSGQD+S+KL+ LLLLDVTPL LGLETAGGVMT LIKRNTTVPAKKSQ FSTYADNQPGVLIQVYEGER+MTRDNNLLGKFNLDGIPPMPRGQPQI+VTFDIDANGILNV AVEKSTGKENKITITNDK
Sbjct:  138 LGKEVKNAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKAEQEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFIQEFKKKFKKDLRSNQRALRRLRTACERAKRTLSSSAQAHIEIDSLFEGVDFNSTLTRARFEDLNMDYFRKCMEPVEKVLRDSKLSKSQVHEVVLVGGSTRIPKVQSMLMDFFNGKEPCKSINPDEAVAFGATVQAAILSGQDQSEKLSDLLLLDVTPLSLGLETAGGVMTVLIKRNTTVPAKKSQTFSTYADNQPGVLIQVYEGERSMTRDNNLLGKFNLDGIPPMPRGQPQIDVTFDIDANGILNVSAVEKSTGKENKITITNDK 511

[Close]

BLAST of mRNA_H-elongata_contig114134.1129.1 vs. uniprot
Match: A0A7S2R704_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2R704_9STRA)

HSP 1 Score: 530 bits (1366), Expect = 5.010e-183
Identity = 284/369 (76.96%), Postives = 296/369 (80.22%), Query Frame = 1

Query:   16 VKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDMRSNTRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCLTP------------------------------------------------------------AAILSGQDKSDKLNSLLLLDVTPLGLGLETAGGVMTTLIKRNTTVPAKKSQVFSTYADNQPGVLIQVYEGERTMTRDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK 942
            VKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEE+NVLIFDLGGGTFDVS+LTIEEGIFEVKATAGDTHLGGEDFDNRMVD F QEFKRKF+KD+R N RALRRLRTACERAKRTLSSSTQAH+EIDSLFEGIDFNSTITRA+FEDMN DYF+KC+ P                                                            AAILSGQDKS+KL  LLLLDVTPL LGLETAGGVMT LIKRNTTVPAKKSQ FSTYADNQPGVLIQVYEGER+MTRD NLLGKFNLDGIPPMPRGQPQI+VTFDIDANGILNV+AVEKSTGKE KITITNDK
Sbjct:  180 VKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVDSFTQEFKRKFKKDLRQNQRALRRLRTACERAKRTLSSSTQAHLEIDSLFEGIDFNSTITRAKFEDMNMDYFRKCMEPVEKVLRDSKVSKGQVHEVVLVGGSTRIPKIQKMLSDFFGGKEPCKSINPDEAVAYGATVQAAILSGQDKSEKLQDLLLLDVTPLSLGLETAGGVMTALIKRNTTVPAKKSQTFSTYADNQPGVLIQVYEGERSMTRDCNLLGKFNLDGIPPMPRGQPQIDVTFDIDANGILNVNAVEKSTGKEQKITITNDK 548

[Close]

BLAST of mRNA_H-elongata_contig114134.1129.1 vs. uniprot
Match: A0A7S4S792_9STRA (Hypothetical protein (Fragment) n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S4S792_9STRA)

HSP 1 Score: 523 bits (1347), Expect = 6.700e-183
Identity = 278/373 (74.53%), Postives = 298/373 (79.89%), Query Frame = 1

Query:    4 LEPQVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDMRSNTRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCLTP------------------------------------------------------------AAILSGQDKSDKLNSLLLLDVTPLGLGLETAGGVMTTLIKRNTTVPAKKSQVFSTYADNQPGVLIQVYEGERTMTRDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK 942
            L  +VKNAV+TVPAYFNDSQRQATKDAGSI+GLNV+RIINEPTAAAIAYGLDKKG+EKNVLIFDLGGGTFDVS+LTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQ+FKR+ RKDM  N R+LRRLRTACERAKRTLSSSTQAHIEIDSLF+GIDFNSTITRARFED+  DYF+KC+ P                                                            AAILSG DKS+KL+ LLLLDVTPL LGLETAGGVMTTLIKRNTTVPAKK+Q FSTYADNQPGVLIQV+EGER+MTRDNNLLGKFNLDGIPPMPRGQPQI+V FDIDANGILNV A+EKSTGKENKITITNDK
Sbjct:   95 LGKEVKNAVITVPAYFNDSQRQATKDAGSISGLNVLRIINEPTAAAIAYGLDKKGDEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQDFKRRHRKDMSKNQRSLRRLRTACERAKRTLSSSTQAHIEIDSLFDGIDFNSTITRARFEDLCMDYFKKCMDPCEKVLRDSKISKNNVHEVVLVGGSTRIPKIQQMLSEFFNGKEPCKSINPDEAVAYGATVQAAILSGADKSEKLSELLLLDVTPLSLGLETAGGVMTTLIKRNTTVPAKKTQTFSTYADNQPGVLIQVFEGERSMTRDNNLLGKFNLDGIPPMPRGQPQIDVCFDIDANGILNVSALEKSTGKENKITITNDK 467

[Close]

BLAST of mRNA_H-elongata_contig114134.1129.1 vs. uniprot
Match: K8Z7L5_NANGC (Heat shock protein 70 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z7L5_NANGC)

HSP 1 Score: 521 bits (1343), Expect = 1.110e-182
Identity = 277/374 (74.06%), Postives = 296/374 (79.14%), Query Frame = 1

Query:    1 LLEPQVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDMRSNTRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCLTP------------------------------------------------------------AAILSGQDKSDKLNSLLLLDVTPLGLGLETAGGVMTTLIKRNTTVPAKKSQVFSTYADNQPGVLIQVYEGERTMTRDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK 942
            ++  +VKNAV+TVPAYFNDSQRQATKDAG+IAGLNV+RIINEPTAAAIAYGLDKKG EK VLIFDLGGGTFDVS+LTIEEGIFEVKATAGDTHLGGEDFDNRMV+Y   EFK+K RKD+ SN RALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFN+TITRARFED+N DYF+KC+ P                                                            AAILSG +KS+KL+ LLLLDVTPL LGLETAGGVMTTLIKRNTTVPAKKSQ FSTYADNQPGVLIQVYEGER MT+DNNLLGKFNLDGIPPMPRGQPQI+VTFDIDANGILNVHAVEK TGKENKITITNDK
Sbjct:   31 IIGKEVKNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGAEKTVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVEYCTAEFKKKHRKDITSNQRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNTTITRARFEDLNMDYFRKCMEPVEKVLRDAKIAKSQVDEVVLVGGSTRIPKVQTMLIDFFNGKEPCKSINPDEAVAYGATVQAAILSGHNKSEKLSDLLLLDVTPLSLGLETAGGVMTTLIKRNTTVPAKKSQTFSTYADNQPGVLIQVYEGERAMTKDNNLLGKFNLDGIPPMPRGQPQIDVTFDIDANGILNVHAVEKGTGKENKITITNDK 404

[Close]

BLAST of mRNA_H-elongata_contig114134.1129.1 vs. uniprot
Match: F0XYC4_AURAN (Heat shock protein 70 n=7 Tax=Pelagomonadales TaxID=54409 RepID=F0XYC4_AURAN)

HSP 1 Score: 526 bits (1356), Expect = 3.880e-182
Identity = 280/373 (75.07%), Postives = 298/373 (79.89%), Query Frame = 1

Query:    4 LEPQVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDMRSNTRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCLTP------------------------------------------------------------AAILSGQDKSDKLNSLLLLDVTPLGLGLETAGGVMTTLIKRNTTVPAKKSQVFSTYADNQPGVLIQVYEGERTMTRDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK 942
            L  +VKNAVVTVPAYFNDSQRQATKDAGSIAGLNV+RIINEPTAAAIAYGLDKKG+E+NVLIFDLGGGTFDVS+LTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFL EFKRKF+KD+++N RALRRLRTACERAKRTLSSSTQAH+EIDSLFEGIDFNSTITRARFED+N DYF+KC+ P                                                            AAILSG D S+KL+ LLLLDVTPL LGLETAGGVMT LIKRNTTVPAKKSQ FSTYADNQPGVLIQV+EGER+MT+DNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNV AVEKSTGKE KITI NDK
Sbjct:  138 LGKEVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAAIAYGLDKKGDERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLTEFKRKFKKDLKTNQRALRRLRTACERAKRTLSSSTQAHLEIDSLFEGIDFNSTITRARFEDLNMDYFRKCMDPVEKVMRDAKLSKSQVNEVVLVGGSTRIPKIQSLLSDFFNGKEPCKSINPDEAVAYGATVQAAILSGADSSEKLSDLLLLDVTPLSLGLETAGGVMTALIKRNTTVPAKKSQTFSTYADNQPGVLIQVFEGERSMTKDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVSAVEKSTGKEQKITIKNDK 510

[Close]

BLAST of mRNA_H-elongata_contig114134.1129.1 vs. uniprot
Match: A0A7S3KZX9_9STRA (Hypothetical protein n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S3KZX9_9STRA)

HSP 1 Score: 526 bits (1356), Expect = 7.370e-182
Identity = 281/373 (75.34%), Postives = 298/373 (79.89%), Query Frame = 1

Query:    4 LEPQVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRKFRKDMRSNTRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDMNQDYFQKCLTP------------------------------------------------------------AAILSGQDKSDKLNSLLLLDVTPLGLGLETAGGVMTTLIKRNTTVPAKKSQVFSTYADNQPGVLIQVYEGERTMTRDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEKSTGKENKITITNDK 942
            L  +VKNAVVTVPAYFNDSQRQATKDAG+IAGLNV+RIINEPTAAAIAYGLD+KG EKNVLIFDLGGGTFDVS+LTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKR+ RKDM  N RALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFED+  DYF+KC+ P                                                            AAILSG DKS+KL+ LLLLDVTPL LGLETAGGVMTTLIKRNTTVPAKK+Q FSTYADNQPGVLIQV+EGER+MT+DNNLLGKFNLDGIPPMPRGQPQI+VTFDIDANGILNV A+EKSTGKENKITITNDK
Sbjct:  166 LAKEVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDQKGAEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVDYFLQEFKRRHRKDMSENQRALRRLRTACERAKRTLSSSTQAHIEIDSLFEGIDFNSTITRARFEDLCMDYFKKCMEPCEKVLRDAKISKNQVDEVVLVGGSTRIPKIQSLLSEFFNGKEPCKSINPDEAVAYGATVQAAILSGADKSEKLSELLLLDVTPLSLGLETAGGVMTTLIKRNTTVPAKKTQTFSTYADNQPGVLIQVFEGERSMTKDNNLLGKFNLDGIPPMPRGQPQIDVTFDIDANGILNVSAIEKSTGKENKITITNDK 538

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig114134.1129.1 vs. uniprot

BLAST of mRNA_H-elongata_contig114134.1129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
B3VMZ7_FUCSE	8.540e-194	81.77	Heat shock protein 70 (Fragment) n=1 Tax=Fucus ser...	[more]
A0A6H5JJT8_9PHAE	1.850e-193	79.89	HSP70 protein n=10 Tax=Phaeophyceae TaxID=2870 Rep...	[more]
A0A6H5KQY2_9PHAE	5.240e-188	78.28	HSP70 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ...	[more]
A0A835Z7M3_9STRA	1.330e-187	76.41	Heat shock protein 70 n=3 Tax=Tribonema minus TaxI...	[more]
A0A7S2UY12_9STRA	1.860e-183	75.40	Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa...	[more]
A0A7S2R704_9STRA	5.010e-183	76.96	Hypothetical protein n=3 Tax=Dictyochophyceae TaxI...	[more]
A0A7S4S792_9STRA	6.700e-183	74.53	Hypothetical protein (Fragment) n=3 Tax=Bacillario...	[more]
K8Z7L5_NANGC	1.110e-182	74.06	Heat shock protein 70 n=1 Tax=Nannochloropsis gadi...	[more]
F0XYC4_AURAN	3.880e-182	75.07	Heat shock protein 70 n=7 Tax=Pelagomonadales TaxI...	[more]
A0A7S3KZX9_9STRA	7.370e-182	75.34	Hypothetical protein n=6 Tax=Bacillariophyta TaxID...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig114134	contig	H-elongata_contig114134:1..1574 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	543.9
Seed ortholog evalue	5e-152
Seed eggNOG ortholog	2880.D8LI58
KEGG ko	ko:K03283
KEGG TC	1.A.33.1
KEGG Pathway	ko03040,ko04010,ko04141,ko04144,ko04213,ko04612,ko04915,ko05134,ko05145,ko05162,ko05164,ko05169,map03040,map04010,map04141,map04144,map04213,map04612,map04915,map05134,map05145,map05162,map05164,map05169
KEGG Module	M00353,M00355
GOs	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0015630,GO:0031982,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.	ATP binding
EggNOG OGs	COG0443@1,KOG0101@2759
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01009,ko03009,ko03029,ko03041,ko03051,ko03110,ko04131,ko04147,ko04516
Hectar predicted targeting category	other localisation
Exons	3
Model size	942
Cds size	942
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig114134.1129.1	prot_H-elongata_contig114134.1129.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig114134 1..1574 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929659.0291836-CDS-H-elongata_contig114134:0..396	1622929659.0291836-CDS-H-elongata_contig114134:0..396	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig114134 1..396 -
1691679109.0541127-CDS-H-elongata_contig114134:0..396	1691679109.0541127-CDS-H-elongata_contig114134:0..396	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig114134 1..396 -
1622929659.0449464-CDS-H-elongata_contig114134:719..938	1622929659.0449464-CDS-H-elongata_contig114134:719..938	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig114134 720..938 -
1691679109.0668874-CDS-H-elongata_contig114134:719..938	1691679109.0668874-CDS-H-elongata_contig114134:719..938	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig114134 720..938 -
1622929659.059804-CDS-H-elongata_contig114134:1247..1574	1622929659.059804-CDS-H-elongata_contig114134:1247..1574	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig114134 1248..1574 -
1691679109.0779865-CDS-H-elongata_contig114134:1247..1574	1691679109.0779865-CDS-H-elongata_contig114134:1247..1574	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig114134 1248..1574 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig114134:1..1574-
coding sequence from alignment at H-elongata_contig114134:1..1574-

protein sequence of mRNA_H-elongata_contig114134.1129.1

>prot_H-elongata_contig114134.1129.1 ID=prot_H-elongata_contig114134.1129.1|Name=mRNA_H-elongata_contig114134.1129.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=314bp
LLEPQVKNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAY
GLDKKGEEKNVLIFDLGGGTFDVSVLTIEEGIFEVKATAGDTHLGGEDFD
NRMVDYFLQEFKRKFRKDMRSNTRALRRLRTACERAKRTLSSSTQAHIEI
DSLFEGIDFNSTITRARFEDMNQDYFQKCLTPAAILSGQDKSDKLNSLLL
LDVTPLGLGLETAGGVMTTLIKRNTTVPAKKSQVFSTYADNQPGVLIQVY
EGERTMTRDNNLLGKFNLDGIPPMPRGQPQIEVTFDIDANGILNVHAVEK
STGKENKITITNDK

mRNA from alignment at H-elongata_contig114134:1..1574-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig114134.1129.1 ID=mRNA_H-elongata_contig114134.1129.1|Name=mRNA_H-elongata_contig114134.1129.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1574bp|location=Sequence derived from alignment at H-elongata_contig114134:1..1574- (Himanthalia elongata Himel1 dioecious)
CTTTTGGAACCGCAGGTGAAAAACGCGGTGGTTACCGTACCCGCGTACTT
TAACGACTCCCAGCGTCAGGCCACCAAGGACGCCGGTTCCATCGCCGGCC
TGAATGTTATGCGGATCATCAACGAGCCCACGGCCGCCGCCATCGCATAC
GGTCTCGACAAGAAGGGGGAAGAGAAGAACGTACTGATCTTCGACCTCGG
CGGGGGTACGTTCGATGTGTCAGTGCTGACGATCGAGGAGGGTATCTTCG
AGGTCAAGGCCACCGCGGGTGACACTCACTTGGGAGGCGAAGACTTCGAT
AACCGTATGGTGGACTACTTCTTGCAGGTAAATAAAAAAAATCGCATTAA
CGTAGATATATGTATGCCCTGGCAACCCCTCTCACGAAAGGATGACTGAA
AAAAAAGGCTTTTGTAGAAAACCGTTTGTTACTCTGGAATAATAGTGATG
CACAGCCTGAGTGCGGCGTGCGTCAAAGAGTTTATCTTGAAAATTATTCA
AAAAATCGTGGTAGGTTATATTACGCGTTCAGGGACAGGTGCCGTTCATT
TAAAAACCAATCGTGTGCTAATATTACTGTGATCTCGTGCCTTCTTTCGG
TAAATGGTTTGTTGTATTTGTCTTTCCTCTCCACAGGAGTTCAAGCGCAA
GTTCCGCAAGGACATGCGATCAAACACCCGCGCACTGCGACGTCTCCGCA
CGGCGTGCGAACGCGCAAAGCGTACGCTTTCGTCGTCGACCCAGGCGCAC
ATTGAGATCGACTCTCTTTTCGAGGGCATCGACTTTAACTCAACCATCAC
CCGCGCTAGGTTCGAGGACATGAACCAGGACTACTTCCAGAAGTGCCTGA
CTCCGGTGGAGAAGGTGGTGAAAGACGCGAAGATGTCGAAGGGTCAGATC
CACGAGGTGGTGCTGGTGGGCGGGTCCACCCGTATCCCCAAGATCCAGCA
GGCAAGGATGATTCCACGAGAGTTCCGGGAATAAGTTATAGCACCTCTAG
ATATATCAGCCTCTACCACTCAAATGTTGATGTTATACTTTGTAAAGTAC
TCATTAATCCCGTTCTTCCTTGCTCCATCTCTTACGCCCCGCAGATGCTG
GTGAACTACTTCAACGGCAAAGAGCCGTGCAAGTCCATCAACCCCGACGA
GGCCGTGGCCTATGGTGCCACGGTGCAGGCCGCCATCCTCTCGGGCCAGG
ACAAGTCTGACAAGCTGAACTCCCTTCTACTGCTGGACGTGACCCCTCTT
GGCCTCGGCCTGGAGACGGCCGGAGGGGTGATGACGACGCTCATTAAGCG
GAACACCACGGTGCCGGCGAAGAAGTCTCAGGTGTTCTCGACATACGCAG
ACAACCAACCGGGGGTGCTGATCCAGGTGTACGAGGGCGAGCGCACGATG
ACTCGCGACAATAATTTGCTGGGCAAGTTCAACCTGGACGGTATCCCGCC
CATGCCTCGCGGACAGCCGCAGATCGAGGTAACGTTCGACATCGACGCGA
ACGGTATCCTGAATGTGCACGCGGTGGAGAAGTCAACGGGCAAGGAGAAC
AAGATCACGATCACGAACGACAAG

Coding sequence (CDS) from alignment at H-elongata_contig114134:1..1574-

>mRNA_H-elongata_contig114134.1129.1 ID=mRNA_H-elongata_contig114134.1129.1|Name=mRNA_H-elongata_contig114134.1129.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1884bp|location=Sequence derived from alignment at H-elongata_contig114134:1..1574- (Himanthalia elongata Himel1 dioecious)
CTTTTGGAACCGCAGGTGAAAAACGCGGTGGTTACCGTACCCGCGTACTT
TAACGACTCCCAGCGTCAGGCCACCAAGGACGCCGGTTCCATCGCCGGCC
TGAATGTTATGCGGATCATCAACGAGCCCACGGCCGCCGCCATCGCATAC
GGTCTCGACAAGAAGGGGGAAGAGAAGAACGTACTGATCTTCGACCTCGG
CGGGGGTACGTTCGATGTGTCAGTGCTGACGATCGAGGAGGGTATCTTCG
AGGTCAAGGCCACCGCGGGTGACACTCACTTGGGAGGCGAAGACTTCGAT
AACCGTATGGTGGACTACTTCTTGCAGCTTTTGGAACCGCAGGTGAAAAA
CGCGGTGGTTACCGTACCCGCGTACTTTAACGACTCCCAGCGTCAGGCCA
CCAAGGACGCCGGTTCCATCGCCGGCCTGAATGTTATGCGGATCATCAAC
GAGCCCACGGCCGCCGCCATCGCATACGGTCTCGACAAGAAGGGGGAAGA
GAAGAACGTACTGATCTTCGACCTCGGCGGGGGTACGTTCGATGTGTCAG
TGCTGACGATCGAGGAGGGTATCTTCGAGGTCAAGGCCACCGCGGGTGAC
ACTCACTTGGGAGGCGAAGACTTCGATAACCGTATGGTGGACTACTTCTT
GCAGGAGTTCAAGCGCAAGTTCCGCAAGGACATGCGATCAAACACCCGCG
CACTGCGACGTCTCCGCACGGCGTGCGAACGCGCAAAGCGTACGCTTTCG
TCGTCGACCCAGGCGCACATTGAGATCGACTCTCTTTTCGAGGGCATCGA
CTTTAACTCAACCATCACCCGCGCTAGGTTCGAGGACATGAACCAGGACT
ACTTCCAGAAGTGCCTGACTCCGGAGTTCAAGCGCAAGTTCCGCAAGGAC
ATGCGATCAAACACCCGCGCACTGCGACGTCTCCGCACGGCGTGCGAACG
CGCAAAGCGTACGCTTTCGTCGTCGACCCAGGCGCACATTGAGATCGACT
CTCTTTTCGAGGGCATCGACTTTAACTCAACCATCACCCGCGCTAGGTTC
GAGGACATGAACCAGGACTACTTCCAGAAGTGCCTGACTCCGGCCGCCAT
CCTCTCGGGCCAGGACAAGTCTGACAAGCTGAACTCCCTTCTACTGCTGG
ACGTGACCCCTCTTGGCCTCGGCCTGGAGACGGCCGGAGGGGTGATGACG
ACGCTCATTAAGCGGAACACCACGGTGCCGGCGAAGAAGTCTCAGGTGTT
CTCGACATACGCAGACAACCAACCGGGGGTGCTGATCCAGGTGTACGAGG
GCGAGCGCACGATGACTCGCGACAATAATTTGCTGGGCAAGTTCAACCTG
GACGGTATCCCGCCCATGCCTCGCGGACAGCCGCAGATCGAGGTAACGTT
CGACATCGACGCGAACGGTATCCTGAATGTGCACGCGGTGGAGAAGTCAA
CGGGCAAGGAGAACAAGATCACGATCACGAACGACAAGGCCGCCATCCTC
TCGGGCCAGGACAAGTCTGACAAGCTGAACTCCCTTCTACTGCTGGACGT
GACCCCTCTTGGCCTCGGCCTGGAGACGGCCGGAGGGGTGATGACGACGC
TCATTAAGCGGAACACCACGGTGCCGGCGAAGAAGTCTCAGGTGTTCTCG
ACATACGCAGACAACCAACCGGGGGTGCTGATCCAGGTGTACGAGGGCGA
GCGCACGATGACTCGCGACAATAATTTGCTGGGCAAGTTCAACCTGGACG
GTATCCCGCCCATGCCTCGCGGACAGCCGCAGATCGAGGTAACGTTCGAC
ATCGACGCGAACGGTATCCTGAATGTGCACGCGGTGGAGAAGTCAACGGG
CAAGGAGAACAAGATCACGATCACGAACGACAAG