mRNA_H-elongata_contig11413.1128.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11413.1128.1 vs. uniprot
Match: A0A6H5KVG3_9PHAE (HECT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVG3_9PHAE) HSP 1 Score: 644 bits (1661), Expect = 1.480e-220 Identity = 309/361 (85.60%), Postives = 332/361 (91.97%), Query Frame = 1
Query: 1 LQVNRKNILEDSFAQVSAMNSGELRRWLRVQFVGEPGVDAGGLEREWFLMVCCALFDPSAGLFTPQPVNGAFAINPSSGLANELHFEYFRFTGRVLGKLLMEHSVAPFHLSLPILKHLLGLPVAFSDLEFADAELHRNLSWLRTNPGAASLGLDFTVTLESFGAREVADLVPGGKSINVTDENKEHYLQLRLKHHVLRSVHGQLWHLMRGFYEVIPSHLISVFDYQELELLLCGIPEIDVSEWKRHSRYLGDYRRMGEEHPVIKWFWEVVEEFSEEEKARFLQFCTGTSRLPPHGFKALQQSNDGSFRAFSLQSVSKRESAFPRAHTCFNKLDLPVYDNKKELEECLRLCICFELTGFTID 1083
++VNRKN+LEDSFAQVSAMN+GELRRWLRVQFVGEPGVDAGGLEREWF++VC ALFDPS GLFTPQP NGAFAINPSSG+ANE+H EYFRFTGRVLGKLLMEHSVAP+HLSLPILKH+LGLPVAFSDLEFADAEL+RNL WLR N GA SLGLDFTVTLESFG +EVA+L+PGGK I VTD NKE YL+LRLKH VL H QLWHLMRG Y+VIPSHLISVFDYQELELLLCGIPEIDVSEWKR SRYLGDYRR GE H VIKWFWEVVE FSE+EKAR LQFCTG+SRLP HGFKALQ SNDGSFRAFSLQS++KR+SAFPRAHTCFNKLDLP Y++KKELEECL LCICFELTGFTID
Sbjct: 819 IEVNRKNLLEDSFAQVSAMNAGELRRWLRVQFVGEPGVDAGGLEREWFMLVCSALFDPSTGLFTPQPGNGAFAINPSSGVANEMHLEYFRFTGRVLGKLLMEHSVAPYHLSLPILKHMLGLPVAFSDLEFADAELYRNLQWLRANSGAESLGLDFTVTLESFGVKEVAELLPGGKDITVTDGNKEEYLRLRLKHRVLDGTHSQLWHLMRGMYDVIPSHLISVFDYQELELLLCGIPEIDVSEWKRCSRYLGDYRRAGENHVVIKWFWEVVEAFSEDEKARLLQFCTGSSRLPAHGFKALQ-SNDGSFRAFSLQSITKRDSAFPRAHTCFNKLDLPTYESKKELEECLGLCICFELTGFTID 1178
BLAST of mRNA_H-elongata_contig11413.1128.1 vs. uniprot
Match: A0A835ZF82_9STRA (E3 ubiquitin-protein ligase NEDD4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF82_9STRA) HSP 1 Score: 434 bits (1117), Expect = 1.480e-148 Identity = 214/362 (59.12%), Postives = 267/362 (73.76%), Query Frame = 1
Query: 1 LQVNRKNILEDSFAQVSAMNSGELRRWLRVQFVGEPGVDAGGLEREWFLMVCCALFDPSAGLFTPQPVNGAFAINPSSGLANELHFEYFRFTGRVLGKLLMEHSVAPFHLSLPILKHLLGLPVAFSDLEFADAELHRNLSWLRTNPGAASLGLDFTVTLESFGAREVADLVPGGKSINVTDENKEHYLQLRLKHHVLRSVHGQLWHLMRGFYEVIPSHLISVFDYQELELLLCGIPEIDVSEWKRHSRYLGDYRRMGEEHPVIKWFWEVVEE-FSEEEKARFLQFCTGTSRLPPHGFKALQQSNDGSFRAFSLQSVSKRESAFPRAHTCFNKLDLPVYDNKKELEECLRLCICFELTGFTID 1083
++V R+++LEDSF+QV +M +GELRRWLRVQFVGEPGVDAGGLEREWF++V ALFDP AGLF P GAF INP+SGLAN++H EYFRFTGR +L S+A + FSDLE DAEL+R+L+WLRT+ A LGLDFTV E FG +EV +L P G + VTD NK YL+L L+H V+ + QLW L+ G +EV+P LI+VFDY ELE LLCGI EIDV +W+RH+ Y G+YRR+GE+HPV+ WFW++V+E F+ EE+AR LQF TG+S +PPHGFKALQ SNDG FR FS+ S K ++ +PRAHTCFNKLDLP+Y+++ ELEECL I F TGF ID
Sbjct: 77 IEVRREHLLEDSFSQVMSMRTGELRRWLRVQFVGEPGVDAGGLEREWFMLVAEALFDPQAGLFCAAPATGAFDINPASGLANDMHLEYFRFTGRSAARL----SLAS---------------ITFSDLELVDAELYRHLNWLRTH-SADGLGLDFTVVSEHFGLKEVTELAPDGAHVAVTDANKHEYLKLMLRHRVVGRIEPQLWQLICGLFEVVPPQLIAVFDYCELEHLLCGIQEIDVDDWRRHTTYHGEYRRLGEKHPVVAWFWQLVQEDFTAEERARLLQFITGSSCVPPHGFKALQ-SNDGQFRRFSICSARKADTHYPRAHTCFNKLDLPLYESRAELEECLSTAIAFACTGFDID 417
BLAST of mRNA_H-elongata_contig11413.1128.1 vs. uniprot
Match: A0A7S2SP99_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP99_9STRA) HSP 1 Score: 422 bits (1084), Expect = 1.340e-140 Identity = 204/359 (56.82%), Postives = 258/359 (71.87%), Query Frame = 1
Query: 7 VNRKNILEDSFAQVSAMNSGELRRWLRVQFVGEPGVDAGGLEREWFLMVCCALFDPSAGLFTPQPVNGAFAINPSSGLANELHFEYFRFTGRVLGKLLMEHSVAPFHLSLPILKHLLGLPVAFSDLEFADAELHRNLSWLRTNPGAASLGLDFTVTLESFGAREVADLVPGGKSINVTDENKEHYLQLRLKHHVLRSVHGQLWHLMRGFYEVIPSHLISVFDYQELELLLCGIPEIDVSEWKRHSRYLGDYRRMGEEHPVIKWFWEVVEEFSEEEKARFLQFCTGTSRLPPHGFKALQQSNDGSFRAFSLQSVSKRESAFPRAHTCFNKLDLPVYDNKKELEECLRLCICFELTGFTID 1083
V R +L DS Q+ + L R LRV F EPGVDAGGL REWFL+V LFDP+ GLF Q + A++INP SGL NE H YF F GR +GK L+EH P H SLP+LKH+L +P+ FSDLEF DAE+++NL +LR N GA +L LDF VTLE G R+ LVP ++VTDENK+ YLQL K+ +L S+ QLWHL+ G YEVIP L+S FDYQELELL+ GIP IDV +WKRHSRY+G +R +GE H V++WFWEVV++FS+EE+AR LQF TGTSRLP GFKAL+ ++DG+FR F+L + + +PR+HTCFN++DLP Y +K+ELE L L I E+TGF +D
Sbjct: 272 VRRDCLLVDSHGQLMDIEPQFLTRRLRVNFHDEPGVDAGGLLREWFLLVSQQLFDPAHGLFICQGEDQAYSINPVSGLCNEAHLHYFHFAGRFIGKTLLEHQTLPVHFSLPLLKHMLSIPITFSDLEFVDAEMYQNLLFLRDNQGAEALCLDFMVTLEHLGMRQTHSLVPNAAEVDVTDENKDDYLQLLFKYRMLDSISSQLWHLLTGLYEVIPRDLLSAFDYQELELLISGIPSIDVEDWKRHSRYVGLFRSLGENHSVVQWFWEVVQDFSQEERARLLQFSTGTSRLPAQGFKALE-AHDGNFRLFTLSGMPTTDLLYPRSHTCFNRIDLPTYSSKEELEGYLSLVINMEITGFQMD 629
BLAST of mRNA_H-elongata_contig11413.1128.1 vs. uniprot
Match: I2CRW4_NANGC (E3 ubiquitin-protein ligase NEDD4 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRW4_NANGC) HSP 1 Score: 412 bits (1058), Expect = 1.720e-139 Identity = 206/367 (56.13%), Postives = 272/367 (74.11%), Query Frame = 1
Query: 1 LQVNRKNILEDSFAQVSAMNSGELRRWLRVQFVGEPGVDAGGLEREWFLMVCCALFDPSAGLFTPQPVNGAFAINPSSGLA---NELHFEYFRFTGRVLGKLLMEHSVAPFHLSLPILKHLLGLPVAFSDLEFADAELHRNLSWL-RTNPGAA-SLGLDFTVTLESFGAREVADLVPGGKSINVTDENKEHYLQLRLKHHVLRSVHGQLWHLMRGFYEVIPSHLISVFDYQELELLLCGIPEIDVSEWKRHSRYLGDYRRMGEEHPVIKWFWEVVEE-FSEEEKARFLQFCTGTSRLPPHGFKALQQSNDGSFRAFSLQSVSKRESAFPRAHTCFNKLDLPVYDNKKELEECLRLCICFELTGFTID 1083
L VNR +LEDSF Q+ +++ E+RRW+RVQFV E GVDAGGLEREWF++V AL DP+ GLF Q +GA++INP++ A EL +Y+ F GRVLGK ++EH P LSLP+LKH+LG P+ FSDLE D +L+R+L+++ R +P +L LDFTVT E+ G +EV +L PGGK + +T +N+ YL L +++ +L V Q+WHL+RGFYEV+P L+SVFDYQEL+LL+ G+P IDV +WKRH+ YLG Y+R+GE H VI+WFWEVVE +EE + R LQF TG +P GFKALQ SNDG+FR F++QSVS ++ FPRAHTCFNKLDLP+Y++ +ELE L L I E+TGFTID
Sbjct: 62 LDVNRAKLLEDSFNQLISLHPSEMRRWMRVQFVEEAGVDAGGLEREWFVLVLQALTDPALGLFFQQ--HGAYSINPTAVAAIGDRELALQYYYFAGRVLGKAVLEHQTLPLALSLPLLKHILGTPLTFSDLELLDPDLYRSLAYIHRCSPEEVEALHLDFTVTFEAVGRQEVRELKPGGKDVALTAQNRREYLVLMMRYQLLDGVKHQVWHLLRGFYEVVPKSLLSVFDYQELQLLMSGMPVIDVQDWKRHTEYLGRYQRLGERHRVIRWFWEVVEHRLNEESRVRLLQFITGGCSVPAQGFKALQ-SNDGNFRRFNIQSVSTQDCVFPRAHTCFNKLDLPLYNSLEELEGYLTLVINIEITGFTID 425
BLAST of mRNA_H-elongata_contig11413.1128.1 vs. uniprot
Match: A0A812T5Q5_SYMMI (UPL1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812T5Q5_SYMMI) HSP 1 Score: 408 bits (1049), Expect = 7.000e-138 Identity = 204/361 (56.51%), Postives = 259/361 (71.75%), Query Frame = 1
Query: 1 LQVNRKNILEDSFAQVSAMNSG-ELRRWLRVQFVGEPGVDAGGLEREWFLMVCCALFDPSAGLFTPQPVNGAFA----INPSSGLANELHFEYFRFTGRVLGKLLMEHSVAPFHLSLPILKHLLGLPVAFSDLEFADAELHRNLSWLRTNP-GAASLGLDFTVTLESFGAREVA-DLVPGGKSINVTDENKEHYLQLRLKHHVLRSVHGQLWHLMRGFYEVIPSHLISVFDYQELELLLCGIPEIDVSEWKRHSRYLGDYRRMGEEHPVIKWFWEVVEEFSEEEKARFLQFCTGTSRLPPHGFKALQQSNDGSFRAFSLQSVSKRESAFPRAHTCFNKLDLPVYDNKKELEECLRLCICFE 1062
++V R N+LEDSF Q+ A+ SG +L +W+R+ FVGE G+DAGGLEREWFL+V LFDPS GLFT A A INP S +A H +YF+F GR+L K +ME ++ P LSLP+ K LL +P+ FSDLEF D +L+RNL WLR P G LGL F V + +G + +L GG I VTD NKE +L+LRL+H +L S+ QL HL++GFYEV+P L+ VFDYQELELL+CG+P ID+ +W RH+ Y+G+Y R+G H V+KWFWEVV FS EE+ R LQF TG SRLP GFKALQ SNDG++R F+LQS+ K +SA+PRAHTCFNKLDLPVYD+K+ELE L + I E
Sbjct: 84 IEVRRSNVLEDSFQQMMAIPSGVDLHKWMRIHFVGEMGIDAGGLEREWFLLVVERLFDPSTGLFTCSAAGDALAGTYHINPISHVAQSNHLKYFQFAGRLLAKAVMEQNLIPAMLSLPLRKQLLSMPITFSDLEFVDLDLYRNLCWLRDTPEGVEHLGLVFAVDYQ-YGQHSLTYELKAGGAQIMVTDYNKEEFLELRLRHRMLDSIKPQLEHLLKGFYEVLPPELLCVFDYQELELLMCGLPNIDMDDWIRHTEYMGEYNRLGPRHKVVKWFWEVVSSFSNEERIRLLQFTTGCSRLPAQGFKALQ-SNDGNYRKFNLQSIRKEDSAYPRAHTCFNKLDLPVYDSKRELEAYLSVVINME 442
BLAST of mRNA_H-elongata_contig11413.1128.1 vs. uniprot
Match: A0A7S4D9I7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9I7_HETAK) HSP 1 Score: 376 bits (965), Expect = 9.490e-124 Identity = 183/362 (50.55%), Postives = 249/362 (68.78%), Query Frame = 1
Query: 1 LQVNRKNILEDSFAQVSAMNSGELRRWLRVQFVG-EPGVDAGGLEREWFLMVCCALFDPSAGLFTPQPVNGAFAINPSSGLANELHFEYFRFTGRVLGKLLMEHSVAPFHLSLPILKHLLGLPVAFSDLEFADAELHRNLSWLRTNPGAASLGLDFTVTLESFGAREVADLVPGGKSINVTDENKEHYLQLRLKHHVLRSVHGQLWHLMRGFYEVIPSHLISVFDYQELELLLCGIPEIDVSEWKRHSRYLGDYRRMGEEHPVIKWFWEVVEEFSEEEKARFLQFCTGTSRLPPHGFKALQQSNDGSFRAFSLQSVSKRESAFPRAHTCFNKLDLPVYDNKKELEECLRLCICFELTGFTID 1083
L+V R N+LEDSF Q SA++ E+ WL+V+F+ E G+DAGGLEREWF ++ ALFDP+ GL+ GA+A +P++ A+ LH EYFRF+GR++GK LM+H P L+ P+L+ +LG P++ DLE +D L R+L +LR PG L L F+V E G +L PGG VTD NK YL+LRL+H VL SV QL + G +EV+P +SVFD ELELLLCG+P++DV +W H+RY G Y R G HPV++WFW + + E+AR LQFCTG++R+ HGFK L S+DG++R F++ S+SK E FPRAHTCFNKLDLP+Y++KKEL E L L + ++TGF++D
Sbjct: 186 LEVARGNLLEDSFTQFSAVDPDEVHLWLKVEFLDDEHGIDAGGLEREWFSLLFRALFDPARGLWALDAAGGAYAPSPAAPHAHALHREYFRFSGRLMGKALMQHVPVPVRLAAPVLQQILGAPLSLGDLEASDPALFRSLDYLRRRPGTEELHLTFSVPEERLGRTVEVELEPGGCQRAVTDANKHRYLELRLRHAVLGSVEPQLEAFLGGLFEVVPYWFLSVFDAAELELLLCGLPDVDVDDWAAHTRYHGAYARRGARHPVVRWFWACLRALAPAERARLLQFCTGSARVSAHGFKTLH-SSDGTYREFNITSISKEECPFPRAHTCFNKLDLPIYESKKELNEYLTLLLQSDITGFSMD 546
BLAST of mRNA_H-elongata_contig11413.1128.1 vs. uniprot
Match: F0YLG4_AURAN (HECT domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLG4_AURAN) HSP 1 Score: 362 bits (928), Expect = 1.530e-118 Identity = 174/363 (47.93%), Postives = 244/363 (67.22%), Query Frame = 1
Query: 1 LQVNRKNILEDSFAQVSAMNSGELRRWLRVQFVGEPGVDAGGLEREWFLMVCCALFDPSAGLFTPQPVNG-AFAINPSSGLANELHFEYFRFTGRVLGKLLMEHSVAPFHLSLPILKHLLGLPVAFSDLEFADAELHRNLSWLRTNPGAASLGLDFTVTLESFGAREVADLVPGGKSINVTDENKEHYLQLRLKHHVLRSVHGQLWHLMRGFYEVIPSHLISVFDYQELELLLCGIPEIDVSEWKRHSRYLGDYRRMGEEHPVIKWFWEVV-EEFSEEEKARFLQFCTGTSRLPPHGFKALQQSNDGSFRAFSLQSVSKRESAFPRAHTCFNKLDLPVYDNKKELEECLRLCICFELTGFTID 1083
+ V R+N+LEDS ++ ++R+ R +F+ EPGVDAGG+ REWF +V LF+P L++ +N INPSSG+AN+ H YF FTGR+LGK L + + HL P+ KH+LG P+ +DLE DA+ + NL L+ LDFTVT + +G + DL P G + VT+ N + Y+QL++++ +L V Q+ L+ GFY+V+P L+SVFD+QELELLLCG+PEID+ +WKR++ Y GDY R G H V+KWFWEVV ++F EE KAR LQF TGTS +P GF+ALQ ND + R F++ S+ + S FP+AHTCFN++DLP+YD+KK+L++ L + I E TGF ID
Sbjct: 157 INVRRENLLEDSMEATESITQADMRKIFRFEFIAEPGVDAGGVAREWFQLVSDMLFNPDFALWSYSSINQMCMQINPSSGIANDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPLTVADLEQLDADTYANLCKLKDLDDVEVCCLDFTVTEDHWGTAQTVDLKPDGANCTVTNNNVDEYIQLQMRYRLLDRVKEQVKALLIGFYDVVPEALLSVFDFQELELLLCGLPEIDIEDWKRNTEYTGDYERKGASHKVVKWFWEVVVDDFDEEHKARLLQFVTGTSGVPAQGFRALQ-GNDNNIRKFTINSIPETVSVFPKAHTCFNRIDLPLYDSKKKLKKFLTMAIQMEATGFDID 518
BLAST of mRNA_H-elongata_contig11413.1128.1 vs. uniprot
Match: A0A6G0XX96_9STRA (HECT domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX96_9STRA) HSP 1 Score: 358 bits (919), Expect = 9.560e-118 Identity = 176/362 (48.62%), Postives = 247/362 (68.23%), Query Frame = 1
Query: 1 LQVNRKNILEDSFAQVSAMNSGELRRWLRVQFVGEPGVDAGGLEREWFLMVCCALFDPSAGLFTPQPVNGAFAINPSSGLANELHFEYFRFTGRVLGKLLMEHSVAPFHLSLPILKHLLGLPVAFSDLEFADAELHRNLSWLRTNPGAASLGLDFTVTLESFGAREVA-DLVPGGKSINVTDENKEHYLQLRLKHHVLRSVHGQLWHLMRGFYEVIPSHLISVFDYQELELLLCGIPEIDVSEWKRHSRYLGDYRRMGEEHPVIKWFWEVVEEFSEEEKARFLQFCTGTSRLPPHGFKALQQSNDGSFRAFSLQSVSKRESAFPRAHTCFNKLDLPVYDNKKELEECLRLCICFELTGFTID 1083
L+++R N+L +S Q+ + +L + LR++F+ EPGVDAGGLEREWF ++ +FD GLF+ ++ AF I P+S A+E H YF+ GR LG+ L E + HL+LP+ KH+LG+P+ FSDLEF D EL+ NL WL+ N G SL LDF+V + + + DL P G+ I VTDENK+ Y+ LR K ++ S+ QL L++G Y VIP ++SVFD+QELELL+CGIP+++V +WK H+ Y+G+ E VI+WFW+VVE+FS E++AR LQF TG++R+P GFK L NDG F++Q + K E +PRAHTCFN+LDLP+Y KK+LE L + I E+TGFTI+
Sbjct: 122 LEIDRANLLHNSCEQLLWASQDQLHQSLRIKFLNEPGVDAGGLEREWFTLMTEEIFDERTGLFSAC-MDNAFMIRPTSNEASEDHLMYFQAIGRFLGRALFEGMLIDAHLTLPMYKHILGIPITFSDLEFVDVELYNNLKWLKQNKGVESLCLDFSVNVAQYDKEPLTIDLCPNGRHIAVTDENKDEYIYLRFKWIMMTSISPQLASLIKGIYSVIPLEMLSVFDHQELELLMCGIPDVNVDDWKAHTTYIGEC-----EPQVIEWFWQVVEDFSTEQRARLLQFTTGSARVPVQGFKTLTM-NDGRICLFAIQGIRKEECLYPRAHTCFNRLDLPMYATKKDLETALNMVIKMEVTGFTIE 476
BLAST of mRNA_H-elongata_contig11413.1128.1 vs. uniprot
Match: A0A1V9YVA8_9STRA (HECT E3 ubiquitin ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVA8_9STRA) HSP 1 Score: 361 bits (927), Expect = 1.260e-116 Identity = 175/362 (48.34%), Postives = 248/362 (68.51%), Query Frame = 1
Query: 1 LQVNRKNILEDSFAQVSAMNSGELRRWLRVQFVGEPGVDAGGLEREWFLMVCCALFDPSAGLFTPQPVNGAFAINPSSGLANELHFEYFRFTGRVLGKLLMEHSVAPFHLSLPILKHLLGLPVAFSDLEFADAELHRNLSWLRTNPGAASLGLDFTVTLESFGAREVA-DLVPGGKSINVTDENKEHYLQLRLKHHVLRSVHGQLWHLMRGFYEVIPSHLISVFDYQELELLLCGIPEIDVSEWKRHSRYLGDYRRMGEEHPVIKWFWEVVEEFSEEEKARFLQFCTGTSRLPPHGFKALQQSNDGSFRAFSLQSVSKRESAFPRAHTCFNKLDLPVYDNKKELEECLRLCICFELTGFTID 1083
L+++R N+L +S Q+ + +L + +R++F+ EPGVDAGGLEREWF ++ +FD S GLFT +F I +S A+E H YF+ GR LG+ L E + HLSLP+ KH+LG+P+ FSDLEF D +L+ NL WL+ N G SL LDF+V + +G + DL P G++I VTD+NK+ Y+ LR K ++ S+ QL L++G Y V+P+ L+SVFD+QELELL+CGIP+I+V++W+ H+ Y+GD + VI WFWE+VE+FS E++AR LQF TG++R+P GFK L NDG F++Q + K E +PRAHTCFN+LDLP+Y KK+LE L + I E+TGFTI+
Sbjct: 304 LEIDRTNLLHNSCEQLLWATTDQLHQSMRIKFLNEPGVDAGGLEREWFTLMTQEIFDDSTGLFTSCMGQNSFMIRATSNEASEDHLMYFQAIGRFLGRALFEGMLIDAHLSLPMYKHILGIPITFSDLEFIDVDLYNNLRWLKQNNGVESLCLDFSVNVAQYGGAPLTIDLCPNGRNIPVTDDNKDDYVYLRFKWIMMTSISYQLASLIKGMYSVVPAELLSVFDHQELELLMCGIPDINVADWRTHTTYIGDC-----DAQVIDWFWEIVEDFSTEQRARLLQFTTGSARVPVQGFKTLTM-NDGRICLFAIQGIKKEECLYPRAHTCFNRLDLPMYSTKKDLETALMMVIKMEVTGFTIE 659
BLAST of mRNA_H-elongata_contig11413.1128.1 vs. uniprot
Match: H3GYP7_PHYRM (Uncharacterized protein n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3GYP7_PHYRM) HSP 1 Score: 361 bits (927), Expect = 2.420e-116 Identity = 187/361 (51.80%), Postives = 252/361 (69.81%), Query Frame = 1
Query: 1 LQVNRKNILEDSFAQVSAMNSGELRRWLRVQFVGEPGVDAGGLEREWFLMVCCALFDPSAGLFTPQPVNG-AFAINPSSGLANELHFEYFRFTGRVLGKLLMEHSVAPFHLSLPILKHLLGLPVAFSDLEFADAELHRNLSWLRTNPGAASLGLDFTVTLESF-GAREVADLVPGGKSINVTDENKEHYLQLRLKHHVLRSVHGQLWHLMRGFYEVIPSHLISVFDYQELELLLCGIPEIDVSEWKRHSRYLGDYRRMGEEHPVIKWFWEVVEEFSEEEKARFLQFCTGTSRLPPHGFKALQQSNDGSFRAFSLQSVSKRESAFPRAHTCFNKLDLPVYDNKKELEECLRLCICFELTGFT 1077
++V+R+NIL +S Q+ + + LR++F+GE +DAGGLEREWF +V LFD + GLF V+ A+ INP+S A+ H YFR GR+LG+ L+E + HL+LP+LKHLLG+P++FSDLEF D E+H +L W++ N G +LGLDFTVT G E +L GGK I++TDENK+ Y+ LRL++ +L S QL HLM G +EVIP LI VFDYQELEL+LCG+P IDV +WK H++ + + EE ++ WFWE+VE FS+EE+AR LQF TG+SR+P GFKAL S DG F+L++V E A+PRAHTCFN++DLP+Y +KKELE+ L L I E+TGFT
Sbjct: 327 MRVHRENILVESMEQLLGVQMEHIHMPLRIEFIGEVAIDAGGLEREWFSLVTERLFDETIGLFMCAHVDSLAYVINPNSVEASADHLLYFRGAGRLLGRALLEGQLMKAHLALPVLKHLLGVPISFSDLEFFDQEVHNSLKWMKENDGVDALGLDFTVTNRKLNGEVETIELKEGGKDIDLTDENKQEYIYLRLRYIMLDSYAEQLQHLMAGVFEVIPQELILVFDYQELELVLCGVPSIDVDDWKAHTQVSDE---LSEE--LLTWFWEIVEAFSDEERARLLQFTTGSSRVPVQGFKALT-SYDGRICHFTLKAVPFPEHAYPRAHTCFNRIDLPLYKSKKELEDVLSLVINMEVTGFT 681 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11413.1128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11413.1128.1 >prot_H-elongata_contig11413.1128.1 ID=prot_H-elongata_contig11413.1128.1|Name=mRNA_H-elongata_contig11413.1128.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=362bp LQVNRKNILEDSFAQVSAMNSGELRRWLRVQFVGEPGVDAGGLEREWFLMback to top mRNA from alignment at H-elongata_contig11413:399..5469+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11413.1128.1 ID=mRNA_H-elongata_contig11413.1128.1|Name=mRNA_H-elongata_contig11413.1128.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5071bp|location=Sequence derived from alignment at H-elongata_contig11413:399..5469+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11413:399..5469+ >mRNA_H-elongata_contig11413.1128.1 ID=mRNA_H-elongata_contig11413.1128.1|Name=mRNA_H-elongata_contig11413.1128.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2172bp|location=Sequence derived from alignment at H-elongata_contig11413:399..5469+ (Himanthalia elongata Himel1 dioecious)back to top |