mRNA_H-elongata_contig113824.1103.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig113824.1103.1 vs. uniprot
Match: A0A6H5KMR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR4_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 1.940e-11 Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 4 IRINSDSTGALALAKNRRYNPHAKDVSRRFKLLEELVKSGTITVSHKRTEHMLADIFTKYLGIVLFRNFMAQI 222
+ INSDSTGAL +A+N ++ K V+ R+ + ELV+ G IT+ H+ +EH LADI TKY+ F + + QI
Sbjct: 586 VPINSDSTGALTVARNAMHSQRTKHVALRYFFIRELVRQGQITLHHRPSEHQLADIATKYIPKHRFASIIQQI 658
BLAST of mRNA_H-elongata_contig113824.1103.1 vs. uniprot
Match: A0A2X0LH58_9BASI (BZ3500_MvSof-1268-A1-R1_Chr11-2g03469 protein n=1 Tax=Microbotryum saponariae TaxID=289078 RepID=A0A2X0LH58_9BASI) HSP 1 Score: 53.5 bits (127), Expect = 3.090e-7 Identity = 26/69 (37.68%), Postives = 45/69 (65.22%), Query Frame = 1
Query: 1 PIRINSDSTGALALAKNRRYNPHAKDVSRRFKLLEELVKSGTITVSHKRTEHMLADIFTKYLGIVLFRN 207
P+++ D+ GA+ALAKN + ++ + R + + V+ GTI V + T+ M+ADIFTK LG ++F++
Sbjct: 10 PVQLYGDNQGAIALAKNPTLHHRSRHIHIREHFVRDQVRLGTIQVDYVDTKTMVADIFTKALGPLVFKS 78
BLAST of mRNA_H-elongata_contig113824.1103.1 vs. uniprot
Match: A0A642V942_9ASCO (Uncharacterized protein n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642V942_9ASCO) HSP 1 Score: 50.4 bits (119), Expect = 2.280e-6 Identity = 25/75 (33.33%), Postives = 42/75 (56.00%), Query Frame = 1
Query: 1 PIRINSDSTGALALAKNRRYNPHAKDVSRRFKLLEELVKSGTITVSHKRTEHMLADIFTKYLGIVLFRNFMAQIE 225
P++I S++ G+ ++A+N Y+ + R + E VK I + H T+ MLADIFTK +G V+F ++
Sbjct: 8 PMKIYSNNNGSKSIAENPVYHHRTNHIDIRHYFIREKVKKQIIEIVHIDTQEMLADIFTKNIGRVVFEKLRDKMS 82
BLAST of mRNA_H-elongata_contig113824.1103.1 vs. uniprot
Match: A0A2X0L339_9BASI (BZ3500_MvSof-1268-A1-R1_C104g00574 protein n=1 Tax=Microbotryum saponariae TaxID=289078 RepID=A0A2X0L339_9BASI) HSP 1 Score: 52.8 bits (125), Expect = 3.740e-6 Identity = 26/68 (38.24%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 1 PIRINSDSTGALALAKNRRYNPHAKDVSRRFKLLEELVKSGTITVSHKRTEHMLADIFTKYLGIVLFR 204
P+++ D+ GA+ALAKN + ++ + R + + V+ GTI V + T+ M+ADIFTK LG ++F+
Sbjct: 414 PVQLYGDNQGAIALAKNPTLHHRSRHIRIREHFVRDQVRLGTIQVDYVDTKTMVADIFTKALGPLVFK 481
BLAST of mRNA_H-elongata_contig113824.1103.1 vs. uniprot
Match: A0A2X0LAK5_9BASI (BZ3500_MvSof-1268-A1-R1_Chr8-2g10054 protein n=2 Tax=Microbotryum saponariae TaxID=289078 RepID=A0A2X0LAK5_9BASI) HSP 1 Score: 52.8 bits (125), Expect = 3.760e-6 Identity = 26/68 (38.24%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 1 PIRINSDSTGALALAKNRRYNPHAKDVSRRFKLLEELVKSGTITVSHKRTEHMLADIFTKYLGIVLFR 204
P+++ D+ GA+ALAKN + ++ + R + + V+ GTI V + T+ M+ADIFTK LG ++F+
Sbjct: 459 PVQLYGDNQGAIALAKNPTLHHRSRHIRIREHFVRDQVRLGTIQVDYVDTKTMVADIFTKALGPLVFK 526
BLAST of mRNA_H-elongata_contig113824.1103.1 vs. uniprot
Match: A0A2X0KBQ5_9BASI (BZ3500_MvSof-1268-A1-R1_Chr10-2g02809 protein n=1 Tax=Microbotryum saponariae TaxID=289078 RepID=A0A2X0KBQ5_9BASI) HSP 1 Score: 52.8 bits (125), Expect = 3.810e-6 Identity = 26/68 (38.24%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 1 PIRINSDSTGALALAKNRRYNPHAKDVSRRFKLLEELVKSGTITVSHKRTEHMLADIFTKYLGIVLFR 204
P+++ D+ GA+ALAKN + ++ + R + + V+ GTI V + T+ M+ADIFTK LG ++F+
Sbjct: 638 PVQLYGDNQGAIALAKNPTLHHRSRHIRIREHFVRDQVRLGTIQVDYVDTKTMVADIFTKALGPLVFK 705
BLAST of mRNA_H-elongata_contig113824.1103.1 vs. uniprot
Match: A0A2X0L097_9BASI (BZ3500_MvSof-1268-A1-R1_Chr3-2g06215 protein n=1 Tax=Microbotryum saponariae TaxID=289078 RepID=A0A2X0L097_9BASI) HSP 1 Score: 52.8 bits (125), Expect = 3.870e-6 Identity = 26/68 (38.24%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 1 PIRINSDSTGALALAKNRRYNPHAKDVSRRFKLLEELVKSGTITVSHKRTEHMLADIFTKYLGIVLFR 204
P+++ D+ GA+ALAKN + ++ + R + + V+ GTI V + T+ M+ADIFTK LG ++F+
Sbjct: 1007 PVQLYGDNQGAIALAKNPTLHHRSRHIRIREHFVRDQVRLGTIQVDYVDTKTMVADIFTKALGPLVFK 1074
BLAST of mRNA_H-elongata_contig113824.1103.1 vs. uniprot
Match: UPI001039F20B (uncharacterized protein LOC114402162 n=1 Tax=Glycine soja TaxID=3848 RepID=UPI001039F20B) HSP 1 Score: 51.6 bits (122), Expect = 9.370e-6 Identity = 23/68 (33.82%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 19 DSTGALALAKNRRYNPHAKDVSRRFKLLEELVKSGTITVSHKRTEHMLADIFTKYLGIVLFRNFMAQI 222
DS A+ LA N ++ +K + + + ELV+S T+ + H +++H +ADIFTK L ++ F +F+ ++
Sbjct: 309 DSKSAIYLASNPAHHERSKHIDIDYHFIRELVQSNTLKLVHVKSQHQVADIFTKPLMLLAFSSFIRKL 376
BLAST of mRNA_H-elongata_contig113824.1103.1 vs. uniprot
Match: A0A2X0MLY2_9BASI (BZ3500_MvSof-1268-A1-R1_Chr6-2g08569 protein n=1 Tax=Microbotryum saponariae TaxID=289078 RepID=A0A2X0MLY2_9BASI) HSP 1 Score: 51.6 bits (122), Expect = 1.000e-5 Identity = 26/68 (38.24%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 1 PIRINSDSTGALALAKNRRYNPHAKDVSRRFKLLEELVKSGTITVSHKRTEHMLADIFTKYLGIVLFR 204
P+++ D+ GA+ALAKN + + + R + + V+ GTI V + T+ M+ADIFTK LG ++F+
Sbjct: 1792 PVQLYGDNQGAIALAKNPTLHHRSHHIRIREHFVRDQVRLGTIQVDYVDTKTMVADIFTKALGPLVFK 1859
BLAST of mRNA_H-elongata_contig113824.1103.1 vs. uniprot
Match: A0A225VVV9_9STRA (Gag-pol Polyprotein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VVV9_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 1.260e-5 Identity = 22/73 (30.14%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 4 IRINSDSTGALALAKNRRYNPHAKDVSRRFKLLEELVKSGTITVSHKRTEHMLADIFTKYLGIVLFRNFMAQI 222
I + D+ G LA+++ ++ + ++ L + VK G + +S+ RT M+AD FTK LG++ F++F ++
Sbjct: 250 ITVFEDNQGGQHLAESKAVTQRSRHIDTKYHWLRQKVKEGDVHISYYRTSEMIADHFTKGLGVIKFKHFRDEL 322 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig113824.1103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig113824.1103.1 >prot_H-elongata_contig113824.1103.1 ID=prot_H-elongata_contig113824.1103.1|Name=mRNA_H-elongata_contig113824.1103.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp PIRINSDSTGALALAKNRRYNPHAKDVSRRFKLLEELVKSGTITVSHKRTback to top mRNA from alignment at H-elongata_contig113824:515..751- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig113824.1103.1 ID=mRNA_H-elongata_contig113824.1103.1|Name=mRNA_H-elongata_contig113824.1103.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=237bp|location=Sequence derived from alignment at H-elongata_contig113824:515..751- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig113824:515..751- >mRNA_H-elongata_contig113824.1103.1 ID=mRNA_H-elongata_contig113824.1103.1|Name=mRNA_H-elongata_contig113824.1103.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=474bp|location=Sequence derived from alignment at H-elongata_contig113824:515..751- (Himanthalia elongata Himel1 dioecious)back to top |