mRNA_H-elongata_contig11334.1075.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11334.1075.1 vs. uniprot
Match: D7FRA9_ECTSI (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA9_ECTSI) HSP 1 Score: 614 bits (1584), Expect = 1.220e-213 Identity = 319/536 (59.51%), Postives = 366/536 (68.28%), Query Frame = 1
Query: 1 ITILSCCQAVFVDLDQKYVKVRRITPNGDGQLVFGDTIKVVFGRLLIATGVRPRRIGDS--ALDGVSKGLQGSCFCSRHPDLSGSPLEFTCPDRFGFGSVHYVRDLGDSCKLVQAMKRVEVDGQDTCKDPVVLVGGGFITCDVAAAIATHYPGMPLVMVMPGEDVMSSTGFGKDICHFYEKQLARAGVVFAKGYRVNRLWGIEEEGSFPTLERTSQGSSLKKTLPRTFGPADPHFTDCRGVVLLKKETGEKVWLAARFVVLGIGSIPNSELFRNILALSRDGGIVTDSSLCASHPSGDIFAAGDVACAPVPLAGYEESTSSPEITKVVRFEHVNTARDMGKLAAKAMLGGIDADEQYDPVPYMYSRLLDLSWKFFGFARGETCVLGVENFPVSRTFGAFWVFKGRIVGAFLEADPRCGVDYSATLERIAREQPPVLSIKHLKKCPLEKILSDPYCLTPPKLDIGEFHADIDKSSIEEAFHTFAVANDKVKREDMSAVMKDLGADWDEDELADVLEALDPSDSGFVLLTDFVRWWSN 1602
ITILS CQAV VDLDQK++KV+R+T + +G+LVFGDTIKVV+GRLLIATG RPR+I D +LD +SKGLQGSC C+RHPD+ GSPL T PDRFGFGSVHY+RD GD+ KLV AM RVE DGQDTCK+PVVL+GGGFI+C+VAAA+ATH PGM LVMVMPGEDVMSS+GFGK++CHFYEKQLAR GV FAKGYRVNRLWGIEEEG FPTLER+ QGSS+KKT PRTFGPADPHFTDCRGVVL +TGEKVWL ARFVV+GIGS+PNS+LF L LS DGGI+TDS L SHPSGD+FAAGDVAC P DP GVD+SA LER+ARE+P VLSIK L+KCPLEK+L +P+CL PPKL +GEFHAD D++SIEEAF A KR DM+++M++LGADWDEDEL D L ALDPSDSG V +DFV WWSN
Sbjct: 67 ITILSRCQAVSVDLDQKFLKVKRVTAS-NGELVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCCCTRHPDVDGSPLACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQDTCKEPVVLIGGGFISCEVAAAVATHCPGMQLVMVMPGEDVMSSSGFGKEVCHFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSSMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKVWLLARFVVVGIGSVPNSDLFLKSLVLSEDGGIITDSYLRTSHPSGDVFAAGDVACVP-------------------------------------------------------------------------------------------------------EDPSSGVDHSAILERMARERPAVLSIKRLRKCPLEKLLDNPHCLEPPKLGVGEFHADTDETSIEEAFRKRAGGASTAKRADMASIMQELGADWDEDELEDALRALDPSDSGSVNFSDFVEWWSN 498
BLAST of mRNA_H-elongata_contig11334.1075.1 vs. uniprot
Match: A0A7S4A4F3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4F3_9STRA) HSP 1 Score: 294 bits (753), Expect = 3.190e-87 Identity = 190/547 (34.73%), Postives = 283/547 (51.74%), Query Frame = 1
Query: 97 VFGDTIKVVFGRLLIATGVRPRRIGDSAL---DGVSKGLQGSCFCSRHPDLSGSPLE-------------------FTCPDRFGFGSVHYVRDLGDSCKLVQAMKRVEVDGQDTCKDPVVLVGGGFITCDVAAAIATHYPGMPLVM--------VMPG---EDVMSSTGF--GKDICHFYEKQLARAGVVFAKGYRVNRLWGIEEEGSFPTLERTSQGSSLKKTLPRTFGPAD-PHFTDCRGVVLLKKETGEKVWLAARFVVLGIGSIPNSELFRNILALSRDGGIVTDSSLCASHPSGDIFAAGDVACAPVP--------LAGYEESTSSPEITKVVRFEHVNTARDMGKLAAKAMLGGIDADEQYDPVPYMYSRLLDLSWKFFGFARGETCVLGVENFPVSRTFGAFWVFKGRIVGAFLEADPRCGVDYSATL-ERIAREQPPVLSIKHLKKCPLEKILSDPYCLTPPKLDIGEFHADIDKSSIEEAFHTFAVANDKVKREDMSAVMKDLGADWDEDELADVLEALDPSDSGFVLLTDFVRWWSN 1602
+ GD ++ + +L+IATG R + + D D S + D++ +P GFGSVHY+RD+GD+ K+ +A+ E DGQ+TC DPVV+VGGG +T ++AA IA + G + + +MP ED+ G KD+ FYE+QL + GV F + +R RLW ++E G FPT+E SL++T PR F P +F+ CRG+V+ + E+ W+AA+ V+L +G PNS++F + L L+ D I D++ SH SGD+FA GDVA P+P L Y+++ S+ + + G ++ +GG + +DPVP + S++LDL W F+G GE LG + R FG FWV R+VG FLE G D T+ E+IA +P + + + E L+DP + PP+L GEF+A++D I AF + + + K + M +M+DLGADWD +E + L ALDP S V L F WW N
Sbjct: 104 ITGDEDEITYEKLIIATGARAKVLDDQPYLWQDKHSDVVDNGSIEEGGEDIACAPAXXXXXXXXXXXPAPRIRPWCLQADKNCGFGSVHYLRDIGDAAKVSEAVSMKEADGQETCSDPVVIVGGGILTMELAAKIA-RFRGQKVPVNVVLSRDRIMPKVFREDIAPEAGSLGAKDVAEFYERQLVKCGVKFIREHRCLRLWDVDESGEFPTME--GPAISLQRTRPRRFEPLQGEYFSTCRGIVVENNHSAERSWIAAKCVILCLGDEPNSQVF-SFLDLADDSSIKVDATCRTSHSSGDVFAVGDVASYPLPRSKERCMRLPHYQQAFSTAVYVAHQCIDAMKQPSRPGTRDSRRSIGG----DPFDPVPCITSQVLDLDWVFYGRNVGECVPLGFDG-NSDRYFGCFWVEDMRVVGCFLEG----GSDEEKTICEKIAEMRPRLTRMHKFRSLECEDFLADPLGMEPPELGPGEFNAELDAKYIAIAFDKYG-RDGQAKTQAMGDLMRDLGADWDAEEEKEALRALDPLGSNQVSLECFTEWWLN 636
BLAST of mRNA_H-elongata_contig11334.1075.1 vs. uniprot
Match: D7FZW4_ECTSI (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW4_ECTSI) HSP 1 Score: 262 bits (669), Expect = 8.040e-76 Identity = 172/433 (39.72%), Postives = 225/433 (51.96%), Query Frame = 1
Query: 196 KGLQG----SCFCSRHPDLSGSPLEFTCPDRFGFGSVHYVRDLGDSCKLVQAMKRVE----VDGQDTCKDPVVLVGGGFITCDVAAAIATHYPGMPLVMVMPGEDVMSSTGFGKDICHFYEKQLARAGVVFAKGYRVNRLWGIEEEGSFPTLERTSQGSSLKKTLPRTFGPADPHFTDCRGVVLLKKETGEKVWLAARFVVLGIGSIPNSELFRNILALSRDGGIVTDSSL--CASHPSGD----------------IFAAGDVACAPVPLAGYEESTSSPEITKVVRFEHVNTARDMGKLAAKAMLG--------------GIDAD-------EQYDPVPYMYSRLLDLSWKFFGFARGETCVLGVENFPVSRTFGAFWVFKGRIVGAFLEADPRCGVDYSATLERIAREQPPVLSIKHLKKCPLEKILSDP 1353
K LQG +CFC RH DL G L+ P+ +G GS HY+RD+GD KLV+A+ V G + V LVGGG + +VAAAI THYPG+ +++M G +M F +++ FYE++L +AGV K RLWG+EE+G F TL G + FGPA FT+CRGVVL E + + AR V++GIG++PNSELFR L +S DGG++ D+ PS D I+AAGDVA P+ L G+ VR EH+ ARDM AA+ M+G G D Y PVP SR L LSW+F+G A GE VLG F +RTFGAFWV K R+VGAFLE ++ + ++ R +P V S + LK L L DP
Sbjct: 130 KRLQGDQDSACFCVRHSDLRGPKLDK--PEAYGLGSAHYLRDVGDCIKLVKALSTVPSGGGAGGGTGDANTVALVGGGVLCMEVAAAIVTHYPGVRPILLMSGSRLMPDF-FNQEMSDFYEEKLKQAGVRLEKNVTAERLWGLEEQGEFDTLG----GRRVH------FGPAPRGFTECRGVVLRNTEDC-LIHVPARSVIIGIGAVPNSELFRGKLEMSEDGGVLVDAQCRTAVQPPSEDGGGGGIDVGSAAPPRPIYAAGDVAAFPLALEGFAP----------VRHEHIQNARDMAICAARNMVGSSAWGSLVSSAGEAGFQKDYYGGGELPMYQPVPGFSSRFLGLSWRFYGVAEGEVVVLGAAEFRTTRTFGAFWVRKERVVGAFLEGGT---IEQQIAVAQVTRLRPKVFSSQLLKGSQLGDFLEDP 535
BLAST of mRNA_H-elongata_contig11334.1075.1 vs. uniprot
Match: A0A7S2SVG3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVG3_9STRA) HSP 1 Score: 262 bits (670), Expect = 4.420e-75 Identity = 167/473 (35.31%), Postives = 242/473 (51.16%), Query Frame = 1
Query: 235 DLSGSPLEFTCPDRFGFGSVHYVRDLGDSCKLVQAMKRVEVDGQDTCKDPVVLVGGGFITCDVAAAIATHYPGMPLVMVMPGEDVMSST---GFGKDICHFYEKQLARAGVVFAKGYRVNRLWGIEEEGSFPTLERTSQGSSLKKTLPRTFGPADPHFTDCRGVVLLKKETGEK------------VWLAARFVVLGIGSIPNSELFRNILALS-RDGGIVTDSSLCASHPSGDIFAAGDVACAPVPLAGYEESTSSPEITKVVRFEHVNTARDMGKLAAKAMLGGIDADEQYDPVPYMYSRLLDLSWKFFGFARGETCVLGVENFPVSRTFGAFWVFKGRIVGAFLEADPRCGVDYSATLERIAREQPPVLSIKHLKKCPLEKILSDPYCLTPPKLDIGEFHADIDKSSIEEAFHTFAVANDK-VKREDMSAVMKDLGADWDEDELADVLEALDPSDSGFVLLTDFVRWWSN 1602
D S + T +R+GFGS+H + D+ K V A+ R E DGQ+TC DPVV+VG G V A + P +P+V+V+PG ++ S DI FYE+QL + V A+GY V R W E GSF TLE + G L+ T PR F P F RG+VL + + + V L AR +L P++ +F ++L G + D P ++A G A P+ + G + T + T DM + + M G A P+P+ DL +F G GE ++G + + F +V +GR+VG FLE + + LE IARE+P +LS+K L+K PL ++++DP+CL PP+L +GEF A++D +I+EAF F + VK D++A+MK+LGADWD +E A+ EALDP + G V FV WW N
Sbjct: 182 DPENSTVSLTDSNRYGFGSIHTLTSFQDAFKFVVAVTRAEEDGQETCLDPVVVVGDGVEAMQVIAMLVKFLPDLPVVLVLPGGSLLPSLIPRAVPSDIRDFYERQLTKNNVKIARGYEVVRPWATTETGSFSTLEGPASG--LQPTRPRNFESCQPQFVQSRGLVLQRVQLDNESEMGTGADQQGLVHLPARMALLLPRPSPSTSIFSSLLPTDPATGALEVDDRFRTPVPG--VYAVGGAAAFPL-VDGTAATDGLSGATNSHWTPLLPTQWDMAEAVGRDM-AGTQAPIAPTPIPHADMSFFDLHCRFRGVTSGEPVMVG-DTTGRPKFFACVFVRQGRLVGIFLEGGDQ---SHDEALEVIARERPQILSVKKLRKLPLPQLMTDPFCLVPPELGVGEFVAEVDDEAIQEAFRRFDITGAGCVKTSDLAALMKELGADWDAEEQAEAQEALDPFEKGSVSYASFVDWWKN 644
BLAST of mRNA_H-elongata_contig11334.1075.1 vs. uniprot
Match: A0A7S2UXU9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXU9_9STRA) HSP 1 Score: 171 bits (432), Expect = 5.930e-45 Identity = 99/279 (35.48%), Postives = 146/279 (52.33%), Query Frame = 1
Query: 829 SRDGGIVTDSSLCASHPSGDIFAAGDVACAPVPLAGYEESTSSPEITKVVRFEHVNTARDMGKLAAKAMLGGI-------------------DADEQYDPVPYMYSRLLDLSWKFFGFARGETCVLGVENFPVSRTFGAFWVFKGRIVGAFLEADPRCGVDYSATLERIAREQPPVLSIKHLKKCPLEKILSDPYCLTPPKLDIGEFHADIDKSSIEEAFHTFAV--ANDKVKREDMSAVMKDLGADWDEDELADVLEALDPSDSGFVLLTDFVRWWSN 1602
S G ++ D+ +H SGDIFAAGDVAC P+ L G E +V HV AR+M + A+ M + + + + PVP YSR+L+L W F+G A+GE VL +E++ + FG FW+ R+VGAFLE + L +A +P V SIK ++ L++ L +P L P L+ G+F A+ + + E FH F + + +VK E + +MK+LGADW++ ELA+ ALDP G V F +WW+N
Sbjct: 4 SPGGHLIVDNFCRTTHYSGDIFAAGDVACFPLELEGGE----------MVNHSHVQNAREMAQFVAQCMADPLYESTANTPSAVQERAASVGNRGQPFQPVPSFYSRVLELHWNFYGIAQGEPVVLDLEHYEERKRFGVFWLRDNRVVGAFLEGGT---AEEHEILRDVAVSRPEVRSIKMFRRADLQEFLDNPRFLAPDSLEPGDFAAETHSNIMHEVFHGFEIKPGSSRVKLEHLEPIMKELGADWNKTELAEAYRALDPHGLGVVSYNVFCQWWTN 269
BLAST of mRNA_H-elongata_contig11334.1075.1 vs. uniprot
Match: A0A7S2SXC4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SXC4_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.570e-44 Identity = 118/349 (33.81%), Postives = 174/349 (49.86%), Query Frame = 1
Query: 598 IEEEGSFPTLERTSQGSSLKKTLPRTFGPADPHFTDCRGVVLLKKETGEK------------VWLAARFVVLGIGSIPNSELFRNILALS-RDGGIVTDSSLCASHPSGDIFAAGDVACAPVPLAGYEESTSSPEITKVVRFEHVNTARDMGKLAAKAMLGGIDADEQYDPVPYMYSRLLDLSWKFFGFARGETCVLGVENFPVSRTFGAFWVFKGRIVGAFLEADPRCGVDYSATLERIAREQPPVLSIKHLKKCPLEKILSDPYCLTPPKLDIGEFHADIDKSSIEEAFHTFAVANDK-VKREDMSAVMKDLGADWDEDELADVLEALDPSDSGFVLLTDFVRWWSN 1602
I E GSF TLE + G L+ T PR F P F RG+VL + + + V L AR +L P++ +F ++L G + D P ++A G A P+ + G + T + T DM + + M G A P+P+ DL +F G GE ++G + + F +V +GR+VG FLE + + LE IARE+P +LS+K L+K PL ++++DP+CL PP+L +GEF A++D +I+EAF F + VK D++A+MK+LGADWD +E A+ EALDP + G V FV WW N
Sbjct: 4 ITETGSFSTLEGPASG--LQPTRPRNFESCQPQFVQSRGLVLQRVQLDNESEMGTGADQQGLVHLPARMALLLPRPSPSTSIFSSLLPTDPATGALEVDDRFRTPVPG--VYAVGGAAAFPL-VDGTAATDGLSGATNSHWTPLLPTQWDMAEAVGRDM-AGTQAPIAPTPIPHADMSFFDLHCRFRGVTSGEPVMVG-DTTGRPKFFACVFVRQGRLVGIFLEGGDQ---SHDEALEVIARERPQILSVKKLRKLPLPQLMTDPFCLVPPELGVGEFVAEVDDEAIQEAFRRFDITGAGCVKTSDLAALMKELGADWDAEEQAEAQEALDPFEKGSVSYASFVDWWKN 342
BLAST of mRNA_H-elongata_contig11334.1075.1 vs. uniprot
Match: A0A7S2FEA6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FEA6_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.670e-35 Identity = 104/317 (32.81%), Postives = 155/317 (48.90%), Query Frame = 1
Query: 745 KVWLAARFVVLGIGSIPNSELFRNILALSRDGGIVTDSSLCASHPSGDIFAAGDV-ACAPVPLAGYEESTSSPEITKVVRFEHVNTARDMGKLAAKAMLGGIDADEQYDP-VPYMYSRLLDLSWKFFGFARG--ETCVLGVENFPVSRT---FGAFWVFK--------GRIVGAFLEADP-------------RCGV-DYSATLERIAREQPPVLSIKHLKKCPLEKILSDPYCLTPPKLDIGEFHADIDKSSIEEAFHTFAVAND--KVKREDMSAVMKDLGADWDEDELADVLEALDPSDSGFVLLTDFVRWWSN 1602
+V + AR ++ IG PN++LF + L + ++ D++LC S+ +++AAGDV +C +G T A +MG+ AA+ M+ G YD V ++ SR +DL+W FFG G E +L E F WV + G VG D + G + + L +IA EQP V+S++ LKK + L+DP+CL P L +GEF+A+ D I + FH+F N +VK + A+MK+LGA+WDEDELA+ +ALD +G V F WW N
Sbjct: 1 EVHVPARLTIIAIGCEPNTDLFSSTLKTTETNALLVDNTLCTSYQGRNVYAAGDVVSCG----SGLRVGTKMK-------------AANMGRHAARVMVQGETQVAPYDSGVEHLTSRFMDLTWHFFGSIEGNHEVVILDQEEDDKDTNHICFLVLWVTRREDDQSDGGSTVGRTPRGDDLRDELSRVQAVLLQGGTPEQVSVLAKIAEEQPIVVSVRKLKKLSMSHFLADPHCLEPAPLGVGEFYAEDDFDGISDVFHSFCDTNSHGQVKVAHLGAIMKELGANWDEDELAEAQQALDLQANGMVGFESFRNWWLN 300
BLAST of mRNA_H-elongata_contig11334.1075.1 vs. uniprot
Match: A0A836CH28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH28_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.760e-34 Identity = 125/418 (29.90%), Postives = 173/418 (41.39%), Query Frame = 1
Query: 541 LARAGVVFAKGYRVNRLWGIEEEGSFPTLERTSQGSSLKKTLPRTFGPADPHFTDCRGVVLLKKETGEKVWLAARFVVLGIGSIPNSELFRNILALSRDGGIVTDSSLCASHPSGDIFAAGDVACAPVPLAGYEESTSSPEITKVVRFEHVNTARDMGKLAAKAMLGGIDADEQYD---------------------------------PVPYMYSRLLDLS-----WKFFGFARGETCVLG-----VENF---------------------PVSRTFGAFWVFKGRIVGAFLEADPRCGVDYSATLERIAREQPPVLSIKHLKKCPLEKILSDPYCLTPPKLDIGEFHADIDKSSIEEAFHTFAVAND--KVKREDMSAVMKDLGADWDEDELADVLEALDPSDSGFVLLTDFVRWW 1596
LARAGV A GYRV RLW +EEEG P LE + G L+K+ PR +G ADP FT RGVVL ++G + WL ARFVV G+ PNS LF L L+ D I D L SH SG +FAAGDVA + P P+ + ++ L ++ W F G A GE +L EN P++ FG WV G +VGAF+E C + S ++ E+ +++ ++ P + L GEF A++D+ S+ EAF F+ A V + + A+M++LGADWD EL +A+DP ++G + F WW
Sbjct: 430 LARAGVCVAHGYRVERLWALEEEGDLPVLEYSPAG--LRKSTPRWWGKADPFFTTTRGVVLTDSQSGSQHWLPARFVVAGMAWHPNSTLFAASLDLAPDATIRVDEHLRTSHASGAVFAAGDVASSAAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKFPLKFHHTPALSMAFQGVRWCFAGDAVGEPVLLNFPEPSAENSSSSCKGAPTVHSGEGNAPSSPPLTAPFGVVWVKAGVMVGAFVETG-ECSAESSGE-GSLSAERALRGALRIARERPQRRSARQLRHTRLESLLAGEFDAEVDEESMREAFAKFSRARSGAAVLSDSIGAIMQELGADWDGVELVLAKKAMDPHNTGAISYDRFREWW 843
BLAST of mRNA_H-elongata_contig11334.1075.1 vs. uniprot
Match: A0A6H5KRR4_9PHAE (MDHAR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRR4_9PHAE) HSP 1 Score: 139 bits (349), Expect = 2.050e-32 Identity = 114/355 (32.11%), Postives = 143/355 (40.28%), Query Frame = 1
Query: 526 FYEKQLARAGVVFAKGYRVNRLWGIEEEGSFPTLERTSQGSSLKKTLPRT------------FGPADPHFTDCRGVVLLKKETGEKVWLAARFVVLGIGSIPNSELFRNILALSR--------DGGIVTDSSL--CASHPSGD----------------IFAAGDVACAPVPLAGYEESTSSPEITKVVRFEHVNTARDMGKLAAKAMLG--------------GIDAD-------EQYDPVPYMYSRLLDLSWK-------------------------------------------------------------FFGFARGETCVLGVENFPVSRTFGAFWVFKGRIVGAFLE 1230
FYE++L +AGV K RLWG+EE+ P +T Q +++ + FGPA FT+CRGVVL E + + AR V++GIG++PNSELFR L +S DGGI+ DS PS D I+AAGDVA P+ L G+ VR+EH+ ARDM AAK M+G G D Y PVP SR L LSW+ F+G A GE VLG F +RTFGAFWV K R+VGAFLE
Sbjct: 4 FYEEKLKQAGVRLEKNVTAERLWGLEEQARTPGAWQTQQSATIIVDICYRGEFDTLGGRRVHFGPAPRGFTECRGVVLRNTEDC-LIHVPARTVIIGIGAVPNSELFRGKLEMSEVGTGDGRLDGGILVDSQCRTAVQPPSEDGGGGGIDVGSAAPPRPIYAAGDVAAFPLALEGFA----------AVRYEHIQNARDMAICAAKNMVGSSAWGSLVSSAGEAGFQKDYYGGGELPTYQPVPGFSSRFLGLSWRLEFGSLSEAMLSTTFHRYPGIFNFPYIARHSLPFGVFPLHHGTLTRRFLRLRVPGRKLPRRFYGVAEGEVVVLGAAEFRTTRTFGAFWVRKERVVGAFLE 347
BLAST of mRNA_H-elongata_contig11334.1075.1 vs. uniprot
Match: A9TN13_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TN13_PHYPA) HSP 1 Score: 137 bits (345), Expect = 5.300e-31 Identity = 118/354 (33.33%), Postives = 164/354 (46.33%), Query Frame = 1
Query: 289 SVHYVRDLGDSCKLVQAMKRVEVDGQDTCKDPVVLVGGGFITCDVAAAIATHYPGMPLVMVMPGEDVMSSTGFGKDICHFYEKQLARAGVVFAKGYRVNRLWGIE-EEGSFPTLERTSQGSSLKKTLPRTFGPADPHFTDCRGVVLLKKETGEKVWLAARFVVLGIGSIPNSELFRNILALSRDGGIVTDSSLCASHPSGDIFAAGDVACAPVPLAGYEESTSSPEITKVVRFEHVNTARDMGKLAAKAMLGGIDADEQYDPVPYMYSRLLDLSWKFFGFARGETCVLGVENFPVSRTFGAFWVFKGRIVGAFLEADPRCGVDYSATLERIAREQPPVLSIKHLKKCPLEKILS 1347
+V Y+RD+ D+ LV AM G V++GGG+I + AAA+ H +P+ MV P ED F +I +YE + G+ F KG N L E +E T GS + A VV+GIG PN +LF L L + G V S+ S ++A GDVA P+P+ + V R EHV+ AR A +A+L G D YD +PY YSR+ LSW+F+G G++ + G + + FGAFWV GR+VGAFLE + V+Y+A L + ARE+P V I LKK L+ L+
Sbjct: 140 NVCYLRDIKDATYLVDAMAECREKG-----GKAVVIGGGYIGMECAAAL--HGNRIPVTMVFP-EDYCMPRLFTPEIARYYEDYYMKKGIQFRKG---NVLSSFECDESDKVTAVILKDGSRID----------------------------------ADIVVVGIGIRPNVDLFEGQLMLEKGGIKVNGKMQSVSNAS--VYAVGDVATFPMPM-----------YSDVRRLEHVDHARKSAAHAVQAILMGNKVDN-YDYLPYFYSRVFTLSWQFYGDNVGDSVLFGDQ---IVGKFGAFWVHNGRLVGAFLEGGSK--VEYAA-LAKAARERPHVKDISMLKKQGLDFALT 428 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11334.1075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11334.1075.1 >prot_H-elongata_contig11334.1075.1 ID=prot_H-elongata_contig11334.1075.1|Name=mRNA_H-elongata_contig11334.1075.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=422bp MKRVEVDGQDTCKDPVVLVGGGFITCDVAAAIATHYPGMPLVMVMPGEDVback to top mRNA from alignment at H-elongata_contig11334:1337..6829- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11334.1075.1 ID=mRNA_H-elongata_contig11334.1075.1|Name=mRNA_H-elongata_contig11334.1075.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5493bp|location=Sequence derived from alignment at H-elongata_contig11334:1337..6829- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11334:1337..6829- >mRNA_H-elongata_contig11334.1075.1 ID=mRNA_H-elongata_contig11334.1075.1|Name=mRNA_H-elongata_contig11334.1075.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2532bp|location=Sequence derived from alignment at H-elongata_contig11334:1337..6829- (Himanthalia elongata Himel1 dioecious)back to top |