mRNA_H-elongata_contig11310.1063.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11310.1063.1 vs. uniprot
Match: A0A836CLN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLN6_9STRA) HSP 1 Score: 457 bits (1176), Expect = 4.670e-152 Identity = 234/474 (49.37%), Postives = 305/474 (64.35%), Query Frame = 1
Query: 10 LEGDGVCEYLYKYIWCKDERSFRPTINITDTIIYKFGQPISWYFTGVDGKVKKKLKTNTINAKIEETFTKAGR-------------------GHDVIAYYISWTSIASNKFQNDDRDHTTIEYFDQHGLREFLFNRWKERNGILQRFVDPKGTRNSMVRAIWSPKMCLLERRVNNRQLHDRRYGIYERSVTYDGPDIYSTASPLRGSVLSLQVQQCCESIVAHVSEVSYKKTRISGMSINFKIDSRDRIWMLWSNSIRL-------AGEMPPGHET------------------YTQVGSPININELVRVSPDFTLRQSIQHCKDIVMPSI--VKCSSCDESSPGNRFHAVHYKTIIAHFEQVIDLVCYDSENRLGAVEWPPPAEILGAAGGIGFGNIR-LATLSDPSS----ISKEDVTVPPVIRALHPKLAAGGYVRHRRDPLFLYKTALVCESCFLVYAELASLAFRTPGR 1278
+ GDGVC LY+Y+WCKDE SF P IN+ DT++YK+GQP+ WYFT +DG +KKKL++N NAKIEE+F K G DV+AYYISW + ++ ++ IEYFD GL+EFLF+R K+ NGILQ FV+P G+ N++VRAIW+PK+CL ERRVN R+L D+RYG++ER+VTYDGPDIYS A PLRG+VL V+ C++I AHV+E++ + RIS MS+N KID +DR+W+LWS+SIRL A PP ++ SP+ ++E+V+V L+Q H +P ++CSSC +P FHAV YKT++ HFEQV+DL E G V+WPP EI+ AAGG+GFG + + DP + I+ EDVT+PPVIRALHP+LAA Y RHRRDPLFLYK A VCE C+L YA LAS AFRT R
Sbjct: 1 IAGDGVCISLYEYLWCKDEISFSPQINVPDTVVYKYGQPVHWYFTAMDGTIKKKLRSNMTNAKIEESFLKKAHAQAPKTSKSKHHPQDALLEGSDVVAYYISWETNGADAGNKSEQAAAEIEYFDAAGLKEFLFHRSKQHNGILQAFVEPSGSSNAVVRAIWTPKLCLTERRVNCRKLRDKRYGLFERAVTYDGPDIYSVARPLRGTVLPTAVRHLCDAIAAHVAEITIHQQRISCMSLNLKIDHKDRLWLLWSSSIRLVRDGSSAAAASPPARTPACDGNPATDSSSGDGACGLQRLRSPVLMSEVVKVPAHLRLQQDAVHDPVGAVPRAPRLQCSSCGALTPAKSFHAVPYKTVVVHFEQVLDLASKHPEVTSGTVQWPPAPEIIAAAGGVGFGAAAAMLSSGDPPAAARAITLEDVTIPPVIRALHPRLAADAYARHRRDPLFLYKCAEVCERCYLAYAGLASAAFRTRSR 474
BLAST of mRNA_H-elongata_contig11310.1063.1 vs. uniprot
Match: F0YIR0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIR0_AURAN) HSP 1 Score: 451 bits (1160), Expect = 2.180e-145 Identity = 244/559 (43.65%), Postives = 342/559 (61.18%), Query Frame = 1
Query: 7 SLEGDGVCEYLYKYIWCKDERSFRPTINITDTIIYKFGQPISWYFTG-VDGKVKKKLKTNTINAKIEETFTKAGRGHDVIAYYISWTSIASNKFQNDDRDHTTIEYFDQHGLREFLFNRWKERNGILQRFVDPKGTRNSMVRAIWSPKMCLLERRVNNRQLHDRRYGIYERSVTYDGPDIYSTASPLRGSVLSLQVQQCCESIVAHVSEVSYKKTRISGMSINFKIDSRDRIWMLWSNSIRLAG-EMPPGHETYTQVGSP--ININELVRVSPDFTLRQSIQHCKDIVMPSI-VKCSSCDESSPGNRFHAVHYKTIIAHFEQVIDLVCYDSENRLGAVEWPPPAEILGAAGGIGFGNIRLATLSDPSSISKEDVTVPPVIRALHPKLAAGGYVRHRRDPLFLYKTALVCESCFLVYAELASLAFRTPGRRALTDHVMSTHFSAKYRSYAISRLKLPERSWQPLPQKRGKAFGQRLLTCNMQQKPS--PELPEPIRRYVKHDVRAQAGAIISSISTEDISRE-SLNDLIRDREDEFFRDLHSGKN---DTSHPLQHMVAS 1650
SLEGDG+ + L ++ KDE + P++ + DT++YKFGQP+ WYFT VD K+KKK K N +N +IEE F K G D++AYYIS ++ + TTIEYFD+ GL EFL+NRWKE NGILQRFV+PKG N+++RAIWSPK+CLLERRVN++QLHD+RYG+YER+VTY+GP+ +S A+PLRGS L QVQ+ CE++VAH++EVS++K I M NFK+DS+ RIW LWS+SIRLAG P T P I+IN +V++ P L H D + + C SC S+ ++FH + YKTI+AHFEQ++ ++ D G+V+WPP I+ AAGG+GFGN+ + + + D T+PP+IR +HPKL+ Y ++RRDPLF+YKT +VCE CFLVYAEL+S +P +T + K + S P R + + K + + P+ P +P PI K + Q E + R S+ D+++ RED FF++ S + HPL H++ S
Sbjct: 5 SLEGDGISDTLLHWLHAKDELGYGPSLWLPDTVVYKFGQPVHWYFTSTVDSKLKKKNKQNLVNVRIEEAFNKRSAGCDLVAYYISEVAL-----EGSAESDTTIEYFDRRGLHEFLYNRWKENNGILQRFVEPKGMHNAIIRAIWSPKVCLLERRVNSKQLHDQRYGLYERAVTYEGPEHFSAAAPLRGSTLPSQVQRICENLVAHITEVSFQKHCIMRMVANFKVDSKGRIWFLWSSSIRLAGGRSQPRSITIDPFVEPNAISINSIVQLPPHIKLVDKANHSDDEAQALLCMHCISCGRSATSDQFHPIQYKTIVAHFEQLVAMLQTDGH---GSVKWPPNPTIIAAAGGVGFGNLEALADRNRNEMRGADATMPPIIRQIHPKLSLDAYRKYRRDPLFMYKTVVVCEDCFLVYAELSS----SPNASVVTRQC-----TGKQSPFVTSDNCFPWRQAEMVSHKLPRQLRMQSTQSKSVWMPNEAPSIPAPIYNSAKLALPPQQA------EDESVGRILSIEDMVKQREDLFFQEARSSQTVNLQKGHPLTHLITS 540
BLAST of mRNA_H-elongata_contig11310.1063.1 vs. uniprot
Match: F0YMK7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMK7_AURAN) HSP 1 Score: 441 bits (1135), Expect = 3.660e-143 Identity = 272/666 (40.84%), Postives = 382/666 (57.36%), Query Frame = 1
Query: 7 SLEGDGVCEYLYKYIWCKDERSFRPTINITDTIIYKFGQPISWYFTGV-DGKVKKKLKTNTINAKIEETFTKAGRGHDVIAYYISWTSIASNKFQNDDRDHTTIEYFDQHGLREFLFNRWKERNGILQRFVDPKGTRNSMVRAIWSPKMCLLERRVNNRQLHDRRYGIYERSVTYDGPDIYSTASPLRGSVLSLQVQQCCESIVAHVSEVSYKKTRISGMSINFKIDSRDRIWMLWSNSIRLAGE---MPPGHETYTQVGSPININELVRVSPDFTLRQSIQHCK-DIVMPSIVKCSSCDESSPGNRFHAVHYKTIIAHFEQVIDLVCYDSENRLGAVEWPPPAEILGAAGGIGFGNIRLATLSDPSSISKEDVTVPPVIRALHPKLAAGGYVRHRRDPLFLYKTALVCESCFLVYAELAS--LAFRTPGRRALTDHVMSTHFSAK---YRSYAISRLKLPERSWQPLPQKRGKAFGQRLLTCNMQQKPSPELPEPIRRYVKHDVRAQAGAIISSISTEDIS--RESLNDLIRDREDEFFRDLHSGKNDTS--HPLQHMVASQRKLL--SIGVPLHQVGPTATAPKLD-------ATISPY-EQPLHLVEYRGRAHTSTLNLHSSSLASRHMAPRKDRSKNKKCEERHSTSSKIHRQFLSKTLNTV 1932
SLEGDG+ + L ++ KDE + P++ + DT++YKFGQP+ WYFT DGK+KKK K N +N +IEETF K G D++AYYIS + S T IEYFD+ GL +FL+NRWKE NG+LQRFV+PKG RN ++RAIWSPK+CLLERRVN +QLHD RYG+YER+VTY+GP+ +S A+PLRGS L Q+Q+ CE++V H++EVS++K RI+ M INFK+DSRDRIW+LWS+SIRL E P + ++I+ +V++ P L H + + + V C SC + + ++FH V YKTII HFE ++ L+ D+E G ++WPP E++ AAGG+GFGN+ + +VT+PP+IR +HPKL Y ++RRDPLF+YKT VCE CFLVYAELA+ L T +R + + S++ + + + RL P+ R +LT +P +P PI Y +V + A S + D S + S+++++R RE+ FF+ + ++D HPL H+V S R + SI P AP A SPY EQP L R + ++H + S SSK HR+FL T TV
Sbjct: 5 SLEGDGISDVLLHWLHAKDELGYGPSLWLPDTVVYKFGQPVHWYFTSAADGKIKKKNKQNLVNVRIEETFNKRNIGCDIVAYYISEVTDESGGGAT-----TNIEYFDRRGLHDFLYNRWKEHNGVLQRFVEPKGIRNVVIRAIWSPKVCLLERRVNAKQLHDHRYGLYERAVTYEGPEHFSAAAPLRGSTLPSQIQRICENLVTHINEVSFQKHRIARMVINFKVDSRDRIWLLWSSSIRLTSEHKQAPISIGNAAETKQAVSIDSIVQLPPYVKLVDKASHSEAEPESLACVCCVSCAKVATSDQFHPVQYKTIITHFELLLSLLQVDTET--GLLKWPPAPEVIAAAGGVGFGNLLSHQERNKQEPRDINVTLPPIIRKVHPKLTPAMYRKYRRDPLFMYKTVAVCEDCFLVYAELANSPLTLMTT-QREIVSSSLGMGLSSRAPPWENEPLGRLHHEHSHEAPIKPNRNTW----MLT------EAPSMPAPI--YSSPNVASDA----SPNTQPDKSGLQLSVDEIVRRREETFFKAV-KNRDDVQKGHPLTHLVTSYRSIQQHSIEKSNGSYKPAGIAPVQGRAXXXGHAHRSPYFEQPALLDSSRKKTENEAKSVHRQQI---------------------SKSSKQHREFLMSTHFTV 624
BLAST of mRNA_H-elongata_contig11310.1063.1 vs. uniprot
Match: A0A7S1XZC3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZC3_9STRA) HSP 1 Score: 434 bits (1117), Expect = 9.530e-139 Identity = 245/582 (42.10%), Postives = 353/582 (60.65%), Query Frame = 1
Query: 7 SLEGDGVCEYLYKYIWCKDERSFRPTINITDTIIYKFGQPISWYFTGVDGKVKKKLKTNTINAKIEETFTKAGRGHDVIAYYISWTSIASNKFQNDDRDHTTIEYFDQHGLREFLFNRWKERNGILQRFVDPKGTRNSMVRAIWSPKMCLLERRVNNRQLHDRRYGIYERSVTYDGPDIYSTASPLRGSVLSLQVQQCCESIVAHVSEVSYKKTRISGMSINFKIDSRDRIWMLWSNSIRLAGEMPPGHETYTQVGSPININELVRVSPDFTLRQSIQHCKDIVMPSIVKCSSCDESSPGNRFHAVHYKTIIAHFEQVIDLVCYD------SENRLGAVEWPPPAEILGAAGGIGFGNIRLATLSDPSSISKEDVTVPPVIRALHPKLAAGGYVRHRRDPLFLYKTALVCESCFLVYAELASLA------FRTPGRRALTDHVMSTHFSAKYRSYAISRLKLPERSWQPLP---QKRGKAFGQRLLTCNMQQKP-------SPELPEPIRRYVK-HDVRAQAGAIISSISTEDISRESLNDLIRDREDEFFRDL-------HSGKNDTSHPLQHMVASQRKL 1662
+++ DGV E+ + Y+WCKDE +F + + DT++YKFG P++WYFTGVDG +K+K K N +NA+IEE TK G DV+AYY++ S + + IEYFD+ L +FL+ R+K+ +GILQRFV+PKGT N+++RAIWSPK+CLLERR N RQLHD R+G+YER +TY+GPD +S A+PLRGSVL Q+Q+ CE++V+HV+EVSY+ RIS M +NFK+D+RD+IW+LWS+S+RL G P T+ + I ++RV L + H D+ + +C SC ++ P N+F V YK ++ HFEQ++ L+ D S +EWPP E++ AAG +GFG + L + +EDV +PP+ R LHPKL+ Y + +RDPLFLYKT +VCE CFLV+AELAS A +T GR L H S RS S K + +W+P+P + + K + L M + +PELP+ IR + DV + + + + D +R+RE+EFFR + SG++ PL HM+ SQ++L
Sbjct: 6 TIDRDGVNEHFFHYLWCKDELNFGVHLWLPDTVVYKFGHPVAWYFTGVDGSIKRKHKQNLVNARIEEAMTKRVIGSDVVAYYMTLPSPDEEEDAKTTGHESDIEYFDKDALHQFLYTRFKDSSGILQRFVEPKGTNNAVIRAIWSPKICLLERRQNVRQLHDGRFGLYERCITYEGPDHHSRAAPLRGSVLPSQIQRICENVVSHVAEVSYQTFRISRMVLNFKVDARDKIWLLWSSSMRLEGG--PRRLANTR---DVEIGAMMRVPKHVLLDHQVNH-GDLQRRVLARCISCGKNYPDNQFQPVSYKCVMLHFEQILTLMALDPSYDQPSGGFERTLEWPPEPEVIAAAGNVGFGLVE-EELEKKNKFVEEDVIIPPIFRHLHPKLSCKMYGKLKRDPLFLYKTCMVCEECFLVFAELASTAATSASVLKTIGRTRLA-HAGSAALGTGPRSKG-SYSKYDDDAWKPVPVPAESKAKRAREALRKGGMGESTLSKVSGTAPELPDTIRGVQEARDVTFRK--LFPDDNMDSQEGAYFEDSMRERENEFFRRMGQTGFTPQSGES----PLVHMIQSQQRL 572
BLAST of mRNA_H-elongata_contig11310.1063.1 vs. uniprot
Match: A0A6S8UJB5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8UJB5_9STRA) HSP 1 Score: 412 bits (1058), Expect = 3.360e-132 Identity = 226/555 (40.72%), Postives = 334/555 (60.18%), Query Frame = 1
Query: 7 SLEGDGVCEYLYKYIWCKDERSFRPTINITDTIIYKFGQPISWYFTGVDGKVKKKLKTNTINAKIEETFTKAGRGHDVIAYYISWTSIASNKFQNDDRDHTTIEYFDQHGLREFLFNRWKERNGILQRFVDPKGTRNSMVRAIWSPKMCLLERRVNNRQLHDRRYGIYERSVTYDGPDIYSTASPLRGSVLSLQVQQCCESIVAHVSEVSYKKTRISGMSINFKIDSRDRIWMLWSNSIRLAGEMPPGHETYTQVGSPININELVRVSPDFTLRQSIQHCKDIVMP-SIVKCSSCDESSPGNRFHAVHYKTIIAHFEQVIDLVCYDSENRLGAVEWPPPAEILGAAGGIGFGNIRLATLSDPSSISKED--VTVPPVIRALHPKLAAGGYVRHRRDPLFLYKTALVCESCFLVYAELASLAFRTPGRRALTDHVMSTHFSAKYRSYAISRLKLPERSWQPLPQKRGKAFGQRLLTCNMQQKPSPELPEPIRRYVKHDVRAQAGAIISSISTEDISRESLNDLIRDREDEFFRDLHSGKNDTSHPLQHMVASQRKL 1662
LEGDG+ + L ++ KDE + P++ + DTI+YKFGQP+ WYFT V GK+KKK K N N +IEE F K R +V+AYY+S ++ + + T IEYFD+ GL EFL+NRWKE NGILQ FV+PKG N+++RAIWSPK+CLLERRVN++QL+D+RYG+YER+VTY+GP+ +S ASPLRG+ L Q+Q+ CE++VAHV+EVS++K R++ M NFK+DSR RIW LWS+SIRL + ++ +PI+IN +++ D TL H + P + ++C SC +S+ ++FH V Y+TII+HFE+ + + S+ ++ P I+ A+GG+GFG + D + I + +PP+I+ +HPKL+ Y R+RRDPLF+YK+A VCE+C+LVYAE + A R ++ +T +AK ++ + L + G + L + P +P PI Y + S ++ +S + +I RE FF D+ S HPL H+ S R +
Sbjct: 5 GLEGDGISDVLLSWLHTKDELGYGPSLRMPDTIVYKFGQPVHWYFTSVSGKLKKKNKQNLANVRIEEVFNK--RNSEVVAYYMSEMAVQGRREKV-----TAIEYFDRRGLHEFLYNRWKENNGILQHFVEPKGVHNAIIRAIWSPKVCLLERRVNSKQLYDQRYGLYERAVTYEGPEHFSIASPLRGTALPSQIQRLCENLVAHVTEVSFQKCRVARMVANFKVDSRGRIWFLWSDSIRLERSCGKSQDL-PRICTPIDINRTIQLPADVTLIDKPNHSQGEFKPLNCLQCISCGKSATSDKFHQVRYQTIISHFERALAAIVDKSQTS----KYYPEPLIMEASGGVGFGKAK-----DCAGIPLRGAGIVIPPIIKQIHPKLSPEIYKRYRRDPLFMYKSAAVCENCYLVYAEFVTAA----SSRKYSELDYTTKANAKTKTNTD----------EALQKNLAANNGNKTLNRQTAKPLMPSIPAPI--YSVPGANTGSPYFDSKNYSDGLS---VGAIIHQREKSFFNDVSSAHLQKGHPLAHLATSFRSI 523
BLAST of mRNA_H-elongata_contig11310.1063.1 vs. uniprot
Match: A0A7S2CLG5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CLG5_9STRA) HSP 1 Score: 384 bits (986), Expect = 4.170e-125 Identity = 181/359 (50.42%), Postives = 255/359 (71.03%), Query Frame = 1
Query: 1 MYSLEGDGVCEYLYKYIWCKDERSFRPTINITDTIIYKFGQPISWYFTGVDGKVKKKLKTNTINAKIEETFTKAGRGHDVIAYYISWTSIASNKFQNDDRDHTTIEYFDQHGLREFLFNRWKERNGILQRFVDPKGTRNSMVRAIWSPKMCLLERRVNNRQLHDRRYGIYERSVTYDGPDIYSTASPLRGSVLSLQVQQCCESIVAHVSEVSYKKTRISGMSINFKIDSRDRIWMLWSNSIRLAGEMPPGHETY--TQVGSPININELVRVSPDFTLRQSIQHC-KDIVMPSIVKCSSCDESSPGNRFHAVHYKTIIAHFEQVIDLVCYDSENRLGAV-EWPPPAEILGAAGGIGFGNI 1065
++S+ GDGV + + +W KDE +F PTINI DT+I+KFGQ ++WYFTGVDGK+KKK K N +N +IEE FT+ G D++AYYIS + + N T+IEYFD+ +FL+NRWKE +G+LQRF++PKGT+NS+VRAIWSPK+CLLERR NN+QLHD RYG+YER+VTY+GP+ +S A+PLRGS+L QVQ+ CE++V+H++EVS++K I M +NFK+D++DRIW+LWS+S+RL EM G + + +P+NI+ +V++ L + H + + + C SC P ++FH V YK II+HFE VI L+ DS R G V WPP ++ AAGG+GFG++
Sbjct: 4 LHSVHGDGVSDQFFHLLWSKDELNFGPTINIPDTVIFKFGQAVAWYFTGVDGKLKKKNKQNLVNVRIEEAFTRHVIGSDIVAYYISTETDDAGDVSN-----TSIEYFDRKAFHDFLYNRWKEHSGLLQRFIEPKGTQNSLVRAIWSPKVCLLERRQNNKQLHDTRYGLYERAVTYEGPEYFSAAAPLRGSILPSQVQRICENVVSHIAEVSFQKQCICRMVLNFKVDAKDRIWLLWSSSLRLTSEMTGGEDGLGGRRTAAPLNIDSIVKLPSHVKLEDRVSHSDQGKALTAQETCLSCAGKHPKDQFHPVAYKNIISHFEHVISLLTADSRFRSGGVGAWPPDPTVVMAAGGVGFGSV 357
BLAST of mRNA_H-elongata_contig11310.1063.1 vs. uniprot
Match: D7FR95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR95_ECTSI) HSP 1 Score: 377 bits (967), Expect = 1.520e-123 Identity = 185/266 (69.55%), Postives = 209/266 (78.57%), Query Frame = 1
Query: 1 MYSLEGDGVCEYLYKYIWCKDERSFRPTINITDTIIYKFGQPISWYFTGVDGKVKKKLKTNTINAKIEETFTKAGRGHDVIAYYISWTSIASNKFQNDDRDHTTIEYFDQHGLREFLFNRWKERNGILQRFVDPKGTRNSMVRAIWSPKMCLLERRVNNRQLHDRRYGIYERSVTYDGPDIYSTASPLRGSVLSLQVQQCCESIVAHVSEVSYKKTRISGMSINFKIDSRDRIWMLWSNSIRLAGEMPPGHETYTQVGSPININEL 798
MYSLEGDGVCE+LY++I CKDE SFRPTINI DTI+YKFGQP+SWYFTGVDGKVKKK KTN IN KIEE F KA G D++AYYISWTS S K+Q+++ D TTIEY D+ GL MVRAIWSPKMCLLERRVN RQLHDRRYGIYER+VTYDGPDI+STA PLRGSVL QVQ+CCES+VAHVSEV ++KTR+ MS+NFKIDSRDR+W+LWSNSIRLA EMPPG E++T VG PINI EL
Sbjct: 1 MYSLEGDGVCEHLYEFISCKDELSFRPTINIADTIVYKFGQPVSWYFTGVDGKVKKKFKTNIINTKIEEAFVKASVGSDIVAYYISWTSNGS-KYQDENEDKTTIEYLDRQGL--------------------------PMVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQRCCESVVAHVSEVLFRKTRVCRMSLNFKIDSRDRVWLLWSNSIRLASEMPPGRESFTCVGGPINIGEL 239
BLAST of mRNA_H-elongata_contig11310.1063.1 vs. uniprot
Match: A0A3D4HJD4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A3D4HJD4_9BACT) HSP 1 Score: 374 bits (961), Expect = 7.620e-120 Identity = 186/390 (47.69%), Postives = 269/390 (68.97%), Query Frame = 1
Query: 100 TIIYKFGQPISWYFTGVDGKVKKKLKTNTINAKIEETFTKAGRGHDVIAYYISWTSIASNKFQNDDRDHTTIEYFDQHGLREFLFNRWKERNGILQRFVDPKGTRNSMVRAIWSPKMCLLERRVNNRQLHDRRYGIYERSVTYDGPDIYSTASPLRGSVLSLQVQQCCESIVAHVSEVSYKKTRISGMSINFKIDSRDRIWMLWSNSIRLAGEMPPGHETYTQVGSPININELVRVSPDFTLRQSIQHCKDIVMP-SIVKCSSCDESSPGNRFHAVHYKTIIAHFEQVIDLVCYDSENRLGAVEWPPPAEILGAAGGIGFGNIRLATLSDPSSISKED--VTVPPVIRALHPKLAAGGYVRHRRDPLFLYKTALVCESCFLVYAELASLA 1260
TI+YKFGQP+ W+FT V GK+KKK K N N +IEE F K R +++AYY+S ++ + + T IEYFD+ GL EFL+NRWKE NGILQ FV+PKG N+++RAIWSPK+CLLERRVN++QL+D+RYG+YER+VTY+GP+ +S ASPLRG+ L Q+Q+ CE++VAHV+EVS++K R++ M NFK+DSR RIW LWS+SIRL + ++ +PI+IN +++ D TL + H + P + ++C SC +S+ ++FH V Y+TII+HFE+ + + S+ ++ P I+ A+GG+GFG + D + I + +PP+I+ +HPKL+ Y R+RRDPLF+YK+A VCE+C+LVYAE + A
Sbjct: 1 TIVYKFGQPVHWFFTSVSGKLKKKNKQNLANVRIEEVFNK--RNSELVAYYMSEMAVQGRREKV-----TAIEYFDRRGLHEFLYNRWKENNGILQHFVEPKGVHNAIIRAIWSPKVCLLERRVNSKQLYDQRYGLYERAVTYEGPEHFSIASPLRGTALPSQIQRLCENLVAHVTEVSFQKCRVARMVANFKVDSRGRIWFLWSDSIRLDRSCGKSQDL-PRICTPIDINRTIQLPADVTLIEKPNHSQGEFKPLNCLQCISCGKSATSDKFHQVRYQTIISHFERALAAIVDKSQTS----KYYPEPLIMEASGGVGFGKAK-----DCAGIPLRGAGIVIPPIIKQIHPKLSPEIYKRYRRDPLFMYKSAAVCENCYLVYAEFVTAA 373
BLAST of mRNA_H-elongata_contig11310.1063.1 vs. uniprot
Match: A0A7S3H9W1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9W1_9STRA) HSP 1 Score: 379 bits (973), Expect = 3.260e-119 Identity = 207/487 (42.51%), Postives = 294/487 (60.37%), Query Frame = 1
Query: 1 MYSLEGDGVCEYLYKYIWCKDERSFRPTINITDTIIYKFGQPISWYFTGVDGKVKKKLKTNTINAKIEETFTKAGRGHDVIAYYISWTSIASNKFQNDDRDHTTIEYFDQHGLREFLFNRWKERNGILQRFVDPKGTRNSMVRAIWSPKMCLLERRVNNRQLHDRRYGIYERSVTYDGPDIYSTASPLRGSVLSLQVQQCCESIVAHVSEVSYKKTRISGMSINFKIDSRDRIWMLWSNSIRLAGEMP---PGHETYTQVGSPININELVRVSPDFTLRQSIQHCKDIVMPSIVKCSSCDESSPGNRFHAVHYKTIIAHFEQVIDLVCYDSENRLGA------VEWPPPAEILGAAGGIGFGNIRLATLSD---PSSISK-------EDVTVPPVIRALHPKLAAGGYVRHRRDPLFLYKTALVCESCFLVYAELASLAFRT-----------PGRRALTDHVMSTHF----SAKYRSYAISRLKLP 1359
++SL DG+ E L+K +W KDE + P+INI DTI+YK+G P+SWYFT +GK+KKKLK N ++AKIEETF K G+DV+A +IS + A + IEY D+ L FL+NR KE NGILQRF++PK TRN +VRAIWSPK+CLLER N QLHD RYG+YER V Y+GP+ Y+T++PLRG VLS Q+Q+ CE +VAH+SEV++ + ++S + +NFK+DSRD+IW+++S SIR + P T +NI+ +V +S L + + K I+ ++C SC + + H V YK II H+E ++ L+ S + + WPP A+I+ AAGG+GFG + + + + P+ + D+ +PPV+ +H KL+ + R + DPLFLYKT VCE C+LVYAE ++ R P L D ++H SA +R AIS K P
Sbjct: 11 LHSLSKDGISEDLFKLLWAKDELNSGPSINIPDTIVYKYGTPVSWYFTSTNGKIKKKLKQNLVSAKIEETFNKHVLGYDVLAVFISMPAEA----EVAPGGANVIEYLDREALNNFLYNRKKEVNGILQRFIEPKSTRNELVRAIWSPKVCLLERSENIHQLHDHRYGLYERCVIYEGPEYYTTSAPLRGPVLSGQLQKLCEEVVAHISEVTFGQKQVSRIVLNFKVDSRDKIWLMYSTSIRCLDMLDYTNPTDAAATLQRQLLNIDSVVSLSNTVHLNPAKTYEK-IIPKKRIRCLSCARDTLEDMRHPVTYKAIIKHYEHILHLLADGSSSGKEVPKNDRMISWPPDAQIIEAAGGVGFGCLYITDVGEVMNPTQVMHYTKQRHVRDLKIPPVLHNIHYKLSIKSFERCKNDPLFLYKTVQVCEPCYLVYAEFTTMLLRMGQDLTKLLTPDPAAAPLLDRASTSHLDRPSSADWR--AISTAKTP 490
BLAST of mRNA_H-elongata_contig11310.1063.1 vs. uniprot
Match: A0A482RV48_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RV48_9ARCH) HSP 1 Score: 372 bits (955), Expect = 5.270e-118 Identity = 203/451 (45.01%), Postives = 277/451 (61.42%), Query Frame = 1
Query: 7 SLEGDGVCEYLYKYIWCKDERSFRPTINITDTIIYKFGQPISWYFTGVDGKVKKKLKTNTINAKIEETFTKAGRGHDVIAYYISWTSIASNKFQNDDRDHTTIEYFDQHGLREFLFNRWKERNGILQRFVDPKGTRNSMVRAIWSPKMCLLERRVNNRQLHDRRYGIYERSVTYDGPDIYSTASPLRGSVLSLQVQQCCESIVAHVSEVSYKKTRISGMSINFKIDSRDRIWMLWSNSIRLAGEMPPGHETYTQVGSPININELVRVSPDFTLRQSIQHCKDIVMPSIVKCSSCDESSPGNRFHAVHYKTIIAHFEQVIDLVC--------------YDSENRLGAV--EWPPPAEILGAAGGIGFGNIRLATLSDPSSISKE---------------DVTVPPVIRALHPKLAAGGYVRHRRDPLFLYKTALVCESCFLVYAELASLAFR 1266
SL DG+ + LYK +W +DE ++ P INI DTIIYK+GQP++WYFT V+G++K+K K N ++AKIEE F K G+DV+AY+I+ S + ND T IEYFD+ GL FL+N K NGILQRF++PK T N ++RAIWSPK+CLLER N QLHD+RYG+YER V Y+GPD Y T++PLRG VLS Q+Q+ CESIV H+SEV+Y + I+ M ++FK+DSRD+IW+L+S SIR + H T + +NI+ +V + TL + I V C SC++ + +A+ YKTII H + V+ L+ +++ GA+ WPP EI+ AAGG+GFG + D SKE D+TVPP++ +HPKL Y R + DPLF KT VCE+C+LVYAE S+ R
Sbjct: 13 SLIKDGISDDLYKLLWARDELNYGPHINIPDTIIYKYGQPVTWYFTSVNGRIKRKNKQNLLSAKIEEAFNKHILGYDVVAYFITMAS-EHERSVNDSSTPTIIEYFDRVGLNNFLYNHKKGVNGILQRFIEPKSTHNELIRAIWSPKLCLLERAENIHQLHDQRYGLYERCVVYEGPDYYFTSAPLRGPVLSGQLQKLCESIVHHISEVTYGQKLITRMVLSFKVDSRDKIWLLYSTSIRSDDMLEHKHSTTER--HLLNIDSVVSLPNTVTLNPKKTY-NPITAKMRVNCLSCNQETLDELRYAITYKTIIKHHDHVLHLLRSTTGTTAASLNMTGMTNQSSKGAIMIPWPPDQEIITAAGGVGFGCLNQ---DDDDKHSKEKGKTHHHHVKYKHIKDLTVPPMVAIMHPKLNNETYTRCKTDPLFQNKTVHVCEACYLVYAEFNSMLLR 456 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11310.1063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11310.1063.1 >prot_H-elongata_contig11310.1063.1 ID=prot_H-elongata_contig11310.1063.1|Name=mRNA_H-elongata_contig11310.1063.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=665bp MYSLEGDGVCEYLYKYIWCKDERSFRPTINITDTIIYKFGQPISWYFTGVback to top mRNA from alignment at H-elongata_contig11310:888..6981+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11310.1063.1 ID=mRNA_H-elongata_contig11310.1063.1|Name=mRNA_H-elongata_contig11310.1063.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6094bp|location=Sequence derived from alignment at H-elongata_contig11310:888..6981+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11310:888..6981+ >mRNA_H-elongata_contig11310.1063.1 ID=mRNA_H-elongata_contig11310.1063.1|Name=mRNA_H-elongata_contig11310.1063.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3990bp|location=Sequence derived from alignment at H-elongata_contig11310:888..6981+ (Himanthalia elongata Himel1 dioecious)back to top |