mRNA_H-elongata_contig113.1055.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig113.1055.1 vs. uniprot
Match: D8LTT7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT7_ECTSI) HSP 1 Score: 1001 bits (2587), Expect = 0.000e+0 Identity = 670/1550 (43.23%), Postives = 859/1550 (55.42%), Query Frame = 1
Query: 1 LFTVEPNGKLYISGMTLQNGWGGDDGGGGILASEGATLIGESCLWESLSTFGYGGGAIAAIDAANLTLRGENIFSGCFTSSNESNGGAIHLKATMLTAQGG--VRFENC----STGGKGGGIYMTSSRLAVEEAASLFFSGCTAGSLAGDN--------------------GGGVSSYDSAVTVGSNAKLS---------FEDNSVLVEGDGGGIFTRNTSIAMKG-GTNISFVNNLAGDDGGGMYLSGMDSDDYGGEDDMITCFTLAEGSNAVFIGNSGNGSGSYGGGLQFAFGCDVVIKGDVHFEQNTGVRGGAMYLDQSRAVISGRTIFINNTAERWGGAVMLLDS--DSGLQLN----------GTVIAQNNSAGRSGGVLYLENARLVVAEGGASDGGVMWERNYAGYDGGVIAVDGGEVRLEGGFAKSNRAAQRGGVLFATGESVLSWTAG-ESFDNSAASGGSLYISNSKVDLTDVRLMGDHTPSGGVLFFAGADARAINVSIIAPAELVGDFALQIDSDSVLRAFSCSFEMWSGDNSLIVSEGELVLDACDFSQSSNSILFRALSPAVIRNAILGNKNYASAENSASTAFGSVAQTCSDLSEDYSCQSNEQEDSCLDAEYGMGVLCTAYIEAATGNNIVLS-------GVG-SPVELVATSASAAPFSXXXXXXXXXXXXIVYY---PDLVIHELTLRFSSGGGETSDSSTLNSSSWEGEDAVLWELRSFDGSEYGGSPISN---GWFAGVSSDNFSWVAMPTSGVLMKDQEVTIRFVGSPSPPQDPTQPSAVYNGNVSAAFHVLSRTAEAGSTTVSSANSFVASFYYCEAGASWNGEKCVLCVELTSAMVDGDGSLECDMPGVTLVTLPLAAGYWRGNMNSTNVQPCLLDDACKGGRGIVSS---------------------------------NSTSTNNYSEGDIYCETGYVGPYCAVCAEDFRRLSGYE-CFDCQSGWGEAARAAFWMVVALTPVLLVSLIMFLFDGATPFKQAKGRADVPLVQACQRHATDTAAERGDELEEGAPSRHVARAKGLGARMRRAIPFQKLKILIAVVWQILTQFSDLAEIPYPSTYERFLEMLDVFNFDTSWALSSMCLVSEINFYEKLVILTLAPIILLGAIGLSYAGAMRWHKG----TGRNAIECRGQAKLRHASSALLVLFLVFSSVSTTIFSTFSCDYVEDLKVSMLRADYSISCDDQGHLFYQVYAGAMIFVYPIGIPFTFAYLLVKHRDKINPPA-----AVFVGP------TPDQVRVE---------------AFPRRRGRVVNPDEVFLADISTTGASATFRRVDRNRNVGQRADAGVREQRGSHGIDSSEDGGGGSGD----------------------GRVSEKEDVLKKRAQDLDLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQLAGACIFAFLTLLLSELMRPHLSQTDTWMYRTGCIAIFFSNFLGLMAKADLSGEEAQSQEVFGLLLIFVHVIMIMVVILEGYLTIK 4203
LF V+ G L++S + L WGG+DGG + + G + G WESLS G GG AI A D +TL+G + F C SS GGA+ ++ G V FE C S+GG GGG+ +++S L + F C+AG G SS F +NS +E DGGG+F +T++++ G G ++ F +N +GD GG I C LAEG+ F SGN + YGGG+ + GC + G V F N G R AV ++DS D+GL L +G V + +A V GG G W N AGYD AVDGG V LEGG A SN A++RGGVLF GES +SW+ G ES++NSAASGG++Y+S+S +LTD+RL GDHTPSG LFFAGADARA+NV+ +AP EL FAL +DS S RAF+C FE WSGD+ +VSEG++VLDACDFS S L RA IRNA+LG++N+ A +AS+ G A CS L E+ SC E+ C+DAE GMGVLC ++ EAATG L+ GVG S VELV++ XXXXXXXXXXXX PDLV HEL LR S + VLW L+ DG GG+ ++ G F G + DNF+W A+P SG L++ QEVTI+ VG+P PP DP+ P AVYNG V+A F V++RTA A S S A +FYYC AG+ W+GE CV C E+ M DG+ SLEC +PGVTL TLPLA GYWRG++ T ++ C AC GG G+ +S N+T+ + E YC G+ G YCAVCA+ +RR SG + C C W ARA W++ L+PV++V+L++FL G T Q +G+ + L+ +R T TA+ G L SR A A +G R+ RA+PFQKLKIL+ VVWQILTQFS LAEIPYP +Y+RFL +LDVFNFD +W L++ C+V I FY++LV +TL P++LL + L+Y A+ H+ + R + E R +A +RHAS+ALL+LFLVFSSVST +FST+SCDY+EDL VS+LRADYSISCD H FY+ YA MI +YPIG+P FA LL+K R+KINPP A GP + D R+E A P RGR DI G T R R V ++ + R G GS G V ++E+VL+ RAQD DLQ T+FLWEPYEP N+YYETVECGRRCLLTGALVFVLPNTAGQ AGA +FAF+ LL EL+RPHLS TD WMYR GCI IFFSNFLGLMAKAD+S EEAQSQE +GLLLI VHV+M++ ++ + Y++++
Sbjct: 158 LFIVQAGGALHLSDVVLSGAWGGEDGGSAV-SLVGGEVTGTDVRWESLSAEGAGG-AIYAQDGGTVTLKGLHHFHNC--SSGTLGGGAVFMQEAYGLFDDGAQVYFEGCGAPDSSGGDGGGVELSASNLTISSNGRTRFRECSAGXXXXXXXXXXXXXXXXXXXXXXXQACASGTSSXXXXXXXXXXXXXXXXXXXXXXXFRENSSPIE-DGGGMFAESTTLSVDGDGASLVFTDNFSGD--GGXXXXXXXXXXXXXXXXXI-CLFLAEGATMDF---SGNAATEYGGGM-YVVGCKASVAGSVSFRGNHGERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVYVVDSREDNGLGLRMXXXXXXXXXXXXXXXXXXXXXNGDVTVVRDATAAV--GGEELPGASWVGNTAGYDXXXXAVDGGGVWLEGGLASSNSASERGGVLFGIGESNVSWSGGGESWNNSAASGGTIYVSSSVANLTDLRLAGDHTPSGANLFFAGADARAVNVTAVAPEELEATFALHVDSGSAFRAFACVFEGWSGDSPSVVSEGDMVLDACDFSGSGTPTLVRASRTVTIRNAVLGDQNFGHAGFNASSLLGVGAHGCSSLPEELSCSVPEE---CVDAENGMGVLCPSFTEAATGGLFTLADVEDEDDGVGFSTVELVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXPDLVTHELVLRXXXXXXXXXXXXXXGS-----QLGVLWRLQRTDGD--GGAQAADDETGAFEGAAPDNFAWTAVPWSGYLVRGQEVTIQLVGTPPPPPDPSAPFAVYNGEVAAKFRVVTRTAAADSVATSVATEVERTFYYCAAGSYWHGEACVACAEV---MADGEDSLECSVPGVTLDTLPLAEGYWRGDITQTYIRECWNPSACAGGTGVNASSXXXXXXXXXXXXXXXXXXXXXXXXXXXTTADVNATAASFEYEDARYCIEGHRGAYCAVCADGYRRFSGGQLCVSCAGVWSTGARATLWVLGMLSPVVVVALVVFLIGGLTAVSQLQGKLSLCLLG--RRSKTVTASSGGSTLAPSRASRRAA-AGTVGLRLLRAVPFQKLKILV-VVWQILTQFSHLAEIPYPPSYQRFLNILDVFNFDITWPLTAACIVDNITFYQRLVGVTLGPLVLLAFLSLTYVIALYVHRRRNYFSSRASAEARQRAVVRHASAALLILFLVFSSVSTAVFSTYSCDYLEDLGVSLLRADYSISCDHPDHTFYEAYAALMILLYPIGVPMLFAVLLLKRREKINPPTQTLDLAAATGPVLMERVSSDTARMENEGSGHPGAAAATPRATPTARGR-------DSGDIELAGMKDTSRGARRGSAVSVASEGDSQYHRRCSGEGERRPLSNGSSGXXXXXXXXXXXXXXXXXXXXXXGLVQDREEVLENRAQDPDLQSTRFLWEPYEPDNYYYETVECGRRCLLTGALVFVLPNTAGQAAGASVFAFVGLLGFELLRPHLSHTDAWMYRIGCITIFFSNFLGLMAKADVSDEEAQSQEAYGLLLIAVHVLMVLAILAQAYVSMQ 1669
BLAST of mRNA_H-elongata_contig113.1055.1 vs. uniprot
Match: A0A6H5JUJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUJ2_9PHAE) HSP 1 Score: 878 bits (2269), Expect = 2.590e-285 Identity = 567/1296 (43.75%), Postives = 748/1296 (57.72%), Query Frame = 1
Query: 1 LFTVEPNGKLYISGMTLQNGWGGDDGGGGILASEGATLIGESCLWESLSTFGYGGGAIAAIDAANLTLRGENIFSGCFT-------------------------------SSNESNGGAIHLKATMLT--AQGGVRFENCSTGGKGGGIYMTSSRLA-VEEAASLFFSGCTAGSLAGDNGGGVSSYDSAVTVGSNAKLSFEDNSVLVEGDGGGIFTRNTSIAMKG-GTNISFVNNLAGDDGGGMYLSGMDSDDYGGEDDMITCFTLAEGSNAVFIGNSGNGSGSYGGGLQFAFGCDVVIKGDVHFEQNTGVRGGAMYLDQSRAVISGRTIFINNTAERWGGAVMLLDSDS----GLQLNGTVIAQNNSAGRSGGVLYLENARLVV------AEGGASDGGVMWERNYAGYDGGVIAVDGGEVRLEGGFAKSNRAAQRGGVLFATGESVLSWTAG-ESFDNSAASGGSLYISNSKVDLTDVRLMGDHTPSGGVLFFAGADARAINVSIIAPAELVGDFALQIDSDSVLRAFSCSFEMWSGDNSLIVSEGELVLDACDFSQSSNSILFRALSPAVIRNAILGNKNYASAENSASTAFGSVAQTCSDLSEDYSCQSNEQEDSCLDAEYGMGVLCTAYIEAATGNNIVLS-------GVG-SPVELVATSASAAPFSXXXXXXXXXXXXI---VYYPDLVIHELTLRFSSGGGETSDSSTLNSSSWEGEDAVLWELRSFDGSEYGGSPISN---GWFAGVSSDNFSWVAMPTSGVLMKDQEVTIRFVGSPSPPQDPTQPSAVYNGNVSAAFHVLSRTAEAGSTTVSSANSFVASFYYCEAGASWNGEKCVLCVELTSAMVDGDGSLECDMPGVTLVTLPLAAGYWRGNMNSTNVQPCLLDDACKGGRGIVSSNS--------------------------------TSTNNYSEGDIYCETGYVGPYCAVCAEDFRRLSGYE-CFDCQSGWGEAARAAFWMVVALTPVLLVSLIMFLFDGATPFKQA---KGRADVPLVQACQRHATDTAAERGDELEEGAPSRHVARAKGLGARMRRAIPFQKLKILIAVVWQILTQFSDLAEIPYPSTYERFLEMLDVFNFDTSWALSSMCLVSEINFYEKLVILTLAPIILLGAIGLSYAGAMRWHKG----TGRNAIECRGQAKLRHASSALLVLFLVFSSVSTTIFSTFSCDYVEDLKVSMLRADYSISCDDQGHLFYQVYAGAMIFVYPIGIPFTFAYLLVKHRDKINPPAAVFVGPTPDQVRVEAFPRRRGRV 3588
LF V+ G L++S + L WGG+DGG + + G + G W+SLS G GG AI A D +TL+G + F C + +S++ GG + L A+ LT + G RF CS G KGGG+YM + V ++ASL F C +GS +G+ GGGV +YDSA++VG+ ++F +NS +E DGGG+F ++T++++ G G + F +N +GD GGG+ L +D D ED + TC +LAEG+ F SGN YGGG+ + GC I G V F N G R GAV ++DS GL+L Y+ N + V A GG G W N AGYDGGVIAVDGG V LEGG A SN A++RGGVLF GES +SW+ G ES++NSAASGG++Y+S+S +LTD+RL GDHTPSG LFFAGADARA+NV+ +AP EL FAL +DS S RAF+C FE W GD+ ++SEGE+VLD CDFS S L RA IRNA+LG++N+ A +AS+ G A CS L E+ SC E+ C+DAE GMGVLC ++ E ATG + L+ GVG S VELV++ XXXXXXXXXXXX VYYPDLV HEL LR+S + + VLW L+ DG GG+ ++ G F G + D F+W A+P SG L++ QEVTI+ VG+P PP DP+ AVYNG V+A F V++RTA A S S A +FYYC AG+ W+GE CV C + + M DG+GSL+C PG+TL TLPLA GYWRG++ T ++ C AC GG G+++S+S T+++ E YC G+ G YCAVCA+ +RR SG + C C W ARA FW++ ++ V++++L +FL G T +A +G+ L+ +R T TA+ G L SR A A +G + RA+PFQKLKIL+ VVWQILTQFS LAEIPYP +Y+RFL +LD+FNFD +W L++ C+V I FY +LV +TL P+ LL + L+Y AM H+ + R + E R +A +RHAS+ALL+LFLVFSSVSTT+FSTFSCDYVEDL VS+LRADYSISCD H FY+ YA MI +YPIG+P FA LL+K RDK+NPP + E P +GRV
Sbjct: 161 LFVVQAGGALHLSDVVLSGAWGGEDGGRAV-SLVGGEVTGTDVRWDSLSVEGAGG-AIYAQDGGTVTLKGLHHFHNCSSGTLGGGAVFLQDAYGLFGDGAQVYFEGCRALNSSDGVGGGVELSASNLTISSNGRTRFRECSAGDKGGGLYMKKDSVVDVGDSASLEFQACASGSSSGNKGGGVCAYDSAMSVGAGTTVTFRENSSPIE-DGGGMFAKSTTLSVDGDGAALVFTDNFSGDSGGGLTLQ-IDLD----EDVIDTCLSLAEGATMDF---SGNAVTEYGGGM-YVVGCKASIAGSVSFRGNHGKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVCVIDSREDDGLGLRLXXXXXXXXXXXXXXXXXXYVVNGDVAVVRDATAAAGGDELPGASWVGNTAGYDGGVIAVDGGGVWLEGGLASSNSASERGGVLFGIGESNVSWSGGGESWNNSAASGGTIYVSSSVANLTDLRLAGDHTPSGANLFFAGADARAVNVTAVAPEELEATFALHVDSGSAFRAFACVFEGWDGDSPSVLSEGEMVLDVCDFSGSGTPTLVRASRAVTIRNAVLGDQNFGHAGFNASSLLGVGAHGCSSLPEELSCSVAEE---CVDAENGMGVLCPSFTEDATGGLVSLADVEDENDGVGFSTVELVSSXXXXXXXXXXXXXXXXXXXXXTAEVYYPDLVTHELVLRYSXXXXXXXXXXXGS------QVGVLWRLQRTDGD--GGAQAADDETGAFEGAAPDYFTWTAVPWSGYLVRGQEVTIQLVGTPPPPPDPSAVFAVYNGEVAAEFRVVTRTAAADSAAASVAAGVERTFYYCAAGSYWDGETCVTCAQAMATMADGEGSLDCSAPGITLDTLPLAEGYWRGDITQTYIRKCWNPSACAGGTGVITSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATASSFEYEDTRYCIKGHRGAYCAVCADGYRRFSGGQLCVSCGGVWSSGARATFWVLGVVSLVVVMALAVFLIGGLTAVSRASALQGKLSSCLLG--RRSKTVTASSSGSTLAPSRASRRAA-AGTVGLCLLRAVPFQKLKILV-VVWQILTQFSHLAEIPYPPSYQRFLNILDIFNFDITWPLTAACIVDNITFYHRLVWVTLGPLALLTFLSLTYVIAMHVHRRRNYFSSRASAEARQRAVVRHASAALLILFLVFSSVSTTVFSTFSCDYVEDLDVSLLRADYSISCDHPDHTFYKAYAALMILLYPIGVPMLFAVLLLKRRDKLNPPVMTL------DLAPETDPVLKGRV 1423
BLAST of mRNA_H-elongata_contig113.1055.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI) HSP 1 Score: 361 bits (926), Expect = 3.740e-98 Identity = 344/1185 (29.03%), Postives = 489/1185 (41.27%), Query Frame = 1
Query: 970 IAQNNSAGRSGGVLYLENARLVVAEGGASDGGVMWERNYAGYDGGVIAVDGGEVRLEGGFAKSNRAAQRGGVLFATGESVLSWTAGESFDNSAASGGS-LYISNSKVDLTDVRLMGDHTPSGGVLFFAGADARAINVSIIAPAELVGDFALQIDSDSVLRAFSCSFEMWSGDNSLI---VSEGELVLDACDFSQSSNSILFRA-LSPAVIRNAILGNKNYASAEN-SASTAFGSVAQTCSDLSEDYSCQSNEQEDSCLDAEYGMGVLCTAYIEAATGNNIVLSGVGSPVELVATSASAAPFSXXXXXXXXXXXXIVYYPDLVIHELTLRFSSGGGETSDSSTLNSSSWEGEDAVLWELRSFDGSEYGGSPISNGWFAGVSSDNFSWVAMPTSGVLMKDQEVTIRFVGSPSPPQDPTQPSAVYNGNVSAAFHV--LSRTAEAGSTTVSSANSFVASFYYCEAG--ASWNGEKCVLCVELTSAMVDGDGSLECDMPGVTLVTLPLAAGYWRGNMNSTNVQPCLLDDACKGGRGIVSSNSTSTNNYSEGDIYCETGYVGPYCAVCAEDFRRLSGYECFDCQSGWGEAARAAFWMVVALTPVLLVSLIMFLFDGATPFKQAKG--------------RADVPLVQ---------------ACQRHATDTAAE-------------------------RGDELEEG--------------------------------------------APSRHVAR----AKGLGARMR---RAIPFQKLKILIAVVWQILTQFSDLAEIPYPSTYERFLEMLDVFNFDTSWALSSMCLVSEINFYEKLVILTLAPIILLGAIGLSYAGAMRWHKGTGRNAIECRGQAKLRHASSALLVLFLVFSSVSTTIFSTFSCDYVEDLKVSMLRADYSISCDDQGHLFYQVYAGAMIFVYPIGIPFTFAYLLVKHRDKINPPAAVFVGPTPDQVRVEAFPRRRGRVVNPDEVFLADISTTGASATFRRVDRNRNVGQRADAGVREQRGSHGIDSSEDGGGGSGDGRVSEKEDVLKKRAQDLDLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQLAGACIFAFLTLLLSELMRPHLSQTDTWMYRTGCIAIFFSNFLGLMAKADLSGEEAQSQEVFGLLLIFVHVIMIMVVI 4179
+ +NNSA GG ++LE + E G E N AG GG I + V + A +G + TG + ++ A DN A +GGS L +S S V + V F AD I F + DS + W GD S G LVL++CDFS+SS ++ + S A IRNA++G+ + E + S A C ++ +C E C+ ++ +GVLC + NN G + L T + P Y PD V +LT+ ++ G + +W L ++ A+P+SGVL VTI G S QD G + + F V + A S T +FY CEA A +GE+ V C + ++DG ++C++PG T +LP+ AG+WR + S + CL DAC G IV+S D YC+ GY GPYCAVCAE + + G C C AA + + +FL G +G RA+ P + R D A E G++ +G AP+ VA ++GLG +++ +P KLKIL+ VVWQILT F + + YP +Y RFL +DV NFD S+ C + + FYE+L++ TLAPI L G + ++Y A R G G + R A RH ++ LL+ FLVF+S ST +F TF+CD S LRADY ISC H +Y+VYAG MI VYPIGIP +A++L ++RD +NP A G D E G RE E +D L+KR Q+ DL P+ FLW+ + P +YYE +ECGRR LLTGAL+F+ P+T Q A AC+FAF +LL EL+RPHL D+W+YR GC+ IF SNFL L+ KAD +GE ++S V G +++ +++ +I+ V+
Sbjct: 533 VFRNNSANFYGGFVHLEEEASLTCE------GATIEDNNAGDKGGGIYAE-TSVWVNSSCDLIGNGAPQGAATYLTGVTSANFEAHNVTDNVATAGGSVLGVSGSSVVMRGVN-------------FQSADGLQEETCI---------FGVHTDSTASXXXXXXXXGGWLGDTVFYHANPSAGSLVLNSCDFSESSTTMAVTSPYSDAEIRNALVGDLTIENVETVNDSLVLVDQAMGCGAVN---ACGPGE----CVGSD--LGVLCECLEDGVCLNN------GGAITL--TVSGDLPDE-------------TYRPDWVKFDLTVSAAANGTTPT----------------IWNLT-------------------YEAEKLDLNALPSSGVLPPGGNVTISVTGR-STEQD-------VGGGLISQFVVATVGSGTSADSATAGVGLEVETAFYLCEAFEYAMPDGEEQVTCEQCV--LLDGAEGVDCELPGATQTSLPVRAGHWRSSEESLVIHGCLHSDACVGATEIVTS-----------DDYCDGGYEGPYCAVCAEGYGKGVGNTCHSCTGSKARLLIAAGSVFFLVAXXXXXXAAVFLIGGLDAVASVRGSVARSLRVPGKTTTRAEQPFPPPGPTLPERSASARNISASRQVDDPAVEFDSGEVGGPITGGGFDAPDDLFGYDNGEDKSDGSIDFSDANLVLPLAIAGKDAAFCERFSVGGGGGSHPPVDADADAAPAEAVAGGQSGSRGLGEKIKGWASRVPLDKLKILV-VVWQILTVFPSITGVDYPPSYSRFLSWIDVVNFDVGHIFSASCALPFLTFYERLLLTTLAPIGLGGVLVVTYWMAKRT-AGIGSAGVLARRAAWSRHMAAGLLLTFLVFTSSSTIVFKTFACDDEAVEGESFLRADYGISCKTNKHAWYEVYAGVMIAVYPIGIPLLYAFILWRNRDSLNPRAYYSTGLELDGEMSE--------------------------------------------GPRETE--------------------EELQDRLEKRRQNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGALIFIAPHTVAQAAIACMFAFASLLGFELLRPHLDPADSWLYRLGCVVIFLSNFLALLIKADTAGEGSRS--VLGGIMVAINIFLILAVL 1534
BLAST of mRNA_H-elongata_contig113.1055.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI) HSP 1 Score: 359 bits (922), Expect = 8.290e-98 Identity = 366/1316 (27.81%), Postives = 542/1316 (41.19%), Query Frame = 1
Query: 754 GGLQFAFGCDVVIKGDVHFEQNTGVRGGAMYLDQSRAVISGRTIFINNTAERWGGAVMLLDSDSGLQLNGTVIAQNNSAGRSGGVLYLENARLVVAEGGASDGGVMWERNYAGYDGGVIAVDGGEVRLEGGFAKSNRAAQRGGVLFAT-GESVLSWTAGESFDNSAASGGSLYISNSKVDLTDVRLM---------------------GDHT--------------PSGGVLFFAGADARAINVSIIAPAELVGDFALQIDS-DSVLRAFSCSF-----------------------------EMWSGDNSLIVSEGELVLDACDFSQ-------SSNS-ILFRALSPAVIRNAILGNKNYASAENSASTAFGSVAQTCSDLSEDYSCQSNEQEDSCLDAEYGMGVLCTAYIE--AATGNNIVL--------------------SGVGSPVELVATSASAAPFSXXXXXXXXXXXXIVYYPDLVIHELTLRFSSGGGETSDSSTLNSSSWEGEDAVLWELRSFDGSEYGGSPISNGWFAGVSSDNFSWVAMPTSGVLMKDQEVTIRFVGSPSPPQDPTQPSAVYNGNVSAAFHVLSRTAEAGSTTVSSANSFVASFYYCEA----------GASWNGEKCVLCVELTSAMVDGDGSLECDMPGVTLVTLPLAAGYWRGNMNSTNVQPCLLDDACKGGRGIVSSNSTSTNNYSEGDIYCETGYVGPYCAVCAEDFRRLSGYECFDCQSGWGE---AARAAFWMVVALTPVLLVSLIMFLFDGATPFKQAKGRADVPLVQACQRHATDTAAER-------GDELEE----GAPSRH-----------VARAK---------------------------GLGARMRR---AIPFQKLKILIAVVWQILTQFSDLAEIPYPSTYERFLEMLDVFNFDTSWALSSMCLVSEINFYEKLVILTLAPIILLGAIGLSYAGAMRWHKGTGRNAIECRGQAKLRHASSALLVLFLVFSSVSTTIFSTFSCDYVEDLKVSMLRADYSISCDDQGHLFYQVYAGAMIFVYPIGIPFTFAYLLVKHRDKINPPAAVFVGPTPDQVRVEAFPRRRGRVVNPDEVFLADISTTGASATFRRVDRNRNVGQRADAGVREQRGSHGIDSSEDGGGGSGDGRVSEKEDVLKKRAQDLDLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQLAGACIFAFLTLLLSELMRPHLSQTDTWMYRTGCIAIFFSNFLGLMAKADLSGEEAQSQEVFGLLLIFVHVIMIMVVILEGYLTIKLQLHE 4218
GG F G D + D +N G A L S A + G T+F+NN+A + GG V+ DS ++ N V+ NN+AG +GG Y ++ A G + N Y V A G + +EGG +NRA GG L+AT G +V A S + + G++Y S +D+ GD T F +A I A GD I + D+ SC SG + + V+E ++ F SSNS I + + + + G S +A+ A GS+ D + + +S DA ++ IE A N++ L S +G E + + Y PDLV EL + S+T N G +W L FD +D S +P+SG+L ++ T+ GSP + G++ + F V S + +T ++FY C+A A+++ E+CV +DG L+C++PG TL +LP+ GYWR + S ++ C+ AC G I S+ YC GY GPYC VC E F R +G C C+ AA + F +V+ L +L V ++ D +++ V + H ++ + G E+EE GA SR V+ K G G +++R +P KLKIL+ VVWQIL+ F + + +P Y RFL +D+ +FD LS+ C+ ++FY+ L++ TL P+ + + L+Y A R G G R A RH ++ LL+ FLVF + ST F TF+CD S LRADYSI C H +Y+VYAG MI VYP+GIP +A++L ++R+ +NP RV+ G VVNP AD ST R+ N SED E+ L+KR ++ DL P+ FLW+ + P +YYE VECGRR LLTG LVF+ PNTA Q+A AC+FAF++LL EL+RPHL D+W+YR GC+ IF SNFL L+ K D SG + + +VFG ++I +++ +IM V+L + +++ + E
Sbjct: 290 GGALFG-GTDSAMAIDGVTLENNFTPGFAGALAASTATLGGNTLFMNNSAMQSGGGVLGWDSTGTVEFN-DVVCSNNTAGGNGGCFYGSGRGILNA-------GTLMRSNGGIYGASVFAFAGSYISVEGGNFTANRAVSSGGFLYATDGANVTIKGAAVSNNVADRRAGAVYCSGEFLDMGGXXXXXXXXXXXXXXXXXXXXXXVAWGDTTVVXXXXXXXXXXXXXXXXXFIFLEEEASLSCEGAIVQANTAGDQGGGIYARDATWVNSSCDLICNQAPQGAAAYLTSTVQVANFQNHTVFDTETSGSSVVYVTETSVIASDVSFQSGGSLQEDSSNSAIQLEGGATLIAEDCVFGGWTGDSVIQNANPAEGSLVLDSCDFGDTAAAMVVTSPNS--DARIRNALVGDLTIENAAVVNNSLALVDRTLGCDNLNICGSGECVDSALGVLCECLEDDECLGGGGALSIALKTPPPDVTYSPDLVYFELLV-----------SATAN-----GSTPAIWNLT-FD------------------ADELSLQVLPSSGILPPGEDATVLVTGSPQGQE--------VGGDLVSQFVVTSVGSGTPDSTTGVDVEVYSAFYLCQAFEYAMPVDDENAAFSCEQCV--------NIDGAEGLDCELPGATLASLPIREGYWRSSRESLSIHQCVHHTACVGATQISSAQD-----------YCGEGYQGPYCTVCTEGFGRGAGNTCHSCEGTKSRLLIAAGSLFALVILLLVILAVVYLVGGLDAVEGLRRSLSTRSVLSGRDSSSHKVGSSGKSIGRNALTGSEVEERRGEGAASRKGVTSVPISEVDVSEMKSDASSDTDGEDDHAPPMARGGDQPGCCGQGEKIKRWAARLPMDKLKILV-VVWQILSVFPSITAVDFPPAYARFLSWIDMLSFDLGHVLSASCVFPVMDFYQSLLLTTLGPLGVAMVLVLTYWIAKR-RAGAGSAGSLMRRAAWSRHMAAGLLLSFLVFIATSTMAFKTFACDDEAVEGKSYLRADYSIQCHTDKHEWYKVYAGVMIMVYPVGIPLLYAFILWQNRESLNP-------------RVKT-----GAVVNP----RADGSTD-------RITYKAN--------------------SED------------LEEKLEKRRRNPDLIPSMFLWKDFGPEIYYYEVVECGRRILLTGVLVFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCLCIFLSNFLALLIKVD-SGVDG-NHDVFGAIMIGINMFLIMAVLLASWFSMQQTMDE 1467
BLAST of mRNA_H-elongata_contig113.1055.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 358 bits (918), Expect = 8.190e-97 Identity = 315/1139 (27.66%), Postives = 482/1139 (42.32%), Query Frame = 1
Query: 1177 GGVLFATGESVLSWTAGESFDNSAASGGSLYISN-SKVDLTDVRLMGDHTPSGGVLFFAGADARAINVSIIAPAELVGDFALQIDSDSVLRAFSCSFEMWSGDNSLIVSEGELVLDACDFSQSSNSILFRA-LSPA-VIRNAILGNKNYASAENSASTAFGSVAQTCSD------LSEDYSCQSNEQEDS-CLDAEYGMGVLCTAYIEAATGNNIVLSGVGSPVELVATSASAAPFSXXXXXXXXXXXXIVYYPDLVIHELTLRFSSGGGETS--DSSTLNSSSWEGEDAVLWELRSFDGSEYGGSPISNGWFAGVSSDNFSWVAMPTSGVLMKDQEVTIRFVGSPSPPQDPTQPSAVYNG--NVSAAFH---VLSRTA-----------EAGSTTVSSANSFVASFYYCEAGASWNGE----------KCVLCVELTSAMVDGDGSLECDMPGVTLVTLPLAAGYWRGNMNSTNVQPCLLDDACKGGRGIVSSNSTSTNNYSEGDIYCETGYVGPYCAVCAEDFRRLSGYECFDCQSGWGEAARAAFWMVVALTPVLLVSLIMFLFDGATPFKQA-----------KGRADVPL---VQACQRHATDTA-AERGDELEEGAPSRHV----------------ARAKGLG---------------ARMRRAIPFQKLKILIAVVWQILTQFSDLAEIPYPSTYERFLEMLDVFNFDTSWALSSMCLVSEINFYEKLVILTLAPIILLGAIGLSYAGAMRWHK----------------GTGRNAIE-------CRG---------------------------------QAKL-----RHASSALLVLFLVFSSVSTTIFSTFSCDYVEDLKVSMLRADYSISCDDQGHLFYQVYAGAMIFVYPIGIPFTFAYLLVKHRDKINPPAAVFVGPTPDQVRVEAFPRRRGRVVNPDEVFLADISTTGASATFRRVDRNRNVGQRADAGVREQRGSHGIDSSEDGGGGSGDGRVSEKEDVLKKRAQDLDLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQLAGACIFAFLTLLLSELMRPHLSQTDTWMYRTGCIAIFFSNFLGLMAKADLSGEEAQSQEVFGLLLIFVHV 4158
GG ++A + L W +NSA G ++Y + + V L+ V + + G +F + V + +E A+Q D S A SF ++G+ ++ EGEL LD CDFS SS+++L A L A VIRNA+LG K Y EN A A + +D L+ D S S E S CL+ + +GV C Y +T + SG + L + + + +YP L+ EL L ++ + D +S S G + V W + +G + + W P++G+L+ + V ++ V +QP+ +NG N++ + LS TA E G TVS Y C+ G+ WN C LC E V+G ++C G T LP+ AGYWR + S ++ CL ++ACKGG + E YC GYVGP CAVC F + YEC C +G+ +L G + + R V L V + R +D G +E A S +R +G G A + A+P KLKI+I VVWQI + F+D+ + P+P YE+FL ++ +F+FD W LS+ CL + I+FY+KL+I+T+ P++ L +G+++ R K G+G +E C G Q +L RH + L+VL+LV++ +ST +F TF+C+++ ++ LRAD+ I CD Q H Y+ YAG M+ +YP+GIP F Y L++ R +INPP EA +RRG G H ++ + R +D + PT FLW Y P+ +YYE EC RR LLTG LVF++P+T GQ+A +CIFA L+L++ EL+RPH++ D +YRTGC+ I F+NFL L+ K+ + +++ + + L+ V++
Sbjct: 652 GGAIYAVDGANLEWEC-HLRENSALIGPAIYARDYAVVALSGVEVADNFVTRGSAIFVVNSALITSQVVVSDTSENPDLSAVQTDRLSTYIAEDTSFVGFAGEV-VVYGEGELYLDECDFSGSSSAVLVYAELEDATVIRNAVLGVKTY---ENIADDASDMLQLPSADRFINLNLTCDSSAVSPCGEGSWCLEGD--LGVYCERYQLRSTLEEVCASGDVDALTLTLIEDTESQRT--------------FYPSLIERELQLSLAASNATDAGDDDIATSSRSCAGANRVAWSV--------------SGLWPPSEEEQDDWTVFPSTGLLLPGESVRLQLV---------SQPNDAFNGFANITVRANDITALSTTASILASDAEPQSEGGDVTVS------VEHYLCDEGSFWNSSVSGADLDPTVACKLCTESIDGAVEG---VDCTSAGATTKELPIKAGYWRAKVTSLTIRECLNEEACKGGTTVA-----------EVQEYCNEGYVGPQCAVCGTGFGKGVAYECHPCTAGFQGGMYFLLAXXXXXXXXXXXXXXXYLVGGKSAVSSTVVSTKESALRIQHRGSVLLTRKVSSFGRARSDFGDLTEGPSVESSAVSTKAWGTEGKAAPTDVSVGGSRGQGTGGTGNDRDDDAPPTRVANLLAALPLSKLKIVI-VVWQITSAFADITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLCFLGITFFVGSRPAKETNMSPNATTADGGASGSGGRELEEGRVQGACSGSTTSVTANSGAAAREPSVRSALRAKSGDRKNPEQERLWGLFARHTTMMLIVLYLVYTQISTVVFQTFACEHLPEIGKRYLRADFGIECDTQRHTLYKAYAGVMMCIYPLGIPAVFLYFLLRQRSRINPPTD------------EALKKRRG-------------------------------------------GRHVVERK------------------MTVRDKDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNHIDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNI 1652
BLAST of mRNA_H-elongata_contig113.1055.1 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE) HSP 1 Score: 350 bits (898), Expect = 1.180e-96 Identity = 318/1119 (28.42%), Postives = 485/1119 (43.34%), Query Frame = 1
Query: 1066 VMWERNYAGYDGGVIAVDGGEVRLEGGFAKSNRAAQRGGVLFATGESVLSWTAGESFDNSAASGGSLYISN--SKVDLTDVRLMGDHTPSGGVLFFAGADARAINVSIIAPAELVGDFALQIDSDSVLRAFSCSFEMWSGDNSLIVSEGELVLDA--CDFSQSSNSILFRAL-SPAVIRNAILGNKNYASAENSASTAFGSV-AQTCSDLSEDYSCQSNEQEDSCLDAEYGMGVLCTAYIEAATGNNIVLSGVGSPVELVATSASAAPFSXXXXXXXXXXXXIVYYPDLVIHELTLRFSSGGGETSDSSTLNSSSWEGEDAVLWELRSFDGSEYGGSPISNGWFAGVSSDNFSWVAMPTSGVLMKDQEVTIRFVGSPSPPQDPTQPSAVYNGNVSAAFHVLSRTAEAGSTTVSSANSFV-----ASFYYCEA--------GASWNGEKCVLCVELTSAMVDGDGSLECDMPGVTLVTLPLAAGYWRGNMNSTNVQPCLLDDACKGGRGIVSSNSTSTNNYSEGDIYCETGYVGPYCAVCAEDFRRLSGYECFDCQSG---WGEAARAAFWMVVALTPVLLVSLIMFLFDGATPFKQAKGRA-----DVPLVQACQRHATDTAAERGDEL-----------EEGAPSRHVARAK----------------------------------GLGARMRR---AIPFQKLKILIAVVWQILTQFSDLAEIPYPSTYERFLEMLDVFNFDTSWALSSMCLVSEINFYEKLVILTLAPIILLGAIGLSYAGAMRWHKGTGRNAIECRGQAKLRHASSALLVLFLVFSSVSTTIFSTFSCDYVEDLKVSMLRADYSISCDDQGHLFYQVYAGAMIFVYPIGIPFTFAYLLVKHRDKINPPAAVFVGPTPDQVRVEAFPRRRGRVVNPDEVFLADISTTGASATFRRVDRNRNVGQRADAGVREQRGSHGIDSSEDGGGGSGDGRVSEKE------DVLKKRAQDLDLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQLAGACIFAFLTLLLSELMRPHLSQTDTWMYRTGCIAIFFSNFLGLMAKADLSGEEAQSQEVFGLLLIFVHVIMIMVVI 4179
++ N A GG + V G V G N + GG ++A G S L GE A S G+ ++ + V++ D + G + + D+ + S + G F SD+ +F W L ++ G + CDFS+S+ ++ + S A+IRNA++ ++ + EN+A V D C + E DS L GVLC E + + + G + L+ + + Y PD V EL L S+S +G +W L +++ +P+SG+L + VT+ GSP QD G++ + F V S + G T SS+++ + ++FY C+A G C CV ++DG ++C++PG TL +LP+ GYWR S V C+ ++C G + +S D YC +GY GPYCA C + G C C W A + F +V L L V ++ D ++ R+ +PL + + AA + EEG RH ++ K G+G +++R +P KLKIL+ VVWQILT F + +P Y +FL ++D N D S C++ ++FY++L++ T+ PI L G + L+Y A + G G ++ R A RH ++ LL+ FLVF+S ST +F TF+CD S LRADYS+SC+ H +Y+VYAG MI VYPIGIP +A++L +R+ +NP P+ V+ V D +G S R+ GG G KE + L+KR Q+ DL P+ FLW+ ++P +YYE +ECGRR LLTGAL+F+ P+TA Q A AC+FAF +LL EL+RPHL D+W+YR GC+ IF SNFL L+ K D +GE +S + G +LI V+V++++ V+
Sbjct: 16 ILCTENTAIGHGGCLYVAGVGVVNNGTVMVKNE-GKYGGCIYAYGGSDLEVLGGEFTACLATSNGAFMFASDGALVNVKDATVRNGVATRRGAVIYCSGDSFDLGGSQVTVEG--GTF-----SDNRALELGGAFVAWGTPTVLTITGGFFSNNTANCDFSESAAVMVVGSPHSDALIRNAVV---DHLTIENAALVNDSLVLVDNAFDCGTSGICAAGECVDSVL------GVLC----ECPSEDYCLNDGGALSISLLVHPLN-----------------VTYSPDPVYFEL----------------LVSASADGVTPAIWNLSH-------------------EAEDLGLQVLPSSGILSPGENVTVAVTGSPLR-QD-------VGGDLVSRFAVSSVGSSGGGTAESSSSTGLELEVESAFYLCQAFEYAVPVDGDDDTAVSCEQCV-----VIDGAEGVDCELPGATLASLPVREGYWRSGKESATVLACIHAESCAGATHVSTS-----------DDYCSSGYEGPYCASCQAGYGTGIGNTCHSCDGTRFRWLIFAGSLFTLVTLLVLGLAVVFLIGGLDAVEGVRRTVSRSLSVTTRLPLGRRSASVGSGAAAAAEGAVPGFAHSFTPAFEEGRGERHSSQGKQXXXXXXXXXTAMDSFNRPGEGWRKEDEKSAACCGIGEKIKRWTARLPMDKLKILV-VVWQILTVFPSITGAEFPPAYAQFLSIIDFINLDIGSIFSGTCILPRVSFYQRLLVTTVTPIGLAGVLLLTYTMA-KSRAGIGSASVVARKAAWSRHMAAGLLLTFLVFTSTSTVVFKTFACDDEAVEGESYLRADYSLSCNTATHTWYKVYAGVMIVVYPIGIPLLYAFILWINRESLNP---------------RPRPKATDDDVDETTVPAQDADASGWSVASRKA------------------------------GGXXXGEYVSKETPEELEERLQKRRQNPDLVPSMFLWKDFDPDMYYYEVIECGRRILLTGALIFIAPHTAAQAAMACMFAFASLLGFELLRPHLDPADSWLYRLGCVTIFLSNFLALLTKVDAAGESNRS--ILGGILIAVNVLLVVAVL 988
BLAST of mRNA_H-elongata_contig113.1055.1 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI) HSP 1 Score: 351 bits (901), Expect = 2.040e-96 Identity = 358/1271 (28.17%), Postives = 530/1271 (41.70%), Query Frame = 1
Query: 787 VIKGDVHFEQNTGVRGGAMYLDQSRAVISGRTIFINNTAERWGGAVMLLDSDSGLQLNGTVIAQNNSAGRSGGVLYLEN-------ARLVVAEGGASDGGVMWERNYAGYDGGVIAVDG-GEVRLEGGFAKSNRAAQRGGVLFATGESVLSWTAGESFDNSAASGGSLYISNSKVDLT-DVRLMGDHTPSGGVLFFA---GADARAINV-SIIAPAELVGDFALQIDSDSVLRAFSCSFEMWSGDNSLI---VSEGELVLDACDFSQSSNSILFRA-LSPAVIRNAILGNKNYASAENSASTAFGSV-AQTCSDLSEDYSCQSNEQEDSCLDAEYGMGVLCTAYIEAATGNNIVLSGVGSPVELVATSASAAPFSXXXXXXXXXXXXIVYYPDLVIHELTLRFSSGGGETSDSSTLNSSSWEGEDAVLWELRSFDGSEYGGSPISNGWFAGVSSDNFSWVAMPTSGVLMKDQEVTIRFVGSPSPPQDPTQPSAVYNGNVSAAFHVLSRTAEAGSTTVSSANSFVASFYYCEA-------------GASWNGEKCVLCVELTSAMVDGDGSLECDMPGVTLVTLPLAAGYWRGNMNSTNVQPCLLDDACKGGRGIVSSNSTSTNNYSEGDIYCETGYVGPYCAVCAEDFRRLSGYECFDCQSGWGEAARAAFWMVVALTPVLLVSL-IMFLFDGATPFKQAK---------------------------------------------------GRADVPLVQACQRHATDTAAERGDELEEGAPSRHVARAK------------------------------GLGARMRR---AIPFQKLKILIAVVWQILTQFSDLAEIPYPSTYERFLEMLDVFNFDTSWALSSMCLVSEINFYEKLVILTLAPIILLGAIGLSYAGAMRWHKGTGRNAIECRGQAKLRHASSALLVLFLVFSSVSTTIFSTFSCDYVEDLKVSMLRADYSISCDDQGHLFYQVYAGAMIFVYPIGIPFTFAYLLVKHRDKINPPAAVFVGPTPDQVRVEAFPRRRGRVVNPDEVFLADISTTGASATFRRVDRNRNVGQRADAGVREQRGSHGIDSSEDGGGGSGDGRVSEKEDVLKKRAQDLDLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQLAGACIFAFLTLLLSELMRPHLSQTDTWMYRTGCIAIFFSNFLGLMAKADLSGEEAQSQEVFGLLLIFVHVIMIMVVILEGYLTIKLQLHEESATNDQNQLA 4251
V G+ ++TG GG MY+ V + NN AER G V S L G +V GG + N A + GG I ++ + EG + + A +GG ++ + ++ + + N+A G ++Y++++ + D + D+ SGG +F+A A +N S + E + A+Q++ ++ L A C F W GD + + G L LD+CDFS+S+ ++ + S +IRNAI+ ++ + EN+A V D C + E DS L GVLC E L G G+ ++ AP + Y PD V EL L S+S +G +W L +++ +P+SG+L + VT+ GSP QD V V++A S TAE+ ++FY C+A V+C++ A +DG L+C+ PG TL ++P+ GYWR + S V CL DAC G I SS D YC+ Y GPYCAVCAE S + C C SG +V +T VL + + I+FL G + GR+ A T TAA G + +P R ++ A GLG R++R +P KLKIL+ VVWQILT F + + +P +Y RFL +DV N D ++ CL+ ++FY++L++ TL PI L + L++ A G G ++ R A RH ++ LL+ FLVF+S ST F TF CD S LRADYS+SC H++Y++YAG MI VYPIGIP +A++L +RD +NP +VR EA P+ G V + A+ GDG ++ L +R ++ DL P+ FLW+ + P +YYE +ECGRR LLTG L+F TA Q A ACIFAF++LL EL+RPHL D W+YR GC+ IF SNFL L+ K D +GE ++ G +LI V+V +I+ V+ + + + + N++N LA
Sbjct: 53 VNGGEFRGCRSTG-NGGFMYVSDGGTVTITGGLVANNVAERRAGVVY--SSGDSNDLGGAXXXXXXXXXXXXXXXXXXXXXXXXXXTNVVTVTGG------YFVNNTAKFYGGFIFLEEEASLSCEGATIRDHSAGDQGGGIYGRDAAWVNSSC-DLIGNAAPQGAAVYLTHTVMAANFDNHEVTDNVASGGSVFYATDTALFATGLNFQSGVGLQEDSSNRAIQLEGETTLVAEGCVFGGWMGDTVIRNANTAPGSLTLDSCDFSESAAVMVVTSPQSDTIIRNAIV---DHLTIENAALVNDSLVLVDNAFDCGTPGICAAGECVDSVL------GVLCECLSEG-----YCLDGGGA----LSVDVLTAP------------PNVTYSPDPVYFEL----------------LVSASADGVTPAIWNLSH-------------------EAEDLGLQVLPSSGILPPGENVTVAVTGSPL--QDDVGGVLVTRFVVTSAG---SGTAESXXXXXXVELEVESAFYLCQAFEYAMPVDSEXXXXXXXPDAASVVCLQC--ANLDGAEGLDCESPGATLASMPVREGYWRSSQESLVVHGCLHSDACAGATQISSS-----------DDYCKDCYEGPYCAVCAEGCCEGSSHTCHRC-SGIKSRLLMFAGIVFGVTIVLFLGVAIVFLIGGLDAVDSVRLSMSRKLSISGKPRGGISRSHHEGTSSISSKRPSGRSNFGGDXXXXXXXXRGRSAAVGNAAVDEEKTRTAAVAGLGPGDYSPERRLSAAATAAAIDRARILEAGARMSDAGGESARTGCCGLGGRIKRWVSLLPMDKLKILV-VVWQILTVFPSITGVQFPPSYSRFLSWIDVVNLDVGHVFTASCLLPSVSFYQRLLLTTLTPIGLGCVLVLTHWMAKE-RAGIGSASVLARKAAWSRHMAAGLLLTFLVFTSASTMAFKTFPCDDEAVEGESYLRADYSLSCKTDKHMYYRIYAGIMIVVYPIGIPLLYAFILWINRDSLNP-----------RVRSEAIPQPTGAVEKKVSLVPANY---------------------------------------------GDGL----QERLDQRRRNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADMWLYRLGCVIIFLSNFLALLIKVDAAGEG--NRAALGGILIAVNVFLILAVLSTSWFATQQMVDDNR--NEENSLA 1163
BLAST of mRNA_H-elongata_contig113.1055.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE) HSP 1 Score: 353 bits (905), Expect = 1.560e-95 Identity = 336/1149 (29.24%), Postives = 504/1149 (43.86%), Query Frame = 1
Query: 1129 VRLEGGFAKSNRAAQRGGVLFATGESVLSWTAGESFDNSAASGGSLYISNSKV--DLTDVRLMGDHTPSGGVLFFA---GADARAINV-SIIAPAELVGDFALQIDSDSVLRAFSCSFEMWSGDNSLIVSE---GELVLDACDFSQSSNSILFRAL-SPAVIRNAILGNKNYASAENSASTAFGSV-AQTCSDLSEDYSCQSNEQEDSCLDAEYGMGVLCTAYIEAATGNNIVLSGVGSPVELVATSASAAPFSXXXXXXXXXXXXIVYYPDLVIHELTLRFSSGGGETSDSSTLNSSSWEGEDAVLWELRSFDGSEYGGSPISNGWFAGVSSDNFSWVAMPTSGVLMKDQEVTIRFVGSPSPPQDPTQPSAVYNGNVSAAFHVLSRTAEAGSTTVSSANS------FVASFYYCEA---------GASWNGEKCVLCVELTSAMVDGDGSLECDMPGVTLVTLPLAAGYWRGNMNSTNVQPCLLDDACKGGRGIVSSNSTSTNNYSEGDIYCETGYVGPYCAVCAEDFRRLSGYECFDCQSGWGEAARAAFWMVVALTPVLLVSL-IMFLF--------------------------------DGATPFKQAKGRADV--------------------------------------------PLVQACQRHATDTAA--ERGDELEEGAPSRHVARAKGLGARMRR---AIPFQKLKILIAVVWQILTQFSDLAEIPYPSTYERFLEMLDVFNFDTSWALSSMCLVSEINFYEKLVILTLAPIILLGAIGLSYAGAMRWHKGTGRNAIECRGQAKLRHASSALLVLFLVFSSVSTTIFSTFSCDYVEDLKVSMLRADYSISCDDQGHLFYQVYAGAMIFVYPIGIPFTFAYLLVKHRDKINPPAAVFVGPTPDQVRVEAFPRRRGRVVNPDEVFLADISTTGASATFRRVDRNRNVGQRADAGVREQRGSHGIDSSEDGGGGSGDGRVSEKEDVLKKRAQDLDLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQLAGACIFAFLTLLLSELMRPHLSQTDTWMYRTGCIAIFFSNFLGLMAKADLSGEEAQSQEVFGLLLIFVHVIMIMVVILEGYLTIKLQLHEESATNDQNQLA 4251
+ EG + + A +GG ++ + ++ + + N+A G ++Y++++ + + T+ + D+ SGG + +A A +N S + E + A+Q++ ++ L A C F W GD + S G L LD+CDFS+S+ ++ + S A+IRNA++ ++ + EN+A V D C + E DS L GVLC E + L+ G+ ++ S P + + Y PD V EL L S+S +G +W L +D+ +P+SG+L + VT+ G+P QD G + F V S AGS T S++S + FY C+A N C+ C A DG L+C+ PG TL +LP+ GYWR + S V CL DAC GG I SS D YC+ Y GPYCAVCAE S + C+ C SG +V +T VL + L I+FL +G++ K+ GR++ PL A A D A E G + + GLG R++R +P KLKIL+ VVWQILT F + + +P +Y RFL +DV N D ++ CL+ ++FY++L++ TL PI L + L++ A + G G ++ R A RH ++ LL+ FLVF+S ST F TF CD S LRADYS+SC H+++++YAG MI VYPIGIP +A++L +R+ +NP +VR EA P+ G V D++ A+ +G D E+ L++R + DL P+ FLW+ + P +YYE +ECGRR LLTG L+F TA Q A ACIFAF++LL EL+RPHL D W+YR GC+ IF SNFL L+ K D +GE ++ G +LI V+V +I+ V+ + + + + N++N LA
Sbjct: 519 LSCEGATIRDHYAGDQGGGIYGRDATWVNSSC-DLIGNAAPQGAAVYLTHTVMAANFTNHEVT-DNVASGGSVLYATETAVFATGLNFQSGVGLQEDSSNRAIQLEGETTLVADGCVFGGWMGDTVIRNSNTAPGSLTLDSCDFSESAAVMVVGSPHSDALIRNAVV---DHLTIENAALVNDSLVLVDNAFDCRTSGICAAGECVDSVL------GVLCECLSE-----DYCLNDGGA----LSISLLVHPLN------------VTYSPDPVYFEL----------------LVSASADGVTPTIWNLS-------------------YEADDLGLQVLPSSGILPPGENVTVAITGNPL--QDDV------GGVLVTRFVVTS----AGSGTAESSSSTGVELEVKSEFYLCQAFEYAMPVDGDDDDNDPVCLQC-----ANFDGAEGLDCESPGATLASLPVREGYWRSSQESLVVHGCLNSDACAGGTQISSS-----------DDYCKDCYEGPYCAVCAEGCCEGSSHTCYRC-SGIKSRLLMFAGIVFGVTIVLFLGLAIVFLIGGLDAVNSMRLSMSRKLSVSGKIRGSISRSYHEGSSTSKKPSGRSNFGEDDXXXXXXXXXSAAVGDAAVDEEKTRTAAVIGLGPGDYSPERPLSTAATAAAVDRARILEVGARMSDAGGESSRTGCCGLGGRIKRWVSLLPMDKLKILV-VVWQILTVFPSITGVQFPPSYSRFLSWVDVVNLDVGQVFTASCLLPSVSFYQRLLLTTLTPIGLGCVLVLTHWMAKQ-RAGIGSASVLARRAAWSRHMAAGLLLTFLVFTSTSTMAFKTFPCDDEAVEGESYLRADYSLSCKTDKHMYFRIYAGIMILVYPIGIPLLYAFILWINRESLNP-----------RVRSEATPQPTGGVE-------MDVALVPAN--------------------------YGDDL----------------EERLEQRRNNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADAWLYRLGCVIIFLSNFLALLIKVDAAGEG--NRAALGGILIAVNVFLILAVLSTSWFATQQMVDDNR--NEENSLA 1505
BLAST of mRNA_H-elongata_contig113.1055.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI) HSP 1 Score: 352 bits (902), Expect = 3.920e-95 Identity = 300/1131 (26.53%), Postives = 470/1131 (41.56%), Query Frame = 1
Query: 1177 GGVLFATGESVLSWTAGESFDNSAASGGSLYI-SNSKVDLTDVRLMGDHTPSGGVLFFAGADARAINVSIIAPAELVGDFALQIDSDSVLRAFSCSFEMWSGDNSLIVSEGELVLDACDFSQSSNSILFRA-LSPA-VIRNAILGNKNYASAENSAST--------AFGSVAQTCSDLSEDYSCQSNEQEDSCLDAEYGMGVLCTAYIEAATGNNIVLSGVGSPVELVATSASAAPFSXXXXXXXXXXXXIVYYPDLVIHELTLRFSSGGGETSDSSTLNSSSWE--GEDAVLWELRSFDGSEYGGSPISNGWFAGVSSDNFSWVAMPTSGVLMKDQEVTIRFVGSPSPPQDPTQPSAVYNGNVSAAFHVLSRTAEAGSTTVSSANSFVAS----------FYYCEAGASWNGE----------KCVLCVELTSAMVDGDGSLECDMPGVTLVTLPLAAGYWRGNMNSTNVQPCLLDDACKGGRGIVSSNSTSTNNYSEGDIYCETGYVGPYCAVCAEDFRRLSGYECFDCQSGWGEAARAAFWMVVALTPVLLVSLIMFLFDGATPFKQA-----------KGRADVPLVQACQRHATD---------------TAAERGDELEEGAPSRHVARAKGLG-----------------ARMRRAIPFQKLKILIAVVWQILTQFSDLAEIPYPSTYERFLEMLDVFNFDTSWALSSMCLVSEINFYEKLVILTLAPIILLGAIGLSYAGAMRWHKGTG-------------------------------------------------RNAIECR-GQAK-----------LRHASSALLVLFLVFSSVSTTIFSTFSCDYVEDLKVSMLRADYSISCDDQGHLFYQVYAGAMIFVYPIGIPFTFAYLLVKHRDKINPPAAVFVGPTPDQVRVEAFPRRRGRVVNPDEVFLADISTTGASATFRRVDRNRNVGQRADAGVREQRGSHGIDSSEDGGGGSGDGRVSEKEDVLKKRAQDLDLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQLAGACIFAFLTLLLSELMRPHLSQTDTWMYRTGCIAIFFSNFLGLMAKADLSGEEAQSQEVFGLLLIFVHV 4158
GG ++A + L W +NSA G ++Y N+ V L V + + G +F + V + +E A+Q D+ S A F ++G+ ++ SEGEL LD CDFS SS+++L A L A VIRNA+LG NY + AS +F ++ TC+ S C CL+ + +GV C Y +T + SG + L + + + +YP L+ EL L F+ +D + +SS G V W + +G + + W P++G+L+ + V +R V +QP+ +NG + TA + + ++ ++N+ S +Y+C+ G WN C LC E ++G ++C G T LP+ AGYWR N+ S ++ C + ACKGG + E YC GYVGP CAVC F + EC C +G+ + ++L G + + R V L ++ D + G E + P +++G G A + A+P KLKI+I D+ + P+P YE+FL ++ +F+FD W LS+ CL + I+FY+KL+++T+ P++ L +G+++ R K T RN + + GQ K RH + L+VL+LV++ +ST +F TFSC+ + ++ S LRAD+ I CD Q H Y+ YAG MI +YP+GIP F Y LV+ R +INPP EA +RRG G H V+E++ + R QD + PT FLW Y P +YYE EC RR LLTG LVF++P+T GQ+A +CIFA ++L++ EL+RPH++ D +YRTGC+ I F+NFL L+ K+ + +++ + + L+ V++
Sbjct: 431 GGAIYAIDGANLEWAC-HIRENSALIGPAIYARDNAVVALRGVEVSDNFVTRGSAIFLVNSTFITSQVVVNDTSENSDLSAVQTDALSTYTAQDTCFVGFAGEV-VVYSEGELYLDECDFSGSSSAVLVYAELEDATVIRNAVLGANNYETIAEDASEMLQLPSADSFINLNLTCNSSSAVSPCGVGSW---CLEGD--LGVYCEHYQLRSTLEEVCASGDVDALTLTLIEDTESQPT--------------FYPSLLERELQLSFAPSNATNADDDDIATSSRSCVGASRVAWSV--------------SGLWPSSEEEQDDWTVFPSTGLLLPGESVRLRLV---------SQPNDAFNGLANITVRANDITALSTTASILASNTEPQSEGGDVTVGVEYYFCDEGNFWNSSVSGADLDPTVACTLCTESIDGAIEG---VDCASAGATTTELPIKAGYWRANVTSLTIRECFNEGACKGGTTVA-----------EVQEYCNEGYVGPQCAVCETGFGKGMADECHSCTAGFKGGMYFLLAVXXXXXXXXXXXXXIYLVGGKSAVSSTVVNTKESALRIQHRGSVLLTRSVDNARPDFGGLSDGPPIGGSAVSTNSPGTEHKAAPPEVSAGQSRGQGNSRAGNDKDDDASPRRVANLLTALPLSKLKIVI-----------DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLMVTIGPLLPLCFLGITFFVGSRPAKKTNMSPNTTAGGGATSGSRVGEVEEGRVQGASSRSMASVMAIGGATARAQSVRNLLRAKSGQQKNPEQERLWGLFARHTTIMLIVLYLVYTQISTVVFQTFSCEDLPEIGKSYLRADFRIECDTQRHTLYKAYAGVMICIYPLGIPAIFFYFLVRQRSRINPPTD------------EALKKRRG-------------------------------------------GRH----------------VAEQK--MTVRDQDQSIAPTSFLWSAYFPTCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAIVSLMVFELLRPHVNNLDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNI 1419
BLAST of mRNA_H-elongata_contig113.1055.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI) HSP 1 Score: 313 bits (802), Expect = 1.280e-82 Identity = 321/1215 (26.42%), Postives = 481/1215 (39.59%), Query Frame = 1
Query: 1177 GGVLFATGESVLSWTAGESFDNSAASGGSLYI-SNSKVDLTDVRLMGDHTPSGGVLFFAGADARAINVSIIAPAELVGDF-ALQIDSDSVLRAFSCSFEMWSGDNSLIVSEGELVLDACDFSQSSNSILFRAL--SPAVIRNAILGNKNYASAENSASTAFG--------SVAQTCSDLSEDYSCQSNEQEDSCLDAEYGMGVLCTAYIEAATGNNIVLSGVGSPVELVATSASAAPFSXXXXXXXXXXXXIVYYPDLVIHELTLRFSSGGGETSDSSTLNSSSWEGEDAVLWELRSFDGSEYGGSPISNGWFAGVSSDN--FSWVAMPTSGVLMKDQEVTIRFVGSPSPPQDPTQPSAVYNGNVSAAFHV------LSRTAEAGSTTV-------------SSANSFVASFYYCEAGASWNGE-----KCVLCVELTSAMVDGD-GSLECDMPGVTLVTLPLAAGYWRGNMNSTNVQPCLLDDACKGGRGIVSSNSTSTNNYSEGDIYCETGYVGPYCAVCAEDFRRLSGYECFDCQSGWGEAARAAFWMVVALTPVLLVSLIMFLFDG--ATPFKQAKGRADVPLVQ------------------------ACQRHATD------TAAERGDELEEGAPSRHVA--------------------------------RAKGLG----------------ARMRRA-----------------------------------------------------------------------------------------IPFQKLKILIAVVWQILTQFSDLAEIPYPSTYERFLEMLDVFNFDTSWALSSMCLVSEINFYEKLV--------ILTLAPIILLGAIGLSYAGAMR-WHKGTGRNA-IECRGQAKL--RHASSALLVLFLVFSSVSTTIFSTFSCDYVEDLKVSMLRADYSISCDDQGHLFYQVYAGAMIFVYPIGIPFTFAYLLVKHRDKINPPAAVFVGPTPDQVRVEAFPRRRGRVVNPDEVFLADISTTGASATFRRVDRNRNVGQRADAGVREQRGSHGIDSSEDGGGGSGDGRVSEKEDVLKKRAQDLDLQPTKFLWEPYEPRNFYYETVECGRRCLLTGALVFVLPNTAGQLAGACIFAFLTLLLSELMRPHLSQTDTWMYRTGCIAIFFSNFLGLMAKADLSGEEAQSQEVFGLLLIFVHVI 4161
GG ++A + L W + +NSA +G ++Y N++V L V L + G V+F ++ ++ E D A+Q D DS +A SF ++G+ +++ SEG L LD CDFS S+ S+L + S V+RNA+LG+ NY +AS A SV TC S + C+D + +GV C Y ++ GSP E T + P + YP ++ +L L + D T+ +SS G V L + G+E G I N +SS+ W P++G+L+ + +T+ V T P +NG + +F S AEA + V ++A SF SF +CE+G WN V C EL + VDGD + CD G T TLP+ +GYWR +++S ++ C +DAC+GG + S YC GY GP CAVCA + R C C + + + LT + L ++L G A R V ++Q + H T + E D E G R + KG G AR R A +P KLKI++ VVWQI F+++ ++P+P YE+FL ++ +F+FD W +S+ CL + I+FY+KL+ + A G + A R W G G + +E +L RH + L++L+LV++ VST +F F+C+ ++ S LRAD+ I CD H Y++YA MI + +F Y L + R +INPP D G+++QRG + V EK + +R D + PT FLW Y P +YYE EC RR LLTG LVF++P+T GQ+A C+FAFL+LL EL+RPH D +YRTGC+ IFF+NFL LM KA+++ +++ EV+ ++LI V+V+
Sbjct: 557 GGAVYAVEGAKLEWGC-DLVNNSALAGPAIYARDNAEVVLRGVELYDNVVARGSVVFIVSSNLTTYQ-TVFTDTEGSSDLSAVQADEDSSYKAEDTSFVGFAGE-AVVFSEGILYLDDCDFSGSAASVLVYSERNSTTVVRNAVLGDNNYFDVAEAASEAGDIPTAHSLISVNVTCDGWMPFSSTPPCSEGSPCIDGD--LGVYCQCYTRESS------IAEGSPSE---TCVTGDPGLLSLTVLSEPADAV--YPTMLDGDLLLTLN-------DDETVTTSSSAGGSGVA--LSAGAGTE--GGVIWNVSALVLSSEEGLMEWTVFPSTGLLLPGRSITLHVV---------TLPLDDFNGEATVSFQADGMSPPASLVAEAAAAVVVQTTSLADDGEGETAAASFDVSFVHCESGTYWNNSCDPEGDSVSCCELCTD-VDGDEDGVNCDENGATTRTLPIQSGYWRASLDSVYIRQCFNEDACQGGSIVASEQE-----------YCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFHFSASGGGSSGGHPTKGSSALKSVGEESDGGESGGSGRFLGAWGRRKSASIGAPPPGAITTSSAAGSGPSSSVNDKGAGSKADSAGTVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLQPSAAPAVRGPXXXXXXXXXXXXXXXXXXXXXXXXXAARIGEMLARLPLSKLKIVV-VVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLLRGKGASRTAMAAAAAAERARQGRARPSARRVWRNGPGDESDLEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICI-------SFWYFLTRQRSRINPPT--------------------------------------------------------DKGLKDQRGRKHV--------------VDEK---MNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVL 1642 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig113.1055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig113.1055.1 >prot_H-elongata_contig113.1055.1 ID=prot_H-elongata_contig113.1055.1|Name=mRNA_H-elongata_contig113.1055.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1465bp MTLQNGWGGDDGGGGILASEGATLIGESCLWESLSTFGYGGGAIAAIDAAback to top mRNA from alignment at H-elongata_contig113:11596..26184- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig113.1055.1 ID=mRNA_H-elongata_contig113.1055.1|Name=mRNA_H-elongata_contig113.1055.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=14589bp|location=Sequence derived from alignment at H-elongata_contig113:11596..26184- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig113:11596..26184- >mRNA_H-elongata_contig113.1055.1 ID=mRNA_H-elongata_contig113.1055.1|Name=mRNA_H-elongata_contig113.1055.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=8790bp|location=Sequence derived from alignment at H-elongata_contig113:11596..26184- (Himanthalia elongata Himel1 dioecious)back to top |