mRNA_H-elongata_contig11241.1010.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11241.1010.1
Unique NamemRNA_H-elongata_contig11241.1010.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig11241.1010.1 vs. uniprot
Match: A0A6H5KJA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA8_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 4.650e-84
Identity = 147/262 (56.11%), Postives = 171/262 (65.27%), Query Frame = 1 
Query: 1114 SNLGGLFRRPGVVYPIHPTGHMRLPRPSSRRKFGSNAAE-----------------------------------DGRRRVVRFVVQGKLESIRRDYRALFSCLEDMCLSGREEFKIDAVGSSGSVQNELDSHPCTNARYKEGRDLRYPDFYTVISAGHFVVTATAGHDYEFDRATSSVPTALLLERPLVMSSTLLAAYPCLRNSRIHSMVANDNLCLNLQSAYDLTEAEYDEMELEARDCKLQMWRQTRETVAEMVSGWVLD 1794
            S  G LFRRPGVVYPIHPTGH+RLPRP  +R F                                           R   V FVVQG ++S RR+Y  L  CLE MC +GR+ +++ AVG+ G + +++    C   R  E R L YP+FY  ISA HFVVTA AGHDYE+D+ATS+VPTALLLERPLV+SSTLL AYPCLR SR+HSMVAND+LCLNLQ+AYDLT  EYDEMELEARDCKL+MWR  RETVA M SGW LD
Sbjct:    6 STFGALFRRPGVVYPIHPTGHLRLPRP--KRPFAGQQQRWRRHLSGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEDVVFVVQGNMQSHRRNYPELTRCLEAMCSTGRDNYQLVAVGARGDLPDDVRRMQCVEQRTTEWRHLEYPEFYANISAAHFVVTAAAGHDYEYDKATSTVPTALLLERPLVISSTLLDAYPCLRKSRVHSMVANDDLCLNLQTAYDLTTEEYDEMELEARDCKLEMWRHARETVAGMASGWTLD 265
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BLAST of mRNA_H-elongata_contig11241.1010.1 vs. uniprot
Match: D8LSI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI3_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 3.430e-70
Identity = 115/174 (66.09%), Postives = 138/174 (79.31%), Query Frame = 1 
Query: 1273 LESIRRDYRALFSCLEDMCLSGREEFKIDAVGSSGSVQNELDSHPCTNARYKEGRDLRYPDFYTVISAGHFVVTATAGHDYEFDRATSSVPTALLLERPLVMSSTLLAAYPCLRNSRIHSMVANDNLCLNLQSAYDLTEAEYDEMELEARDCKLQMWRQTRETVAEMVSGWVLD 1794
            ++S RR+Y  L  CLE MC +GR+ +++ AVG+ G + +++ +  C   R  E R L YP+FY  ISAGHFVVTA AGH YE+D+ATS+VPTALLLERPLVMSSTLL AYPCLR SR+HSMVAND+LC+NLQ+AYDLT  EYDEMELEARDCKL+MWR  RETVA M SGW LD
Sbjct:    1 MQSHRRNYPELTRCLEAMCSTGRDNYQLVAVGARGDLPDDVSAMQCVEQRTTEWRHLEYPEFYANISAGHFVVTAAAGHGYEYDKATSTVPTALLLERPLVMSSTLLDAYPCLRKSRVHSMVANDDLCVNLQTAYDLTREEYDEMELEARDCKLEMWRHARETVAGMASGWTLD 174
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BLAST of mRNA_H-elongata_contig11241.1010.1 vs. uniprot
Match: D8LSI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI2_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 5.330e-27
Identity = 79/187 (42.25%), Postives = 94/187 (50.27%), Query Frame = 1 
Query:  757 FDVSVLCTVFKDLEVLFNNRHPMDPRLVDALLWNTKVTIWNVHSVTRAL-ANGVVPTEAQAFARKTPSAD-----GRIPPPTFLTVFGEHVETWERWLEQAYEGWEERPESKSRVETAP----------------------------------EQYHRG-SNLGGLFRRPGVVYPIHPTGHMRLPRP 1194
            FD+SVLCT   D+  L    +P+DPRL DALLW+  V+IWNVHSV  A  ++  +P     FAR  PS+      GR PP TFLT++GE    WERW E+AYEGW                                                +   RG S  G LFRRPGVVYPIHPTGH+RLPRP
Sbjct:  535 FDLSVLCTAVNDVNHLLKATYPVDPRLADALLWDVDVSIWNVHSVEGAFRSDHRMPPAVDDFARGVPSSSERGGGGRTPPLTFLTLYGE----WERWSEEAYEGWGXXXXXXXXXXXXXXXXXXXXXXXXGQGAEGXXXXXXXXXXXXXAGYLDDMERGNSTFGALFRRPGVVYPIHPTGHLRLPRP 717
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BLAST of mRNA_H-elongata_contig11241.1010.1 vs. uniprot
Match: A0A6H5KKJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ1_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.550e-20
Identity = 54/88 (61.36%), Postives = 63/88 (71.59%), Query Frame = 3 
Query:  228 GPTSESLMLRNRWDLQLWDYAESLIMSRSTTLESYLCSTQKSTTKQ--PGAGRRAAVYNSPDFHATSLAMFSCVLVSLGFHVTAIVQE 485
            G     L+  NRWDLQLWD+A  L+ SRSTT E YLC +  S  +Q  PG GRRA VYNSP FH T +AMFSCVL+SLGF VTA+V+E
Sbjct:  222 GKEGGKLLRDNRWDLQLWDFAHKLVESRSTTAEGYLCGSSTSARRQRMPGDGRRAVVYNSPSFHVTGVAMFSCVLMSLGFDVTAVVKE 309
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BLAST of mRNA_H-elongata_contig11241.1010.1 vs. uniprot
Match: A0A482SI13_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SI13_9ARCH)

HSP 1 Score: 72.4 bits (176), Expect = 4.640e-11
Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 1 
Query: 1435 RDLRYPDFYTVISAGHFVVT-ATAGHDYEFDRATSSVPTALLLERPLVMSSTLLAAYPCLRNSRIHSMVANDNLCLNLQSAYDLTEAEYDEMELEARDCK 1731
            R + +P FY  I+   F+VT A   ++Y   RA+SS+PTA++ E PLV+++ LL  Y CL    IH  VA+ + C  L++A  LT+ E   M  E R CK
Sbjct:   15 RAVAHPYFYGAIARADFLVTFANPAYEYNITRASSSIPTAVMTEVPLVLTTDLLNKYDCLYGGSIHRRVADTDDCKALKNAIQLTDQERKTMREEIRRCK 114
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BLAST of mRNA_H-elongata_contig11241.1010.1 vs. uniprot
Match: A0A482SHX3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHX3_9ARCH)

HSP 1 Score: 71.6 bits (174), Expect = 2.750e-9
Identity = 47/184 (25.54%), Postives = 92/184 (50.00%), Query Frame = 1 
Query: 1249 VRFVVQGKLE-SIRRDYRALFSCLEDMCLSGREEFKIDAVGSSGSVQNELD-----SHPCTNARYKEGRDLRYPDFYTVISAGHFVVTATAGHDYEFDRATSSVPTALLLERPLVMSSTLLAAYPCLRNSRIHSMVANDNLCLNLQSAYDLTEAEYDEMELEARDCKLQMWRQTRETVAEMVSG 1782
             RF++QG L    RRD+  LF+C+ +  +  R + ++  +G   ++   L      S+  T  ++ +     Y  F+  +S+  + +  +    YE  R TSS+PT+L+   P+++ + LL+ Y CLRN  +H   +  + C ++++   L      +M  E   C  Q+  ++R T+ ++V G
Sbjct:  212 TRFILQGILTPGKRRDFNRLFACMIE--IKRRHDIELVLIGKVATLGANLTIPLKLSNITTVVKWPD-----YLGFFRNVSSADYAILFSKFDFYEHGRITSSIPTSLVSNLPIILPNKLLSDYACLRNQYVHRATSMADDCSSVKAVLSLRHERQQQMRNEVAFCVKQLLIESRATLHDIVFG 388
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11241.1010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KJA8_9PHAE4.650e-8456.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSI3_ECTSI3.430e-7066.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSI2_ECTSI5.330e-2742.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKJ1_9PHAE1.550e-2061.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482SI13_9ARCH4.640e-1141.00Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A482SHX3_9ARCH2.750e-925.54Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11241contigH-elongata_contig11241:237..7510 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score60.5
Seed ortholog evalue1.9e-06
Seed eggNOG ortholog63577.G9NDZ3
EggNOG OGs21EIS@147550,2A9JI@1,2RYIU@2759,3A1C7@33154,3P275@4751,3QUT5@4890,3TKKF@5125,3U0XF@5129
Best tax levelHypocreaceae
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-09_001750.1
Exons13
Model size2808
Cds size1086
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929645.7328231-UTR-H-elongata_contig11241:236..5111622929645.7328231-UTR-H-elongata_contig11241:236..511Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11241 237..511 +
1691679103.8213687-UTR-H-elongata_contig11241:236..5111691679103.8213687-UTR-H-elongata_contig11241:236..511Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11241 237..511 +
1622929645.7509074-UTR-H-elongata_contig11241:823..9131622929645.7509074-UTR-H-elongata_contig11241:823..913Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11241 824..913 +
1691679103.8317137-UTR-H-elongata_contig11241:823..9131691679103.8317137-UTR-H-elongata_contig11241:823..913Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11241 824..913 +
1622929645.7667196-UTR-H-elongata_contig11241:1270..13911622929645.7667196-UTR-H-elongata_contig11241:1270..1391Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11241 1271..1391 +
1691679103.840816-UTR-H-elongata_contig11241:1270..13911691679103.840816-UTR-H-elongata_contig11241:1270..1391Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11241 1271..1391 +
1622929645.78101-UTR-H-elongata_contig11241:2486..27111622929645.78101-UTR-H-elongata_contig11241:2486..2711Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11241 2487..2711 +
1691679103.8495219-UTR-H-elongata_contig11241:2486..27111691679103.8495219-UTR-H-elongata_contig11241:2486..2711Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11241 2487..2711 +
1622929646.005515-UTR-H-elongata_contig11241:6455..71691622929646.005515-UTR-H-elongata_contig11241:6455..7169Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11241 6456..7169 +
1691679103.9605296-UTR-H-elongata_contig11241:6455..71691691679103.9605296-UTR-H-elongata_contig11241:6455..7169Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11241 6456..7169 +
1622929646.0227373-UTR-H-elongata_contig11241:7213..75101622929646.0227373-UTR-H-elongata_contig11241:7213..7510Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11241 7214..7510 +
1691679103.9816504-UTR-H-elongata_contig11241:7213..75101691679103.9816504-UTR-H-elongata_contig11241:7213..7510Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11241 7214..7510 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929645.7939937-CDS-H-elongata_contig11241:2711..28641622929645.7939937-CDS-H-elongata_contig11241:2711..2864Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 2712..2864 +
1691679103.858491-CDS-H-elongata_contig11241:2711..28641691679103.858491-CDS-H-elongata_contig11241:2711..2864Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 2712..2864 +
1622929645.810654-CDS-H-elongata_contig11241:3485..36371622929645.810654-CDS-H-elongata_contig11241:3485..3637Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 3486..3637 +
1691679103.866708-CDS-H-elongata_contig11241:3485..36371691679103.866708-CDS-H-elongata_contig11241:3485..3637Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 3486..3637 +
1622929645.8732605-CDS-H-elongata_contig11241:3828..40781622929645.8732605-CDS-H-elongata_contig11241:3828..4078Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 3829..4078 +
1691679103.886615-CDS-H-elongata_contig11241:3828..40781691679103.886615-CDS-H-elongata_contig11241:3828..4078Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 3829..4078 +
1622929645.8855815-CDS-H-elongata_contig11241:4479..45491622929645.8855815-CDS-H-elongata_contig11241:4479..4549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 4480..4549 +
1691679103.897977-CDS-H-elongata_contig11241:4479..45491691679103.897977-CDS-H-elongata_contig11241:4479..4549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 4480..4549 +
1622929645.8994899-CDS-H-elongata_contig11241:4829..49381622929645.8994899-CDS-H-elongata_contig11241:4829..4938Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 4830..4938 +
1691679103.9064677-CDS-H-elongata_contig11241:4829..49381691679103.9064677-CDS-H-elongata_contig11241:4829..4938Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 4830..4938 +
1622929645.9167776-CDS-H-elongata_contig11241:5146..52401622929645.9167776-CDS-H-elongata_contig11241:5146..5240Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 5147..5240 +
1691679103.9175453-CDS-H-elongata_contig11241:5146..52401691679103.9175453-CDS-H-elongata_contig11241:5146..5240Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 5147..5240 +
1622929645.9363897-CDS-H-elongata_contig11241:5440..55361622929645.9363897-CDS-H-elongata_contig11241:5440..5536Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 5441..5536 +
1691679103.9285831-CDS-H-elongata_contig11241:5440..55361691679103.9285831-CDS-H-elongata_contig11241:5440..5536Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 5441..5536 +
1622929645.9631276-CDS-H-elongata_contig11241:5898..59671622929645.9631276-CDS-H-elongata_contig11241:5898..5967Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 5899..5967 +
1691679103.9374392-CDS-H-elongata_contig11241:5898..59671691679103.9374392-CDS-H-elongata_contig11241:5898..5967Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 5899..5967 +
1622929645.979232-CDS-H-elongata_contig11241:6362..64551622929645.979232-CDS-H-elongata_contig11241:6362..6455Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 6363..6455 +
1691679103.9475398-CDS-H-elongata_contig11241:6362..64551691679103.9475398-CDS-H-elongata_contig11241:6362..6455Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11241 6363..6455 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11241.1010.1prot_H-elongata_contig11241.1010.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11241 2712..6455 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11241.1010.1

>prot_H-elongata_contig11241.1010.1 ID=prot_H-elongata_contig11241.1010.1|Name=mRNA_H-elongata_contig11241.1010.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=362bp
MTLEATHALGEGVQIFDVSVLCTVFKDLEVLFNNRHPMDPRLVDALLWNT
KVTIWNVHSVTRALANGVVPTEAQAFARKTPSADGRIPPPTFLTVFGEHV
ETWERWLEQAYEGWEERPESKSRVETAPEQYHRGSNLGGLFRRPGVVYPI
HPTGHMRLPRPSSRRKFGSNAAEDGRRRVVRFVVQGKLESIRRDYRALFS
CLEDMCLSGREEFKIDAVGSSGSVQNELDSHPCTNARYKEGRDLRYPDFY
TVISAGHFVVTATAGHDYEFDRATSSVPTALLLERPLVMSSTLLAAYPCL
RNSRIHSMVANDNLCLNLQSAYDLTEAEYDEMELEARDCKLQMWRQTRET
VAEMVSGWVLD*
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mRNA from alignment at H-elongata_contig11241:237..7510+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11241.1010.1 ID=mRNA_H-elongata_contig11241.1010.1|Name=mRNA_H-elongata_contig11241.1010.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7274bp|location=Sequence derived from alignment at H-elongata_contig11241:237..7510+ (Himanthalia elongata Himel1 dioecious)
TTTCATAATAAATATGGCATTATAGTCCATTAGCGTACGCACAAGTTGCA
ACCTGCATGGCCCCTAGTAGAGCCCTCCTTAATTTAGATCTGGACTATGA
CTTGCATCGATCACCCATCACCGTGTGCGATTGTCCGTCCACTTGTTCAA
AAATGACTCGATTCATCGCGATTAGGCCGAATCGGGAATATGACTCCAGC
GAAGAGAATAGTCTTGCCCTGACGCCAGGGCCGACCTCGGAGAGCCTAAT
GCTAAGAAACCGATGGGATCTACAGGTGATGTAATATGGTGGTATCATTC
GGTCTGAACGACAGGGATGGCGTGTAGAAGTGGATCTGACCCTGTTTATG
ATGTGAAAGCCGCCTGCTTTGCCTATCCAAGGTGGCCGTAATTACTGAAC
GCTACGAACAGCATTTCACCATCGCTACTACGTAAGACGCGACGACCACG
CGCGAGGACTAAATCATACACTGACCACGTGTGCGGATTCGGTAGCTATA
CCATCAAACTCTACGAAGGCTCTAGACATTGCCTTATGCAGCCTCCTTAT
CCCCCCCCCAACAATTATTTATGTTTGTTCCATTCAGTTATGGGACTATG
CCGAAAGCTTGATTATGTCGCGAAGTACTACGTTAGAAAGCTACCTGTGC
AGCACACAAAAATCGACCACGAAGCAAGTGAGTTCAGCCCGCGCAGGATG
GGTACGGTTATAGCGCTGCTTGGGGGAGGGTGGCACGATGTTTTCACACT
TCCAGTGAATCGAGTGCTGAAAGTAAACAACATGATATTGACACTTGTGG
TCTGCTTAAAAGGAAGCTAGTTACTATGCAACCCTAACCCTAACCCTAAC
GGGACCGTGTGAAGAAACAGATACATAATTTGTCGAAATCTACGTGAGCC
TTGCCTGTCTTTTTGATATGCTAAGGGTACTTCATATGAACATTCTTCGC
TAACCCAGGAAGCGTTGTAACGCCGTACCATGATCGCTTTCGTCGCAATG
CAACACGCCTCATTGTCGAACGGCTCCGAGACAGCCGGGAGCAGGACGGC
GCGCGGCGGTGTATAACTCACCTGACTTCCATGCAACTTCGCTGGCCATG
TTTTCATGTGTGCTAGTGTCTTTGGGCTTCCACGTCACCGCCATCGTACA
GGAAAGTAATATCCTAGCCCTAACCCTAATCCTAACACCTCTATGATAGA
GGAAAGTAATATCCTAACCCTAAACCCTAATACAGCCATCGTGCAGGAAA
GTAATATCTTAACCCTGACTGAAACCCTAACATCGTACAGGAAAGTAATA
TCCTAGCCCTAATCTAAGCCCTAACACGGGCATCGTACAGGAAAATAGTA
CCTTAACCCCAACTCAAATCCTAACATCTTACTGGAAAGTAATACCCTAA
CACCGATATTATACAAGAAAGTAATACCCTAGCCCTAACCCTAACATCGC
CATCGTACAGGAACGTCATGCCCTAACCCTAACACAGCCATCGTACAGGA
AAGTAATGCCCTAACCCTAACCCTAACACCATAATCGTACAGGAAAGTAA
TACTCTAACACCGTCATTGTGCAGGAAAGTAATACCGTAGCCCTAACCCT
AACTCTAACATCGTACAGGAAAGTAATATCCTAGCCCTAACCCTAATCCT
AACACCGCCATTGTACAGGAGAGTACTGTCCTAACCCTAAACCCTAACAC
TGCCATCGTGCAGGAAAGTAATGCCTTAACCCTAACTCAAACTCTAACAT
CGTACAGAAAAGTAATATCCTAGCCCTAGCCCCAATCCTAATACTGCCAT
CGTACAGGAAATTAATGTCCTAACCCTAACCCTGACATGACCATCGTGCA
GGAAAGTAATACCCTAACCCTAACTCAAACCTTAACATTTACAGGAAAGT
AATACCCTAGTCCTAACCCTAACCCTAACACCATCATCGTACAGGAAAGT
AAGTATACCCTAGTCCTAACGACTCACGTGTGTGCTATGTCGTCACCGTG
ACTTGTTGCAAATACAGCTCGTGTTTTCTAGCTGAATAACTTATACCATC
TTAGAATCGAAGCACCATAGGTTGGTGACCTTTCGAAGTGCAGTGGACGC
TCTCTGCACCATTGACTCCATACCTTTAGAGATTAATGTAAACATACTAA
GAGCTTTCAGGTCCGTCAAACCTCATACGCGTCATAATCTCATACACACT
TTTTTCATGCCGTCCGCCCGTACAAAAACGTGTACTGCTATGTGCAGAAG
CCTCAGATAGGCTTCGAGCAACTTCTTCCGTGTCCCCAGCAAATCGTATC
GCTGGAGCACGCCATTACCGTAGGAAACCCGTATCAAACGGTGAATTCGA
GTATCTCAGAATCGCTTGGGCTGCCGTCGTGGACACCAGAGCAACGTGAT
CAAGAGTCTGGCGAAACTAAACGTGAAGCTGAGGCAGCGATTAACGCAGA
GCCCGGGGGCCGTAAGAGAAGATTAATGACACTTGAAGCCACTCACGCAC
TAGGAGAGGGGGTTCAGATTTTCGATGTCTCCGTATTATGCACTGTCTTC
AAAGATCTCGAAGTCCTGTTCAACAATCGACATCCCATGGATCCAAGGCT
CGTCGACGCGCTACTTTGGAATACTAAGGTGAAGTGAAGACTTTGTGAGT
AGCGGTTCGCCACGCTTCAAGGTACGCTATAAAAAAGTGAGATAGGGACG
TTTTAATATTTTAACCAACCGTGTATAGTCCGAGGTAATAGAGACTAAAC
GAAGTACTATACAAGTGTTAAAATTAAAAATAACGGCAGATCGACGCCTA
TCGATATACGAGGCACATTGCATTGCATTGCATTGCATTACATTACATTA
CATTACATCGTATTACATTGCATTACAGTACCGTATATAATTTAGGGTTA
GTGTATCAGCATTACCTAGTAATAGCAAGAGTAAACTAGATCTAGAGCGG
AACAGCAGGAGTGGATTTTGTCCAGGCGGTGAAATATTGGAAAACCATAC
TGCAAGCTGCTGAGATGCAGCTGGGAGCCAGCGTTGGTTTTCCTCTGCCC
ATCTTTTAGCGGTTCTCAACGCGCCTCGATACCTACATATTTTTGTGGGC
CTTGAAAATACCAGCAAGGCAGAAGCCTGGTCACATAATTTTCTGGAAAA
TAGGCCGATACCCTCCTGTTCCTGTCAAATGATTCAATTAAATCTGTACA
TCATCGTTGAGTTAGAGCGCTATTTTCTCCCTGTTTACCCGATAACTAGG
TTACGATCTGGAACGTGCACAGCGTTACGAGAGCACTTGCCAACGGGGTT
GTGCCGACCGAGGCGCAAGCTTTTGCCAGAAAAACACCTTCTGCCGATGG
GAGAATACCCCCTCCGACGTTTCTAACGGTCTTTGGGGAGCACGTGGAAA
CGTGAGCGAGAGTGATTGCCGTTGTCGGGGGCTGATTGCTGTTGTCGGCG
ACTGACGACTGATTCCAGAAATCTTCCTTCAATTTCCTCTTCCTGTGTAG
CTCCAGAGAAGTTCGTGTTCCACCAAGTAATGTGAAATAATTTGTATTTT
AGAAGGTTTCGCATCGCGTCGCATCGAAATTAACCCTACCAGGTGGGAAA
GATGGCTGGAGCAGGCCTACGAAGGATGGGAAGAGCGTCCCGAAAGCAAA
AGTCGAGTGGAAACAGCCCCTGAGCAATACCACCGGGGATCAAACCTCGG
GGGATTGTTCCGTAGACCTGGGGTGGTGTACCCAATTCATCCAACGGGAC
ATATGAGACTCCCCCGACCCAGTAGCAGACGGAAATTTGGTTCCAACGCC
GCTGAGGATGGCCGAAGACGTGTTGTCAGATTCGTTGTGCAGGTTAGTAA
CTAAACACCTGAAGAGGTATCGAGGTATCGATATATCTTGTATCGGCTAG
AGCTATTTGTCCGTACGAAGTGATGCACTGTTTCTCATTCGTTTGTTATT
GGAGTGCGACTTTACTCGTTTCTGACGAACCGCATTCCGGCTGCCAGCAA
AGCAAAGCTCGAGGCCGAACTTACGTGTCCTTCATCATTGTTTGTCAATT
TGGTATACGGTGGAGCAGTAGCACGGTGGAGCAGTAGCTCCGAAGGCAAT
GTTTAGCCACGAATGGAGCTTAACTTTAGAGTCAGTTCTAAAAGCGGAGC
GAATGAGCTTGGCTTAGCTCTATGTTTGACGTAATTATGTCACTATTTAC
AACGGAAACAGTGTTTTGTACTACTCTAACCGTTCTCATGCAGGGAAAGC
TGGAGAGTATTCGGCGCGATTACCGAGCATTGTTCTCTTGCCTCGAAGAT
ATGTGCCTTTCTGGTAAGGTCACTCCAGCAGGGTACCTAGATAAGGCTAT
AATGCTGATGCTTACGGTATGTAGTGCCCCCTGATAAGCGTAGCATCCAA
AATATTTGACATACAAAACTATAACTACGCTTGTCCAGTGCGATTAATGC
ATTTTTTTTGTAAACAAGATATGAATTAATTTAAACCCTCCGAACACTCA
CACTTTCTTAGCACCGTACTGCACTTAACTGGTTTCCCGTGTAACAAAGT
ATTTACATACGTTCGAACGACGGTTTCACGTTATCCGCAACAGGAAGAGA
AGAGTTTAAGATTGACGCTGTTGGTTCTTCAGGAAGTGTGCAAAACGAGC
TTGACAGCCACCCTTGTACCAATGCCCGTTACAAGGAAGGTCGAGACTTG
CGGTAAGTCGAGAAGCCAGCCAGCAAAAGCAGGACGTCAGCTGTGTGCAG
TTTCCCTCTTGGTCTTATAGAGCCACGTGTGCTGCGGCTTCGGCGGGGAG
GGTTTATGTTGTGAGGATCGGGTGTGGCCCTCTCCCCCTCGAACACCAAC
CAATGCCCTCTCCCCCTCGTTACTATTCTTGTTGGGCTGTGCGTCGTCCG
TTGCTGGAAGATATCCGGACTTCTACACAGTAATAAGCGCCGGACACTTC
GTTGTGACAGCAACCGCTGGACACGACTACGAGTTTGATCGAGCAACGTC
ATCGGTGAGTTGAATGTCCAAAATTAGTCCAGAGCCTTGATCCAAAGCCT
TGAAACACGCCGAAGCGAGAGGTAGACAAAACCTACAGCACGTTAGGAGT
TAGGCGAAATACCCTTGCCGTATATAGAGTAAGATTTATTTCATGCACCT
TCATGACAGCGTGGTACATCTATCTTTTCGTATGCCCGTATTACGGTTTA
TCAGGTACCCACCGCTCTGCTCCTGGAAAGACCGCTGGTGATGTCATCCA
CTCTTCTCGCTGCTTACCCCTGCTTACGAAATTCGCGCATTCATAGCATG
GTGAGTTTGCCGTTTCGATGGGTAGTTTTTGCGAATGACGTGAGACCTTC
GCTATCGTGGGGAAGTTCTAATTCTCGCTTTTTCTATCTCTTTTTTAATG
TGTACGAAGCGATATCCACGTCATAGGTCTGGTACATTAGGGTTAGGGTA
ACCGCGCTATTAGGGTAACCACGCTCAAGGTACAGTATGTTGATGAGGAA
CACCGCTGGACTCTAGATTCATCTTTATCGTCCGGTGATTGATTTTGTAT
ACACGCATATGCTGCCACCAGATCTAGTGCAAAAAACGATTGTAACGCAC
CTACTTTGAATTGAACGAAATACGTTAAATACATATATATTGGGTTCGCC
GTCCTTCGGCAGGTGGCCAACGATAATTTGTGCCTCAACTTGCAGTCAGC
ATATGATCTCACGGAGGCTGAATATGATGAGGTGAGGCCGTCCGTTAGGT
TCTGTCGTGTACCTTTACACTTAATCCTACGGGAGGCATATGTGTCGCCA
TCTCCTATCCACCGAAGACTCACCGAAAGCGTACCCTAGCGCAGATATGT
CGCCATCTTTATCTTTATCACTATGCTCCACAACAGTACAGTACAGTACA
GTACAGTACAGTACGTATTACTATAGCTCTAACGTTTTCTTTGTACTAAA
TAGCAACAAGCTCCCCAGCAGAGCTCCATACACTTCATTCTTCCTTGCAT
GCCAAAACGATATCTGCATTGTTGGGTTGATTGCGAGAATCCTAATCCGG
AGGATGTCCCTTTAGCTTGGGAGAGCGCACTCTTAAGTGTTTATTTTTCA
CTACCCGTCCACGACAATCGATGCAGATGGAGCTGGAAGCTCGCGACTGC
AAGCTTCAGATGTGGAGGCAAACACGGGAAACCGTGGCTGAAATGGTTTC
AGGTTGGGTGCTTGACTGAGATTTCGGGGCTTAGCTCGACCTACGCTAAA
AACTCGACGGCGCCAGGCTGCAAAAGCCCATCGACGTGAACCCTAGCTTC
AGCCTGTGAAGGATACTCTTCTTGTATAGCGAAGCACCGTGGACGTCTTC
AACTTCTGAAGTATTGTACCGACACCATCGAACTATCGATCCTGAAGGGA
AATAATTATCCCTTGCCATGTCCGTGACGTGTGTTATATTATATCCCACG
TTTTTGATTTACAGCTGCTTAAACTATTAATATTACTACGAATAACACAT
GATGCCATTATCGCGCGGTCGAGAAAGAATTGCCGCTCTTGGGTTCTGGG
CTACTTCTCTCTATGCTCTTGACTATCGCGCTGCGCTCGAATTGTGGTCA
AAGTGTTAGAGGGGTCAAAGTCTTAGGAATGTACCGTTGCTATTTCACAG
ATAGCTAGCTGCTGTGATGGGCCGCGGATCCCGCGGATTATCACCGCGAT
TGGCCTTACGAAAGGGGTAGATTGTTTTCAGACTTGTGGAGTGCTGACAG
TAGAAAAAGCATCACGCAAGCATAGAAAGCAGCTTGGAAAAATGAACTTG
GTCTCCCAATGTAGATCTAGATCCTATATTATAGTATATTATAGAGTGGA
TTGATAACCTTAACCTTAATGGGGATAAGCACACATCTTTACATCTGTAC
AGAGAAGCCGAGGCTGAGTGAGCGATGCTCCAAACTTTTTCTGGAATAGC
GCACAGGGCTGAGTGAGTGACTGAGAGAGCATTAGGCCTAACGTTATATA
TCGTATACGGAGTCTTCTGGATTGAGCGCTCGAATATTGAAATCATACGG
ATTAAATAAACATTAATAGGGCAAGTACGTCCCGGCGGCAGCAGACGTTT
TGCACCAGAAGAGAGTGTAGCCTATTGTTACCAGGACGGGGATATGATTA
TATGATCCCATCGGCGCATCATCGGTACTAATAATAAACTCTAATTTTAG
TATTTATTAACGCTAATACTAATATTAATACGGTATCATCCCGCCTGTCG
TCTTAAGTGATCAGTGATCATTCC
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Coding sequence (CDS) from alignment at H-elongata_contig11241:237..7510+

>mRNA_H-elongata_contig11241.1010.1 ID=mRNA_H-elongata_contig11241.1010.1|Name=mRNA_H-elongata_contig11241.1010.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2172bp|location=Sequence derived from alignment at H-elongata_contig11241:237..7510+ (Himanthalia elongata Himel1 dioecious)
ATGACACTTGAAGCCACTCACGCACTAGGAGAGGGGGTTCAGATTTTCGA
TGTCTCCGTATTATGCACTGTCTTCAAAGATCTCGAAGTCCTGTTCAACA
ATCGACATCCCATGGATCCAAGGCTCGTCGACGCGCTACTTTGGAATACT
AAGATGACACTTGAAGCCACTCACGCACTAGGAGAGGGGGTTCAGATTTT
CGATGTCTCCGTATTATGCACTGTCTTCAAAGATCTCGAAGTCCTGTTCA
ACAATCGACATCCCATGGATCCAAGGCTCGTCGACGCGCTACTTTGGAAT
ACTAAGGTTACGATCTGGAACGTGCACAGCGTTACGAGAGCACTTGCCAA
CGGGGTTGTGCCGACCGAGGCGCAAGCTTTTGCCAGAAAAACACCTTCTG
CCGATGGGAGAATACCCCCTCCGACGTTTCTAACGGTCTTTGGGGAGCAC
GTGGAAACGTTACGATCTGGAACGTGCACAGCGTTACGAGAGCACTTGCC
AACGGGGTTGTGCCGACCGAGGCGCAAGCTTTTGCCAGAAAAACACCTTC
TGCCGATGGGAGAATACCCCCTCCGACGTTTCTAACGGTCTTTGGGGAGC
ACGTGGAAACGTGGGAAAGATGGCTGGAGCAGGCCTACGAAGGATGGGAA
GAGCGTCCCGAAAGCAAAAGTCGAGTGGAAACAGCCCCTGAGCAATACCA
CCGGGGATCAAACCTCGGGGGATTGTTCCGTAGACCTGGGGTGGTGTACC
CAATTCATCCAACGGGACATATGAGACTCCCCCGACCCAGTAGCAGACGG
AAATTTGGTTCCAACGCCGCTGAGGATGGCCGAAGACGTGTTGTCAGATT
CGTTGTGCAGGTGGGAAAGATGGCTGGAGCAGGCCTACGAAGGATGGGAA
GAGCGTCCCGAAAGCAAAAGTCGAGTGGAAACAGCCCCTGAGCAATACCA
CCGGGGATCAAACCTCGGGGGATTGTTCCGTAGACCTGGGGTGGTGTACC
CAATTCATCCAACGGGACATATGAGACTCCCCCGACCCAGTAGCAGACGG
AAATTTGGTTCCAACGCCGCTGAGGATGGCCGAAGACGTGTTGTCAGATT
CGTTGTGCAGGGAAAGCTGGAGAGTATTCGGCGCGATTACCGAGCATTGT
TCTCTTGCCTCGAAGATATGTGCCTTTCTGGGAAAGCTGGAGAGTATTCG
GCGCGATTACCGAGCATTGTTCTCTTGCCTCGAAGATATGTGCCTTTCTG
GAAGAGAAGAGTTTAAGATTGACGCTGTTGGTTCTTCAGGAAGTGTGCAA
AACGAGCTTGACAGCCACCCTTGTACCAATGCCCGTTACAAGGAAGGTCG
AGACTTGCGGAAGAGAAGAGTTTAAGATTGACGCTGTTGGTTCTTCAGGA
AGTGTGCAAAACGAGCTTGACAGCCACCCTTGTACCAATGCCCGTTACAA
GGAAGGTCGAGACTTGCGATATCCGGACTTCTACACAGTAATAAGCGCCG
GACACTTCGTTGTGACAGCAACCGCTGGACACGACTACGAGTTTGATCGA
GCAACGTCATCGATATCCGGACTTCTACACAGTAATAAGCGCCGGACACT
TCGTTGTGACAGCAACCGCTGGACACGACTACGAGTTTGATCGAGCAACG
TCATCGGTACCCACCGCTCTGCTCCTGGAAAGACCGCTGGTGATGTCATC
CACTCTTCTCGCTGCTTACCCCTGCTTACGAAATTCGCGCATTCATAGCA
TGGTACCCACCGCTCTGCTCCTGGAAAGACCGCTGGTGATGTCATCCACT
CTTCTCGCTGCTTACCCCTGCTTACGAAATTCGCGCATTCATAGCATGGT
GGCCAACGATAATTTGTGCCTCAACTTGCAGTCAGCATATGATCTCACGG
AGGCTGAATATGATGAGGTGGCCAACGATAATTTGTGCCTCAACTTGCAG
TCAGCATATGATCTCACGGAGGCTGAATATGATGAGATGGAGCTGGAAGC
TCGCGACTGCAAGCTTCAGATGTGGAGGCAAACACGGGAAACCGTGGCTG
AAATGGTTTCAGGTTGGGTGCTTGACTGAATGGAGCTGGAAGCTCGCGAC
TGCAAGCTTCAGATGTGGAGGCAAACACGGGAAACCGTGGCTGAAATGGT
TTCAGGTTGGGTGCTTGACTGA
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