mRNA_H-elongata_contig11240.1008.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11240.1008.1 vs. uniprot
Match: D8LAV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV0_ECTSI) HSP 1 Score: 272 bits (696), Expect = 7.200e-89 Identity = 126/173 (72.83%), Postives = 145/173 (83.82%), Query Frame = 1
Query: 1 QNVDLNQYWYSRETIKAIAAEVGEFGSDGTAFLSTPSIFFSLEKDLRAKCKLFDLDAKWGKDPGFVRYNFAEPECIPEDARGAFDMVVVDPPFITREVWEKYATAVQLLLRPGGARRILCSTITENALLMNELLGVTPCEFKPSIPNLVYQYELFSSYHSERLSVSNPEIPSE 519
+N DLNQYWYS+ TI AI AEVGEFGS GTAFLSTPSI+FSL++DLRAKCK+FDLD KW KDPGFV Y++ +P+ IPE RG FDMVVVDPPF+TR+VWE Y A +LLLRPGGAR +LCSTI ENA M ELLG +PCEFKPSIPNLVYQY L+ +Y S+RL+ NPEIPSE
Sbjct: 17 ENGDLNQYWYSKATIDAIVAEVGEFGSGGTAFLSTPSIYFSLDRDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQVWESYTAATKLLLRPGGARLVLCSTILENAPFMEELLGASPCEFKPSIPNLVYQYSLYVNYDSKRLASCNPEIPSE 189
BLAST of mRNA_H-elongata_contig11240.1008.1 vs. uniprot
Match: A0A835YKM7_9STRA (Putative N6-adenine methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKM7_9STRA) HSP 1 Score: 215 bits (547), Expect = 2.520e-66 Identity = 104/172 (60.47%), Postives = 130/172 (75.58%), Query Frame = 1
Query: 10 DLNQYWYSRETIKAIAAEVGEFGSDGTAFLSTPSIFFSLEKDLRAKCKLFDLDAKWGKDPGFVRYNFAEPECIPEDARGAFDMVVVDPPFITREVWEKYA--TAVQLLLRPGGARRILCSTITENALLMNELLGVTPCEFKPSIPNLVYQYELFSSYHSERLSVSNPEIPSE 519
DLNQYWYS+ TI+A+ EV EFG +GTAFLSTPSI+FS ++R KCK+FD+D W KDPGFV ++F + + +P D G F MVV+DPPFI REVWE YA TA +LLL+PGG +IL +TI EN LM ELL V PC FKPSIP+LVYQY+L+++Y S L+ NPEIP +
Sbjct: 16 DLNQYWYSKGTIEALVLEVVEFGGEGTAFLSTPSIYFSTPAEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLLQPGG--KILATTIAENEELMAELLDVKPCVFKPSIPHLVYQYKLYTNYDSPNLNQRNPEIPED 185
BLAST of mRNA_H-elongata_contig11240.1008.1 vs. uniprot
Match: A0A7S1G4D1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4D1_9STRA) HSP 1 Score: 206 bits (525), Expect = 8.850e-63 Identity = 110/185 (59.46%), Postives = 128/185 (69.19%), Query Frame = 1
Query: 10 DLNQYWYSRETIKAIAAEVGEFGSDGTAFLSTPSIFFSLEKDLRAKCKLFDLDAKWGKDPGFVRYNFAEPECIPEDARGAFDMVVVDPPFITREVWEKYATAVQLLLRP---------GGAR--------RILCSTITENALLMNELLGVTPCEFKPSIPNLVYQYELFSSYHSERLSVSNPEIP 513
DLNQYWYS ++I A+AAEV G F+STPSI+FSL K+ R +FDLD +W KDPGFVRY+F EPE PE+ R AFDM+VVDPPFITREVWEKYAT ++LL + GG R L STI ENA +M ELLGV P FKPSIPNLVYQY L+++Y SE LSV NPEIP
Sbjct: 21 DLNQYWYSAKSIAAMAAEVVATGGKA-CFISTPSIYFSLTKEQREGNYVFDLDTQWEKDPGFVRYDFNEPENFPEELRHAFDMIVVDPPFITREVWEKYATTMRLLAKERSGEVDTGAGGEEEKKDEPPCRFLVSTIAENAEMMEELLGVKPQAFKPSIPNLVYQYNLYANYESEGLSVPNPEIP 204
BLAST of mRNA_H-elongata_contig11240.1008.1 vs. uniprot
Match: A0A7S0SHX0_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SHX0_9CHLO) HSP 1 Score: 208 bits (529), Expect = 3.180e-62 Identity = 104/176 (59.09%), Postives = 126/176 (71.59%), Query Frame = 1
Query: 10 DLNQYWYSRETIKAIAAEVGEF-GSDGT--AFLSTPSIFFSLEKDLRAKCKLFDLDAKWGKDPGFVRYNFAEPECIPEDA--RGAFDMVVVDPPFITREVWEKYATAVQLLLRPGGARRILCSTITENALLMNELLGVTPCEFKPSIPNLVYQYELFSSYHSERLSVSNPEIPSED 522
DLNQYWYS TI +A +V E ++GT AFLSTPS++FSL K++RA+ FDLD +W K+PG+V YNF P P A RG FDMV++DPPFITREVWEKYA + LLRPGG ++ STI ENA M ELLGV P F+PSIP LVYQY L++SY S+ L V NPEIP +D
Sbjct: 116 DLNQYWYSNRTITHMALDVEEVCAAEGTRAAFLSTPSVYFSLSKEVRARSWCFDLDTQWHKEPGYVCYNFQTPVDFPGAAELRGTFDMVIIDPPFITREVWEKYAETARFLLRPGGGGHVMASTIQENAPFMRELLGVEPQVFQPSIPTLVYQYALYASYESKNLGVKNPEIPDDD 291
BLAST of mRNA_H-elongata_contig11240.1008.1 vs. uniprot
Match: C1MQ67_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MQ67_MICPC) HSP 1 Score: 199 bits (505), Expect = 9.140e-60 Identity = 101/176 (57.39%), Postives = 127/176 (72.16%), Query Frame = 1
Query: 10 DLNQYWYSRETIKAIAAEVGEFGS--DGTA-FLSTPSIFFSLEKDLRAKCKLFDLDAKWGKDPGFVRYNFAEPECIP--EDARGAFDMVVVDPPFITREVWEKYATAVQLLLRPGGARRILCSTITENALLMNELLGVTPCEFKPSIPNLVYQYELFSSYHSERLSVSNPEIPSED 522
DLNQYWYS TI A+A++V + S D A FLSTPS++FSL KD RA+ FDLD +W ++PGFV+Y+F +P +D +G FDMV++DPPFITREVWEKY T + LL+PGG ++L STI ENA + ELLGVTP F PSIP LVYQY L++SY S+ L+ NPEIP D
Sbjct: 32 DLNQYWYSNRTIAAMASDVEDQCSSPDSKACFLSTPSVYFSLNKDTRARSWCFDLDTQWAREPGFVKYDFNDPIGFDGFDDLKGTFDMVIIDPPFITREVWEKYTTTAKALLKPGG--KVLASTIQENAPFVKELLGVTPQVFMPSIPTLVYQYHLYASYESKFLAEKNPEIPEYD 205
BLAST of mRNA_H-elongata_contig11240.1008.1 vs. uniprot
Match: A0A8J8NP72_HALGN (Uncharacterized protein n=2 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NP72_HALGN) HSP 1 Score: 196 bits (497), Expect = 7.750e-59 Identity = 101/172 (58.72%), Postives = 124/172 (72.09%), Query Frame = 1
Query: 10 DLNQYWYSRETIKAIAAEVGEFGSDGTAFLSTPSIFFSLE-KDLRAKCKLFDLDAKWGKDPGFVRYNFAEPECIPEDARGAFDMVVVDPPFITREVWEKYATAVQLLLRPGGARRILCSTITENALLMNELLGVTPCEFKPSIPNLVYQYELFSSYHSERLSVSNPEIPSED 522
D NQYWYS+ TI +A+E +FG AFLSTPSI+FSL+ K+++A ++FD D K+ KDPGFV Y+F +PE IP D FDMVV+DPPFITREVWEKYATA +L+L G + IL STI EN ++ELLG F+PSIPNLVYQY L+S+Y SE L NPEIP D
Sbjct: 16 DFNQYWYSKATINFMASECEQFGQK-IAFLSTPSIYFSLKNKEIKAASRVFDFDTKFNKDPGFVFYDFNKPEDIPADLHNYFDMVVIDPPFITREVWEKYATAAKLILIKEGGK-ILLSTIDENEGFIDELLGAKRRAFRPSIPNLVYQYSLYSNYESEGLLAKNPEIPDFD 185
BLAST of mRNA_H-elongata_contig11240.1008.1 vs. uniprot
Match: J9IRF9_9SPIT (N6-adenineMlase domain containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IRF9_9SPIT) HSP 1 Score: 194 bits (493), Expect = 3.010e-58 Identity = 99/175 (56.57%), Postives = 124/175 (70.86%), Query Frame = 1
Query: 1 QNVDLNQYWYSRETIKAIAAEVGEFGSDGTAFLSTPSIFFSLE-KDLRAKCKLFDLDAKWGKDPGFVRYNFAEPECIPEDARGAFDMVVVDPPFITREVWEKYATAVQLLLRPGGARRILCSTITENALLMNELLGVTPCEFKPSIPNLVYQYELFSSYHSERLSVSNPEIPSED 522
+N DLNQYWYS+ TI +A+E +FG AFLSTPS++FSL+ K+++A K FD D K+GKDP F+ Y+F +PE IP + FDMVV+DPPFITREVWEKY A + LL G +IL STI EN + ELLG +F+PSIPNLVYQY L+S+Y SE L+ NPEIP D
Sbjct: 13 ENADLNQYWYSKPTINFLASECEQFGKK-IAFLSTPSVYFSLKNKEIKANSKCFDYDEKFGKDPNFIFYDFNKPEDIPRELEKQFDMVVIDPPFITREVWEKYTEASKFLLADDG--KILLSTIDENEAFILELLGAKRRQFRPSIPNLVYQYSLYSNYDSEGLNNKNPEIPEFD 184
BLAST of mRNA_H-elongata_contig11240.1008.1 vs. uniprot
Match: A0A7S0RNF7_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RNF7_9CHLO) HSP 1 Score: 192 bits (489), Expect = 1.460e-57 Identity = 96/176 (54.55%), Postives = 121/176 (68.75%), Query Frame = 1
Query: 10 DLNQYWYSRETIKAIAAEVGEFGSDGTAFLSTPSIFFSLEK--DLRAKCKLFDLDAKWGK-DPGFVRYNFAEPECIPEDARGAFDMVVVDPPFITREVWEKYATAVQLLLRPGGARRILCSTITENALLMNELLGVTPCEFKPSIPNLVYQYELFSSYHS--ERLSVSNPEIPSED 522
+ NQYWYS TI+A+ E+ G+ AFLSTPS+FFSL K DLRA +FD D +W + +P F +Y+F P+ +P + RGAFD VV+DPPFIT EVWE YA A ++LL PGG ++L ST+ ENA LM LLG PC FKPSIP+LVYQY F+SY E L NPE+P +D
Sbjct: 17 EFNQYWYSSYTIEALVKELCGCGATKAAFLSTPSVFFSLPKGSDLRAASWVFDYDEQWARSEPHFCKYDFKAPDALPAELRGAFDAVVIDPPFITHEVWELYAQAAKMLLAPGG--KVLASTVAENAPLMESLLGAKPCAFKPSIPHLVYQYNFFTSYEPTPEGLGAKNPEVPEDD 190
BLAST of mRNA_H-elongata_contig11240.1008.1 vs. uniprot
Match: A0A7S1RVF2_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RVF2_ALECA) HSP 1 Score: 194 bits (493), Expect = 4.980e-57 Identity = 91/171 (53.22%), Postives = 122/171 (71.35%), Query Frame = 1
Query: 10 DLNQYWYSRETIKAIAAEVGEFGSDGTAFLSTPSIFFSLEKDLRAKCKLFDLDAKWGKDPGFVRYNFAEPECIPEDARGAFDMVVVDPPFITREVWEKYATAVQLLLRPGGARRILCSTITENALLMNELLGVTPCEFKPSIPNLVYQYELFSSYHSERLSVSNPEIPSED 522
DLNQYW+SR+TI A AE+ + G + A +S+PS++FSL +R CK+ D D +W DPG+V Y+F +PE +P G+FD V+VDPPFITREVW KYA V+LLLR GG ILC+TI E+ +M ELL + P F+PSIP+LVYQY ++++Y S RL NPE+ +ED
Sbjct: 31 DLNQYWFSRDTISAFVAEIVDAGGNA-ALVSSPSVYFSLPDSIRVTCKVLDYDQQWASDPGYVFYDFNDPEALPVQCHGSFDFVLVDPPFITREVWAKYAMTVKLLLRDGG--HILCTTIAESVDMMRELLDLHPVLFRPSIPSLVYQYSIYTNYASARLGRLNPEVDAED 198
BLAST of mRNA_H-elongata_contig11240.1008.1 vs. uniprot
Match: A0A7S1IZX2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IZX2_9EUGL) HSP 1 Score: 191 bits (485), Expect = 9.080e-57 Identity = 96/174 (55.17%), Postives = 118/174 (67.82%), Query Frame = 1
Query: 1 QNVDLNQYWYSRETIKAIAAEVGEFGSDGTAFLSTPSIFFSLEKD-LRAKCKLFDLDAKWGKDPGFVRYNFAEPECIPEDARGAFDMVVVDPPFITREVWEKYATAVQLLLRPGGARRILCSTITENALLMNELLGVTPCEFKPSIPNLVYQYELFSSYHSERLSVSNPEIPSE 519
+ + NQYWYS TI+ I AEV G+ AF+STPS++FSL+ L+ K+ D D KW KD GFV YNF EP +P D FD +VVDPPFIT EVW +YAT V+ LL+PGG +LCSTI ENA +M E+LG+ P FKPSIPNLVYQY L+S+Y L NPEIP +
Sbjct: 33 EKAEHNQYWYSDSTIRNIIAEVEASGATKAAFVSTPSLYFSLQSAALKQTSKVLDFDKKWEKDLGFVFYNFEEPTNLPADLEHQFDYIVVDPPFITAEVWAQYATTVKFLLKPGGM--VLCSTIAENASMMKEILGLEPIAFKPSIPNLVYQYLLYSNYPVTVLGSPNPEIPED 204 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11240.1008.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11240.1008.1 >prot_H-elongata_contig11240.1008.1 ID=prot_H-elongata_contig11240.1008.1|Name=mRNA_H-elongata_contig11240.1008.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp MVVVDPPFITREVWEKYATAVQLLLRPGGARRILCSTITENALLMNELLGback to top mRNA from alignment at H-elongata_contig11240:2441..4822+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11240.1008.1 ID=mRNA_H-elongata_contig11240.1008.1|Name=mRNA_H-elongata_contig11240.1008.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2382bp|location=Sequence derived from alignment at H-elongata_contig11240:2441..4822+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11240:2441..4822+ >mRNA_H-elongata_contig11240.1008.1 ID=mRNA_H-elongata_contig11240.1008.1|Name=mRNA_H-elongata_contig11240.1008.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=546bp|location=Sequence derived from alignment at H-elongata_contig11240:2441..4822+ (Himanthalia elongata Himel1 dioecious)back to top |