mRNA_H-elongata_contig11223.994.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11223.994.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE) HSP 1 Score: 545 bits (1404), Expect = 2.190e-181 Identity = 294/481 (61.12%), Postives = 354/481 (73.60%), Query Frame = 3
Query: 192 GSTASRAACKNLQAREVIDAVKTIVEHLNKSGVMKVKLEDIQNLMFGKAAKLVNAVPHRWISTCNVLEEILRNWPVLEEHCMKNEHGAAFPLATYKTEIEELYSLMKPIAVLIRESNQTGVPTGLNTFLALVMLRCSTLDANKPLTITVPRKGLSGETATP--TTTIDRPAKNLKPVTVKTREMLLVAVNKRFFDKRYNEDVVSDPPPGYLFEMAACMSPCFVQLMWLSAVCSSNKEAQRVGKLIKDKVIDLMVRLAEGAGVQPSKGQGDEGVGSDVGNGGSTATRSKQKRGPFGTATPPKKTSELTARLLASGIFGGSSSGKVDQKKRPFDVTIRDICQQEFDRFQKHFGGTCVDDHPIGDLLDFWAKQGQALYPNMARAARVLLSLPASSAVLERDFSTAGRLLTGARSRLDAAYAEMVLFLNGNQEYIPQEVPALSDTQVLEAVPNRLSDPRPELEAISSAENEQDNGFDEYAFEMLD 1628
G+ ASRAACKNL AR+VID VK +VEHLNKS +MK + +DIQ L++GK+ KLVNAVPHRWISTCNVLEEILR+W LEEH KNE G +FPLA +KT IEELYSLMKPI+V+++ES + G+PTGL+TF ALVMLR TLD KPL +TVPRK + + A TTTI+RPA +L+ VT TR ML A++KRFF KRY+ +VV+ PP Y+FEMAACMSP L WL+++CSS++EA RV KLIK KV+DLMV+LAEGAG P K + G+ S K+ RGP T SE T RLL SG+FGGS S + P ++T++++CQQEFDRF F T + D+PI LL+FWA +GQALYPNMARAARVLLS+PASSAVLERDFSTAGRL+TGARSRL AAY EMVLFLNGNQEYIP EVP LS +Q EAVP RLS+P E E +S E D DE+A E L+
Sbjct: 360 GTNASRAACKNLGARQVIDTVKKVVEHLNKSTLMKARYDDIQVLLYGKSMKLVNAVPHRWISTCNVLEEILRSWQALEEHYQKNEQGGSFPLAQHKTVIEELYSLMKPISVIMKESQEKGLPTGLSTFAALVMLRADTLDVTKPLEVTVPRKVTTTDWARTLATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDANVVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKLAEGAGAYPGKATEGDTSGASA----SAPPPFKRSRGPLTVGT-----SERTKRLLKSGVFGGSKSS-TSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGQALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLSKSQGQEAVPRRLSNPNEETERLSVGEVVPDTNTDEFAEESLE 830
BLAST of mRNA_H-elongata_contig11223.994.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 206 bits (524), Expect = 4.810e-54 Identity = 157/464 (33.84%), Postives = 230/464 (49.57%), Query Frame = 3
Query: 222 NLQAREVIDAVKTIVEHLNKSGVMKVKL----EDIQNLMFGKAAKLVNAVPHRWISTCNVLEEILRNWPVLEEHCMKNEHGAAFPLATYKTEIEELYSLMKPIAVLIRESNQTGVPTGLNTFLALVMLRCSTLDANKPLTITVPRKGLSGETAT-----PTTTIDRPAKNLKPVTVKTREMLLVAVNKRFFDKRYNEDVVSDPPPGYLFEMAACMSPCFVQLMWLSAVCSSNKEAQRVGKLIKDKVIDLMVRLAEGAGVQPSKG-QGDEGVGSDVGNGGSTATRSKQKRGPFGTATPP-----KKTSELTARLLASGIFGGSSSGKVDQKKRPFDVTIRDICQQEFDRFQKHFGGTCVDDHPIGDLLDFWAKQGQALYPNMARAARVLLSLPASSAVLERDFSTAGRLLTGARSRLDAAYAEMVLFLNGNQEYIPQEVPALSDTQVLEAVPNRLSDPRPELEAI 1568
N AR+V+ AVK +VEH+ +S K E +++ KLVN P RW VLE + N ++ + G+ PLA ++ EI+ELYSL+KP+A LI QT VPTG L L L+ ST + + L + P + T T++ R +L V RE L A+++R+FD+ Y + S+ ++F+M + P L ++ + S+ A V K I DK+I L V LAE + G + DE V A R++ P T KK TA+ + G+F G ++ F+ R E + + GT DD +L++W K G+ LYP +ARAARV+ PAS+AVLERDF+ A ++ +RS DA Y EMVLFL+GN + IP+++P L D V +P RLS+P PEL +
Sbjct: 199 NPAARKVVLAVKKVVEHIRRSKSPGAKAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVGIDG--VYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVRAQGWPEGTGGGERKATSVPRLHNHLTQVGRDAREHLASALDRRYFDRCY-KSADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEKEMERKQAGPEQDESV----------AKRARPAAAPGSLQTAVAKARNKKDDAATAKFASLGLFKKRRGGGEASQQPTFEPMAR----AELETLRGVEAGTLTDDLSCEGVLEWWKKWGR-LYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDVQAKIPGRLSNPIPELHGL 644
BLAST of mRNA_H-elongata_contig11223.994.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 185 bits (470), Expect = 3.380e-46 Identity = 155/472 (32.84%), Postives = 227/472 (48.09%), Query Frame = 3
Query: 231 AREVIDAVKTIVEHLNKSGVMKVKLEDIQNLMFGKAA--KLVNAVPHRWISTCNVLEEILRNWPVLEEHCMKNEHGAAFPLATYKTEIEELYSLMKPIAVLIRESNQTGVPTGLNTFLALVMLRCSTLDANKPLTITVPR--------KGLSGETATPTTTIDRPAKNLKPVTVKTREMLLVAVNKRFFDKRYNEDVVSDPPPGYLFEMAACMSPCFVQLMWLSAVCSSNKEAQRVGKLIKDKVIDLMVRLA----EGAGVQPSKGQGDEGVGSDVGNGGSTATRSKQKRGPFGT-----ATPPKKTSELTARLLASGIFG----GSSSGKVDQKKRPFDVTIRDICQQEFDRFQKHFGGTCVDDHPIGDLLDFWAKQGQALYPNMARAARVLLSLPASSAVLERDFSTAGRLLTGARSRLDAAYAEMVLFLNGNQEYIPQ---EVPALSDTQVLEAVPNRLSDPRPELEAI 1568
AR V+ AVK VE + KS K + Q + F + + K+VNA P RW LE + N + + E G PL+ + EI+ELYSL++P+A +I QT PTG L L L+ STL+A+ PL I P +G GE T R K+L V + RE L A++ R FDKRY V G +F+M + PC L ++S + + A V K I DK+I L +LA E G++ +G+ A R+ Q P T + K + TA + G+ G+S+ +++ + + T+R FG T + +L++W K+ + YP +AR ARV+ + PAS V ERD +AGR++T +RS DA Y EMVLFL+GN + +P+ E+PA V +P RLS+P EL A+
Sbjct: 312 ARNVVMAVKKAVERVRKSPASKDIFTEEQVIQFSQCSNRKVVNAAPQRWSGVTGALEATVTNRAAING--VYAEEGEDSPLSPHVHEIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGATEGAGGEQRTTA----RAHKDLTRVGREAREHLASALHWRDFDKRYKSTVAKST--GLVFDMQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKLADKKAERKGIEAEQGE-------------PAAKRAPQASAPGNTYPMFASARYHKEATTTAIMAGLGLIATRDEGTSASPIERARAELE-TLRSASDDAL------FGDTSCE-----GVLNWW-KRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLSNPMLELHAL 749
BLAST of mRNA_H-elongata_contig11223.994.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 182 bits (461), Expect = 3.490e-45 Identity = 150/472 (31.78%), Postives = 216/472 (45.76%), Query Frame = 3
Query: 192 GSTASRAACKNLQAREVIDAVKTIVEHLNKSGVMKVKLEDIQNLMFGKA--AKLVNAVPHRWISTCNVLEEILRNWPVLEEHCMKNEHGAAFPLATYKTEIEELYSLMKPIAVLIRESNQTGVPTGLNTFLALVMLRCSTLDANKPLTITVP-RKGLSGETA------TPTTTIDRPAKNLKPVTVKTREMLLVAVNKRFFDKRYNEDVVSDPPPGYLFEMAACMSPCFVQLMWLSAVCSSNKEAQRVGKLIKDKVIDLMVRLAEGAG-VQPSKGQGDEGVGSDVGNGGSTATRSKQKRGPFGTATPPKKTSELTARLLAS-GIFGGSSSGKVDQKKRP--FDVTIRDICQQEFDRFQKHFGGTCVDDHPIGDLLDFWAKQGQALYPNMARAARVLLSLPASSAVLERDFSTAGRLLTGARSRLDAAYAEMVLFLNGNQEYIPQEVPALSDTQVLEAVPNRLSDPRPELEAI 1568
G+ A N AR+VI VK +VEH+ KS K E+ Q + + KLVNA P RW NVLE ++ N ++ + G PL + EI+ELYS++KP A +I + QT VPTG LAL L+ TL+ + PL I P RK ET+ P T+ R V TR+ + +V+ +FDKRY D ++ C PC + +A+ + + G D+ R A G V P P K E T + AS G+FG G +Q + P F+ T R E + GG+ D+L +W A YP +AR ARV+ PAS+AVLERDFS AGR++T +RS +D+ Y EM++FL+GN + IP+++ L++ +P RL++P LE +
Sbjct: 278 GTHVDPAKSGNPGARKVITTVKKVVEHIRKSPRAKAIFEEEQVQQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAIDG--VYTAEGKDSPLTSLTEEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQAETSGIGGGERPATSTPREHSLSTGVAKGTRQHICESVDWWWFDKRYKSAESQDTD-----YVSTCRWPCTRPRLTCAALHTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPL------------------------------FKAPVNKREEATTNMYASLGLFG---PGGDEQNEEPPSFEQTAR----AELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHA-YPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAAARTKIPGRLANPVERLEQL 704
BLAST of mRNA_H-elongata_contig11223.994.1 vs. uniprot
Match: A0A6H5KX27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX27_9PHAE) HSP 1 Score: 137 bits (345), Expect = 5.080e-30 Identity = 129/473 (27.27%), Postives = 217/473 (45.88%), Query Frame = 3
Query: 192 GSTASRAACKNLQAREVIDAVKTIVEHLNKSGVMKVKLED-IQNLMFGK--AAKLVNAVPHRWISTCNVLEEILRNWPVLEEHCMKNEHGAAFPLATYKTEIEELYSLMKPIAVLIRESNQTGVPTGLNTFLALVMLRCSTLDANKPLTITVPRKGLSGETATPTTTIDRPAKNLKPVTVKTREMLLVAVNKRFFDKRYNEDVVSDPPPGYLFEMAACMSPCFVQLMWLSAVCSSNKEAQRVGKL--------IKDKVIDLMVRLAEGAGVQPSKGQGDEGVGSDVGNGGSTATRSKQKRGPFGTATPPKKTSELTARLLASGIFGGSSSGKVDQKKRPFDVTIRDICQQEFDRFQKHFGGTCVDDHPIG-DLLDFWAKQGQALYPNMARA-ARVLLSLPASSAVLERDFSTAGRLLTGARSRLDAAYAEMVLFLNGNQEYIPQEVPALS-DTQVLEAVPNRLSDPRPELEAI 1568
G + S A+ KN R++++ +K I++H N+S K+ L+D ++ L G AKL AV RW+ST ++ IL + +++ C E G FPLA YKTEIEE+YS+++ + + +T T V L STL+ +KPL + + + + P T DRP ++L TRE+ A+ KRF RY ++ +LF+ A ++P ++ ++ + S G IK+++ + ++ L E A V+ + T ++ GP P R + S G+ ++ ++ + ++E K + + G D D+W+ P RA A+ +L PAS+ +ERDFS A + R+ +D AY EM LFL ++IP +VP + + + A+PNRL D + LEA+
Sbjct: 322 GMSNSPASSKNHLCRDLLEKMKKIIQHFNRSSGDKILLDDELEELSEGNWNHAKLAQAVVQRWVSTAKMMFRILEQFTAIQK-CFV-EKGKVFPLANYKTEIEEVYSILRAVKTVTEYCQKTYEATMEGGLRQTVQLLISTLEPSKPLRVHHV-EAIGADAPDPPHT-DRPHEDLTETGRTTREVFATALAKRFLP-RYKSSELNRRT--HLFDHAPLLNPRTRKMRYIELLLKSTAATSYSGSCGTLATFTDIKERIQEEVLELLEQAVVEHRARE-------------PVPTSDEEVTGPRSRTVP------AATRAADDDVGFDDSEGEEEESSSLYERSP----EEEAKSILKEWLNLLIPSDKRGKDAADYWSTPHGKSQPLPLRAVAQGVLGCPASTGAMERDFSIADMFMPRKRASVDPAYFEMSLFLRAQYDFIPDDVPKFANEAEQTAAIPNRLRDEKL-LEAV 763
BLAST of mRNA_H-elongata_contig11223.994.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE) HSP 1 Score: 128 bits (321), Expect = 4.880e-28 Identity = 130/468 (27.78%), Postives = 193/468 (41.24%), Query Frame = 3
Query: 222 NLQAREVIDAVKTIVEHLNKS---GVMKV-KLEDIQNLMFGKAAKLVNAVPHRWISTCNVLEEILRNWPVLEEHCMKNEHGAAFPLATYKTEIEELYSLMKPIAVLIRESNQTGVPTGLNTFLALVMLRCSTLDANKPLTITVPRKGLSGETATPTTTIDRP--AKNLKPVTVKTREMLLVAVNKRFFDKRYNEDVVSDPPPGYLFEMAACMSPCFVQLMWLSAVCSSNKEAQRVGKLIKDKVIDLMVRLAEGAGVQPSKGQGDEGVGSDVGNGGSTATRSKQKRGPFGTATPPKKTSELTARLLASGIFGGSSSGKVDQKKRPFDVTIRDICQQEFDRFQKHFGGTCVDDHPIGDLLDFWAKQGQALYPNMARAARVLLSLPASSAVLERDFSTAGRLLTGARSRLDAAYAEMVLFLNGNQEYIPQEVPALSDTQVLEAVPNRLSDPRPELEAISSAENEQDNGFDE 1607
N AR+++ AVK +VEH+ KS G + + E +++ KLVN P RW VLE + N ++ + G+ PLA ++ +I+ELYS++KP+A LI QT VPTG L L L+ ST + + L + P + RP A ++P K R + S ++F+M + P L ++ + SS A V K I DK+I L V LA + G V A K P K TA+ + +F G + ++P T + EF+ + G+ DD +L +W K + YP +ARAARV PA+ DA Y EMVLFL+G + P+++P L D + +P RLS+P PEL + D DE
Sbjct: 25 NRAARKMVLAVKKVVEHIRKSKSPGAQAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVGGVLEATIVNRVDIDG--VYAREGSVNPLAPHEHDIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPARAQG-----------RPEGAGGVEP--------------KATSVPRCYKPADSAKTTDFVFDMQMGLHPTTADLQYVDKLASSKVHAAFVTKRITDKIITLAVELATKEMERKQAGPEQH---ESVAKQARPAAAPKSSH-PAVARARNKNEDAATAKFTSLRLFKKRRVG-ANASQQP---TFEPMACAEFETLRGVEAGSLTDDLGCEGVLKWWEKW-EGSYPLLARAARVDFGAPAAG---------------------DAKYVEMVLFLHGKLDLFPEQIPELRDEDIHAKIPGRLSNPVPELHGLDGTLGPVDLTHDE 435
BLAST of mRNA_H-elongata_contig11223.994.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 122 bits (307), Expect = 5.480e-26 Identity = 98/311 (31.51%), Postives = 149/311 (47.91%), Query Frame = 3
Query: 651 LSGETATPTTTIDRPAKNLKPVTVKTREMLLVAVNKRFFDKRYNEDVVSDPPPGYLFEMAACMSPCFVQLMWLSAVCSSNKEAQRVGKLIKDKVIDLMVRLAEGAGVQPSKGQGDEGVGSDVGNGGSTATRSKQKRGPFGTATPPKKTSELTARLLASGIFGGSSSGKVDQKKRP--FDVTIRDICQQEFDRFQKHFGGTCVDDHPIGDLLDFWAKQGQALYPNMARAARVLLSLPASSAVLERDFSTAGRLLTGARSRLDAAYAEMVLFLNGNQEYIPQEVPALSDTQVLEAVPNRLSDPRPELEAISSA 1577
+SGE P T+ R L V TR+ + +V+ R+FDKRY D Y+F+M + P L ++ + S++ A V I DKVI L V+LAE A + G+G +T P +A K ++ + A G K+ P F+ T R E + + GG+ D+L +W A YP +AR ARV++ AS+AVLE DFS AGR++T +RS +D+ Y EM+LFL+GN + IP+++ L++ +P RL++P LE + A
Sbjct: 212 VSGER--PATSTPREHSLLTGVARGTRQHMCESVDWRWFDKRYKSAKSQDT--DYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALH-------------TGDGSTT---------PAWSAAADKPAAKRARQAAAPG-----------SKEEPPSFEQTAR----AELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHA-YPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGA 480
BLAST of mRNA_H-elongata_contig11223.994.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.330e-25 Identity = 91/278 (32.73%), Postives = 133/278 (47.84%), Query Frame = 3
Query: 747 AVNKRFFDKRYNEDVVSDPPPGYLFEMAACMSPCFVQLMWLSAVCSSNKEAQRVGKLIKDKVIDLMVRLAEGAGVQPSKGQGDEGVGSDVGNGGSTATRSKQKRGPFGTATPPKKTSELTARLLAS-GIFGGSSSGKVDQKKRPFDVTIRDICQQEFDRFQKHFGGTCVDDHPIGDLLDFWAKQGQALYPNMARAARVLLSLPASSAVLERDFSTAGRLLTGARSRLDAAYAEMVLFLNGNQEYIPQEVPALSDTQVLEAVPNRLSDPRPELEAISSA 1577
+V+ R FDKRY D Y+F+M + P L ++ + S++ A V I DKVI L VRLAE A + GD G+ TP + E T + AS G+FG G+ +++ + F T R E + + GG D+L +W A YP +AR ARV+ PAS+AVLE FS AGR+ T +RS +D+ Y EM++FL+GN IP+++ L++ P RL++P LE + A
Sbjct: 4 SVDWRRFDKRYKSAESQDT--DYVFDMQMALHPTTAGLRYVEKLASTSAFAGAVKSTITDKVIFLTVRLAEAAALHT----GD------------------------GSTTPAGE--EATTNMHASLGLFGPGVDGQ-NEEPQSFKQTAR----AELTKLRAVQGGRLAARLRCEDVLKWWKMWAHA-YPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKLTEVVARTKFPGRLANPVDGLEPLDGA 243
BLAST of mRNA_H-elongata_contig11223.994.1 vs. uniprot
Match: D7G4Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z8_ECTSI) HSP 1 Score: 107 bits (267), Expect = 1.780e-20 Identity = 81/263 (30.80%), Postives = 130/263 (49.43%), Query Frame = 3
Query: 192 GSTASRAACKNLQAREVIDAVKTIVEHLNKSGVMKVKLEDIQNLMF---GKAAKLVNAVPHRWISTCNVLEEILRNWPVLEEHCMKNEHGAAFPLATYKTEIEELYSLMKPIAVLIRESNQTGVPTGLNTFLALVMLRCSTLDANKPLTITVPRKGLSGETATPTTTIDRPAKNLKPVTVKTREMLLVAVNKRFFDKRYNEDVVSDPPPGYLFEMAACMSPCFVQLMWLSAVCSSN-------KEAQRVGKLIKDKVIDLMVR 950
G T + KN R++++ +K IV H NKS K+ LE+I + M G AKL AV RWIS C +L +L W L++ + ++ FPL + K E+EE+Y+++ + ++ S T T LV+L STL+ +PLT+T R E P + P +L V + TRE AV KRF RY + + + F+MA + P + ++ + +S KE +V ++IK++ DL+ +
Sbjct: 254 GMTQVKEKSKNPLCRDLLELIKGIVGHFNKSAADKIALEEIIDEMSQGKGSTAKLSQAVAQRWISICKMLLRVLERWDALKKIYLDSDKE--FPLRSRKKEVEEVYTIINAVKAVVVYSQTTYESTAQGGLQRLVVLATSTLEPMRPLTVTPVRAIGQKEDEVPAASTG-PHTDLTKVAMATREAFAEAVAKRFVKGRYGSGLGTH---SHRFDMAMFLCPSARGMKYIDTLEASTVGPMGGFKEPDKVKQVIKNQARDLLAK 510
BLAST of mRNA_H-elongata_contig11223.994.1 vs. uniprot
Match: D7G3L2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L2_ECTSI) HSP 1 Score: 106 bits (264), Expect = 2.080e-20 Identity = 80/263 (30.42%), Postives = 130/263 (49.43%), Query Frame = 3
Query: 192 GSTASRAACKNLQAREVIDAVKTIVEHLNKSGVMKVKLEDIQNLMF---GKAAKLVNAVPHRWISTCNVLEEILRNWPVLEEHCMKNEHGAAFPLATYKTEIEELYSLMKPIAVLIRESNQTGVPTGLNTFLALVMLRCSTLDANKPLTITVPRKGLSGETATPTTTIDRPAKNLKPVTVKTREMLLVAVNKRFFDKRYNEDVVSDPPPGYLFEMAACMSPCFVQLMWLSAVCSSN-------KEAQRVGKLIKDKVIDLMVR 950
G T + KN R++++ +K IV H NKS K+ LE+I + M G AKL AV RWI C +L +L W L++ + ++ FPL + K E+EE+Y+++ + ++ S T T LV+L STL+ +PLT+T R E P + RP +L V + TRE AV KRF RY + + + F+MA + P + ++ + +S KE +V ++I+++ DL+ +
Sbjct: 254 GMTQVKEKSKNPLCRDLLELIKGIVGHFNKSAADKIALEEIIDEMSQGKGSTAKLSQAVAQRWIRICRMLLRVLERWDALKKFYLDSDKE--FPLRSRKKEVEEVYTIINGVKAVVVYSQITYESTAQGGLQRLVVLATSTLEPMRPLTVTPVRAIGQKEDEVPAAST-RPHTDLTKVAMATREAFAEAVAKRFVKGRYGSGLGTH---SHRFDMAMFLCPSARGMKYIDTLEASTVGQMGGFKEPDKVKQVIRNQARDLLAK 510 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11223.994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11223.994.1 >prot_H-elongata_contig11223.994.1 ID=prot_H-elongata_contig11223.994.1|Name=mRNA_H-elongata_contig11223.994.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=485bp MSFSCGSTASRAACKNLQAREVIDAVKTIVEHLNKSGVMKVKLEDIQNLMback to top mRNA from alignment at H-elongata_contig11223:2289..5933- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11223.994.1 ID=mRNA_H-elongata_contig11223.994.1|Name=mRNA_H-elongata_contig11223.994.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3645bp|location=Sequence derived from alignment at H-elongata_contig11223:2289..5933- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11223:2289..5933- >mRNA_H-elongata_contig11223.994.1 ID=mRNA_H-elongata_contig11223.994.1|Name=mRNA_H-elongata_contig11223.994.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2910bp|location=Sequence derived from alignment at H-elongata_contig11223:2289..5933- (Himanthalia elongata Himel1 dioecious)back to top |