mRNA_H-elongata_contig11182.961.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11182.961.1
Unique NamemRNA_H-elongata_contig11182.961.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: D8LT20_ECTSI (Predicted unusual protein kinase (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT20_ECTSI)

HSP 1 Score: 483 bits (1243), Expect = 2.880e-167
Identity = 262/326 (80.37%), Postives = 292/326 (89.57%), Query Frame = 1
Query:    1 QNKVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPPPXLXXXXXXXXXPLPIPDSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGVEILAEFAQALPGDSRKTDALLEVGSEVVQNLADKTSQRLNGLLSVMATSGGSRDTGK 978
            + +VEPVMKRVIGPYVFEGGGAKSLNYQSLARDL RATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISD+SPALQRALRDILY+EDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTL+F+L E+ARPLRAALVGEASNAADL+LRR TRQA+  A+DLLRPPPPX XXXXXXXXXP P+P+SVVDALSP+LT EED+FLASL+ELAYAL+G+E+GT+SDDPL  +RQLL+  + G  G   L EF + LPGDS KT+A+ +VGSEVVQNLAD+ S+R NGLLS  +     RD G+
Sbjct:   31 RGQVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLARATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDDPLATIRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLADRASERFNGLLSGGSGXXXXRDAGR 356          
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A6H5KBP7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP7_9PHAE)

HSP 1 Score: 482 bits (1240), Expect = 2.980e-159
Identity = 259/313 (82.75%), Postives = 288/313 (92.01%), Query Frame = 1
Query:    1 QNKVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPPPXLXXXXXXXXXPLPIPDSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGVEILAEFAQALPGDSRKTDALLEVGSEVVQNLADKTSQRLNGLLS 939
            + +VEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISD+SPALQRALRDILY+EDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTL+F+L E+ARPLRAALVGEASNAADL+LRR TRQA+  A+DLLRPPPPX XXXXXXXXXP P+P+SVVDALSP+LT EED+FLASL+ELAYAL+G+E+GT+SD+PL  +RQLL+  + G  G   L EF + LPGDS KT+A+ +VGSEVVQNLAD+ S+R NGLLS
Sbjct:  581 RGQVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDNPLATIRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLADRASKRFNGLLS 893          
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A835YL56_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL56_9STRA)

HSP 1 Score: 267 bits (682), Expect = 2.040e-75
Identity = 164/332 (49.40%), Postives = 212/332 (63.86%), Query Frame = 1
Query:    7 KVEPVMKRVIGPYVFEGGGAKSLNYQ--------------------------------SLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILY---TEDGK----FLAKRLSVLLSYATG---VVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPPPXLXXXXXXXXXPLPIPDSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTIS----DDPLGALRQLLRTDNAGVAGVEILAEFAQALPGDSRKTDA 864
            KVEP+M+RVI PYVF+GGGAK+LNYQ                                SLA DLGRATLEIPFNIP YFAL+ARALGILEG+ALTGDPDY+IV+EAYP+VTR+I +D+SP L+RAL+DILY   T DG         RL+ LL+YA G     A    VFVDFD++PST A L++ + F+LG+ AR LR ALVGE ++A DL+LR++TR+ ++    LL+PPP  L         PLP+P  ++DALSP+L+ EE+VF  SL +L  AL GV+  + +      P   LR+LL TDN+     + L EFA+ +  DS + DA
Sbjct:  435 KVEPIMRRVIAPYVFQGGGAKNLNYQVCTRAHHGSSAPKXXXXXXXXXXXXXXXXXXXSLAADLGRATLEIPFNIPSYFALVARALGILEGIALTGDPDYKIVLEAYPYVTRRITTDDSPLLRRALQDILYSGSTADGTAAPALSITRLANLLTYAMGNTDAAAGGGPVFVDFDSVPSTGAKLNEVMGFLLGDSARSLRKALVGEIASATDLVLRQTTRRGLSRLEALLQPPP--LPFLPRLPSLPLPVPKRLLDALSPQLSIEEEVFAKSLTDLGLALLGVDADSAAALDNGRPDVLLRKLLSTDNSSA---QELLEFARTVQADSPQFDA 761          
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A250XDH8_9CHLO (Protein kinase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XDH8_9CHLO)

HSP 1 Score: 197 bits (500), Expect = 7.370e-52
Identity = 115/274 (41.97%), Postives = 168/274 (61.31%), Query Frame = 1
Query:   10 VEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRP--------PPPXLXXXXXXXXXPLPIPDSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGV 807
            + PVM RV+GPY+  GGGAK+ N+ +L++DL   TLEIPF++PPY +L+AR++  LEG+AL GDPDY++V +AYPFV RKI+ ++S      LRDILY  +GK    R+S LL+ A G V++ S  FVDFD++P   A++ + L+F+L  +A+ LR  LV +  +  DL+LR   R+        L P        P P L          +P+P+++ D L+P L PEE VFL SL EL+ +L+G+      D     + QLLR  ++ +A V
Sbjct:  466 ITPVMDRVLGPYL-RGGGAKAFNFSALSQDLLSVTLEIPFSVPPYMSLLARSVATLEGIALAGDPDYQMVTQAYPFVVRKILRNDSTGTGGLLRDILYDNEGKVKPTRMSALLNAALGYVSSKSEGFVDFDSIPDEGATVQEVLQFLLSPEAKDLRPLLVSQLVSGLDLLLRDRVRKLYNVTLPALVPRLPFFGAIPTPPLPPLLVPGLGFMPVPEAL-DLLAPPLAPEEGVFLNSLTELSASLTGLSLSDFEDPEPQRVIQLLRELSSALAAV 737          
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A2V0PLP2_9CHLO (Protein kinase domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PLP2_9CHLO)

HSP 1 Score: 195 bits (496), Expect = 3.390e-51
Identity = 129/317 (40.69%), Postives = 177/317 (55.84%), Query Frame = 1
Query:   16 PVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPPPXLXXXXXXXXXPLPIP---------------DSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGVEILAEFAQALPGDSRKTDALLEVGSEVVQNLADKTSQR 921
            PVM+RV+GPY+  GGGA+S N+Q+L++DL   TLEIPF++PPY +L+ARA+  LEG+AL GDP Y++V +AYPFV R+++ ++S      LR++L+   G+    RLS LL  A G VA  S  FVD D+LP   A+ S+ L FVL  +AR LR  LV   +  ADL++R   R+A+A+A  L  P  P L         PLP+P               D+ VD  +P L  +E V+LASL EL   + G+    I    LG L  L    N G    E LA    A+ GD   T A   V ++V   +A   + R
Sbjct:  451 PVMERVLGPYL-RGGGARSFNFQALSQDLLSVTLEIPFSVPPYMSLLARAVATLEGIALLGDPQYQMVAQAYPFVARRVLRNDSSGAGALLREMLFDSQGQLRPARLSALLQAALGYVADKSEGFVDLDSLPEEGATTSEVLRFVLSPEARDLRPLLVSWLATGADLLIRDRARKALAAAPSLA-PRLPLLG--------PLPLPXXXXXXXXGLGLVPLDAAVDLFAPPLDAQEGVYLASLLELLAGVLGIPAAQIDSPDLGRLLGLFT--NPGAQARE-LAGALSAVAGDPGSTAAAAGVAADVADAVAATLAAR 754          
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A836B1N9_9CHLO (Protein kinase domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A836B1N9_9CHLO)

HSP 1 Score: 191 bits (486), Expect = 8.030e-50
Identity = 128/333 (38.44%), Postives = 180/333 (54.05%), Query Frame = 1
Query:   16 PVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDG---------------KFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQA--------------IASARDLLRPPPPXLXXXXXXXXXPLPIPDSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGV-EILAEFAQALPGDSRKTDALLEVGSEVVQNLADKTSQRL 924
            PVM RV+ PY+  GGGA + N+Q+L++DL  ATLEIPF++PPY +L+AR++  LEG+AL GDP Y +V +AYPFV RK++ ++S +    LRD+L   D                +  A+RL+ LL+ A G VA  +  FVDFD LP   AS+ +   F+L  +AR LR  LVG  S+  DL+LR   R+A              I S    L PPPP +          LP+    V+ L+P L P E V+L  L ELA ++ GVE   + D  L +L QL  + +  V  +  +L   A A  G  +      EV  EVV  LA++ + R+
Sbjct:  466 PVMDRVLSPYL-RGGGAAAFNFQALSQDLLAATLEIPFSVPPYMSLLARSVATLEGIALAGDPQYAMVAQAYPFVARKVLRNDSSSASALLRDLLLIRDAAGAGGADGGEAGSRQQLAARRLAALLNAALGYVADSAGGFVDFDALPEEGASVQEIASFLLSPEARELRPLLVGWVSDGLDLLLRDRLRKAYNLASASLTPRLPFIGSLPAALMPPPPPVWVPGKGL---LPV-GQAVELLAPPLEPSEQVYLQQLTELAASVLGVEPSALEDPSLNSLLQLASSPSDQVRELANVLGNVAGA--GSGKNLMTATEVAVEVVDKLAEQQAGRV 791          
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A7S3VU42_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VU42_DUNTE)

HSP 1 Score: 190 bits (482), Expect = 1.930e-49
Identity = 128/315 (40.63%), Postives = 184/315 (58.41%), Query Frame = 1
Query:    7 KVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVA--ADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPP-PXLXXXXXXXXXPLPIP-------DSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGVEILAEFAQALPGDSRKTDALLEVGSEVVQNLADKTSQR 921
            ++ PVM RV+ PY+  GGGA + N+ +L++DL   TLEIPF++PPY +LIAR++  LEG+AL+GDP Y++V +AYPFV RK++ ++S +    L+DIL+  DGK    RL  LL+   G VA    SA F+D D +P   AS+S+ + F+L  +AR LR  LV E SN  DL LR   R+A A    LL PP  P LXXXXXXXXXP+ +P       D  V+ L+P L   E V+L SL EL   L GV    +      +++ +L+        V+ + +    + G+    + +  +  +VV  LA K  +R
Sbjct:  469 RIIPVMDRVLSPYL-RGGGAAAYNFSALSQDLLSVTLEIPFSVPPYMSLIARSVVTLEGIALSGDPQYQMVAQAYPFVVRKVLRNDSNSSMALLQDILFDNDGKVKPTRLGALLNAGLGYVADAKQSAGFIDIDAVPDDGASVSEVVAFLLSPEARELRPLLVREISNGLDLFLRDRFRKAYALLPGLLAPPRLPFLXXXXXXXXXPVFLPGIGLIAADEAVEKLAPPLNSAEQVYLVSLMELTANLLGVSVAELESPTASSIQGMLQMATNPSEQVQEIGDALNTMSGNRANLEVVQAIVLDVVNTLASKQEER 782          
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A383VLQ5_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VLQ5_TETOB)

HSP 1 Score: 189 bits (480), Expect = 6.490e-49
Identity = 119/309 (38.51%), Postives = 170/309 (55.02%), Query Frame = 1
Query:   16 PVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPPPXLXXXXXXXXXP-------------LPIPDSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGVEILAEFAQALPGDSRKTDALLEVGSEVVQNLA 903
            PVM+RV+GPY+  GGGAK+ N+Q+L++DL   T+EIPF++PPY +L+AR++  LEG+ALT DP Y++V +AYPFV RK++ D+       LRD++Y E GK    RLS LL  A G V+     FVDFD +P+  AS  + L FVL  +AR LR  LVG  + AADL++R   R+A A+   LL P  P          X              LP+P++V + L+P L+ +E ++  SL EL   +  V    +       L +L+     G    E+      A  GD+    A  +V   VV  +A
Sbjct:  512 PVMERVLGPYL-RGGGAKAFNFQALSQDLLTTTMEIPFSVPPYMSLLARSVATLEGIALTADPGYQMVAQAYPFVARKVLRDDGSGTAALLRDLVYDEQGKLRPGRLSALLQAALGYVSEQGEGFVDFDAVPAEGASAGEVLAFVLSPEARELRPLLVGWLAGAADLVIRDRARKAAAALPGLLTPRLPFAALLGLPSLXXXXXXXVFLPGLGLLPLPEAV-ERLAPPLSDQEVIYYQSLLELVAGILDVPPAQLESPGFDTLARLIT--QPGEQAKELQQALVAATNGDAGTAAAAADVAVAVVDEVA 816          
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A7S0G2P8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2P8_9RHOD)

HSP 1 Score: 177 bits (450), Expect = 1.060e-48
Identity = 92/178 (51.69%), Postives = 129/178 (72.47%), Query Frame = 1
Query:    7 KVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIIS-DESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTR 537
            KVE VM +V+GP+V++GGGAK+++++SLARDL   T EIPF+IPPY+AL+ RA+  LEG+AL  +PDYR+VMEAYP+V R+++S D++P LQRAL +ILY +DG F   RL+ LL+ A G V       VDFD++P   A+ S+ LEFVL   ++ +R  L  E + A D++LRR  R
Sbjct:   65 KVEIVMGKVLGPFVYQGGGAKNVDFRSLARDLAGVTREIPFSIPPYYALVGRAIISLEGIALQANPDYRLVMEAYPYVARRVMSEDDTPELQRALAEILY-KDGGFSVNRLAALLNSAMGYVGMSKDAIVDFDSIPEDGATASKFLEFVLSSQSKSIRGTLSVELAKAIDIVLRRMVR 241          
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A812UJN5_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812UJN5_9DINO)

HSP 1 Score: 186 bits (472), Expect = 4.020e-48
Identity = 111/254 (43.70%), Postives = 163/254 (64.17%), Query Frame = 1
Query:   10 VEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKII--SDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVA-ADSAV-FVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPPPXLXXXXXXXXXPLPI----------PDSVVDALSPRLTPEEDVFLASLKELAYALSGVE 729
            + PVM+RV+ PY+ +GGGAK++N+ +L +DL +ATLEIPF+IPP+ +L+AR++  LEG+AL G+P+YRIV EAYPFV R+++  SD S  L  ALR++L   DG+  A RLS LL  A G VA AD+A  F+DF+ +P   A+  + ++F+L    R L+  LV E S   DL++R STR+A    +  L+P  P           PLP+          PDS++DAL P+L+ +E+++L S   +  AL GV+
Sbjct:  489 IVPVMQRVLKPYL-KGGGAKAMNFSALGQDLLQATLEIPFSIPPWVSLLARSIATLEGIALAGNPNYRIVAEAYPFVVRQLLEGSDGSSRLTLALRELLLDADGRVQAVRLSALLQAALGAVASADNADGFIDFEAVPEHGANPQEVVDFLLSPSGRSLKPLLVQELSTTVDLVVRTSTRRAYLDLQAALKPRVPVFGALPTPPPPPLPVITPKGPKMVSPDSLLDALQPKLSQDEELYLQSSASVFLALLGVD 741          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT20_ECTSI2.880e-16780.37Predicted unusual protein kinase (ISS) n=1 Tax=Ect... [more]
A0A6H5KBP7_9PHAE2.980e-15982.75Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835YL56_9STRA2.040e-7549.40Calcium-activated chloride channel-domain-containi... [more]
A0A250XDH8_9CHLO7.370e-5241.97Protein kinase domain-containing protein n=1 Tax=C... [more]
A0A2V0PLP2_9CHLO3.390e-5140.69Protein kinase domain-containing protein n=1 Tax=R... [more]
A0A836B1N9_9CHLO8.030e-5038.44Protein kinase domain-containing protein n=2 Tax=C... [more]
A0A7S3VU42_DUNTE1.930e-4940.63Hypothetical protein (Fragment) n=1 Tax=Dunaliella... [more]
A0A383VLQ5_TETOB6.490e-4938.51Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A7S0G2P8_9RHOD1.060e-4851.69Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A812UJN5_9DINO4.020e-4843.70Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11182contigH-elongata_contig11182:4127..8108 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score480.7
Seed ortholog evalue5.5e-133
Seed eggNOG ortholog2880.D8LT20
KEGG koko:K08869
EggNOG free text desc.regulation of tocopherol cyclase activity
EggNOG OGsCOG0661@1,KOG1235@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPredicted unusual protein kinase (ISS)
Ec32 orthologEc-08_003840.1
Exons7
Model size1335
Cds size1014
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929641.0650275-UTR-H-elongata_contig11182:4126..44261622929641.0650275-UTR-H-elongata_contig11182:4126..4426Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11182 4127..4426 -
1691679102.1762872-UTR-H-elongata_contig11182:4126..44261691679102.1762872-UTR-H-elongata_contig11182:4126..4426Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11182 4127..4426 -
1622929641.2206538-UTR-H-elongata_contig11182:8087..81081622929641.2206538-UTR-H-elongata_contig11182:8087..8108Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11182 8088..8108 -
1691679102.255314-UTR-H-elongata_contig11182:8087..81081691679102.255314-UTR-H-elongata_contig11182:8087..8108Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11182 8088..8108 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929641.0891712-CDS-H-elongata_contig11182:4426..45881622929641.0891712-CDS-H-elongata_contig11182:4426..4588Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 4427..4588 -
1691679102.1863391-CDS-H-elongata_contig11182:4426..45881691679102.1863391-CDS-H-elongata_contig11182:4426..4588Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 4427..4588 -
1622929641.1082306-CDS-H-elongata_contig11182:4796..48561622929641.1082306-CDS-H-elongata_contig11182:4796..4856Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 4797..4856 -
1691679102.194569-CDS-H-elongata_contig11182:4796..48561691679102.194569-CDS-H-elongata_contig11182:4796..4856Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 4797..4856 -
1622929641.1215498-CDS-H-elongata_contig11182:5188..53261622929641.1215498-CDS-H-elongata_contig11182:5188..5326Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 5189..5326 -
1691679102.2036297-CDS-H-elongata_contig11182:5188..53261691679102.2036297-CDS-H-elongata_contig11182:5188..5326Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 5189..5326 -
1622929641.1344306-CDS-H-elongata_contig11182:6026..62061622929641.1344306-CDS-H-elongata_contig11182:6026..6206Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 6027..6206 -
1691679102.215085-CDS-H-elongata_contig11182:6026..62061691679102.215085-CDS-H-elongata_contig11182:6026..6206Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 6027..6206 -
1622929641.1528296-CDS-H-elongata_contig11182:6472..66621622929641.1528296-CDS-H-elongata_contig11182:6472..6662Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 6473..6662 -
1691679102.2252936-CDS-H-elongata_contig11182:6472..66621691679102.2252936-CDS-H-elongata_contig11182:6472..6662Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 6473..6662 -
1622929641.1719925-CDS-H-elongata_contig11182:7508..76321622929641.1719925-CDS-H-elongata_contig11182:7508..7632Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 7509..7632 -
1691679102.238198-CDS-H-elongata_contig11182:7508..76321691679102.238198-CDS-H-elongata_contig11182:7508..7632Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 7509..7632 -
1622929641.193895-CDS-H-elongata_contig11182:7927..80871622929641.193895-CDS-H-elongata_contig11182:7927..8087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 7928..8087 -
1691679102.2464023-CDS-H-elongata_contig11182:7927..80871691679102.2464023-CDS-H-elongata_contig11182:7927..8087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11182 7928..8087 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11182.961.1prot_H-elongata_contig11182.961.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11182 4427..8087 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11182.961.1

>prot_H-elongata_contig11182.961.1 ID=prot_H-elongata_contig11182.961.1|Name=mRNA_H-elongata_contig11182.961.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=338bp
MKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALG
ILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDGKF
LAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARP
LRAALVGEASNAADLILRRSTRQAIASARDLLRPPPPPLPFLPRLPSLPL
PIPDSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQ
LLRTDNAGVAGVEILAEFAQALPGDSRKTDALLEVGSEVVQNLADKTSQR
LNGLLSVMATSGGSRDTGKQETTPRAKEKMAGPPSPP*
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mRNA from alignment at H-elongata_contig11182:4127..8108-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11182.961.1 ID=mRNA_H-elongata_contig11182.961.1|Name=mRNA_H-elongata_contig11182.961.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3982bp|location=Sequence derived from alignment at H-elongata_contig11182:4127..8108- (Himanthalia elongata Himel1 dioecious)
CAAAATAAGGTGGAACCCGTAATGAAGCGCGTGATCGGGCCCTACGTGTT TGAAGGAGGGGGTGCGAAGAGCCTCAACTACCAAAGCCTCGCCAGGGATC TGGGCAGAGCGACGCTGGAAATCCCTTTCAACATTCCCCCCTACTTTGCG CTGATTGCGCGCGCGCTCGGGATACTGGAAGGTACGCGTGCGCTTTTTTT TTTCTTTTTTTTTCTTGATGGTTTACCGGTTGTCTTACGCCGCTTGGCTT TCCTTTGAAACTCATTTATGTTTTGTTTGTTTGTTTGTGAGTTCGTCCTT CCCGCCATGTTTCAGACGGGTCAGCCGAGTTGGTGTCCATCCGCCCATAG AGAAAATGTCAGGGACTCCATTCCATTAACTTCGAAGCCCGACCAATTCT GGGCGCTTCAATACGGATCTGAGCTTGAGACGAGCTCCGCCAAATGACGT TCAAAACATTTCAAAAATTAAACTAGGCGTGGCGCTCACGGGGGATCCGG ACTACCGCATCGTGATGGAGGCTTACCCCTTCGTCACCCGCAAGATAATC TCCGACGAGTCTCCCGCCCTGCAGAGGGCGCTAAGAGACATCCTCTACAC GTGAGCTCAAGGTCGAATCAGTTGCAATTTGGTCGGCCGGTGGGGCGGCG GCACGTCTCGTTCGTCACGCGTACATACCTCACTTCAAGCCCGCGTAAGG CTCCCTCTAGTAGTATCATGCAGTTAAGTCAGGAATCGCTGGTTGAACTT GTTGTGTTCTGGTACGCGGGGATCGCGACAAAATTTTCCCTCCTTCCTCC TTCCTCCCCCCCCCAACCCCCCCGTCTCTCGCTCTCTCTCTCTCTCCGTG CCCCCAAGCTTGGTTTTGTCTTGGTTTTGTCTGGCGAATAGCGAATTGTT TAACATTTGTAATGTGCTCGCATCGAAGCCATGACATACCTTGACAACTC GCACACTCACGGGGTCGACATCTATCGACGCGGAATCACGACGCGGGTAG TAGTGTACATATTCGAACCCGATTTAGCCTAACTGGACATGATATAAACT AGAGAATGCTTCCTGACCCCGTTACTAAATACACTTTAATATCCATATCT AAATCTATATCTATATCTATATCCATATCTATATCTAAATCTATATCCAT ATCTATATCTATATCTATATCTATATCTAAATCTATATCCATATCTATAT CTATATCTATATCTAAATATATATCCATGTCTATATCTAAATGTATATTC ATATATATATATTATTAACTTATATCAACATCTATATCTAAATCTATATC TATATCCATATATATATCTATATCCATATCTATATCTATATCTAAATATA TATCCATATCTATATGTTGTTAATCTATATCAATATATAAACCTCTCTCT GTATATCTATATATTATTATCTATATATTGTACGCGCGTACGGTAGCGAG GACGGAAAATTCTTGGCGAAGCGGCTGTCTGTGCTACTGAGCTACGCCAC GGGTGTGGTCGCCGCCGACTCGGCCGTTTTCGTAGACTTCGACACCCTCC CCTCTACCGCGGCTTCGCTCAGCCAGACCCTCGAGTTCGTGCTGGGGGAG GATGCGCGGCCGCTCAGGGCTGCTCTCGTGGGCGAGGTACGAAAGGCCTC TAAAAATTTCCACCTTGCGTAAGGATCTCACCGTGCGCGCCCGTTACATG CGTATGTACGATACATCTCCCCCTACCACCCCCTTACCCTTTGCCACCGA GATTCAATTTTGATCGGCCCATTCGTCAGCATTTACTCCATCGTTAGGTC ATGTCGTAATCGAACCTCTCCTTTCCCCCTTCCCCTAACTCCCTCTCCCC CCTCCCGCCACCTCCTCTCGGGGAAAACGGATTCCCGACACCCTTGGGAC AGGCGTCCAACGCAGCCGACCTGATTCTCAGGAGGTCCACGAGGCAGGCC ATCGCGAGTGCAAGGGATCTCCTCCGCCCGCCCCCACCGCCGCTTCCCTT TCTACCGCGGCTGCCCTCCCTTCCGCTGCCGATCCCAGACAGCGTGGTCG ACGCCCTCAGTCCACGCCTGACGCCCGAAGAGGTCAGTGGGATGCGTTGG CCCTGCGCGTAATGAACGTTAATGGGTCAAAATTTGCTTCGTGTCAGTGG AGAGAGTGTGATGCACCGCCTCGCAAACGGTGGTACCGCGAGGTGTGATA TGATTGGTTGCGAGGACACCGAGCACCGGGAGGCCCCCGGGAGCATTCAT GTCAAGATATTTACATTTACGCGGCATCAGATGCCGGCTGGTGCACAACG CAATAATGCGCCGGATGCACCACGAGCAGCACAGTGTCATCCCTTGTCGA GGAAAGCGGTGTAGAAGGGTCGGGAAATGGTCACAACCCTCTTGTGGAGA GGTTATGATCGCTCCTCCTGTAATAGTTAGTCGTGGTCTGGACTGCAACG TGTAGCGAGAGAAGCCATCGCCGGAGTCCAGACGCGTGGCAAGCTTGTCG TCGTCTGAAAATAGAAAGGGCAGCCTTGAGCCTCGAGAAAGCAATCACGT TTGCAAAACCGAAATAGATGGACTGCTGTAGGCTCTGAACAACCTCAACG CGGGCTCATTCACAAATTATCCCGAGATATTTTACTCCTTTAGTTGGAAG TAATTTTGTCGGCGACGGGTCGCCCCGCTCACAGCTAGACTATTAACAAC CTTGCTCTTTGCTATGCTTGGTGTGAAAATCGAGCATTACTGTTGTTACA ATTACAAATAAATGTGGATTTATTACGCCCAGGACGTCTTCTTGGCTAGT CTCAAGGAACTGGCGTACGCCTTGTCGGGCGTTGAGGAGGGGACGATCAG CGACGACCCCCTGGGGGCCTTGCGGCAACTGCTGCGAACGGACAACGCGG GCGTCGCAGGTGTTGAAATAGTTTTGGAAAACGTCGAGGGGTTAAATTTC TTTGGTGAAAGTGCGTTTTTGGGACGCCGTCCCGTTTCGCTGTTGAGATG GCGGATATCCCCCCTCCTTTAACCTCCCAAATTTAATCGCCGCACATACC CCAGGTTTCCAAGCGGTATTTTTGCCGCCATAATTTATTTTAAGTTTCGG TTTCCAGTGGCGATAAACTTCATTGCCTCCTTTTGCGTCATGTTCCCTTG GAGGACGGCGTTTTGGGAGGCAGCGGTACCTTTTCATCATCCGCGACGAT CTTTCTGATATATGATGCACCCTTCCCCGTTACCCCGCTCGCGCCGTCAG AGCTGGCGGAGTTTGCGCAGGCGCTGCCAGGGGACTCTCGGAAGACGGAT GCCTTGCTAGAGGTAAGCAGGGGTACACGCGAAGAGATGTATGGCTTCTT GTGTCTCGCGCGGCGCGCACCAGAATCCGCGCTGGTGCTTGTGACTGAGT TTGAACCCTCGACCCTTTTTGTCGGTAGCATGCATCTCGCCCGTGTGAAG ACTCATCCCTCGCCCCGTTTTTTTTTTTTTCTGACGTATCCCTGGTCCTA TTGTCCCTTTTCATCAACAGGTTGGCTCAGAGGTTGTGCAGAACCTCGCC GATAAGACAAGCCAAAGGCTGAACGGGCTCTTGTCAGTGATGGCAACATC CGGCGGTTCTAGGGACACAGGGAAGCAGGAGACGACCCCCCGTGCGAAGG AGAAGATGGCCGGGCCGCCCAGCCCGCCATAGCTCCTTCATGTAAAGCTT GGGGCGCAAGCTCACCTCGTATATCTTCTCTACAAGAAAGTAACTTTTAT TTTGGGTTTTTGTTGTATCAGCCGTCACCGAGACGGTTTAGTATATTATA ATAAATAAATTGATAAAATTATATTATCCCGCCGCTTTTGAGCTATAAGT CCATCAGGGGCTTGTGTTTTTGCCCTGAATGTTCGCCTTCATGGTACGGA ACTGGAGGCAAACTACACGGGTAACCTCTTAGATAATATCACTTCGTGTT TATGCATTTGCATGGCTTGATGAAAACGGGTA
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Coding sequence (CDS) from alignment at H-elongata_contig11182:4127..8108-

>mRNA_H-elongata_contig11182.961.1 ID=mRNA_H-elongata_contig11182.961.1|Name=mRNA_H-elongata_contig11182.961.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2028bp|location=Sequence derived from alignment at H-elongata_contig11182:4127..8108- (Himanthalia elongata Himel1 dioecious)
ATGAAGCGCGTGATCGGGCCCTACGTGTTTGAAGGAGGGGGTGCGAAGAG
CCTCAACTACCAAAGCCTCGCCAGGGATCTGGGCAGAGCGACGCTGGAAA
TCCCTTTCAACATTCCCCCCTACTTTGCGCTGATTGCGCGCGCGCTCGGG
ATACTGGAAGATGAAGCGCGTGATCGGGCCCTACGTGTTTGAAGGAGGGG
GTGCGAAGAGCCTCAACTACCAAAGCCTCGCCAGGGATCTGGGCAGAGCG
ACGCTGGAAATCCCTTTCAACATTCCCCCCTACTTTGCGCTGATTGCGCG
CGCGCTCGGGATACTGGAAGGCGTGGCGCTCACGGGGGATCCGGACTACC
GCATCGTGATGGAGGCTTACCCCTTCGTCACCCGCAAGATAATCTCCGAC
GAGTCTCCCGCCCTGCAGAGGGCGCTAAGAGACATCCTCTACACGCGTGG
CGCTCACGGGGGATCCGGACTACCGCATCGTGATGGAGGCTTACCCCTTC
GTCACCCGCAAGATAATCTCCGACGAGTCTCCCGCCCTGCAGAGGGCGCT
AAGAGACATCCTCTACACCGAGGACGGAAAATTCTTGGCGAAGCGGCTGT
CTGTGCTACTGAGCTACGCCACGGGTGTGGTCGCCGCCGACTCGGCCGTT
TTCGTAGACTTCGACACCCTCCCCTCTACCGCGGCTTCGCTCAGCCAGAC
CCTCGAGTTCGTGCTGGGGGAGGATGCGCGGCCGCTCAGGGCTGCTCTCG
TGGGCGAGCGAGGACGGAAAATTCTTGGCGAAGCGGCTGTCTGTGCTACT
GAGCTACGCCACGGGTGTGGTCGCCGCCGACTCGGCCGTTTTCGTAGACT
TCGACACCCTCCCCTCTACCGCGGCTTCGCTCAGCCAGACCCTCGAGTTC
GTGCTGGGGGAGGATGCGCGGCCGCTCAGGGCTGCTCTCGTGGGCGAGGC
GTCCAACGCAGCCGACCTGATTCTCAGGAGGTCCACGAGGCAGGCCATCG
CGAGTGCAAGGGATCTCCTCCGCCCGCCCCCACCGCCGCTTCCCTTTCTA
CCGCGGCTGCCCTCCCTTCCGCTGCCGATCCCAGACAGCGTGGTCGACGC
CCTCAGTCCACGCCTGACGCCCGAAGAGGCGTCCAACGCAGCCGACCTGA
TTCTCAGGAGGTCCACGAGGCAGGCCATCGCGAGTGCAAGGGATCTCCTC
CGCCCGCCCCCACCGCCGCTTCCCTTTCTACCGCGGCTGCCCTCCCTTCC
GCTGCCGATCCCAGACAGCGTGGTCGACGCCCTCAGTCCACGCCTGACGC
CCGAAGAGGACGTCTTCTTGGCTAGTCTCAAGGAACTGGCGTACGCCTTG
TCGGGCGTTGAGGAGGGGACGATCAGCGACGACCCCCTGGGGGCCTTGCG
GCAACTGCTGCGAACGGACAACGCGGGCGTCGCAGGTGTTGAAATAGACG
TCTTCTTGGCTAGTCTCAAGGAACTGGCGTACGCCTTGTCGGGCGTTGAG
GAGGGGACGATCAGCGACGACCCCCTGGGGGCCTTGCGGCAACTGCTGCG
AACGGACAACGCGGGCGTCGCAGGTGTTGAAATACTGGCGGAGTTTGCGC
AGGCGCTGCCAGGGGACTCTCGGAAGACGGATGCCTTGCTAGAGCTGGCG
GAGTTTGCGCAGGCGCTGCCAGGGGACTCTCGGAAGACGGATGCCTTGCT
AGAGGTTGGCTCAGAGGTTGTGCAGAACCTCGCCGATAAGACAAGCCAAA
GGCTGAACGGGCTCTTGTCAGTGATGGCAACATCCGGCGGTTCTAGGGAC
ACAGGGAAGCAGGAGACGACCCCCCGTGCGAAGGAGAAGATGGCCGGGCC
GCCCAGCCCGCCATAGGTTGGCTCAGAGGTTGTGCAGAACCTCGCCGATA
AGACAAGCCAAAGGCTGAACGGGCTCTTGTCAGTGATGGCAACATCCGGC
GGTTCTAGGGACACAGGGAAGCAGGAGACGACCCCCCGTGCGAAGGAGAA
GATGGCCGGGCCGCCCAGCCCGCCATAG
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