mRNA_H-elongata_contig111816.960.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A2H4YKK3_9PHAE (Amine oxidase n=6 Tax=Sargassum TaxID=3015 RepID=A0A2H4YKK3_9PHAE) HSP 1 Score: 384 bits (986), Expect = 5.450e-129 Identity = 188/220 (85.45%), Postives = 201/220 (91.36%), Query Frame = 1
Query: 1 MVCYGKIIVVACFAENVVSAFVPSSFTVSHGSPRAVSTRRRGRRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 660
MV YGK +VV C A N+VSAFVP +F G+ A S+R RGR G SMIFDYPAPGVRKDYPRPPLE+TSQNQRE+AAFSQ F++MPRPSRPLKVAVIGAGLAGLSCAKYLSDAGH P+VLEARDVLGGKVAAWQDKDGDW+ETGLHIFFGAYPNVNQ+FTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRF+FPDLLPAPLNGLVAILLNNEMLT
Sbjct: 1 MVYYGKAVVVGCLAGNLVSAFVPITFV---GTGSAGSSRLRGRSGALSMIFDYPAPGVRKDYPRPPLEDTSQNQREAAAFSQTFINMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHNPVVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLT 217
BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A2H4YKI9_9PHAE (Amine oxidase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A2H4YKI9_9PHAE) HSP 1 Score: 374 bits (959), Expect = 6.520e-125 Identity = 182/216 (84.26%), Postives = 194/216 (89.81%), Query Frame = 1
Query: 13 GKIIVVACFAENVVSAFVPSSFTVSHGSPRAVSTRRRGRRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 660
G + V A N+ SAF+PS TV G+ ++ R R GVSSMIFDYPAPGVRKDYPRPPLEETSQNQR+SAAFSQ F+DMPRP RPLKVAVIGAGLAGLSCAKYLSDAGH+P+VLEARDVLGGKVAAWQDKDGDW+ETGLHIFFGAYPNVNQ+FTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT
Sbjct: 5 GNVFVALALAGNLASAFMPSCVTVFRGAD-SLRARTHSRNGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRDSAAFSQAFVDMPRPDRPLKVAVIGAGLAGLSCAKYLSDAGHEPVVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 219
BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A2H4YKJ4_SACJA (Amine oxidase n=2 Tax=Laminariales TaxID=2886 RepID=A0A2H4YKJ4_SACJA) HSP 1 Score: 366 bits (939), Expect = 7.230e-122 Identity = 181/216 (83.80%), Postives = 191/216 (88.43%), Query Frame = 1
Query: 13 GKIIVVACFAENVVSAFVPSSFTVSHGSPRAVSTRRRGRRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 660
G V+ A + AFVPSS TV G+ V R+ + V SMIFDYPAPGVRKDYPRPPLEETSQNQR+SAAFSQ F+DMPRP RPLKVAVIGAGLAGLSCAKYLSDAGH+PIVLEARDVLGGKVAAWQDKDGDW+ETGLHIFFGAYPNVNQ+FTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT
Sbjct: 6 GDAFVLLMLAGKMALAFVPSSLTVFRGTAPLV-VGRQSKTSVPSMIFDYPAPGVRKDYPRPPLEETSQNQRDSAAFSQTFIDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHEPIVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 220
BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: D8LPN3_ECTSI (Amine oxidase n=8 Tax=Phaeophyceae TaxID=2870 RepID=D8LPN3_ECTSI) HSP 1 Score: 355 bits (910), Expect = 1.870e-117 Identity = 178/209 (85.17%), Postives = 185/209 (88.52%), Query Frame = 1
Query: 40 AENVVSAFVPSSFTVSHGSPRAVSTRRRG--RRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 660
A +SAFV T G + S R+ R GVSSMIFD+PAPG RKDYPRPPLEETS+NQRESAAFSQ FLDMPRP RPLKVAVIGAGLAGLSCAKYLSDAGHKP+VLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQ+FTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFP LLPAPLNGLVAILLNNEMLT
Sbjct: 15 AGKTISAFVLPPATSFTGVGLSGSARQSAIRRNGVSSMIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAFLDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPVVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLT 223
BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A2H4YKJ3_9PHAE (Amine oxidase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A2H4YKJ3_9PHAE) HSP 1 Score: 341 bits (875), Expect = 3.220e-112 Identity = 167/203 (82.27%), Postives = 181/203 (89.16%), Query Frame = 1
Query: 55 SAFVPSSFTVSHGSPRAVSTRRRGRRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLTL 663
+ FV SS T+ G+ R R GV+SMIFDYPAPGVRKDYPRPPLEETSQNQR+SAAFS+ FL++PRP RPLKVAVIGAGLAGLSCAKYLSDAGH+P+VLEARDVLGGKV+AWQDKDGDWVETGLHIFFGAYPNVNQ+F EL I DRLQWKSHSMIFAMPGQ+TA+GFQRFSRFEF DLLPAPLNGLVAILLN EMLTL
Sbjct: 20 NGFVSSSTTLRKGTAPP-GAGARSRNGVTSMIFDYPAPGVRKDYPRPPLEETSQNQRDSAAFSRSFLELPRPERPLKVAVIGAGLAGLSCAKYLSDAGHQPLVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNQMFKELDIEDRLQWKSHSMIFAMPGQKTAEGFQRFSRFEFTDLLPAPLNGLVAILLNTEMLTL 221
BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A2H4YKJ7_9PHAE (Amine oxidase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A2H4YKJ7_9PHAE) HSP 1 Score: 328 bits (840), Expect = 6.680e-107 Identity = 160/189 (84.66%), Postives = 170/189 (89.95%), Query Frame = 1
Query: 100 RAVSTRRRGRR--GVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 660
R+ R R RR GVSSMIFDYP GVRKDYPRPPLEETSQNQR++A+FSQ D+PR RPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKV+AWQDKDGDWVETGLHIFFGAYPNVNQ+F EL I DRLQWKSHSMIFAMPGQQT DGFQRFSRF+FP LLPAPLNGLVAILLNN+ML+
Sbjct: 36 RSAVARTRARRADGVSSMIFDYPPQGVRKDYPRPPLEETSQNQRDAASFSQAIADLPRTERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNQMFKELDIEDRLQWKSHSMIFAMPGQQTEDGFQRFSRFDFPALLPAPLNGLVAILLNNDMLS 224
BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A835Z8Q9_9STRA (15-cis-phytoene desaturase, chloroplastic/chromoplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q9_9STRA) HSP 1 Score: 293 bits (751), Expect = 5.300e-94 Identity = 135/169 (79.88%), Postives = 152/169 (89.94%), Query Frame = 1
Query: 154 DYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 660
DYPAPGVR+D+PRPPLEETS+NQR SA S+ +PRP +PLKVA+IGAGLAGLS AKYL+DAGH+P + E+RDVLGGKV+AWQD DGDWVETGLHIFFGAYPNVNQ+F ELGI DRLQWKSHSMIFAMPGQQTA+GFQRFSRFEFP LPAP+NG+ AIL+NNEMLT
Sbjct: 14 DYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLT 182
BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: W7TCB4_9STRA (Amine oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCB4_9STRA) HSP 1 Score: 254 bits (649), Expect = 4.010e-78 Identity = 129/210 (61.43%), Postives = 151/210 (71.90%), Query Frame = 1
Query: 34 CFAENVVSAFVPSSFTVSHGSPRAVSTRRRGRRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVI-GAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 660
CF+ P S HG R ST R ++ + DYP PG R+DYPRP LEETS + + + S++ PRP VI GAGLAGLS AKYL DAG KPIVLEARDVLGGKV+AWQDKDGDW+ETGLHIFFGAYPN+ ++F EL I +RLQWKSHSMIFAMPG+Q A+G QRFSRF+FP LPAP NG++AILLN+EMLT
Sbjct: 17 CFSVQAFIPQTPLSELARHGRSRQSSTSRLVP--SANFLVDYPPPGERRDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKPTVVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLT 224
BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A7S2RK35_9STRA (Amine oxidase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK35_9STRA) HSP 1 Score: 241 bits (616), Expect = 5.740e-73 Identity = 116/169 (68.64%), Postives = 141/169 (83.43%), Query Frame = 1
Query: 157 YPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLTL 663
+PAPG ++DYPRP LEETS N RE++ S+ MPRP+ +V VIG GLAGLS AK+L DAGH+P+V+EARDVLGGKVAAWQD+DGDW ETGLHIFFGAYPN+ ++F +L I DRLQWKSHSMIFAMPGQ+ +G Q+FSRF+F +L PAPLNG++AIL NN+MLTL
Sbjct: 58 WPAPGEQRDYPRPNLEETSPNFREASEASEAIKQMPRPTEKKRVVVIGGGLAGLSTAKHLVDAGHEPLVIEARDVLGGKVAAWQDEDGDWTETGLHIFFGAYPNMMKLFKDLDIEDRLQWKSHSMIFAMPGQRDDNGDQKFSRFDFEEL-PAPLNGVLAILGNNDMLTL 225
BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A397YCI1_BRACM (Amino_oxidase domain-containing protein n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A397YCI1_BRACM) HSP 1 Score: 228 bits (582), Expect = 4.660e-72 Identity = 117/183 (63.93%), Postives = 134/183 (73.22%), Query Frame = 1
Query: 112 TRRRGRRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 660
TR R RR + V D PRP LE T N E+A+ S F PRP++PLKV + GAGLAGLS AKYL+DAGHKP++LEARDVLGGK+AAW+D+DGDW ETGLHIFFGAYPNV +F ELGI DRLQWK HSMIFAMP + FSRF+FPD+LPAPLNG+ AIL NNEMLT
Sbjct: 43 TRTRRRRSAGPLQV------VCVDIPRPELENTV-NFLEAASLSASFRSAPRPAKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPG-----EFSRFDFPDVLPAPLNGIWAILRNNEMLT 213 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig111816.960.1 >prot_H-elongata_contig111816.960.1 ID=prot_H-elongata_contig111816.960.1|Name=mRNA_H-elongata_contig111816.960.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=222bp MVCYGKIIVVACFAENVVSAFVPSSFTVSHGSPRAVSTRRRGRRGVSSMIback to top mRNA from alignment at H-elongata_contig111816:757..1966+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig111816.960.1 ID=mRNA_H-elongata_contig111816.960.1|Name=mRNA_H-elongata_contig111816.960.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1210bp|location=Sequence derived from alignment at H-elongata_contig111816:757..1966+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig111816:757..1966+ >mRNA_H-elongata_contig111816.960.1 ID=mRNA_H-elongata_contig111816.960.1|Name=mRNA_H-elongata_contig111816.960.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1332bp|location=Sequence derived from alignment at H-elongata_contig111816:757..1966+ (Himanthalia elongata Himel1 dioecious)back to top |