mRNA_H-elongata_contig111444.937.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig111444.937.1 vs. uniprot
Match: A0A6H5KU75_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU75_9PHAE) HSP 1 Score: 285 bits (730), Expect = 1.010e-87 Identity = 166/321 (51.71%), Postives = 212/321 (66.04%), Query Frame = 1
Query: 1 IDFAMTIMRDMYTEDTA-GESLVKAAAIFGMMAGQLLFGTLGDVVGRELALCYTLLVCFLGAAGSA------SVFGTFIFQQLFFWRLVIGIGAGGVYPLAATLARES-----------GEYGKEDTGGTTVALMFSMQGVGYLTARVTGYVLVSLLPNNMEMAWRLQLGLGAVLPLIVMATIELSLAQESQYDLM---LSEERRMQERGALQNRDGTDGPEVSRLMRMWMALPDKKRLISSLIGTAGSWFLFDVTFYGNQLYQGDVLEGVFGTAETTRAEAAQHIALDMVGLPGYFATVALVGSMGPKQIQVVPLLSLSL 900
+ A+ IM +Y ++A ESLV +AAI GMMAGQ++FG LGD +GR+LALC TLLVC GAAGSA + G IF+QL +WR+++GIGAGGVYPLAATLAR S G G EDTG T+VALMFSMQGVGYL A +TG+VL++ P + WR LGLGAVLPL +Y L+ L EE ++ ++ R G EV +R W+A+ DK+RL+ L+GTAGSWFLFDVTFYGNQLY+ DVLE VFG AE+ R EA+Q + +V LPGYF VAL+ MGP+++QV L+++L
Sbjct: 78 VGLALKIMAKIYPSESATDESLVSSAAILGMMAGQVIFGALGDCLGRQLALCCTLLVCGAGAAGSALLTFEHGIIGGDIFRQLLYWRVLLGIGAGGVYPLAATLARASRISGRCSRLNGGSGGDEDTGSTSVALMFSMQGVGYLAAHLTGFVLLTAFPEPSSLTWRSLLGLGAVLPLGXXXXXXXXXXXXXRYRLVQSSLGEEXXXEDAMGVR-RGGGASDEVPSPVRFWLAVRDKRRLLMKLVGTAGSWFLFDVTFYGNQLYEEDVLEAVFGNAESLRDEASQDSLVALVALPGYFVAVALISRMGPRRVQVQGFLAMAL 397
BLAST of mRNA_H-elongata_contig111444.937.1 vs. uniprot
Match: D8LQ39_ECTSI (Putative inorganic phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ39_ECTSI) HSP 1 Score: 226 bits (576), Expect = 1.860e-68 Identity = 138/270 (51.11%), Postives = 168/270 (62.22%), Query Frame = 1
Query: 1 IDFAMTIMRDMYTEDTA-GESLVKAAAIFGMMAGQLLFGTLGDVVGRELALCYTLLVCFLGAAGSA------SVFGTFIFQQLFFWRLVIGIGAGGVYPLAATLARES-----------GEYGKEDTGGTTVALMFSMQGVGYLTARVTGYVLVSLLPNNMEMAWRLQLGLGAVLPLIVMATIELSLAQESQYDLMLSE--ERRMQERGALQNRDGTDGPEVSRLMRMWMALPDKKRLISSLIGTAGSWFLFDVTFYGNQLYQGDVLEGV 750
+ A+ IM +Y ++A ESLV +AAI GMMAGQ++FG LGD +GR+LAL TLLVC GAAGSA + G IF+QL +WR+++GIGAGGVYPLAATLAR S G G EDTG T+VALMFSMQGVGYL A +TG+VL++ P +AWR LGLGAVLPL L+ S E E R G EVS +R W+A+ DK+RL+ L+GTAGSWFLFDVTFYGNQL L+ V
Sbjct: 78 VGLALKIMAKIYPSESATDESLVSSAAILGMMAGQVIFGALGDCLGRQLALSCTLLVCGAGAAGSALLTFEHGLIGGDIFRQLLYWRVLLGIGAGGVYPLAATLARASRISGWCSRLNGGSGGDEDTGSTSVALMFSMQGVGYLAAHLTGFVLLTTFPEPSSLAWRSLLGLGAVLPLGXXXXXXXXXXXXXXXXLVQSSLGEEEEDEDAIGVPRGGGASDEVSSPVRFWLAVRDKRRLLMKLVGTAGSWFLFDVTFYGNQLLTPQALQDV 347
BLAST of mRNA_H-elongata_contig111444.937.1 vs. uniprot
Match: A0A7S2V487_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V487_9STRA) HSP 1 Score: 162 bits (411), Expect = 2.720e-43 Identity = 107/295 (36.27%), Postives = 159/295 (53.90%), Query Frame = 1
Query: 55 ESLVKAAAIFGMMAGQLLFGTLGDVVGRELALCYTLLVCFLGAAGSASVFGTFIFQQLFFWRLVIGIGAGGVYPLAATLARESGEYGKEDTGGTTVALMFSMQGVGYLTARVTGYVLVSLLPNNMEMAWRLQLGLGAVL---PLIVMATIELSLAQESQYDLMLSEERRMQERGALQNRD-------------------GTDGPEVSRLMRMWMALPDKKRLISSLIGTAGSWFLFDVTFYGNQLYQGDVLEGVFGTAETTRAEAAQHIALDMVGLPGYFATVALVGSMGPKQIQ 873
+SL A GM+ GQ+ G LGD +GR AL L + +G+ GSA +G +F Q+ WR ++GIGAGGVYP+AAT A+ES T VA +FSMQG+G+ A T Y+++ + + ++ WRL LG GA+ L ++ IE + ++ + + + G++ + D G G + L+ + L D ++L ++G AG+WFLFDVTFYGN L+QG VLE VFG ETTR A Q + + +PGY+ + + MGPK +Q
Sbjct: 4 KSLCSTALFVGMVIGQVGLGFLGDWLGRRQALVTALFLGIVGSLGSALSYGPGVFLQVALWRFILGIGAGGVYPIAATYAKES--CPDPHLQATVVAFVFSMQGLGHFLAPATTYLVLQTV-ESADLQWRLNLGFGALQLIGVLCLLLAIEGKMKKKKKTVTIAPPQVEEDGEGSVDSGDAPVSLPMSPRNSSANKAQQGLWGSLCTSLVEVLRLLRDPEQL-KLVVGAAGTWFLFDVTFYGNTLFQGQVLENVFGATETTREVARQEMVVYAFAVPGYYLALFFMARMGPKIMQ 294
BLAST of mRNA_H-elongata_contig111444.937.1 vs. uniprot
Match: B8BUN8_THAPS (Phosphate transporter (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUN8_THAPS) HSP 1 Score: 154 bits (390), Expect = 1.090e-40 Identity = 104/273 (38.10%), Postives = 148/273 (54.21%), Query Frame = 1
Query: 70 AAAIFGMMAGQLLFGTLGDVVGRELALCYTLLVCFLGAAGSASVFGTFIFQQLFFWRLVIGIGAGGVYPLAATLARESGEYGKEDTGGTTVALMFSMQGVGYLTARVTGYVLVSLLPNNMEMAWRLQLGLGAVLPLIVMATIELSLAQ---ESQYDLMLSEERRMQERGALQNRDGTDGPEVSRLM--RMWMALPDKKRLISSLIGTAGSWFLFDVTFYGNQLYQGDVLEGVFGTAETTRAEAAQHIALDMVGLPGYFATVALVGSMGPKQIQ 873
+A I GM+ GQL G LGD +GR +A+ + + A SA V + + R ++G+G GGVYP+AAT++ ES E+ G VAL FSMQGVGYLT + Y LVS+L ++AWRL LG G+ LP + + I L + E D +L + G +Q++ P+ RL + + + L ++GTA W LFDV FYGN L+Q VL FG+AET + ++ LPGYF +VA++G PK+IQ
Sbjct: 2 SALIAGMIIGQLGGGLLGDWLGRHMAMAVVMSLQVAAAFWSAWVGLLGVSESFASCRFLLGVGCGGVYPIAATISAESCTTSSENRG-KLVALTFSMQGVGYLTMNLVAYALVSVLGEESDLAWRLLLGFGS-LPGLALIGIRLYFRRAYDEVNGDALLKD-------GLIQHQHEKKQPKRVRLAPTSLLQQIQSEPHLFRKILGTALCWLLFDVLFYGNALFQPVVLSSAFGSAETILTTVRDSTIISIMALPGYFVSVAMLGKQSPKRIQ 265
BLAST of mRNA_H-elongata_contig111444.937.1 vs. uniprot
Match: A0A7S4TB30_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TB30_9STRA) HSP 1 Score: 154 bits (388), Expect = 3.840e-39 Identity = 114/332 (34.34%), Postives = 164/332 (49.40%), Query Frame = 1
Query: 1 IDFAMTIMRDMYTEDTAGESLVKAAAIFGMMAGQLLFGTLGDVVGRELALCYTLLVCFLGAAGSASVFG---------------------------TFIFQQLFFWRLVIGIGAGGVYPLAATLARESGEYGKEDTGGTTVALMFSMQGVGYLTARVTGYVLVSLLPNNMEMAWRLQLGLGAV--LPLIVMATIELSLAQESQYDLMLSEERRMQERGALQNRDGTDG---PEVSRLMRMWMALPDKKRLISSLIGTAGSWFLFDVTFYGNQLYQGDVLEGVFGTAETTRAEAAQHIALDMVGLPGYFATVALVGSMGPKQIQVVPLLSLSL 900
+ A+ IM +Y +SL + I GM+ GQL G LGD +GR A+ + + + A SA +G I+ L WR ++G+G GGVYPLAATL ES ++ G VAL FSMQGVGYL + + + LV++L ++AWR+ LGLG V L LI + + Q + ++E ++ + R+ + G P VS L A+ +++L L+G GSW LFDV FYGN L+Q VL FG+AET + + V LPGYF +V +G PK IQ+ L +S+
Sbjct: 91 VSIALKIMGSIYEGTDHLKSLCTSTLIAGMIVGQLTGGALGDWMGRHAAMACVMCLQVVSAFMSALSYGWNNEGVESWDVSSSIGLNVLRVMGIKSLSIYHVLAGWRFLLGVGCGGVYPLAATLTAESST--EKSNRGRLVALTFSMQGVGYLASPLVAWALVTILGETSDVAWRILLGLGCVPGLFLIAVRVGRRKIRSRDQTNEKSTKENAAKDAEVTKARNLSSGARLPAVSILD----AIRTEEQLGRKLLGAGGSWLLFDVLFYGNTLFQPVVLSAAFGSAETVSVTIRDTVFIAAVALPGYFISVFAIGKQSPKYIQMQGFLVMSI 416
BLAST of mRNA_H-elongata_contig111444.937.1 vs. uniprot
Match: A0A7S4TAR7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TAR7_9STRA) HSP 1 Score: 154 bits (388), Expect = 6.550e-39 Identity = 114/332 (34.34%), Postives = 164/332 (49.40%), Query Frame = 1
Query: 1 IDFAMTIMRDMYTEDTAGESLVKAAAIFGMMAGQLLFGTLGDVVGRELALCYTLLVCFLGAAGSASVFG---------------------------TFIFQQLFFWRLVIGIGAGGVYPLAATLARESGEYGKEDTGGTTVALMFSMQGVGYLTARVTGYVLVSLLPNNMEMAWRLQLGLGAV--LPLIVMATIELSLAQESQYDLMLSEERRMQERGALQNRDGTDG---PEVSRLMRMWMALPDKKRLISSLIGTAGSWFLFDVTFYGNQLYQGDVLEGVFGTAETTRAEAAQHIALDMVGLPGYFATVALVGSMGPKQIQVVPLLSLSL 900
+ A+ IM +Y +SL + I GM+ GQL G LGD +GR A+ + + + A SA +G I+ L WR ++G+G GGVYPLAATL ES ++ G VAL FSMQGVGYL + + + LV++L ++AWR+ LGLG V L LI + + Q + ++E ++ + R+ + G P VS L A+ +++L L+G GSW LFDV FYGN L+Q VL FG+AET + + V LPGYF +V +G PK IQ+ L +S+
Sbjct: 91 VSIALKIMGSIYEGTDHLKSLCTSTLIAGMIVGQLTGGALGDWMGRHAAMACVMCLQVVSAFMSALSYGWNNEGVESWDVSSSIGLNVLRVMGIKSLSIYHVLAGWRFLLGVGCGGVYPLAATLTAESST--EKSNRGRLVALTFSMQGVGYLASPLVAWALVTILGETSDVAWRILLGLGCVPGLFLIAVRVGRRKIRSRDQTNEKSTKENAAKDAEVTKARNLSSGARLPAVSILD----AIRTEEQLGRKLLGAGGSWLLFDVLFYGNTLFQPVVLSAAFGSAETVSVTIRDTVFIAAVALPGYFISVFAIGKQSPKYIQMQGFLVMSI 416
BLAST of mRNA_H-elongata_contig111444.937.1 vs. uniprot
Match: A0A1V9Z843_9STRA (Inorganic phosphate transporter n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z843_9STRA) HSP 1 Score: 146 bits (368), Expect = 7.590e-37 Identity = 105/304 (34.54%), Postives = 162/304 (53.29%), Query Frame = 1
Query: 1 IDFAMTIMRDMYTED--TAG-ESLVKAAAIFGMMAGQLLFGTLGDVVGRELALCYTLLVCFLGAAGSASVFGTFIFQQLFFW---RLVIGIGAGGVYPLAATLARESGEYGKEDTGGTTVALMFSMQGVGYLTARVTGYVLVSLLP---NNMEMAWRLQLGLGAVLPLIVMATIELSLAQESQYDLMLSEERRMQERGALQNRDGTDGPEVSRLMRMWMALPDKKRLISSLIGTAGSWFLFDVTFYGNQLYQGDVLEGVFGTAETTRAEAAQHIALDMVGLPGYFATVALVGSMGPKQIQVVPL 885
I+ I++D YT+ TA +S V +AA+ G + GQL FG LGDV GR++ + T + +G SA+ +G L+F R ++G G GG YPLAA + E + VAL FS+QGVG+L A + G ++V++L N+E+ WR+ G+G VLP + + ++ + Y M++++ M R +R WM + K SL+GTAG+WFLFD+ FY L+ +L V G + T R A Q++ + V LPGY+ V + +MG K+IQ++ L
Sbjct: 22 INIVNVILQDQYTKKVYTAEMKSNVSSAALIGAVLGQLAFGFLGDVYGRKICMIATCAILIIGGILSAAAYGGSGHNTLWFLIVARGILGFGIGGEYPLAAAASSEDATSAADRN--RRVALTFSLQGVGFLFAGLMGLMMVNVLDPTEKNLEIMWRVLFGIG-VLPALFLVYYRITAEETHVYKAMVADQVNM------------------RTVR-WMFII--KHYGRSLVGTAGTWFLFDIVFYAQNLFSASILS-VVGASSTLRTIALQNVIISCVALPGYYVAVFFINTMGRKRIQLMGL 300
BLAST of mRNA_H-elongata_contig111444.937.1 vs. uniprot
Match: A0A7S2SLC5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLC5_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.050e-36 Identity = 112/325 (34.46%), Postives = 169/325 (52.00%), Query Frame = 1
Query: 34 YTEDTAGESLVKAAAIFGMMAGQLLFGTLGDVVGRELALCYTLLVCFLGA--AGSASVFGTFIFQQLFFWRLVIGIGAGGVYPLAATLARESGEYGKEDTGGTTVALMFSMQGVGYLTARVTGYVLVSLLPNN---MEMAWRLQLGLGAVLPLIVMATI-------------ELSLAQESQY---------DLMLSEERRMQER--GALQNRDGTDGPEVSRLMRMWMALPDKKRLISSLIGTAGSWFLFDVTFYGNQLYQGDVLEGVFG-------TAETTRAEAAQHIALDMVGLPGYFATVALVGSMGPKQIQVVPLLSLSL 900
++ ++ ES+V + G + GQL FG LGD++GR+ A+ T++ LGA +G+AS IF QL WRL++G+G GGVYPLAAT+A ES + D G T AL+FSMQG+G + + + + ++ N+ + WRL +GA LP ++MA EL + E Q+ ++ S QE GA+++ D P L W ++ + LIGTAG+WF+FD TFY N L+ VL +FG T T + Q + + ++GLPGYF V + +G K IQ++ +SL
Sbjct: 12 HSTSSSDESMVNSGVFAGAILGQLTFGYLGDLMGRQRAMKLTMVCSVLGALLSGTASGGSEAIFGQLTTWRLLLGLGVGGVYPLAATVATESASH--SDRGRNT-ALVFSMQGIGQVLSPLVALFMWHVVANSEGKTDWDWRLMFMVGA-LPGLLMAPFKGKETGKRQNGASELEVGIEGQFFDDKHSLAAPIVTSPRSDEQELVDGAIEHGDFQSQPPTGALEIAWA---NRGEFLPKLIGTAGTWFVFDFTFYANALFAPTVLSTMFGDDDTDETTPHTVNMKIQQLLIVYLMGLPGYFVAVYFMDYLGRKNIQLMGFCMMSL 329
BLAST of mRNA_H-elongata_contig111444.937.1 vs. uniprot
Match: Q54SQ1_DICDI (Major facilitator superfamily protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54SQ1_DICDI) HSP 1 Score: 146 bits (369), Expect = 5.120e-36 Identity = 96/300 (32.00%), Postives = 159/300 (53.00%), Query Frame = 1
Query: 1 IDFAMTIMRDMYTEDTAGESLVKAAAIFGMMAGQLLFGTLGDVVGRELALCYTLLVCFLGAAGSASVFGTF---IFQQLFFWRLVIGIGAGGVYPLAATLARESGEYGKEDTGGTTVALMFSMQGVGYLTARVTGYVLVSLL-PNNMEMAWRLQLGLGAVLPLIVMATIELSLAQESQYDLMLSEERRMQERGALQNRDGTDGPEVSRLMRMWMALPDKKRLISSLIGTAGSWFLFDVTFYGNQLYQGDVLEGV-FGTAETTRAE----AAQHIALDMVGLPGYFATVALVGSMGPKQIQ 873
I+ + I++ +Y E + S+V A++G + GQ++FG L D +GR++ TL +GA SA F IF L WR ++G G GG YPL+AT++ ES ++ G+ VA +FSMQG+G + + V VL+ + N++++ WRL LG G + P +VM + + + + S + ++Q++ + +M+ W +L GTAG WF+FD+TFY N L+ G ++ + F A T E + L ++GLPGYF +AL+ +G K++Q
Sbjct: 222 INLVLVILQKLYKESSGDSSMVSTGALWGAVGGQIVFGFLADRIGRKIGFIITLSFIIVGAFASAVSFDKAALNIFGMLTLWRTILGFGIGGEYPLSATISSESSSSDRKR--GSQVASVFSMQGLGIILSPVVVIVLLKICGSNHIDLVWRLALGFGGI-PGLVMIYFRIKMKETKSF----SNKAKIQKKQMFLS-----------IMKYW----------KTLAGTAGGWFIFDITFYANGLFNGTIVSLIGFDDASNTYDEIWNTTLVSLYLALIGLPGYFVGIALIDRLGRKKLQ 493
BLAST of mRNA_H-elongata_contig111444.937.1 vs. uniprot
Match: L8HE38_ACACA (Transporter, major facilitator superfamily superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HE38_ACACA) HSP 1 Score: 144 bits (362), Expect = 2.760e-35 Identity = 103/291 (35.40%), Postives = 152/291 (52.23%), Query Frame = 1
Query: 19 IMRDMYTEDTAGESLVKAAAIFGMMAGQLLFGTLGDVVGRELALCYTLLVCFLGAAGSASVFG-TFIFQQLFFWRLVIGIGAGGVYPLAATLARESGEYGKEDTGGTTVALMFSMQGVGYLTARVTGYVLVSLLPNNMEMAWRLQLGLGAVLPLIVMATIELSLAQESQYDLMLSEERRMQERGALQNRDGTDGPEVSRLMRMWMALPDKKRLISSLIGTAGSWFLFDVTFYGNQLYQGDVLEGV-FGTAETTRAE----AAQHIALDMVGLPGYFATVALVGSMGPKQIQ 873
IM ++Y + SLV AA+ G M GQLLFG + D+VGR + T+ V LGA S++V ++ L +RLV+G G GG YPLAA++A E+ E + G VA F+MQGVG L + +L+ + +++++ WRL LGLGAV P +V L++A+ Q+ S ER R + R+ W+ L KR LIGT +W LFD FYGN L+ +L+ + +T RA A + + + LPGY V L+ +G + +Q
Sbjct: 120 IMAEVYPQTDTDASLVSTAALLGAMLGQLLFGFIADMVGRRIGFAITIGVFTLGAIASSAVGNRAVVYYLLALFRLVVGFGVGGEYPLAASIASENAEDANQKRG-RAVAFTFAMQGVGALAVPLVALLLL-IWSSDLDLVWRLCLGLGAV-PGLVTLPFRLTMAETGQFKAAQSRERLRGSRSLWR-----------RVQWRWVVL---KRYWRELIGTTLTWLLFDALFYGNTLFTPTLLDSMGMADGDTPRARLQNLAELSLIIAAIALPGYVVAVLLIDRIGRRYMQ 393 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111444.937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig111444.937.1 >prot_H-elongata_contig111444.937.1 ID=prot_H-elongata_contig111444.937.1|Name=mRNA_H-elongata_contig111444.937.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=300bp MTIMRDMYTEDTAGESLVKAAAIFGMMAGQLLFGTLGDVVGRELALCYTLback to top mRNA from alignment at H-elongata_contig111444:291..1475- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig111444.937.1 ID=mRNA_H-elongata_contig111444.937.1|Name=mRNA_H-elongata_contig111444.937.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1185bp|location=Sequence derived from alignment at H-elongata_contig111444:291..1475- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig111444:291..1475- >mRNA_H-elongata_contig111444.937.1 ID=mRNA_H-elongata_contig111444.937.1|Name=mRNA_H-elongata_contig111444.937.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1800bp|location=Sequence derived from alignment at H-elongata_contig111444:291..1475- (Himanthalia elongata Himel1 dioecious)back to top |