mRNA_H-elongata_contig1103.847.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1103.847.1
Unique NamemRNA_H-elongata_contig1103.847.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1103.847.1 vs. uniprot
Match: A0A6H5KJJ4_9PHAE (Fatty acyl-CoA reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJJ4_9PHAE)

HSP 1 Score: 441 bits (1135), Expect = 1.070e-142
Identity = 293/524 (55.92%), Postives = 330/524 (62.98%), Query Frame = 1
Query:  775 MLAAGGA--LWCAARLAR*REEIFAWSPIAPEALARASASASARRGASGAFSKGETPGSISGI-CRNVRGSAQPIEC--GDDPVGAIFRPGTEVHRAFCAP------------------------TASSSDGAVVFLTGVTGLVGRMVLFDLLKQGAAVSTDRPGEGSATDREADASRGSD-----GSAQKRLKRVVVLVRSKKGVSASHRLASIRDSPMFRPLRESGAWIDEAEEANTQSTSGAYDPGASRLCPSSAAFGSRRAAAAA---RARGAFVTVVEGELGKEGVGLTPEAHAMLAEASVTHSLHCAASVSFSDPLAKAAATNVTGALRVAALVASWPSCRTLVHVSTAFVHGGNTGTEARPLSQELPDLGGRNAERLYRSAQNAPGGYSSSGVGGRGGPGPGKHALEAMEDLGYPNTYTFTKALGEHLLTRALRAHNRRLGR----AERSEKE-----------------MQTQKQCDAPAP-GLRLRIVRPSIVGPAWVFPWPGWTGEQPSTVTGE 2169
            +LAA GA  LWCA R+AR REEIFA SP+ PEAL+RA+A A+A  G       G   G  SG  C  +     P E    DDPVG +FRPGT   R FCAP                         A+   GAVVFLTGVTGLVG+MVLFDLL+QGAAVS+  P   S  D EA  + G       G A + L+ VVVLVR KKGV+ S RLASIRDS MFRPLRESGAW+DE  E +T        P A R  P    F   R A      + RGA V  VEGELG EG+GL+ E+ A+L  A VTH+LHCAASVSFSDPLA+AAATNVTGALRVAALVASWPSC TL+HVSTAFVHGG +GT + PL QELPDLGGR+ ERLYRSAQ  P    + G         GK A++AM DLGYPNTYTFTKALGEHLL RAL AHNRRL R    A  S+ E                 + +     +P P  LRLR+VRPSIVGPAWVFPWPGWTGEQPSTVTGE
Sbjct:   89 LLAAVGAACLWCAVRVARWREEIFAQSPVVPEALSRAAAVAAAAAGVP--LGPGGRAGRDSGDDCGRMAEELPPAEACVDDDPVGCLFRPGTRASRDFCAPRLMPDASSSVRGGCHSVNGGSTATAAAEGSGAVVFLTGVTGLVGQMVLFDLLRQGAAVSSGGP---SCDDDEAGEALGGGKAGLGGVASEGLRSVVVLVRGKKGVAPSDRLASIRDSAMFRPLRESGAWVDE--ETDT--------PSAERASP--LPFPPSREALGLPPKKRRGAVVIAVEGELGGEGLGLSAESRALLTGAGVTHALHCAASVSFSDPLAEAAATNVTGALRVAALVASWPSCGTLIHVSTAFVHGGKSGTASCPLPQELPDLGGRSPERLYRSAQRTPSAPDAGGXXXXXXX-XGKEAVDAMADLGYPNTYTFTKALGEHLLVRALSAHNRRLDRLAAAAAASDVEEGXXXXXXXRLAAGGRGLTSGDSRGSPKPCRLRLRVVRPSIVGPAWVFPWPGWTGEQPSTVTGE 594          
BLAST of mRNA_H-elongata_contig1103.847.1 vs. uniprot
Match: D7FUE9_ECTSI (Alkylglycerone-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE9_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 1.350e-113
Identity = 238/392 (60.71%), Postives = 268/392 (68.37%), Query Frame = 1
Query: 1066 ASSSDGAVVFLTGVTGLVGRMVLFDLLKQGAAVSTDRPGE-GSATDREADASRGSDGSAQKRLKRVVVLVRSKKGVSASHRLASIRDSPMFRPLRESGAWIDEAEEANTQSTSGAYDPGASRLCPSSAAFGSRRAAAAA--RARGAFVTVVEGELGKEGVGLTPEAHAMLAEASVTHSLHCAASVSFSDPLAKAAATNVTGALRVAALVASWPSCRTLVHVSTAFVHGGNTGTEARPLSQELPDLGGRNAERLYRSAQNAPGGYSSSGVGGRGGPGPGKHALEAMEDLGYPNTYTFTKALGEHLLTRALRAHNRRLGRAERSEKEMQTQKQCDAPAPG----------------------LRLRIVRPSIVGPAWVFPWPGWTGEQPSTVTG 2166
            A+   GAVVFLTGVTGLVG+MVLFDLL+QGAA S+   G+ G A +       G  G A   L+ VVVLVR KKGV+ S RLASIRDS MFRPLRESGAW+DE  E +T S + A        CP S     R A      + +GA V  VEGELG EG+GL+ E+ A+LA A VTH+LHCAASVSFSDPLA+AAATNVTGALRVAALVASWPSC TL+HVSTAFVHGG +GT + PL QELPDLGGR+ ERLYRSAQ AP   S +G         GK AL+AM DLGYPNTYTFTKALGEHLL RAL AHNRRL R+  +      ++  D  A G                      LRLR+VRPSIVGPAWVFPWPGWTGEQPSTVTG
Sbjct:   25 AAEGSGAVVFLTGVTGLVGQMVLFDLLRQGAAASSGASGDDGEAREGLGGGEDGLGGVASGGLRAVVVLVRGKKGVAPSDRLASIRDSAMFRPLRESGAWVDE--ETDTPSAARASP----LPCPPS-----REALGLPPKKRQGAVVIAVEGELGGEGLGLSAESRALLAGAGVTHALHCAASVSFSDPLAEAAATNVTGALRVAALVASWPSCGTLIHVSTAFVHGGKSGTASCPLPQELPDLGGRSPERLYRSAQRAPS-ASDAGXXXXXXXXAGKEALDAMADLGYPNTYTFTKALGEHLLVRALSAHNRRLDRSAAAAAAADVEESGDDEAGGRLAXXXXXXXXXXXXXXXEPCRLRLRVVRPSIVGPAWVFPWPGWTGEQPSTVTG 404          
BLAST of mRNA_H-elongata_contig1103.847.1 vs. uniprot
Match: A0A7S2LKQ6_9STRA (Fatty acyl-CoA reductase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LKQ6_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.100e-25
Identity = 94/301 (31.23%), Postives = 133/301 (44.19%), Query Frame = 1
Query: 1258 VVVLVRSKKGVSASHRLASIRDSPMFRPLRESGAWIDEAEEANTQSTSGAYDPGASRLCPSSAAFGSRRAAAAARARGAFVTVVEGELGKEGVGLTPEAHAMLAEASVTHSLHCAASVSFSDPLAKAAATNVTGALRVAALVASWPSCRTLVHVSTAFVHGGNTGTEARPLSQELPDLGGRNAERLYRSAQNAPGGYSSSGVGGRGGPGPGKHALEAMEDLGYPNTYTFTKALGEHLLTRALRAHNRRLGRAERSEKEMQTQKQCDAPAPGLRLRIVRPSIVGPAWVFPWPGWTGEQPSTV 2160
            V VL R+KK +SA  R+A++ D  MF  L            ++ + TS                                V VVEG++ K  +G++      + +  ++H +HCAASV F+  L  AA TN+T +L++  L     +    V++STAFVHGGN G+   PL + L  LG  +AE +Y+S   +                    A  A+ DL +PNTYT +K + EHLL R               +KE  T              IVRP IVGPA   PW GW G+ PST+
Sbjct:   39 VAVLCRAKKKMSAKERIAALLDHDMFEFL------------SSQEKTS-------------------------------LVHVVEGDVAKPNMGMSTTERNRVYQLPLSHVIHCAASVKFNQSLEGAAVTNITSSLQLQQLAKKLKA--KFVYMSTAFVHGGNIGSRNEPLPENLFSLGKYDAEDIYQSMLGSQ-----------------SLASSALNDLRFPNTYTISKCVCEHLLLR---------------DKESDT-------------IIVRPCIVGPACSSPWEGWAGDSPSTL 249          
BLAST of mRNA_H-elongata_contig1103.847.1 vs. uniprot
Match: A0A7S2KA40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KA40_9STRA)

HSP 1 Score: 122 bits (305), Expect = 7.750e-25
Identity = 112/378 (29.63%), Postives = 162/378 (42.86%), Query Frame = 1
Query: 1033 TEVHRAFCAPTASSS-DGAVVFLTGVTGLVGRMVLFDLLKQGAAVSTDRPGEGSATDREADASRGSDGSAQKRLKRVVVLVRSKKGVSASHRLASIRDSPMFRPLRESGAWIDEAEEANTQSTSGAYDPGASRLCPSSAAFGSRRAAAAARARGAFVTVVEGELGKEGVGLTPEAHAMLAEASVTHSLHCAASVSFSDPLAKAAATNVTGALRVAALVASWPSCRT-LVHVSTAFVHGGNTGTEARPLSQELPDLGGRNAERLYRSAQNAPGGYSSSGVGGRGGPGPGKHALEAMEDLGYPNTYTFTKALGEHLLTRALRAHNRRLGRAERSEKEMQTQKQCDAPAPGLRLRIVRPSIVGPAWVFPWPGWTGEQPSTV 2160
            T V +   A ++++  D  +  L+G TG +G ++L +LL     +S D                            VV+LVRSKKGVS+  R+  I  + MF  L                                           +A  + + V VVE ++     G+       + E +++H  HCAA+VSFS PL +AA +N+T +L++  L  S  +     VHVSTAFVHGG TGT+  PL + L  L   +   +Y+S                       +A  AM+DL +PNTYTF+K + EHLL R               E+ + T              I+RPSIVGPA   P+ GW+GE+PSTV
Sbjct:   70 TRVPKIIRATSSTAEEDKRMAILSGSTGFIGSLLLRNLLLNRKTLSLDGG--------------------------VVLLVRSKKGVSSHERVKRILSNSMFDFL-------------------------------------------SATDKESLVHVVEADVTLPNCGMESSLILSIRERNISHVFHCAAAVSFSQPLEEAALSNITSSLQMQLLTKSLRNGDAKFVHVSTAFVHGGETGTKDAPLPESLYSLDPYDPVEIYKSMLATQ-----------------SYASAAMKDLRFPNTYTFSKCVCEHLLQR---------------EQHVDT-------------IIIRPSIVGPAACEPFEGWSGERPSTV 333          
BLAST of mRNA_H-elongata_contig1103.847.1 vs. uniprot
Match: A0A1Z5JCQ4_FISSO (Fatty acyl-CoA reductase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCQ4_FISSO)

HSP 1 Score: 119 bits (299), Expect = 3.470e-24
Identity = 73/218 (33.49%), Postives = 113/218 (51.83%), Query Frame = 1
Query: 1513 GELGKEGVGLTPEAHAMLAEASVTHSLHCAASVSFSDPLAKAAATNVTGALRVAALVASWPSCRTLVHVSTAFVHGGNTGTEARPLSQELPDLGGRNAERLYRSAQNAPGGYSSSGVGGRGGPGPGKHALEAMEDLGYPNTYTFTKALGEHLLTRALRAHNRRLGRAERSEKEMQTQKQCDAPAPGLRLRIVRPSIVGPAWVFPWPGWTGEQPSTVTG 2166
            G+L  E  G++ E   ML  A +TH +HCAA V+F+ P+ +AA  N++ AL++  +   WP+C   VH ST F++    G+E  PL ++L  LG  + + +Y S +                 G  + AL+  ++  +PN Y FTK + EHL+ R              ++ E             + LRIVRP+IVGPAW+ P  GW G++PST++G
Sbjct:  196 GDLQDENCGMSSETLDMLKAAKLTHIVHCAADVNFNRPIPEAAGMNISPALKLQKMSKEWPTCTRFVHCSTCFINP-ECGSEDNPLPEQLYSLGKYDPQDIYDSMR-----------------GDQELALKVKKEFDFPNNYCFTKCVAEHLVAR-------------NNDDEK------------VELRIVRPAIVGPAWLLPKRGWNGDKPSTISG 370          
BLAST of mRNA_H-elongata_contig1103.847.1 vs. uniprot
Match: K0SMF7_THAOC (Alkylglycerone-phosphate synthase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SMF7_THAOC)

HSP 1 Score: 120 bits (300), Expect = 5.020e-24
Identity = 80/223 (35.87%), Postives = 118/223 (52.91%), Query Frame = 1
Query: 1495 FVTVVEGELGKEGVGLTPEA-HAMLAEASVTHSLHCAASVSFSDPLAKAAATNVTGALRVAALVASWPSCRTLVHVSTAFVHGGNTGTEARPLSQELPDLGGRNAERLYRSAQNAPGGYSSSGVGGRGGPGPGKHALEAMEDLGYPNTYTFTKALGEHLLTRALRAHNRRLGRAERSEKEMQTQKQCDAPAPGLRLRIVRPSIVGPAWVFPWPGWTGEQPSTV 2160
             V VVEG++ +   G+TP    + +  + ++H LHCAA+VSFS PL  AA +N+T +L V +L     +  T  ++STAFVHG  TGT++RPL + +  L   + ++LY S   +                   +A  AM DLG+PNTYTF+K + EHLL                 E++++T              I+RPSIVGP+   P+ GW GE+PST+
Sbjct:  882 LVIVVEGDVTQPYCGITPAVIESSIQVSKISHVLHCAAAVSFSQPLEDAATSNITSSLNVQSLAKQLDAKFT--YLSTAFVHGDRTGTKSRPLPEAVFSLKPYDPDKLYESMLGSQ-----------------SYASAAMNDLGFPNTYTFSKCVCEHLLE---------------MERDVET-------------TIIRPSIVGPSVEEPYEGWAGERPSTI 1057          
BLAST of mRNA_H-elongata_contig1103.847.1 vs. uniprot
Match: A0A813A1C6_9DINO (Agps protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A1C6_9DINO)

HSP 1 Score: 116 bits (290), Expect = 8.450e-23
Identity = 95/307 (30.94%), Postives = 138/307 (44.95%), Query Frame = 1
Query: 1249 LKRVVVLVRSKKGVSASHRLASIRDSPMFRPLRESGAWIDEAEEANTQSTSGAYDPGASRLCPSSAAFGSRRAAAAARARGAFVTVVEGELGKEGVGLTPEAHAMLAEASVTHSLHCAASVSFSDPLAKAAATNVTGALRVAALVASWPSCRTLVHVSTAFVHG-GNTGTEARPLSQELPDLGGRNAERLYRSAQNAPGGYSSSGVGGRGGPGPGKHALEAMEDLGYPNTYTFTKALGEHLLTRALRAHNRRLGRAERSEKEMQTQKQCDAPAPGLRLRIVRPSIVGPAWVFPWPGWTGEQPSTVTG 2166
            + ++V++VR + G S + RL  +RD  MF  +RE+                  +D                            V  +EG+  +   G T    +     S+   LHCA  V F  P+ +AA + ++  L++  L + W + R L  VSTAFVH      TEA  L + L +L   +A  LYR A +  GG++ +                AM +LG+PNTYTF KA+ EHL+ RA                       CD+   GL +RIVRPSIVGPAW +P+ GW G++PST+ G
Sbjct:  578 ITKIVLMVRQRSGKSLAERLQKLRDHTMFDEVRET------------------FDK--------------------------LVVGLEGDTSQRNFGWTEAQPSWPHRESLKAVLHCAGDVRFQQPMQQAAVSLISATLQMQQLASQWKAKRFLF-VSTAFVHAVPPPSTEA--LQERLVELRDFDAMELYRDAMSH-GGWAQT----------------AMRELGFPNTYTFCKAVAEHLVIRA-----------------------CDSE--GLDVRIVRPSIVGPAWAYPFIGWAGDKPSTIVG 795          
BLAST of mRNA_H-elongata_contig1103.847.1 vs. uniprot
Match: A0A2K8DNW9_PROMN (Fatty acyl-CoA reductase (Fragment) n=1 Tax=Prorocentrum minimum TaxID=39449 RepID=A0A2K8DNW9_PROMN)

HSP 1 Score: 114 bits (286), Expect = 1.350e-22
Identity = 80/222 (36.04%), Postives = 110/222 (49.55%), Query Frame = 1
Query: 1495 FVTVVEGELGKEGVGLTPEAHAMLAEASVTHSLHCAASVSFSDPLAKAAATNVTGALRVAALVASWPSCRTLVHVSTAFVHGGNTGTEARPLSQELPDLGGRNAERLYRSAQNAPGGYSSSGVGGRGGPGPGKHALEAMEDLGYPNTYTFTKALGEHLLTRALRAHNRRLGRAERSEKEMQTQKQCDAPAPGLRLRIVRPSIVGPAWVFPWPGWTGEQPSTV 2160
             VTV+EG+  ++  G +  A   +    +   LHCAA V F  PL +AA + ++ +L+VA L   W + R L  VSTAFVH     T A  L + L +L   +   LYR A +                  GK A +AM DLG+PNTYTF KA+ EHL+ +A                       C     G++  IVRPSIV PAW  P+ GW+G++PST+
Sbjct:  110 LVTVIEGDTSQKNFGQSDAAGPWVQREPLRVVLHCAADVRFDQPLQQAALSLISASLQVALLAKRWGASRFLF-VSTAFVHAVPAATSA--LQERLVELRDFDPMELYRDAVSH-----------------GKWAGKAMRDLGFPNTYTFAKAVAEHLILQA-----------------------CGTE--GMQAHIVRPSIVTPAWASPYAGWSGDKPSTI 286          
BLAST of mRNA_H-elongata_contig1103.847.1 vs. uniprot
Match: A0A7S2U961_9STRA (Alkylglycerone-phosphate synthase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U961_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.130e-22
Identity = 76/225 (33.78%), Postives = 113/225 (50.22%), Query Frame = 1
Query: 1495 FVTVVEGELGKEGVGLTP-EAHAMLAEASVTHSLHCAASVSFSDPLAKAAATNVTGALRVAALVAS--WPSCRTLVHVSTAFVHGGNTGTEARPLSQELPDLGGRNAERLYRSAQNAPGGYSSSGVGGRGGPGPGKHALEAMEDLGYPNTYTFTKALGEHLLTRALRAHNRRLGRAERSEKEMQTQKQCDAPAPGLRLRIVRPSIVGPAWVFPWPGWTGEQPSTV 2160
             VTVVEG++ +  VG++  +   +  +  ++H  HCAA+V F+  L  AA +N+T +L++ AL  +  W   +  +H+STAFVHG   GT + P+ + L  L   NAE +YRS +                     +A  AM +LG+PNTYTF+K + EHLL R                               +   I+RPSIVGPA   P+ GW G++PST+
Sbjct:   48 LVTVVEGDVTQPDVGMSNNDKERVCNKFIISHVFHCAAAVKFTQTLDDAAVSNITSSLQMQALTKTLKWKKAK-YIHISTAFVHGDRLGTASDPIEESLYSLHPYNAEEIYRSMRETQ-----------------SYASSAMLELGFPNTYTFSKCVCEHLLHRDT----------------------------SVDTIIIRPSIVGPAVQEPYEGWAGDKPSTI 226          
BLAST of mRNA_H-elongata_contig1103.847.1 vs. uniprot
Match: A0A812HR99_9DINO (Ads-1 protein (Fragment) n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812HR99_9DINO)

HSP 1 Score: 114 bits (285), Expect = 3.260e-22
Identity = 96/305 (31.48%), Postives = 134/305 (43.93%), Query Frame = 1
Query: 1255 RVVVLVRSKKGVSASHRLASIRDSPMFRPLRESGAWIDEAEEANTQSTSGAYDPGASRLCPSSAAFGSRRAAAAARARGAFVTVVEGELGKEGVGLTPEAHAMLAEASVTHSLHCAASVSFSDPLAKAAATNVTGALRVAALVASWPSCRTLVHVSTAFVHG-GNTGTEARPLSQELPDLGGRNAERLYRSAQNAPGGYSSSGVGGRGGPGPGKHALEAMEDLGYPNTYTFTKALGEHLLTRALRAHNRRLGRAERSEKEMQTQKQCDAPAPGLRLRIVRPSIVGPAWVFPWPGWTGEQPSTVTG 2166
            ++V+LVR + G + + RL  +RD  MF  +R                  GA+D                           FV  +EG+  +   G T    +   +  +   LHCA  V F  P+ +AA + ++  L++  L + W + R L  VSTAFVH      TEA  L + L +L   +A  LYR A +                  G  A  AM +LG+PNTYTF KA+ EHL+ RA                       CD+   GL +RIVRPSIVGPAW  P+ GW G++PST+ G
Sbjct:  588 KIVLLVRQRSGKTLAERLQKLRDHTMFDEVR------------------GAFDK--------------------------FVVGLEGDTSRRNFGWTEPNLSWPHKEPLKAVLHCAGDVRFQQPMQQAAVSLISATLQMQQLASQWKAKRFLF-VSTAFVHAVPPPSTEA--LQERLVELRDFDAMELYRDAMSH-----------------GAWAQTAMLELGFPNTYTFCKAVAEHLVIRA-----------------------CDSE--GLDVRIVRPSIVGPAWACPFIGWAGDKPSTIVG 803          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1103.847.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJJ4_9PHAE1.070e-14255.92Fatty acyl-CoA reductase n=1 Tax=Ectocarpus sp. CC... [more]
D7FUE9_ECTSI1.350e-11360.71Alkylglycerone-phosphate synthase n=1 Tax=Ectocarp... [more]
A0A7S2LKQ6_9STRA2.100e-2531.23Fatty acyl-CoA reductase (Fragment) n=1 Tax=Leptoc... [more]
A0A7S2KA40_9STRA7.750e-2529.63Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A1Z5JCQ4_FISSO3.470e-2433.49Fatty acyl-CoA reductase n=2 Tax=Fistulifera solar... [more]
K0SMF7_THAOC5.020e-2435.87Alkylglycerone-phosphate synthase n=1 Tax=Thalassi... [more]
A0A813A1C6_9DINO8.450e-2330.94Agps protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A2K8DNW9_PROMN1.350e-2236.04Fatty acyl-CoA reductase (Fragment) n=1 Tax=Proroc... [more]
A0A7S2U961_9STRA2.130e-2233.78Alkylglycerone-phosphate synthase n=1 Tax=Attheya ... [more]
A0A812HR99_9DINO3.260e-2231.48Ads-1 protein (Fragment) n=1 Tax=Symbiodinium nata... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1103contigH-elongata_contig1103:1292..4765 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.0
Seed ortholog evalue2.4e-99
Seed eggNOG ortholog2880.D7FUE9
Preferred nameAGPS
KEGG rclassRC00004,RC00020,RC02886
KEGG koko:K00803,ko:K13356
KEGG ReactionR04311,R09470
KEGG Pathwayko00073,ko00565,ko01100,ko04146,ko04212,map00073,map00565,map01100,map04146,map04212
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005782,GO:0005829,GO:0006605,GO:0006625,GO:0006629,GO:0006662,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0008609,GO:0008610,GO:0008611,GO:0009058,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016740,GO:0016765,GO:0018904,GO:0031090,GO:0031903,GO:0031907,GO:0031974,GO:0031981,GO:0033036,GO:0033365,GO:0034613,GO:0036094,GO:0042579,GO:0042886,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043574,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046485,GO:0046504,GO:0046907,GO:0048037,GO:0050660,GO:0050662,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071949,GO:0072594,GO:0072662,GO:0072663,GO:0097159,GO:0097384,GO:0098588,GO:0098805,GO:1901265,GO:1901363,GO:1901503,GO:1901576
EggNOG free text desc.alkylglycerone-phosphate synthase activity
EggNOG OGsCOG0277@1,COG3320@1,KOG1221@2759,KOG1233@2759
EC1.2.1.84,2.5.1.26
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons4
Model size2172
Cds size1047
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1103.847.1prot_H-elongata_contig1103.847.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1103 3556..4765 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929629.5946877-UTR-H-elongata_contig1103:1291..13601622929629.5946877-UTR-H-elongata_contig1103:1291..1360Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1103 1292..1360 +
1691679097.8931077-UTR-H-elongata_contig1103:1291..13601691679097.8931077-UTR-H-elongata_contig1103:1291..1360Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1103 1292..1360 +
1622929629.6079535-UTR-H-elongata_contig1103:2024..21191622929629.6079535-UTR-H-elongata_contig1103:2024..2119Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1103 2025..2119 +
1691679097.9076846-UTR-H-elongata_contig1103:2024..21191691679097.9076846-UTR-H-elongata_contig1103:2024..2119Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1103 2025..2119 +
1622929629.6198537-UTR-H-elongata_contig1103:2594..35551622929629.6198537-UTR-H-elongata_contig1103:2594..3555Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1103 2595..3555 +
1691679097.918173-UTR-H-elongata_contig1103:2594..35551691679097.918173-UTR-H-elongata_contig1103:2594..3555Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1103 2595..3555 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929629.6305864-CDS-H-elongata_contig1103:3555..41331622929629.6305864-CDS-H-elongata_contig1103:3555..4133Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1103 3556..4133 +
1691679097.9270353-CDS-H-elongata_contig1103:3555..41331691679097.9270353-CDS-H-elongata_contig1103:3555..4133Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1103 3556..4133 +
1622929629.6401541-CDS-H-elongata_contig1103:4296..47651622929629.6401541-CDS-H-elongata_contig1103:4296..4765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1103 4297..4765 +
1691679097.935908-CDS-H-elongata_contig1103:4296..47651691679097.935908-CDS-H-elongata_contig1103:4296..4765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1103 4297..4765 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1103.847.1

>prot_H-elongata_contig1103.847.1 ID=prot_H-elongata_contig1103.847.1|Name=mRNA_H-elongata_contig1103.847.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=349bp
MVLFDLLKQGAAVSTDRPGEGSATDREADASRGSDGSAQKRLKRVVVLVR
SKKGVSASHRLASIRDSPMFRPLRESGAWIDEAEEANTQSTSGAYDPGAS
RLCPSSAAFGSRRAAAAARARGAFVTVVEGELGKEGVGLTPEAHAMLAEA
SVTHSLHCAASVSFSDPLAKAAATNVTGALRVAALVASWPSCRTLVHVST
AFVHGGNTGTEARPLSQELPDLGGRNAERLYRSAQNAPGGYSSSGVGGRG
GPGPGKHALEAMEDLGYPNTYTFTKALGEHLLTRALRAHNRRLGRAERSE
KEMQTQKQCDAPAPGLRLRIVRPSIVGPAWVFPWPGWTGEQPSTVTGE*
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mRNA from alignment at H-elongata_contig1103:1292..4765+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1103.847.1 ID=mRNA_H-elongata_contig1103.847.1|Name=mRNA_H-elongata_contig1103.847.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3474bp|location=Sequence derived from alignment at H-elongata_contig1103:1292..4765+ (Himanthalia elongata Himel1 dioecious)
CGGAGACTTTTCGACGAGGCGGTTGTTCGAGTGAGAAACTGGACTGGTCC GGCCGTGCTGGCCTCAGATGTGAGGAAACATCGCTCGCTTCCGTTTAGGT TGCGTGCGTGATCTGGTCTAGGCTTGATGAATATCCCCTGACGGGGTCGT CTACCTCTTATCCTGCAGCAGTTTCGCAGAAGGTTTCTAACCTCTGGTAT AGTGTAGTCTAGCGTGCAGAGAATATCATACACAGCGCAACGGAGTAGCC CCACAGCCATATCGAGAAGCGAGACTCGCTATCAGACAGGGTGTAGTGGT AAAATAACCTCCAATCGAAGGCTCGCATCGATACGGATGCGCTCATGCCG CCGAGCAGAGCAATCCCACGCGCTTGTTTGGTTGTCACTTGTCGTCGTAA TCACTGAGCGGCTCACTGGTTGACGGGGCGACGAGGATCTCTGAATGCAA GCAAGCACCACGTTCGCGTCAACGCTCATCATGGGAATAGAAAAACACGA GATCCGGTACATTGCCATACCCTCGGCTGTGGTACATTGCCATACCCTCG GTATCTCTAAAGATATACTGTACATTGTCATACTGTACTTACTGCCAGTA TAATATTTGTCTTGGCGCTAACAGTAATAGACTGACTGCCATCTACCGCT ATGTGATTCCATTTATTTTTTATACTACTAATAGAGCGCTGCTCGCTACT GGTGCCCCTAATGATGGTTGTGATTTGCTTCAGCAACTCCTCCTCTACGG GCTGTACAAGCAGGCGTCCTTGGGTGACTGCAAATGTCGACGGCCTGGTC TATTCGACCTGACAGGACGAGCCAAATGGTAAGCAGTGTCCTGACAGTGA TAGTTGGATGAGTTACTCCCCGAGTCGAACGATACGGACCTGGCGTACAA ATGGAATCGCCCCCTTCCTCATCTCGAACTCTGGGACTTAATACGACCTA AGCCAAGTTGTTCGGGTTGCCGAAGACTGCTTGTTGTGTTGGTGGCCGTG CTAAGACTCAAGAGGTCAAGGCTAAGGCCTCTACGACGTCCCGAGACCAG CCTTAAAATCACTTTGAGATATCGTAAGAGAAGTGAAGAGTTGAGTCCAG TCGAGTCGAGTCCTCTTCACCGGACATAGGTAATGGCGATCGCGATTCAG CAAAGCCATCTTAGCTACCTATCCAGAAAATATCGCTCTCTACCCAGCTG TTGAGCTCCTGCGACGACTTCATCTGGCCGCCGCTGCGTTCCCTGCTGTG CTGCGCCCGCACTTGCGTACGACCATATCCACGAAAACCATGGAACCGCG CAGGGCATCTTGGAAGTCGTGCGAAGGGCTCGACCCTTCGGATGCTATGC GGCGTTACGCGGAGGTTGCTCGTTCCGCGTGTCCAAGGAATACGACGTCG ACCACGCCAGAGAGCTTCGTCTCAAGATCCATTAAAACCGCTCCGTCGAA GCACTCGCGCGCAGAAAACCGTGATACCACCACAGCCGGCAGCAACGAGG GCGCCGATGCTGATCACGAGGCTCCCGTTGGCAATCGCGTGCGCTCACGT GCCCCATCTCATTTGGTTGGGTTACGCGGTGGGGAAGAACCTTCGGGGAA CGATTACTGCGGCAGCGCAGAAAGCGAGGGTCGTCCTCGAGACCGATACC CCGGTCCAGAACATTCTTGGAAATTTTCGGGGGGGTCGCGAGATGTTTGG GACGGCCGGCGCAATCTCGGGCTCGTGGCGACGGTTGCGGTTGCGGTGGG GCTAGGACTGGGACTGTCGGCGGCGATCGGCGCGTCGGCACGGCGGGGAG GCGCATCAAGAGGTGGAATTGGTATTGGTCAGCGAATAGAAGAAGCATTA CTGATTTTATGTGGTTTCTTGACGTGCGAAGGTTTCTGCCTCGCCCTGCT CGTGGGATGCGCGATGCTTGCGGCGGGAGGAGCTTTGTGGTGCGCTGCAC GCCTTGCCCGTTAGCGCGAGGAGATATTCGCGTGGAGCCCCATCGCACCA GAGGCGTTGGCTCGTGCGTCGGCCAGTGCGTCGGCCCGCCGTGGCGCGAG TGGTGCTTTCTCGAAGGGTGAGACTCCGGGGAGTATCTCCGGTATCTGTC GGAACGTGCGCGGATCGGCGCAACCCATTGAGTGCGGGGATGATCCGGTG GGAGCCATTTTCAGGCCTGGGACCGAGGTACATCGTGCTTTCTGCGCTCC GACGGCGTCTTCAAGTGATGGTGCTGTTGTGTTCTTGACTGGGGTCACGG GCCTCGTCGGGCGGATGGTGCTCTTCGACCTCCTGAAGCAAGGCGCTGCG GTTTCCACCGATCGACCTGGTGAAGGGAGCGCGACGGATAGAGAGGCCGA CGCTTCCCGTGGGAGCGACGGATCGGCGCAGAAGAGGCTGAAAAGGGTTG TGGTACTCGTGAGATCCAAGAAGGGGGTGTCTGCGTCACACAGACTAGCC TCAATCAGAGACAGCCCCATGTTCCGTCCCCTGCGAGAGAGTGGGGCTTG GATAGATGAGGCGGAAGAAGCCAACACCCAGTCAACGAGCGGTGCCTATG ACCCGGGAGCTTCACGACTTTGCCCTTCCTCCGCAGCCTTCGGTTCCCGG AGGGCTGCAGCAGCGGCAAGAGCGAGAGGAGCGTTCGTTACTGTTGTCGA GGGCGAGCTGGGGAAAGAGGGGGTGGGGTTGACTCCAGAGGCGCACGCTA TGCTAGCCGAGGCGAGTGTGACGCACTCCCTTCACTGCGCAGCTAGCGTA AGCTTCAGCGACCCTCTGGCGAAGGCGGCAGCGACGAACGTGACCGGTGC GCTCCGAGTGGCCGCCCTCGTTGCTTCCTGGCCGTCCTGTAGGTGAGGAT GACTGCGATTTCTCGTACTGTTGAATTTATTCAAATGATCAGACCCAAGT CAAGCGCGACGGTGGTGGGCATATTGTTGTGCTCGTATGATGCTGTTTCT GCTCATGCTTCTCCCGCAACCACATCACCCCTTCGGTATCATTTATGTAA TCCAGGACCTTGGTGCACGTGTCCACTGCCTTCGTCCACGGCGGGAACAC GGGGACAGAAGCACGCCCCCTTTCACAAGAACTCCCTGATCTGGGCGGGA GAAACGCCGAGCGCCTGTACCGCAGCGCGCAGAACGCTCCCGGTGGCTAT TCTAGCTCGGGTGTTGGTGGGCGCGGAGGACCGGGTCCGGGGAAACATGC CCTTGAGGCGATGGAAGATCTGGGCTACCCCAACACGTACACATTCACAA AAGCCCTGGGAGAGCATCTCTTGACGAGGGCCCTGCGCGCGCACAATCGA AGATTGGGAAGGGCCGAAAGGAGCGAAAAGGAAATGCAGACCCAAAAGCA GTGTGACGCGCCGGCGCCTGGTCTGAGGTTGAGAATTGTGCGACCAAGCA TTGTTGGTCCGGCCTGGGTGTTCCCGTGGCCTGGTTGGACCGGAGAACAG CCCTCGACAGTAACAGGCGAGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig1103:1292..4765+

>mRNA_H-elongata_contig1103.847.1 ID=mRNA_H-elongata_contig1103.847.1|Name=mRNA_H-elongata_contig1103.847.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2094bp|location=Sequence derived from alignment at H-elongata_contig1103:1292..4765+ (Himanthalia elongata Himel1 dioecious)
ATGGTGCTCTTCGACCTCCTGAAGCAAGGCGCTGCGGTTTCCACCGATCG
ACCTGGTGAAGGGAGCGCGACGGATAGAGAGGCCGACGCTTCCCGTGGGA
GCGACGGATCGGCGCAGAAGAGGCTGAAAAGGGTTGTGGTACTCGTGAGA
TCCAAGAAGGGGGTGTCTGCGTCACACAGACTAGCCTCAATCAGAGACAG
CCCCATGTTCCGTCCCCTGCGAGAGAGTGGGGCTTGGATAGATGAGGCGG
AAGAAGCCAACACCCAGTCAACGAGCGGTGCCTATGACCCGGGAGCTTCA
CGACTTTGCCCTTCCTCCGCAGCCTTCGGTTCCCGGAGGGCTGCAGCAGC
GGCAAGAGCGAGAGGAGCGTTCGTTACTGTTGTCGAGGGCGAGCTGGGGA
AAGAGGGGGTGGGGTTGACTCCAGAGGCGCACGCTATGCTAGCCGAGGCG
AGTGTGACGCACTCCCTTCACTGCGCAGCTAGCGTAAGCTTCAGCGACCC
TCTGGCGAAGGCGGCAGCGACGAACGTGACCGGTGCGCTCCGAGTGGCCG
CCCTCGTTGCTTCCTGGCCGTCCTGTAGATGGTGCTCTTCGACCTCCTGA
AGCAAGGCGCTGCGGTTTCCACCGATCGACCTGGTGAAGGGAGCGCGACG
GATAGAGAGGCCGACGCTTCCCGTGGGAGCGACGGATCGGCGCAGAAGAG
GCTGAAAAGGGTTGTGGTACTCGTGAGATCCAAGAAGGGGGTGTCTGCGT
CACACAGACTAGCCTCAATCAGAGACAGCCCCATGTTCCGTCCCCTGCGA
GAGAGTGGGGCTTGGATAGATGAGGCGGAAGAAGCCAACACCCAGTCAAC
GAGCGGTGCCTATGACCCGGGAGCTTCACGACTTTGCCCTTCCTCCGCAG
CCTTCGGTTCCCGGAGGGCTGCAGCAGCGGCAAGAGCGAGAGGAGCGTTC
GTTACTGTTGTCGAGGGCGAGCTGGGGAAAGAGGGGGTGGGGTTGACTCC
AGAGGCGCACGCTATGCTAGCCGAGGCGAGTGTGACGCACTCCCTTCACT
GCGCAGCTAGCGTAAGCTTCAGCGACCCTCTGGCGAAGGCGGCAGCGACG
AACGTGACCGGTGCGCTCCGAGTGGCCGCCCTCGTTGCTTCCTGGCCGTC
CTGTAGGACCTTGGTGCACGTGTCCACTGCCTTCGTCCACGGCGGGAACA
CGGGGACAGAAGCACGCCCCCTTTCACAAGAACTCCCTGATCTGGGCGGG
AGAAACGCCGAGCGCCTGTACCGCAGCGCGCAGAACGCTCCCGGTGGCTA
TTCTAGCTCGGGTGTTGGTGGGCGCGGAGGACCGGGTCCGGGGAAACATG
CCCTTGAGGCGATGGAAGATCTGGGCTACCCCAACACGTACACATTCACA
AAAGCCCTGGGAGAGCATCTCTTGACGAGGGCCCTGCGCGCGCACAATCG
AAGATTGGGAAGGGCCGAAAGGAGCGAAAAGGAAATGCAGACCCAAAAGC
AGTGTGACGCGCCGGCGCCTGGTCTGAGGTTGAGAATTGTGCGACCAAGC
ATTGTTGGTCCGGCCTGGGTGTTCCCGTGGCCTGGTTGGACCGGAGAACA
GCCCTCGACAGTAACAGGCGAGTGAGACCTTGGTGCACGTGTCCACTGCC
TTCGTCCACGGCGGGAACACGGGGACAGAAGCACGCCCCCTTTCACAAGA
ACTCCCTGATCTGGGCGGGAGAAACGCCGAGCGCCTGTACCGCAGCGCGC
AGAACGCTCCCGGTGGCTATTCTAGCTCGGGTGTTGGTGGGCGCGGAGGA
CCGGGTCCGGGGAAACATGCCCTTGAGGCGATGGAAGATCTGGGCTACCC
CAACACGTACACATTCACAAAAGCCCTGGGAGAGCATCTCTTGACGAGGG
CCCTGCGCGCGCACAATCGAAGATTGGGAAGGGCCGAAAGGAGCGAAAAG
GAAATGCAGACCCAAAAGCAGTGTGACGCGCCGGCGCCTGGTCTGAGGTT
GAGAATTGTGCGACCAAGCATTGTTGGTCCGGCCTGGGTGTTCCCGTGGC
CTGGTTGGACCGGAGAACAGCCCTCGACAGTAACAGGCGAGTGA
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