mRNA_H-elongata_contig110177.833.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig110177.833.1 vs. uniprot
Match: D8LSB2_ECTSI (Sacchrp_dh_NADP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSB2_ECTSI) HSP 1 Score: 140 bits (354), Expect = 2.820e-38 Identity = 62/89 (69.66%), Postives = 76/89 (85.39%), Query Frame = 1
Query: 1 TLPTIIADSMDQESLDRMVAQAKVILTTVGPYNRYGNKLVETCAREGVHLCDLAGESTWVREMIDKHHDQADRTGAKIVPSCGFDSIPA 267
TLPTI+ADS+D E++ MV+QAKVI+TTVGPY YG+K+V C+ GVH CDL GES WV+ +IDKHH++A+RTGAKIVPSCGFDSIPA
Sbjct: 67 TLPTIVADSLDDEAVGGMVSQAKVIITTVGPYAHYGSKVVAACSAAGVHCCDLTGESLWVKGLIDKHHEEAERTGAKIVPSCGFDSIPA 155
BLAST of mRNA_H-elongata_contig110177.833.1 vs. uniprot
Match: A0A836CMB4_9STRA (Sacchrp_dh_NADP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB4_9STRA) HSP 1 Score: 122 bits (307), Expect = 2.780e-31 Identity = 58/88 (65.91%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 4 LPTIIADSMDQESLDRMVAQAKVILTTVGPYNRYGNKLVETCAREGVHLCDLAGESTWVREMIDKHHDQADRTGAKIVPSCGFDSIPA 267
LP +IADS D+ SL+ M QA V++TTVGPY +YG LVE CAR G HLCDL GES WV E+I+K A TGAKIVPSCGFDSIPA
Sbjct: 73 LPHLIADSHDEASLEAMSGQADVVITTVGPYLKYGTILVEACARAGTHLCDLTGESLWVEEIIEKFDKVAQSTGAKIVPSCGFDSIPA 160
BLAST of mRNA_H-elongata_contig110177.833.1 vs. uniprot
Match: A0A2D5LG04_9GAMM (Saccharopine dehydrogenase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D5LG04_9GAMM) HSP 1 Score: 117 bits (292), Expect = 8.590e-31 Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 4 LPTIIADSMDQESLDRMVAQAKVILTTVGPYNRYGNKLVETCAREGVHLCDLAGESTWVREMIDKHHDQADRTGAKIVPSCGFDSIPA 267
+P + ADS D +SL+++V Q KVILTTVGPY RYG++LV CA+ G H CDL GES W+REMI H A +GA+IV +CGFDSIP+
Sbjct: 60 IPVLTADSHDSDSLEKLVQQTKVILTTVGPYARYGSELVAACAQHGTHYCDLTGESLWMREMITAHQQTARDSGARIVHTCGFDSIPS 147
BLAST of mRNA_H-elongata_contig110177.833.1 vs. uniprot
Match: A0A349X1N5_9GAMM (Saccharopine dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349X1N5_9GAMM) HSP 1 Score: 120 bits (300), Expect = 1.800e-30 Identity = 55/89 (61.80%), Postives = 68/89 (76.40%), Query Frame = 1
Query: 1 TLPTIIADSMDQESLDRMVAQAKVILTTVGPYNRYGNKLVETCAREGVHLCDLAGESTWVREMIDKHHDQADRTGAKIVPSCGFDSIPA 267
T+P I+ADS D +SL + +A I+TTVGPY YG+KLV+ CA EG H DLAGE+ W+REMID HH+ A +TGAKIV SCGFDSIP+
Sbjct: 59 TVPCILADSDDLDSLRALAKKATSIITTVGPYAYYGSKLVQACAEEGTHYVDLAGETPWMREMIDAHHETAQKTGAKIVHSCGFDSIPS 147
BLAST of mRNA_H-elongata_contig110177.833.1 vs. uniprot
Match: A0A848LMI0_9DELT (Saccharopine dehydrogenase n=1 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LMI0_9DELT) HSP 1 Score: 118 bits (296), Expect = 8.610e-30 Identity = 54/88 (61.36%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 4 LPTIIADSMDQESLDRMVAQAKVILTTVGPYNRYGNKLVETCAREGVHLCDLAGESTWVREMIDKHHDQADRTGAKIVPSCGFDSIPA 267
LP + AD+ D SLD +VA+ KV+ TTVGPY RYG++LV CAR G CDL GE W+R MID HHDQA TGA+IV +CGFDSIP+
Sbjct: 65 LPLLKADAKDAASLDALVARTKVVCTTVGPYARYGSELVAACARAGTDYCDLTGEVQWMRRMIDAHHDQARATGARIVHTCGFDSIPS 152
BLAST of mRNA_H-elongata_contig110177.833.1 vs. uniprot
Match: A0A2D6V8P4_9GAMM (Saccharopine dehydrogenase n=4 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D6V8P4_9GAMM) HSP 1 Score: 118 bits (295), Expect = 9.530e-30 Identity = 52/88 (59.09%), Postives = 67/88 (76.14%), Query Frame = 1
Query: 4 LPTIIADSMDQESLDRMVAQAKVILTTVGPYNRYGNKLVETCAREGVHLCDLAGESTWVREMIDKHHDQADRTGAKIVPSCGFDSIPA 267
+P + ADS D +SL+++V QA+VILTTVGPY RYG++LV CA+ G H CDL GES W+REMI H A +GA+IV +CGFDSIP+
Sbjct: 60 IPVLTADSHDSDSLEKLVQQARVILTTVGPYARYGSELVAACAQHGTHYCDLTGESLWMREMITAHQQTAQDSGARIVHTCGFDSIPS 147
BLAST of mRNA_H-elongata_contig110177.833.1 vs. uniprot
Match: A0A2E6E9Z9_9GAMM (Saccharopine dehydrogenase n=1 Tax=Woeseia sp. TaxID=1980636 RepID=A0A2E6E9Z9_9GAMM) HSP 1 Score: 118 bits (295), Expect = 1.050e-29 Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = 1
Query: 13 IIADSMDQESLDRMVAQAKVILTTVGPYNRYGNKLVETCAREGVHLCDLAGESTWVREMIDKHHDQADRTGAKIVPSCGFDSIPA 267
IIADS D+ +LD M A+ KVIL+TVGPY +YG+ LVE+C + G CDL GES W+R MIDKH D A ++GA+IV SCGFDSIP+
Sbjct: 70 IIADSHDRATLDLMTARTKVILSTVGPYAKYGSDLVESCIKNGTDYCDLTGESQWIRRMIDKHEDDAKKSGARIVMSCGFDSIPS 154
BLAST of mRNA_H-elongata_contig110177.833.1 vs. uniprot
Match: A0A3A8J8B6_9DELT (Saccharopine dehydrogenase n=5 Tax=Myxococcaceae TaxID=31 RepID=A0A3A8J8B6_9DELT) HSP 1 Score: 118 bits (295), Expect = 1.140e-29 Identity = 52/89 (58.43%), Postives = 68/89 (76.40%), Query Frame = 1
Query: 1 TLPTIIADSMDQESLDRMVAQAKVILTTVGPYNRYGNKLVETCAREGVHLCDLAGESTWVREMIDKHHDQADRTGAKIVPSCGFDSIPA 267
+LP +IAD+ D SLD +VA+ +V+++TVGPYNRYG++LV CAR G CDL GE W+R+MID H QA TGA+IV +CGFDSIP+
Sbjct: 65 SLPVVIADAKDAASLDALVARTRVVISTVGPYNRYGSELVAACARAGTDYCDLTGEVHWMRKMIDAHDTQARETGARIVHTCGFDSIPS 153
BLAST of mRNA_H-elongata_contig110177.833.1 vs. uniprot
Match: A0A293NBL8_9GAMM (Saccharopine dehydrogenase n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A293NBL8_9GAMM) HSP 1 Score: 117 bits (294), Expect = 1.530e-29 Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 4 LPTIIADSMDQESLDRMVAQAKVILTTVGPYNRYGNKLVETCAREGVHLCDLAGESTWVREMIDKHHDQADRTGAKIVPSCGFDSIPA 267
+P + ADS D+ES+ +V QA+VILTTVGPY RYG+ LV CA+ G H CDL GE W+REMI H ++A TGA+IV +CGFDSIP+
Sbjct: 55 IPVLTADSGDEESISALVQQARVILTTVGPYARYGSSLVAACAKHGTHYCDLTGEVHWMREMITAHQEEAKSTGARIVHTCGFDSIPS 142
BLAST of mRNA_H-elongata_contig110177.833.1 vs. uniprot
Match: UPI0019D6C833 (saccharopine dehydrogenase NADP-binding domain-containing protein n=2 Tax=Pyxidicoccus TaxID=224458 RepID=UPI0019D6C833) HSP 1 Score: 117 bits (293), Expect = 2.220e-29 Identity = 51/88 (57.95%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 4 LPTIIADSMDQESLDRMVAQAKVILTTVGPYNRYGNKLVETCAREGVHLCDLAGESTWVREMIDKHHDQADRTGAKIVPSCGFDSIPA 267
LP ++AD+ D SLD +V + +V+ TTVGPY +YGN+LV CAR G CDL GE W+R MID HH+QA TGA+IV +CGFDSIP+
Sbjct: 65 LPLLVADAKDPASLDALVTRTRVVCTTVGPYAKYGNELVAACARAGTDYCDLTGEVQWMRRMIDAHHEQARATGARIVHTCGFDSIPS 152 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110177.833.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig110177.833.1 >prot_H-elongata_contig110177.833.1 ID=prot_H-elongata_contig110177.833.1|Name=mRNA_H-elongata_contig110177.833.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp MDQESLDRMVAQAKVILTTVGPYNRYGNKLVETCAREGVHLCDLAGESTWback to top mRNA from alignment at H-elongata_contig110177:217..1397- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig110177.833.1 ID=mRNA_H-elongata_contig110177.833.1|Name=mRNA_H-elongata_contig110177.833.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1181bp|location=Sequence derived from alignment at H-elongata_contig110177:217..1397- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig110177:217..1397- >mRNA_H-elongata_contig110177.833.1 ID=mRNA_H-elongata_contig110177.833.1|Name=mRNA_H-elongata_contig110177.833.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=480bp|location=Sequence derived from alignment at H-elongata_contig110177:217..1397- (Himanthalia elongata Himel1 dioecious)back to top |