mRNA_H-elongata_contig110020.817.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig110020.817.1 vs. uniprot
Match: D8LCW7_ECTSI (Zinc transporter zupT, Zinc transporter ZIP, metal ion transmembrane transporter activity n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCW7_ECTSI) HSP 1 Score: 314 bits (805), Expect = 1.080e-101 Identity = 209/361 (57.89%), Postives = 241/361 (66.76%), Query Frame = 1
Query: 1 KADAYLYATLSLFGGILFYKGLDYGVHLLEGND-GGHNIDIDLYDLDESSSGGGITVA----------KRNKAA----GVDGADPSSEAMAPHGMVPKHDVVVELSS-GSNLRPSADLHTMHLRVAGKVQPPQQXXXXXXGHVHQEGEELASASLTPKNKSTT------GMDLSAIEEAEGGGR-------GGVDEGDANAEAV----DKQLVRMGLMTALAIGIHNFPEGLATFVAALSDPSVGAALXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDSMNELVYGILFGVVAGMMINISIHELIPTAVRYDPADKVTTNSIIVGMAIMAASLTLFLY 984
+AD+YLYATLSLFGG+L YKG+D VHLLEG H++DI LYDLD SS + KR K+A G + + ++ P H+VVVEL+S GS +RPS DL+T+ L +AGKVQ Q E S NK+ G + +EEA G + + AV +++LVRMGL+TA+AIGIHNFPEGLATFVAALSDPSV XXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKD M+ELVYG+LFGVVAGMM+NI+IHELIPTAVRYDP DKVTTNSII GMAIMA SLTLFLY
Sbjct: 80 EADSYLYATLSLFGGVLLYKGIDLVVHLLEGGPVRDHHVDISLYDLDGSSGSSESSPRTAPAATADKKKRKKSAPQLGGANSGNNPNDGREP--FPADHNVVVELASRGSAVRPSPDLNTLQLSMAGKVQAQQPSPV---------SELTPSGGGNSNNKTGVVGFMEEGSGVDQMEEAPSAXXXXXXXAPSGTVQSERGTPAVADGDNEKLVRMGLLTAVAIGIHNFPEGLATFVAALSDPSVXXXXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDIMSELVYGLLFGVVAGMMVNITIHELIPTAVRYDPTDKVTTNSIIAGMAIMALSLTLFLY 429
BLAST of mRNA_H-elongata_contig110020.817.1 vs. uniprot
Match: A0A6V2QEW8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QEW8_HETAK) HSP 1 Score: 218 bits (554), Expect = 7.250e-65 Identity = 155/334 (46.41%), Postives = 193/334 (57.78%), Query Frame = 1
Query: 4 ADAYLYATLSLFGGILFYKGLDYGVHLLEGNDGGHNIDI-------DLYDLDESSSGGGITVAKRNKAAGVDGADPSSEAMAPHGMVPKHDVVVELSSGSNLRPSADLHTMHLRVAGKVQPPQQXXXXXXGHVHQEGEELASASLTPKNKSTTGMDLSAIEEAEGGGRGGVDEGDANAEAVDKQLVRMGLMTALAIGIHNFPEGLATFVAALSDPSVGAALXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDSMNELVYGILFGVVAGMMINISIHELIPTAVRYDPADKVTTNSIIVGMAIMAASLTLFLY 984
++AYLYA+LS FGGI F K LD VH L D H+ D+ D+++S + TV K +K + A P + S DL T++L AGK G G+ LT S T +D A +G + E D +LVRMG++TALAIG+HNFPEGLATFVA L DPSVG ALXXXXXXXXXXXXXCVAIP+YYATG+R KAFGWAL+SG+SEPIGAGLGWL+L ++++YG AGMM+NI +HELIPTA R+DP D + +N ++ GMAIMA SL LF Y
Sbjct: 76 SNAYLYASLSFFGGIAFGKTLDVLVHKL---DKSHSHDLPDRPEEASTTDIEDSQTSYDQTVDKPSK----------TNATLPQAVT-----------------SPDLTTLNLDKAGKT-------VAGAGLGSPAGKGSRRGMLTTAG-SATSLDTEAT------------DGTHSKEPKDARLVRMGVLTALAIGLHNFPEGLATFVATLDDPSVGGALXXXXXXXXXXXXXCVAIPIYYATGSRAKAFGWALISGISEPIGAGLGWLVLSAVFSDVLYGXXXXXXAGMMVNICLHELIPTAHRHDPKDTIVSNCLVAGMAIMALSLVLFQY 359
BLAST of mRNA_H-elongata_contig110020.817.1 vs. uniprot
Match: A0A6H5JKG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG5_9PHAE) HSP 1 Score: 214 bits (545), Expect = 6.670e-64 Identity = 156/327 (47.71%), Postives = 186/327 (56.88%), Query Frame = 1
Query: 4 ADAYLYATLSLFGGILFYKGLDYGVHLLEGND-GGHNIDIDLYDLDESSSGGGITVAKRNKAAGVDGADPSSEAMAPHGMVPKHDVVVELSSGSNLRPSADLHTMHLRVAGKVQPPQQXXXXXXGHVHQEGEELASASLTPKNKSTTGMDLSAIEEAEGGGRGGVDEGDANAEAVDK-QLVRMGLMTALAIGIHNFPEGLATFVAALSDPSVGAALXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDSMNELVYGILFGVVAGMMINISIHELIPTAVRYDPADKVTTNSIIVGMAIMAASLTLF 978
ADAYLYATLSLFGG+L Y+G+++ V LL G G HN++ D YDL+ SSS TV +SG + R S + +EG P+ + TTG ANA + D+ +LV MGL+TA+AIGIHNFP+GLATFV++L+DPSV XXXXXXXXXXXX CVA+PVYY TG+R KAFGWALLSG +EPIGA LGWLILKD M+ELVYGIL + IH+LIPTAVR+DPADKVTTNSI GMAIMA SL LF
Sbjct: 81 ADAYLYATLSLFGGMLCYRGIEFVVQLLGGGAFGEHNLEFDQYDLNNSSSN---TVT---------------------------------ASGDSSRNST--------------------------IKREGPRDVEQ---PQPQETTG--------------------GANAVSGDEAKLVHMGLLTAVAIGIHNFPDGLATFVSSLADPSVXXXXXXXXXXXXXXXXMCVAMPVYYGTGSRCKAFGWALLSGATEPIGAALGWLILKDVMSELVYGILXXXXXXXXXXVVIHDLIPTAVRFDPADKVTTNSISAGMAIMALSLVLF 322
BLAST of mRNA_H-elongata_contig110020.817.1 vs. uniprot
Match: A0A8J2SXP3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXP3_9STRA) HSP 1 Score: 204 bits (520), Expect = 3.010e-60 Identity = 113/153 (73.86%), Postives = 133/153 (86.93%), Query Frame = 1
Query: 526 DKQLVRMGLMTALAIGIHNFPEGLATFVAALSDPSVGAALXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDSMNELVYGILFGVVAGMMINISIHELIPTAVRYDPADKVTTNSIIVGMAIMAASLTLFLY 984
DK+L MG+MTALAIGIHNFPEGLATFVA L DP+VGA+ XXXXXXXXXXXXXCV+IP+Y+ATG+RWKAF WALLSGVSE +GA LGW +LKD + L+YGI+FG+VAGMMI I ++ELIPTA RYDP D+V T SI+ GMA+MAASL LF+Y
Sbjct: 168 DKRLESMGMMTALAIGIHNFPEGLATFVATLDDPAVGASXXXXXXXXXXXXXXCVSIPIYFATGDRWKAFRWALLSGVSEIVGALLGWALLKDHFDNLLYGIVFGMVAGMMIMICLNELIPTAHRYDPRDRVVTKSIVAGMAVMAASLCLFVY 320
BLAST of mRNA_H-elongata_contig110020.817.1 vs. uniprot
Match: A0A6U3SFV9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SFV9_9STRA) HSP 1 Score: 206 bits (523), Expect = 5.730e-60 Identity = 149/341 (43.70%), Postives = 200/341 (58.65%), Query Frame = 1
Query: 1 KADAYLYATLSLFGGILFYKGLDYGVHLLEGNDGGHN---IDIDLYDLDESSSGGGITVAKRNKAAGVDGADPSSEAMAPHGMVPKHDVVVELSSGSNLRPSADLHTMHLRVAGKVQPPQQXXXXXXGHVHQEGEELASASLTPKNKSTTGMDLSAIEEAEGGGRGGVDEGDANAE-AVD-----------KQLVRMGLMTALAIGIHNFPEGLATFVAALSDPSVGAALXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDSMNELVYGILFGVVAGMMINISIHELIPTAVRYDPADKVTTNSIIVGMAIMAASLTLF 978
+ DA++YATL FGG++ +D+ V L G HN ++ DL ++ A++N G++ A + APH + G + P +L H + +V+ H++ + +AS TP +++ G D ++ A+ G DE D + AVD K+LV+MG+ TA+AIG+HNFPEGLATFVAAL DP VG LXXXXXXXXXXXXXCVA+P+YYATGNR KAFGWAL+SG+SEP+ A LGW IL +S ++ +Y +LFG+V GMM+ IS EL+PTA RYDP D V T S I GM IMA SL LF
Sbjct: 77 EEDAHIYATLCFFGGVIIMLLIDFLVRLFSGEHHNHNHPSSNVPQQDLSKAE-------AEKN---GLEDASEEEQFAAPHCV------------GCSDDPVGELREWHEKAEAEVRD------------HKQNQTVASVE-TPGDQNAAG-DAGSLS-ADSASDGFKDEIDGRTKLAVDGFKGLESSHEHKKLVKMGISTAIAIGLHNFPEGLATFVAALDDPRVGGVLXXXXXXXXXXXXXCVALPIYYATGNRTKAFGWALISGLSEPLAALLGWAILANSFSDTLYAVLFGIVGGMMVIISCKELLPTAHRYDPEDTVVTYSFIGGMVIMALSLVLF 380
BLAST of mRNA_H-elongata_contig110020.817.1 vs. uniprot
Match: F0Y6B2_AURAN (Cilia- and flagella-associated protein 206 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6B2_AURAN) HSP 1 Score: 213 bits (542), Expect = 1.340e-58 Identity = 120/160 (75.00%), Postives = 136/160 (85.00%), Query Frame = 1
Query: 499 EGDANAEAVDKQLVRMGLMTALAIGIHNFPEGLATFVAALSDPSVGAALXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDSMNELVYGILFGVVAGMMINISIHELIPTAVRYDPADKVTTNSIIVGMAIMAASLTLF 978
E +A A DK L RMG+MTALAIGIHNFPEGLATFVA L DP+VG ALXXXXXXXXXXXXXCV+IP+Y+ATG+RWKAF WALLSGVSEP+GA LGWL+LKD NEL+YGI+FG+VAGMM+ I ++ELIPTA RYDP DKV T SI GM +MAASL LF
Sbjct: 184 EVEAPEAAGDKPLERMGVMTALAIGIHNFPEGLATFVATLDDPAVGGALXXXXXXXXXXXXXCVSIPIYFATGDRWKAFRWALLSGVSEPVGALLGWLLLKDHFNELLYGIVFGMVAGMMVMICLNELIPTAHRYDPQDKVVTKSITAGMVVMAASLCLF 343
BLAST of mRNA_H-elongata_contig110020.817.1 vs. uniprot
Match: B7G5W7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5W7_PHATC) HSP 1 Score: 202 bits (514), Expect = 1.540e-58 Identity = 152/326 (46.63%), Postives = 189/326 (57.98%), Query Frame = 1
Query: 10 AYLYATLSLFGGILFYKGLDYGVHLLEGNDGGHNIDIDLYDLDESSSGGGITVAKRNKAAGVDGADPSSEAMAPHGMVPKHDVVVELSSGSNLRPSADLHTMHLRVAGKVQPPQQXXXXXXGHVHQEGEELASASLTPKNKSTTGMDLSAIEEAEGGGRGGVDEGDANAEAVD--KQLVRMGLMTALAIGIHNFPEGLATFVAALSDPSVGAALXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDSMNELVYGILFGVVAGMMINISIHELIPTAVRYDPADKVTTNSIIVGMAIMAASLTLFL 981
AY+YATL FGG++ L+Y V L G D + D + AK + VD DPS APH P D + P+ D + +A +++ ++ G +H E + A + T + ++ G DA AE D K+L+RM L TALAIGIHNFPEGLATFVAAL DP VGA L XXXXXXXXXXXXCVA+PVYYATGNRWKAFGWA+LSG+SEP+ A LGW +L S ++ +YG+LFG+VAGMM+ IS EL+PTA RYDP D V T + I GM IMA SL LFL
Sbjct: 85 AYIYATLCFFGGVVLMVALNYMVTWLLGXXXXXXXXXD-FPKDHITH-----AAKTQEITNVD--DPS----APH---PADDNAPLACPCCSDDPAGDWQAVQ-DMASEIEAVEKDHKVWDG-IH-EPDSRARPDSADSSPHATPFSATTHHASD---YGDDSSHDALAEPTDESKKLLRMSLNTALAIGIHNFPEGLATFVAALGDPKVGAVLAXXXXXXXXXXXXCVAMPVYYATGNRWKAFGWAMLSGMSEPVAALLGWAVLASSFSDTLYGLLFGMVAGMMVVISTRELLPTAHRYDPEDCVVTYAFISGMCIMALSLVLFL 389
BLAST of mRNA_H-elongata_contig110020.817.1 vs. uniprot
Match: A0A7S3VFQ6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VFQ6_9STRA) HSP 1 Score: 200 bits (509), Expect = 2.660e-58 Identity = 145/330 (43.94%), Postives = 188/330 (56.97%), Query Frame = 1
Query: 10 AYLYATLSLFGGILFYKGLDYGVHLLEGNDG---GHNIDIDLYDLDESSSGGGITVAKRNKAAGVDGADPSSEAMAPHGM--VPKHDVVVELSSGSNLRPSADLHTMHLRVAGKVQPPQQXXXXXXGHVHQEGEELASASLTPKNKSTTGMDLSAIEEAEGGGRGG--VDEGDANAEAVDKQLVRMGLMTALAIGIHNFPEGLATFVAALSDPSVGAALXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDSMNELVYGILFGVVAGMMINISIHELIPTAVRYDPADKVTTNSIIVGMAIMAASLTLF 978
A LYATLS F GIL +D V+L+ G GH + + NK D S+E +PHG K +VV+ NL P+ DL + + + + + G L AS +D + E G + DE E +K+LVRMG+ TA+AI +HNFPEGLATFVA L DP +GA LXXXXXXXXXXXX CVA+P+YYATGNR KAF W LSG+SEP+GA LGWL+L +S ++ +YG++FG+VAGMM+ IS+ EL+PTA RYDP D V TNSII GMA+++ SL L+
Sbjct: 46 ANLYATLSFFLGILCMVVIDKVVNLISSKHGDVHGHGPE-----------------SLNNK-------DNSNEIESPHGHGEEEKEEVVIPPCFTCNLDPAGDLKEWQEKA--EAEEVRNKTLEGGSTLAGNGASLVGASDNGSENVPAPIDEERVVEVSGVPKVASMTDE-----EIENKKLVRMGMQTAVAIALHNFPEGLATFVAVLEDPKIGAILXXXXXXXXXXXXFCVALPIYYATGNRKKAFWWGALSGMSEPVGALLGWLVLANSFSDAIYGLMFGLVAGMMVMISLKELLPTAYRYDPGDTVVTNSIIAGMAVISLSLVLY 344
BLAST of mRNA_H-elongata_contig110020.817.1 vs. uniprot
Match: A0A7S2RNM0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RNM0_9STRA) HSP 1 Score: 200 bits (508), Expect = 7.320e-58 Identity = 108/150 (72.00%), Postives = 126/150 (84.00%), Query Frame = 1
Query: 529 KQLVRMGLMTALAIGIHNFPEGLATFVAALSDPSVGAALXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDSMNELVYGILFGVVAGMMINISIHELIPTAVRYDPADKVTTNSIIVGMAIMAASLTLF 978
++LVRMGLMTALAIGIHN PEGLATFV L DP+VG LXXXXXXXXXXXXXCVAIP+YYAT +RW+AF WA +SG+SEPIGAGLGW +L +++ VYGI+FG+V GMM+NI IHEL+PTA RYDP D+ TT S I GMA+MA SL LF
Sbjct: 219 QRLVRMGLMTALAIGIHNLPEGLATFVGTLDDPAVGVGLXXXXXXXXXXXXXCVAIPIYYATHDRWQAFKWAFISGISEPIGAGLGWAVLHSIIDDRVYGIVFGLVGGMMVNICIHELLPTAFRYDPGDRFTTKSFIAGMALMALSLILF 368
BLAST of mRNA_H-elongata_contig110020.817.1 vs. uniprot
Match: A0A7S2BFN7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BFN7_9STRA) HSP 1 Score: 198 bits (503), Expect = 5.400e-57 Identity = 118/203 (58.13%), Postives = 149/203 (73.40%), Query Frame = 1
Query: 394 EELASASLTPKNK------STTGMDLSAIEEAEGGGRGGVDEGDANAEAVDKQ--LVRMGLMTALAIGIHNFPEGLATFVAALSDPSVGAALXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDSMNELVYGILFGVVAGMMINISIHELIPTAVRYDPADKVTTNSIIVGMAIMAASLTLF 978
EE+A A PK+ ST+G S+ + G+ G + A+ D+Q LV+MG+MTALAIG+HNFPEGLATFV L DP+VG XXXXXXXXXXXXXCV+IP+YYAT NRW+AF WA +SG+SEPIGA LGW+ L + M++ Y ++FG+V+GMM+NI IHELIPTAV+YDP DKVT+ S+I GM +MA SL LF
Sbjct: 182 EEVAEAGGAPKDAGSAITVSTSGSPNSS----DLSGKEGALPMEVGAKDDDRQKALVKMGMMTALAIGLHNFPEGLATFVGTLDDPTVGXXXXXXXXXXXXXXXXCVSIPIYYATKNRWQAFKWAFISGISEPIGAALGWIFLANCMSDSAYAVIFGLVSGMMVNICIHELIPTAVKYDPEDKVTSKSVIAGMLVMALSLVLF 380 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110020.817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig110020.817.1 >prot_H-elongata_contig110020.817.1 ID=prot_H-elongata_contig110020.817.1|Name=mRNA_H-elongata_contig110020.817.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=329bp KADAYLYATLSLFGGILFYKGLDYGVHLLEGNDGGHNIDIDLYDLDESSSback to top mRNA from alignment at H-elongata_contig110020:651..1637+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig110020.817.1 ID=mRNA_H-elongata_contig110020.817.1|Name=mRNA_H-elongata_contig110020.817.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=987bp|location=Sequence derived from alignment at H-elongata_contig110020:651..1637+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig110020:651..1637+ >mRNA_H-elongata_contig110020.817.1 ID=mRNA_H-elongata_contig110020.817.1|Name=mRNA_H-elongata_contig110020.817.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1974bp|location=Sequence derived from alignment at H-elongata_contig110020:651..1637+ (Himanthalia elongata Himel1 dioecious)back to top |