mRNA_H-elongata_contig109963.807.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig109963.807.1
Unique NamemRNA_H-elongata_contig109963.807.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: A0A6H5L9Y2_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Y2_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 4.120e-60
Identity = 103/133 (77.44%), Postives = 116/133 (87.22%), Query Frame = 1 
Query:    4 SLLAKAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 402
            SL+AKAEAQELMMVP+NIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDL+MNLLM + TWDGKVPAPAILKP+PLWTGKQ+F+LICPKVNL      HP  G   LN+   +VL+ EGEL+MG++DKKTV
Sbjct:  534 SLVAKAEAQELMMVPRNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLLMNLLMWVETWDGKVPAPAILKPKPLWTGKQLFSLICPKVNLETSANGHPK-GANPLNNSDTKVLIHEGELMMGNIDKKTV 665
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BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8LRY3_ECTSI (DNA-directed RNA polymerase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY3_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 2.150e-55
Identity = 102/141 (72.34%), Postives = 117/141 (82.98%), Query Frame = 1 
Query:    4 SLLAKAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRV--------HPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 402
            SL+AKAEAQELMMVP+NIVSPQSNKPVMGI  DSLLGVCKMTKRDTFVERDL+MNLLM + TWDGKVPAPAILKP+PLWTGKQ+F+LICPKV+ S  G+V        HP  G   LN+   +VL+ EGEL+MG++DKKTV
Sbjct:  530 SLVAKAEAQELMMVPRNIVSPQSNKPVMGI--DSLLGVCKMTKRDTFVERDLLMNLLMWVETWDGKVPAPAILKPKPLWTGKQLFSLICPKVHGSRTGKVNLETSANGHPK-GANPLNNSDTKVLIHEGELMMGNIDKKTV 667
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BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: A0A836CHC4_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC4_9STRA)

HSP 1 Score: 180 bits (456), Expect = 7.100e-50
Identity = 90/133 (67.67%), Postives = 104/133 (78.20%), Query Frame = 1 
Query:    4 SLLAKAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 402
            S++AKAE QELM VP+NIVSPQSNKPVMGIVQDSLL VCKMTKRD F+E+DL+M +LM +  W+G VPAPAI KPRPLWTGKQ+F++ICP VN       HP  G   LN    +VLV +GELIMG VDKKTV
Sbjct:  525 SVVAKAEVQELMSVPRNIVSPQSNKPVMGIVQDSLLAVCKMTKRDVFIEKDLLMCVLMVVDNWNGLVPAPAIYKPRPLWTGKQLFSVICPDVNFRTTANGHPK-GANELNASDTEVLVHQGELIMGIVDKKTV 656
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BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8UWF5_9FLOR (DNA-directed RNA polymerase (Fragment) n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=D8UWF5_9FLOR)

HSP 1 Score: 160 bits (405), Expect = 1.120e-45
Identity = 79/129 (61.24%), Postives = 95/129 (73.64%), Query Frame = 1 
Query:   16 KAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 402
            +AE QELM+VP  IVSPQ NKPVMGIVQD+LLG    T+RDTF+ERDLMMNLL+ +G WDG +P PAI KPRPLWTGKQ+F+L+ PKVNL      HP      ++    +V + +GELI G VDKKTV
Sbjct:   21 RAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDLMMNLLLHVGDWDGVIPEPAIYKPRPLWTGKQIFSLVLPKVNLIRYNLTHPDEEKTDISPGDTKVYISQGELICGIVDKKTV 149
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BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8UWF4_9FLOR (DNA-directed RNA polymerase (Fragment) n=1 Tax=Antithamnion nipponicum TaxID=179279 RepID=D8UWF4_9FLOR)

HSP 1 Score: 159 bits (403), Expect = 2.230e-45
Identity = 77/129 (59.69%), Postives = 94/129 (72.87%), Query Frame = 1 
Query:   16 KAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 402
            +AE  ELM+VP NIVSPQ NKPVMGIVQD+LLG    T+RDTF+ RDLMMN+LM +G WDG +P PAI KP PLWTGKQ+F+LI PKVNL+     HP   +  ++    +V +  GELI G VDK+TV
Sbjct:   21 RAEVMELMLVPHNIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLRRDLMMNMLMHVGDWDGVIPEPAIYKPEPLWTGKQIFSLILPKVNLTRLANPHPDGEVSDISPGDTKVYISRGELICGIVDKRTV 149
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BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8UWG6_9FLOR (DNA-directed RNA polymerase (Fragment) n=8 Tax=Rhodomelaceae TaxID=2803 RepID=D8UWG6_9FLOR)

HSP 1 Score: 157 bits (398), Expect = 1.250e-44
Identity = 77/129 (59.69%), Postives = 97/129 (75.19%), Query Frame = 1 
Query:   16 KAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 402
            +AE QELM+VP  +VSPQSNKPVMGI+QD+LLG   +T+RDTF+ERDL+MNLLM +G WDG VP PAILKP+PLWTGKQ+F+LI PKVN+S     H       ++    +V++  G L+ G VDKKTV
Sbjct:   21 RAEVQELMLVPHCVVSPQSNKPVMGIIQDTLLGCMLLTQRDTFIERDLVMNLLMHVGGWDGVVPQPAILKPQPLWTGKQIFSLILPKVNISRTNITHGDADDSPMSVSDTKVVISSGILLCGIVDKKTV 149
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BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8UWG1_9FLOR (DNA-directed RNA polymerase (Fragment) n=1 Tax=Marionella schmitziana TaxID=756402 RepID=D8UWG1_9FLOR)

HSP 1 Score: 157 bits (398), Expect = 1.250e-44
Identity = 78/129 (60.47%), Postives = 94/129 (72.87%), Query Frame = 1 
Query:   16 KAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 402
            +AE QELM+VP  IVSPQSNKPVMGI+QD+LLG    T+RDTF+ERD +MN+LM +G WDG VP PAILKPRPLWTGKQ+F+LI P VNL+     HP      ++     V +  GEL+ G VDKKTV
Sbjct:   21 RAEVQELMLVPHCIVSPQSNKPVMGIIQDTLLGCMLFTQRDTFLERDFVMNMLMHVGDWDGTVPHPAILKPRPLWTGKQIFSLILPPVNLTRTNITHPDEEDTPMSPGDTLVYISNGELVCGIVDKKTV 149
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BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8UWF3_9FLOR (DNA-directed RNA polymerase (Fragment) n=1 Tax=Acrothamnion preissii TaxID=756384 RepID=D8UWF3_9FLOR)

HSP 1 Score: 157 bits (398), Expect = 1.250e-44
Identity = 77/129 (59.69%), Postives = 94/129 (72.87%), Query Frame = 1 
Query:   16 KAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 402
            +AE QELM+VP  IVSPQ NKPVMGIVQD+LLG    T+RDTF+ERDLMMN+LM +G WDG +P PAILKPRPLWTGKQ+F+LI P +NL      HP      ++    +V + +G L+ G VDKKTV
Sbjct:   21 RAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFIERDLMMNMLMHVGDWDGIIPEPAILKPRPLWTGKQIFSLILPPINLIRFNITHPDEEKTDMSPGDTKVFISKGHLVCGIVDKKTV 149
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BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8UWH2_9FLOR (DNA-directed RNA polymerase (Fragment) n=4 Tax=Ceramiaceae TaxID=31377 RepID=D8UWH2_9FLOR)

HSP 1 Score: 156 bits (395), Expect = 3.490e-44
Identity = 75/129 (58.14%), Postives = 93/129 (72.09%), Query Frame = 1 
Query:   16 KAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 402
            +AE QELM+VP  I+SPQ N PVMGI+QD+LLG    T+RDTF+ERD +MNLLM +G WDG +P PAILKP+PLWTGKQ+F+LI P VNLS   + HP      ++    +V +  G LI G VDKKTV
Sbjct:   21 RAEVQELMLVPHCIISPQGNSPVMGIIQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGVIPQPAILKPKPLWTGKQIFSLILPDVNLSRLNKTHPDDEKAEISPGDTKVFISRGVLICGIVDKKTV 149
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BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: A0A7S2DGX7_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGX7_9STRA)

HSP 1 Score: 159 bits (402), Expect = 3.720e-44
Identity = 75/131 (57.25%), Postives = 102/131 (77.86%), Query Frame = 1 
Query:   13 AKAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGL-GLLNDDSPQVLVLEGELIMGHVDKKTV 402
            A+AEA++LM+V + IVSPQSNKPVMGIVQDSL+ V ++TKR TF+E+D+  N LM +  W+GK+PAPAI+KP+ LWTGKQ+F++ICPK+NL  K    P   +   LN    +VL+L+G+L+MG +DKKTV
Sbjct:  104 ARAEAEQLMLVSRLIVSPQSNKPVMGIVQDSLIAVQRLTKRSTFIEKDVFFNTLMWVKKWNGKIPAPAIVKPKALWTGKQVFSMICPKINLRSKNNAFPKGNVPSTLNLYDGEVLILDGQLVMGIIDKKTV 234
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L9Y2_9PHAE4.120e-6077.44DNA-directed RNA polymerase subunit n=1 Tax=Ectoca... [more]
D8LRY3_ECTSI2.150e-5572.34DNA-directed RNA polymerase subunit n=2 Tax=Ectoca... [more]
A0A836CHC4_9STRA7.100e-5067.67DNA-directed RNA polymerase subunit n=1 Tax=Tribon... [more]
D8UWF5_9FLOR1.120e-4561.24DNA-directed RNA polymerase (Fragment) n=2 Tax=Rho... [more]
D8UWF4_9FLOR2.230e-4559.69DNA-directed RNA polymerase (Fragment) n=1 Tax=Ant... [more]
D8UWG6_9FLOR1.250e-4459.69DNA-directed RNA polymerase (Fragment) n=8 Tax=Rho... [more]
D8UWG1_9FLOR1.250e-4460.47DNA-directed RNA polymerase (Fragment) n=1 Tax=Mar... [more]
D8UWF3_9FLOR1.250e-4459.69DNA-directed RNA polymerase (Fragment) n=1 Tax=Acr... [more]
D8UWH2_9FLOR3.490e-4458.14DNA-directed RNA polymerase (Fragment) n=4 Tax=Cer... [more]
A0A7S2DGX7_9STRA3.720e-4457.25DNA-directed RNA polymerase (Fragment) n=1 Tax=Dic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109963contigH-elongata_contig109963:219..1953 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score197.2
Seed ortholog evalue4.9e-48
Seed eggNOG ortholog2880.D8LRY3
Preferred nameRPB1
KEGG rclassRC02795
KEGG koko:K03006
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko05016,ko05168,ko05169,map00230,map00240,map01100,map03020,map05016,map05168,map05169
KEGG ModuleM00180
GOsGO:0000428,GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006351,GO:0006366,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010494,GO:0016070,GO:0016591,GO:0018130,GO:0019438,GO:0019985,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0055029,GO:0061695,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:1990904
EggNOG free text desc.DNA-directed 5'-3' RNA polymerase activity
EggNOG OGsCOG0086@1,KOG0260@2759
EC2.7.7.6
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400
Hectar predicted targeting categoryother localisation
Exons3
Model size402
Cds size402
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109963.807.1prot_H-elongata_contig109963.807.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig109963 219..1953 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929626.3257544-CDS-H-elongata_contig109963:218..3171622929626.3257544-CDS-H-elongata_contig109963:218..317Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109963 219..317 +
1691679096.6308222-CDS-H-elongata_contig109963:218..3171691679096.6308222-CDS-H-elongata_contig109963:218..317Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109963 219..317 +
1622929626.3389122-CDS-H-elongata_contig109963:753..9561622929626.3389122-CDS-H-elongata_contig109963:753..956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109963 754..956 +
1691679096.6420417-CDS-H-elongata_contig109963:753..9561691679096.6420417-CDS-H-elongata_contig109963:753..956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109963 754..956 +
1622929626.365219-CDS-H-elongata_contig109963:1853..19531622929626.365219-CDS-H-elongata_contig109963:1853..1953Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109963 1854..1953 +
1691679096.6508875-CDS-H-elongata_contig109963:1853..19531691679096.6508875-CDS-H-elongata_contig109963:1853..1953Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109963 1854..1953 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig109963.807.1

>prot_H-elongata_contig109963.807.1 ID=prot_H-elongata_contig109963.807.1|Name=mRNA_H-elongata_contig109963.807.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
KSLLAKAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVE
RDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGR
VHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV
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mRNA from alignment at H-elongata_contig109963:219..1953+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig109963.807.1 ID=mRNA_H-elongata_contig109963.807.1|Name=mRNA_H-elongata_contig109963.807.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1735bp|location=Sequence derived from alignment at H-elongata_contig109963:219..1953+ (Himanthalia elongata Himel1 dioecious)
AAGAGCCTTCTGGCGAAGGCGGAGGCCCAAGAGCTAATGATGGTGCCGAA
GAACATCGTCAGCCCTCAATCCAACAAGCCGGTTATGGGCATCGTGCAGG
TGTTCCAGTCAGTCTGCCTTCGCCTGGCGTGGTGTTCTGCCACAGCTTTT
GCGTGTGTGTATTTCAGCACGCCTTAACCCTTATGGAACTCGATCCGTTT
TTATTCTAAATTCAATATAAAACTTGAAATCCAGTTCCAGAAGGGTTAAG
AGGGAATATATGAAGTATATTCATTACAATACGTTGTCCTCAACAGTGTT
GTTCCCCGCGGGTGCACCAATCCAATCATATGTATCTATGTATCGTGCAC
TGTAATAAACTAAAAAATAAAAGGCGTTTTGATGAGACAGGAAGTGCTGG
ATATCTTTTTGGTATTCCCACTGTTATCTTCATACATTTTTTTGTTTGTA
ATACAATAGGCGTAGTAGAACATCTTGTCGTTGTTGTTATTTATCCCCCC
CCCACAATGCGGTTGTGGATGTTTTGTTTTTGCAGGACTCCCTACTGGGG
GTGTGTAAAATGACCAAACGCGACACGTTCGTAGAGCGGGACTTGATGAT
GAACCTGCTCATGTCGATAGGCACGTGGGATGGCAAGGTCCCCGCGCCGG
CGATCCTTAAGCCGCGACCCCTTTGGACGGGAAAGCAAATGTTTACGTTA
ATATGCCCCAAGGTGAACCTCTCCGAGAAAGGGAGGGTGTTGGAAATATG
TTGTAGGAGAGGGTAGAAGGGACGACGGGGGGGGTGGGGCGTGTTATCGA
TGGAATCCTCATGGGCATCGTGTGACGAATCAGGATAGTCGGCGCCCTGC
CCCTCCCCCCCCTCCATCTCTTCTGATGATGATATCATTGCAGGAGGGGA
TCGAGAACGTTGATGCATGTCTGAAATATTTCGTAAGCGCAAAATGCGTA
AAAAACTCTTTTTTAAAAAAGTGCGAAATACTGTGGATGTAAATGCTTTA
AATGTTCTGCATACACGAAAATGTGATGTACTTTCAGGGGCTATATATTG
TCATGTATGTTATTAATAGTACTTTGAATCAGGTATATTTTCATGCTGGA
GAGAGGATAGAGCAAGCCCCGCCACTTCCACCGCCTCTTCGAAAATGCAA
ATAAAAAATATATATATTGTAGATCACCTTTAACCCCTATGGAACTCGAT
CTGTTTTTTATACACTAAATTCAATATAAAAGTTGAAATCCAGTTCAAGA
AGGGTTAAAACAGTGGGGTTGTTTTACCGAAACCACGAACGGTCAGGTTA
ACTTTGAGGCGACGGCGAACGGTCATCCCAAGGGAACCATCACTCTCAAC
AACACCGATACCAAGGTATGGCCTGTGCACAGCAGAAGGGATACGTCTGT
CCGTGCGTTCAAGCGGTCTTCGCGCAACATGCCTGTGTCAGAGGAGAGCT
CCATATTGTTTCTGGGTAGGGGGAGGGGATCTTGTCGTTACGCGATCGAA
CTATATTTCTTAACATGCATTCTAGCCTACCCGACTTTACACTTATGTCG
ACCAAGAGGGGTGTGTGGTAGGTGCCATGATAAATAGGCGAGACCATCTG
CAAAGGCGCGTGGAAATCGCCTGGCCTGTTTAAAGCCACCCGATGCCCGG
TCTGGGCCTTCTGAACGACGACTCGCCGCAGGTGCTTGTGCTGGAGGGCG
AACTTATCATGGGCCACGTTGATAAGAAAACGGTC
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Coding sequence (CDS) from alignment at H-elongata_contig109963:219..1953+

>mRNA_H-elongata_contig109963.807.1 ID=mRNA_H-elongata_contig109963.807.1|Name=mRNA_H-elongata_contig109963.807.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at H-elongata_contig109963:219..1953+ (Himanthalia elongata Himel1 dioecious)
AAGAGCCTTCTGGCGAAGGCGGAGGCCCAAGAGCTAATGATGGTGCCGAA
GAACATCGTCAGCCCTCAATCCAACAAGCCGGTTATGGGCATCGTGCAGA
AGAGCCTTCTGGCGAAGGCGGAGGCCCAAGAGCTAATGATGGTGCCGAAG
AACATCGTCAGCCCTCAATCCAACAAGCCGGTTATGGGCATCGTGCAGGA
CTCCCTACTGGGGGTGTGTAAAATGACCAAACGCGACACGTTCGTAGAGC
GGGACTTGATGATGAACCTGCTCATGTCGATAGGCACGTGGGATGGCAAG
GTCCCCGCGCCGGCGATCCTTAAGCCGCGACCCCTTTGGACGGGAAAGCA
AATGTTTACGTTAATATGCCCCAAGGTGAACCTCTCCGAGAAAGGGAGGG
TGACTCCCTACTGGGGGTGTGTAAAATGACCAAACGCGACACGTTCGTAG
AGCGGGACTTGATGATGAACCTGCTCATGTCGATAGGCACGTGGGATGGC
AAGGTCCCCGCGCCGGCGATCCTTAAGCCGCGACCCCTTTGGACGGGAAA
GCAAATGTTTACGTTAATATGCCCCAAGGTGAACCTCTCCGAGAAAGGGA
GGGTCCACCCGATGCCCGGTCTGGGCCTTCTGAACGACGACTCGCCGCAG
GTGCTTGTGCTGGAGGGCGAACTTATCATGGGCCACGTTGATAAGAAAAC
GGTCCCACCCGATGCCCGGTCTGGGCCTTCTGAACGACGACTCGCCGCAG
GTGCTTGTGCTGGAGGGCGAACTTATCATGGGCCACGTTGATAAGAAAAC
GGTC
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