mRNA_H-elongata_contig109649.780.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig109649.780.1
Unique NamemRNA_H-elongata_contig109649.780.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: D8LG17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG17_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 1.680e-122
Identity = 170/212 (80.19%), Postives = 187/212 (88.21%), Query Frame = 1
Query:    1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
            QGKI+GILWMVPIYA+DSFVSLRFK+ A YVD LRDCYEGYALYLFLALMVGYLGDGDEYKVVDILE+CP ++HAWPFG+V+KGP+PHGRDFLRFAKFG LQYS +KPLAA VAL+LA  GL++EGDFS+YGGWLY+S  VNLSVCYAFYCLGMFYYVLK PLKPFDPVPKFLCIKAVLFLS+WQ           IVIAGL +LNLIH MG
Sbjct:   41 QGKIIGILWMVPIYAIDSFVSLRFKNTAPYVDMLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILEQCPSSKHAWPFGLVMKGPMPHGRDFLRFAKFGTLQYSCVKPLAAFVALVLAPFGLFQEGDFSIYGGWLYISFVVNLSVCYAFYCLGMFYYVLKTPLKPFDPVPKFLCIKAVLFLSFWQG----------IVIAGLVKLNLIHEMG 242          
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: A0A6H5JER3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER3_9PHAE)

HSP 1 Score: 357 bits (915), Expect = 2.190e-120
Identity = 169/212 (79.72%), Postives = 187/212 (88.21%), Query Frame = 1
Query:    1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
            QGKI+GILWMVPIYA+DSFVSLRF++ A YVD LRDCYEGYALYLFLALMVGYLGDGDEYKVVDILE+CP ++HAWPFG+V+KGP+PHGRDFLRFAKFG LQYS +KPLAA VAL+LA  GL++EGDFS+YGGWLY+S  VNLSVCYAFYCLGMFYYVLK PLKPFDPVPKFLCIKAVLFLS+WQ           IVIAGL +LNLIH MG
Sbjct:   41 QGKIIGILWMVPIYAIDSFVSLRFRNTAPYVDMLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILEQCPSSKHAWPFGLVMKGPMPHGRDFLRFAKFGTLQYSCVKPLAAFVALVLAPFGLFQEGDFSIYGGWLYISFVVNLSVCYAFYCLGMFYYVLKTPLKPFDPVPKFLCIKAVLFLSFWQVC--------GIVIAGLVKLNLIHEMG 244          
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: A0A7S2UV50_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV50_9STRA)

HSP 1 Score: 256 bits (654), Expect = 2.210e-81
Identity = 120/212 (56.60%), Postives = 154/212 (72.64%), Query Frame = 1
Query:    1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
            Q K+VGILWM PIYA DS+VSLRFKD A+Y D LRDCYEGY LYLFLAL++ Y+G G+E++VV   E  P+ EH +PF ++ +GP+PHG+ FLR+ KFG LQYS +KP+    A+++   G Y EGDF+   GW+Y++   N SV +AFYCLGMFY VLK  L PFDPVPKFLC+K VLFLS+WQ+          +VIAGL +L +I  +G
Sbjct:   47 QSKVVGILWMTPIYAFDSWVSLRFKDWAIYFDMLRDCYEGYVLYLFLALLIAYVGRGNEFEVVRACEAAPRVEHVFPFNLMFRGPVPHGKSFLRWCKFGTLQYSALKPVTTVFAVLMRLVGRYHEGDFNPTYGWVYVTTITNFSVIWAFYCLGMFYVVLKKSLAPFDPVPKFLCVKMVLFLSFWQS----------VVIAGLVKLGIITDLG 248          
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: A0A835Z2Y7_9STRA (Organic solute transporter subunit alpha/Transmembrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y7_9STRA)

HSP 1 Score: 243 bits (619), Expect = 5.520e-77
Identity = 124/212 (58.49%), Postives = 152/212 (71.70%), Query Frame = 1
Query:    1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
            Q KIVGILWMVPIYAV S++ LRFKDAA  ++ +RDCYEGYALYLFLALMV YLG GDE +VV +LE     +  +P  ++    LP G  FLR+AK G LQYSVIKP  A +AL+L+  G +KEGDF    GW++L++ +N SV  AFY L  FY +LK PL PF PVPKFLCIKAVLFLS+WQ           +V+AGL+RL+LIHA+G
Sbjct:   39 QSKIVGILWMVPIYAVSSWLGLRFKDAAPTLNMMRDCYEGYALYLFLALMVAYLGGGDERRVVALLETRKPMKTTFPMSLLFGKELPQGEQFLRWAKLGTLQYSVIKPSCAMMALVLSLMGRFKEGDFDPRKGWVWLTIIINASVAVAFYSLVAFYVMLKEPLAPFKPVPKFLCIKAVLFLSFWQG----------VVVAGLARLHLIHAIG 240          
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: W7TCG7_9STRA (Transmembrane protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCG7_9STRA)

HSP 1 Score: 238 bits (608), Expect = 3.130e-73
Identity = 121/213 (56.81%), Postives = 151/213 (70.89%), Query Frame = 1
Query:    1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKG-PLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
            Q KIVGILWMVPIY+V S++SL FK  ALY+D  RDCYE Y LYLFLAL+V YLGDG+E +VV +L+  P+ +H  PF + L G  +PHG DFLRF KFG +QY V+KP     A+ILA+ GLY EG F++   W+Y +L +N+SV YAFYCLG+FY +L  PL+  +PVPKFLCIKAVLFLS+WQ           +VIA L RL L+   G
Sbjct:   40 QSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQG----------VVIAALVRLGLLPHFG 242          
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: A0A7S3XW93_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW93_HETAK)

HSP 1 Score: 237 bits (604), Expect = 1.070e-72
Identity = 114/212 (53.77%), Postives = 149/212 (70.28%), Query Frame = 1
Query:    1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
            Q KIVGILWMVPIYA DS++SLRF+ AALY+D LRD YEGY LYLFLAL + YLG G++Y+++   +  P  EH WPF +V +G +P G +F+RF K G LQYSV+KP+   +AL L     ++EG+F +  GWL+  +  N+SV +AFYCLG+FY  LK  L P+DP+PKFLCIKA+LFL +WQ           + IA L+R+ LIH MG
Sbjct:   92 QSKIVGILWMVPIYAFDSWISLRFRQAALYLDMLRDVYEGYVLYLFLALCIAYLGRGNDYEILKYCQLPPGLEHPWPFRLVCRGGVPTGENFVRFCKLGTLQYSVMKPILTMMALSLKLSNNFEEGNFGLTSGWLWTVMLNNISVVWAFYCLGVFYIGLKKALAPYDPIPKFLCIKAILFLCFWQG----------LAIALLTRMGLIHEMG 293          
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: A0A5D6Y6C0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6C0_9STRA)

HSP 1 Score: 233 bits (594), Expect = 1.300e-72
Identity = 119/212 (56.13%), Postives = 147/212 (69.34%), Query Frame = 1
Query:    1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
            Q KIVGILWMVPIYA DS++SLRFKDAALY+D +RD YEGY +YLFLALM+ YLGDG E +VV+IL   P   H +PF      P+  G  F+R  K   +Q+ V+KPL + VA++L   G+Y +G FS   G+LY SL VN S+ YAFY L +FY  L  PLKPF+PVPKFLCIKAVLFLS+WQ+          +V+A LSR  LIH +G
Sbjct:   57 QSKIVGILWMVPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGDGSEERVVEILRSLPDMPHPYPFSKWC-APVKLGAAFIRDCKLATMQFVVLKPLMSLVAIVLELNGVYNQGSFSAATGYLYTSLVVNASITYAFYYLVLFYLALGEPLKPFNPVPKFLCIKAVLFLSFWQS----------VVLAFLSRFQLIHEVG 257          
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: A0A8K1CG08_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG08_PYTOL)

HSP 1 Score: 232 bits (591), Expect = 7.750e-72
Identity = 119/212 (56.13%), Postives = 149/212 (70.28%), Query Frame = 1
Query:    1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
            Q KIVGILWMVPIYA DS++SLRFKDAALY+D +RD YEGY +YLFLALM+ YLGDG   KVV +L R P   H +PF   L  P+  G +FLR  K   +Q+ V+KPL A  A++L   G+Y +G+FSV  G+LY+SL VN S+ YAFY L +FY  L   LKP++PVPKFLCIKAVLFLS+WQ+          +V+A LSR  +IH +G
Sbjct:   58 QSKIVGILWMVPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGDGSNEKVVAVLNRLPDLPHPFPFNRWLS-PIRMGPEFLRDCKMATMQFVVLKPLMAFFAIVLQVYGVYDQGNFSVTKGYLYISLVVNASITYAFYYLVLFYLALGDHLKPYNPVPKFLCIKAVLFLSFWQS----------VVLAFLSRFQIIHEIG 258          
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: K3X8Z4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8Z4_GLOUD)

HSP 1 Score: 229 bits (585), Expect = 8.410e-71
Identity = 116/212 (54.72%), Postives = 146/212 (68.87%), Query Frame = 1
Query:    1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
            Q KI+GILWMVPIYA DS++SLRFKDAALY+D +RD YEGY +YLFLALM+ YLG G   KVV IL   P   H WPF      P+  G +F+R  K   +Q+ V+KPL A +A++L  +G+Y +G FSV  G+LY SL VN S+ YAFY L +FY  L   LKP++PVPKFLCIKAVLFLS+WQ+          +V+A LSR  +IH +G
Sbjct:   66 QSKIIGILWMVPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGGGSHEKVVQILRSLPDLSHPWPFNKWC-APIKMGPEFIRDCKMATMQFVVLKPLMAFLAIVLEIRGVYNQGSFSVTTGYLYTSLIVNTSITYAFYYLVLFYLALGDHLKPYNPVPKFLCIKAVLFLSFWQS----------VVLAFLSRFQIIHEVG 266          
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: H3H3Y5_PHYRM (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3H3Y5_PHYRM)

HSP 1 Score: 229 bits (584), Expect = 1.440e-70
Identity = 114/212 (53.77%), Postives = 145/212 (68.40%), Query Frame = 1
Query:    1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
            Q KIVGILWM+PIYA DS++SLRFKDAALY+D +RD YEGY +YLFLALM+ YLG G   +V+ I+   P  EH WPF    K P+  G  FLR  K   +Q+ V+KP+ A VA++L   G+Y +G+FS   G+LY SL VN S+ YAFY L +FY  L   L P++PVPKFLCIKAVLFLS+WQ+          +V+A LSR  +IH +G
Sbjct:   61 QSKIVGILWMIPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGGGSNERVITIMRGLPDLEHPWPFNRWCK-PIQMGPGFLRDCKMATMQFVVVKPMMAFVAIVLRINGMYDQGNFSAKKGYLYTSLIVNASITYAFYYLVLFYLALSTQLAPYNPVPKFLCIKAVLFLSFWQS----------VVLAFLSRFQIIHELG 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG17_ECTSI1.680e-12280.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JER3_9PHAE2.190e-12079.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UV50_9STRA2.210e-8156.60Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z2Y7_9STRA5.520e-7758.49Organic solute transporter subunit alpha/Transmemb... [more]
W7TCG7_9STRA3.130e-7356.81Transmembrane protein n=2 Tax=Monodopsidaceae TaxI... [more]
A0A7S3XW93_HETAK1.070e-7253.77Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5D6Y6C0_9STRA1.300e-7256.13Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1CG08_PYTOL7.750e-7256.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3X8Z4_GLOUD8.410e-7154.72Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3H3Y5_PHYRM1.440e-7053.77Uncharacterized protein n=18 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109649contigH-elongata_contig109649:277..2037 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score341.3
Seed ortholog evalue3.2e-91
Seed eggNOG ortholog2880.D8LG17
EggNOG free text desc.negative regulation of brassinosteroid mediated signaling pathway
EggNOG OGsKOG2641@1,KOG2641@2759
Ec32 ortholog descriptionOrganic solute transporter subunit alpha/Transmembrane protein 184
Ec32 orthologEc-21_004950.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size645
Cds size618
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109649.780.1prot_H-elongata_contig109649.780.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig109649 277..2010 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929623.2509925-CDS-H-elongata_contig109649:276..3341622929623.2509925-CDS-H-elongata_contig109649:276..334Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109649 277..334 -
1691679095.5266557-CDS-H-elongata_contig109649:276..3341691679095.5266557-CDS-H-elongata_contig109649:276..334Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109649 277..334 -
1622929623.2695634-CDS-H-elongata_contig109649:921..11331622929623.2695634-CDS-H-elongata_contig109649:921..1133Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109649 922..1133 -
1691679095.5392635-CDS-H-elongata_contig109649:921..11331691679095.5392635-CDS-H-elongata_contig109649:921..1133Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109649 922..1133 -
1622929623.2932124-CDS-H-elongata_contig109649:1331..15231622929623.2932124-CDS-H-elongata_contig109649:1331..1523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109649 1332..1523 -
1691679095.5496507-CDS-H-elongata_contig109649:1331..15231691679095.5496507-CDS-H-elongata_contig109649:1331..1523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109649 1332..1523 -
1622929623.3146982-CDS-H-elongata_contig109649:1854..20101622929623.3146982-CDS-H-elongata_contig109649:1854..2010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109649 1855..2010 -
1691679095.5602403-CDS-H-elongata_contig109649:1854..20101691679095.5602403-CDS-H-elongata_contig109649:1854..2010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109649 1855..2010 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929623.3347929-UTR-H-elongata_contig109649:2010..20371622929623.3347929-UTR-H-elongata_contig109649:2010..2037Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig109649 2011..2037 -
1691679095.5697966-UTR-H-elongata_contig109649:2010..20371691679095.5697966-UTR-H-elongata_contig109649:2010..2037Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig109649 2011..2037 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig109649.780.1

>prot_H-elongata_contig109649.780.1 ID=prot_H-elongata_contig109649.780.1|Name=mRNA_H-elongata_contig109649.780.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp
MVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDE
YKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPL
AATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVL
KAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIH
AMGYA*
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mRNA from alignment at H-elongata_contig109649:277..2037-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig109649.780.1 ID=mRNA_H-elongata_contig109649.780.1|Name=mRNA_H-elongata_contig109649.780.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1761bp|location=Sequence derived from alignment at H-elongata_contig109649:277..2037- (Himanthalia elongata Himel1 dioecious)
CAGGGAAAGATCGTAGGGATCCTGTGGATGGTTCCAATATACGCGGTGGA CTCGTTCGTGAGCCTGCGCTTCAAAGATGCAGCGCTGTACGTAGACACGC TTCGAGACTGTTACGAGGGCTACGCGCTGTACCTTTTCCTGGCTCTTATG GTGGGGTACCTCGGGGACGGCGACGAGTATAAGGTACAGACAAGACTCGG GTATAAATTGCACAAAGATGGGGATCGCGTATCGGAGCAAGGCGTTTGGT TCCCGTGAAAAAAGAGTCATAAACGCCCTCTTTCGCGAGAGGTACCCGAG CTCCGGAAGGAGTTATGCAGCGGAGTTCCAAAACCTTGATATTCGTTGTA GTGAAACCCCGATTTTCCAACCTCACTGGTGCTGCTTCGCTACTCGCTAA ATTATCCTGTTATATTTCTTCGAAACGCGTGCCAGCACGCCTCACGAACC ACTATAAACGCCATAGTTCGCCCCCCCCCCGTGCCCCGTACCCCAAACAT GCCTCCGTCGGCAGGTGGTTGATATTCTGGAGCGCTGTCCGCAAGCCGAA CATGCGTGGCCATTCGGGATGGTCCTCAAGGGACCGCTCCCGCACGGCAG GGACTTCCTTCGCTTCGCCAAGTTTGGCTTGCTGCAGTACAGCGTCATCA AGCCTCTCGCGGCTACCGTGGCTCTTATCCTTGCGTCGCAGGGCTTGTAC AAAGAGGTGCGTGTCAACTCGCTCGAAAGCATTCGCGGACGATTACGGGG GTGTCGCGTTTCCGACCTCCCCCCTCCTGTACCGTTTTGAATAGAGCTGG ATCGTCTCGCCATGGAGGTGGGACTTCCTATGTTTGTATAGACGGAGGCT ACACGGCTGCGGTGTGATTTCTCGGCCTGTCGCTGCGTCAATTCCTACTC GCAGGGAGACTTCAGCGTGTACGGGGGCTGGCTCTACCTATCCCTGGCGG TAAACTTGAGCGTGTGCTACGCGTTTTACTGCCTGGGGATGTTTTACTAC GTACTCAAGGCGCCGCTGAAGCCATTCGATCCCGTTCCAAAGTTCCTGTG CATCAAGGCAGTCCTTTTCTTGAGTTACTGGCAGGCGAGACACACGACAC GCGCTGGGAAAAACGCGTTGCTGCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCTCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCTCCACGCCCCCCCNNNNNNNNNNGGGTTGCGGGGG GGCGAGACACAAGCCCCCCGCGGGGAAAAACCCGTTGTGGCCCCCCCCCC CCCCCCGCCCCGTTCCCTTTTCCCCATATATTGGCCGCGTGGCGCTCGAC CCCAACCTCTTCTAACAGCCCACCCAGCTATTGATAGTCGCACTCAGTGT ACTGTCTCGTTGTCTCGAGATGATATCGAGGCCTTCGAGTCGTGGTTGTC GTGTTTCCATTGACAAGTGTCCTCGCACCTAAAGTCGATTAGCTGCTTGT ACACTATATATATATATATATTAAACGCATTTGACACTGTTACAGGGTGT GACAAGCGCACCAGTTCTCCCAGCTGGCATATCTTATGTGTGGACCCGGA GCCGCACCGCGTCGCCATTACTCCAGCGCCGTTCACCCTGCTGTCATGTC TTGTCTCTCTCCCTCTCCGTTCCGCGGCGTGATGTGACGTGATGCACGCA GAGCATCGTCATCGCCGGATTATCGAGGCTGAATCTCATCCACGCGATGG GGTACGCTTAA
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Coding sequence (CDS) from alignment at H-elongata_contig109649:277..2037-

>mRNA_H-elongata_contig109649.780.1 ID=mRNA_H-elongata_contig109649.780.1|Name=mRNA_H-elongata_contig109649.780.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1236bp|location=Sequence derived from alignment at H-elongata_contig109649:277..2037- (Himanthalia elongata Himel1 dioecious)
ATGGTTCCAATATACGCGGTGGACTCGTTCGTGAGCCTGCGCTTCAAAGA
TGCAGCGCTGTACGTAGACACGCTTCGAGACTGTTACGAGGGCTACGCGC
TGTACCTTTTCCTGGCTCTTATGGTGGGGTACCTCGGGGACGGCGACGAG
TATAAGATGGTTCCAATATACGCGGTGGACTCGTTCGTGAGCCTGCGCTT
CAAAGATGCAGCGCTGTACGTAGACACGCTTCGAGACTGTTACGAGGGCT
ACGCGCTGTACCTTTTCCTGGCTCTTATGGTGGGGTACCTCGGGGACGGC
GACGAGTATAAGGTGGTTGATATTCTGGAGCGCTGTCCGCAAGCCGAACA
TGCGTGGCCATTCGGGATGGTCCTCAAGGGACCGCTCCCGCACGGCAGGG
ACTTCCTTCGCTTCGCCAAGTTTGGCTTGCTGCAGTACAGCGTCATCAAG
CCTCTCGCGGCTACCGTGGCTCTTATCCTTGCGTCGCAGGGCTTGTACAA
AGAGGTGGTTGATATTCTGGAGCGCTGTCCGCAAGCCGAACATGCGTGGC
CATTCGGGATGGTCCTCAAGGGACCGCTCCCGCACGGCAGGGACTTCCTT
CGCTTCGCCAAGTTTGGCTTGCTGCAGTACAGCGTCATCAAGCCTCTCGC
GGCTACCGTGGCTCTTATCCTTGCGTCGCAGGGCTTGTACAAAGAGGGAG
ACTTCAGCGTGTACGGGGGCTGGCTCTACCTATCCCTGGCGGTAAACTTG
AGCGTGTGCTACGCGTTTTACTGCCTGGGGATGTTTTACTACGTACTCAA
GGCGCCGCTGAAGCCATTCGATCCCGTTCCAAAGTTCCTGTGCATCAAGG
CAGTCCTTTTCTTGAGTTACTGGCAGGCGAGACACACGACACGCGCTGGG
AAAAACGCGGAGACTTCAGCGTGTACGGGGGCTGGCTCTACCTATCCCTG
GCGGTAAACTTGAGCGTGTGCTACGCGTTTTACTGCCTGGGGATGTTTTA
CTACGTACTCAAGGCGCCGCTGAAGCCATTCGATCCCGTTCCAAAGTTCC
TGTGCATCAAGGCAGTCCTTTTCTTGAGTTACTGGCAGGCGAGACACACG
ACACGCGCTGGGAAAAACGCCATCGTCATCGCCGGATTATCGAGGCTGAA
TCTCATCCACGCGATGGGGTACGCTTAACATCGTCATCGCCGGATTATCG
AGGCTGAATCTCATCCACGCGATGGGGTACGCTTAA
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