mRNA_H-elongata_contig1093.756.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1093.756.1
Unique NamemRNA_H-elongata_contig1093.756.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig1093.756.1 vs. uniprot
Match: D8LNP4_ECTSI (PIH1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP4_ECTSI)

HSP 1 Score: 506 bits (1304), Expect = 3.350e-168
Identity = 301/583 (51.63%), Postives = 377/583 (64.67%), Query Frame = 2 
Query:   29 ELMQLKETNPQEFETYVQMAEDAAKLASEQPEIFKALTQNKGV--DSHLSAEREKSSPALVHQRKAMHAASQ----QSRTGGDRENPDETLHLPGGRTFGLSGSEQTHQPGIVITPEPGFVIKTRLVEEGIKVFVNVCHHDRIGDSGMVKKLDKDGTELEGLNIPMSVGPPWVDKDRAGEECIVYDVIIHPKAIEECQSDKTGARRDWLCHLAMQSVMTKHACKLDPKYKLPKLKFKGNKGTGPAPQRIRDDSAKPRISEVSQNGASASSPTKPSTAFSVKTTNNPNI--STKRTISAPAMTALGAPITTVLWKNRGCEDTL-RETDASTQLLEESVRSSAEEWPDSLQVSLGGFGQGVLIPDALAEVRVQVSAYEVIVKASGHHPLQRRLPYAVLTNSASAEANCHENTLVISILIDKMPLWREPDPGSKPWLLAHALGDGG------ASGQQELAVKIHETGKCAQRKREVNVDSLPEDRFHIKLRQDIEPFSGYGSTEGYVGTHSNRP-------RQEDAPFSEGDQLPEDQFHKADIISQHVKDTREQQRREKIRRAEEEREARKKNPQE-GVEYVDFD 1708
            +LM+LK+T+P +F  YVQMA DAAKLA E+P++F+ L +  G   D  L+A       A   +R+AM AAS+      R G  ++  D  ++LPGG   G  G +     GIVI+P PGFVIKT+LV++G+KVFVNVC H+RIG+S MVKKLDK+G E+EGLNIPMSVGPP VDKD AG ECIVYDVII+PK IEEC +DKTG +RDW+CHLAMQSVM+KH C+LDPKYKLPKL FKGNK  GPA QRIRDDSA+P+I E+   G    +    STA   K    P    S K+  S   +TAL + +T V W   G E T  RE++ S   LE++VR   E WPDSL V+  G     L PDAL ++ V+ SAYEV +KA GH PLQ RLPYA L  +ASA+ N HE TL +SI +D   L ++ D GSKPWLL+ AL  GG      AS            G       E   D+LPEDRFH++L   +  ++G    +     H   P        +E+ P  EG+ LPE++FH+ADI+SQH+ DTREQQR+EKI RAE+EREARKK PQ+ GVEYVDFD
Sbjct:   69 DLMRLKDTDPDQFAEYVQMAADAAKLAEERPDVFEQLMRGDGAAGDEDLTA-------AQAEKRRAMDAASELTGANKRKGDSKDGVDMDINLPGGAKLGAGGVKDKTN-GIVISPRPGFVIKTKLVDKGMKVFVNVCQHERIGESSMVKKLDKEGQEVEGLNIPMSVGPPSVDKDNAGLECIVYDVIINPKTIEECGADKTGGQRDWVCHLAMQSVMSKHDCRLDPKYKLPKLTFKGNKEEGPAKQRIRDDSARPQIRELRAGGGKDQAKGG-STAGDGKGGMRPAAGGSAKKRASTIPVTALKSTVTAV-WSRGGGESTEERESEVSATSLEDTVRIPPEHWPDSLVVTAAGLRTDALAPDALDKIGVEASAYEVTLKAPGHLPLQVRLPYAALPATASAKTNSHEGTLAVSIDVDNSDLTKQADVGSKPWLLSSALEGGGERKTGRASXXXXXXXXXXXXGVKGS---EGGDDALPEDRFHLRLPAGVNQYTGAAEGDDADSNHDLLPGGVDRNQEKEEEPIGEGESLPEERFHRADIVSQHMIDTREQQRKEKIDRAEKEREARKKQPQDDGVEYVDFD 638
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BLAST of mRNA_H-elongata_contig1093.756.1 vs. uniprot
Match: A0A835ZG52_9STRA (Pre-RNA processing PIH1/Nop17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG52_9STRA)

HSP 1 Score: 306 bits (784), Expect = 2.690e-92
Identity = 213/549 (38.80%), Postives = 291/549 (53.01%), Query Frame = 2 
Query:   95 AAKLASEQ---PEIFKALTQNKGVDSHLSAEREKSSPALVHQRKAMHAASQQSRTGGDRENPDETLHLPGGRTFGLSGSEQTHQPGIVITPEPGFVIKTRLVEEGIKVFVNVCHHDRIGDSGMVKKLDKD-GTELEGLNIPMSVGPPWVDKDRAGEECIVYDVIIHPKAIEECQSDKTGARRDWLCHLAMQSVMTKHACKLDPKYKLPKLKFKGNKGTGPAPQRIRDDSAKPRISEVSQNGASASSPTKPSTAFSVKTTNNPNISTKRTISAPAMTALGAPITTVLWKNRGCEDTLRETDASTQLLEESVRSSAEEWPDSLQVSLGGFGQGVLIPDALAEVRVQVSAYEVIVKASGHHPLQRRLPYAVLTNSASAEANCHENTLVISILIDKMPLWREPDPGSKPWLLAHALGDGGASGQQELA----VKIHETGKCAQRKREVNVDSLPEDRFHIKLRQDIEPFSGYGSTEGYVGTHS---NRPRQEDAPFSEGDQLPEDQFHKADIISQHVKDTREQQRREKIRRAEEEREARKKNPQEGVEYVDFD 1708
            AAKLA+ Q   PE F  L Q    D+  SA+   S  AL+    A+ AA          E+  E L LPGG   G +G +Q    G+ +TP+PGFV+KT+ ++ G KVF+NVC  D IG  G  K+LD+D G E+E +N+P+SVGPP    D+AG    VYDV+++PK +EE  +D+TGA+RD++CH+A + V  KH C+LD +YKLPK          PA QR+RD    P I EV Q   S ++                    K     PA+     P+   +   R  ED   E D + Q    +V      WP  L + + G  +    P  L  + +++S +E++++  GH  L   LPYAV  +SA A  + H  TL + I +D  P    PDPGS+PWLLA AL  G   G Q+ A    V  H   + +      + D LPEDRFH++L + +  +SG    EG  G  +     P   D   S  D LPED+FHK DI+SQH  ++R+QQRREKI RA+ ER  R +N   GVEYVDFD
Sbjct:    8 AAKLAALQQSDPEAFAQLAQLASGDAGSSAQGPASGAALLEALAALEAAG---------ESRGE-LDLPGGGVLGETGVKQK-DAGVKMTPDPGFVVKTKELDTGCKVFLNVCSSDLIGVPGPCKRLDEDTGEEVEVINMPVSVGPPREYADKAGGAATVYDVVVNPKVLEEVDADRTGAQRDFVCHMAREYVERKHKCRLDERYKLPKTTIP------PALQRVRDTRNAPVIQEVPQPQQSRAA-------------------AKHQAPPPALPP--QPLKFWVRARRRVEDADLE-DVTGQDPATTVCIPPAAWPHELLIVVAGLREEACAPGGLQSMMLKLSVFELLLEVPGHDSLSVLLPYAVRADSADARVDPHLRTLTVRITVDATPPELRPDPGSRPWLLAEALRRGDDGGDQQQAKQSTVASH---RSSSPDGATDPDDLPEDRFHLRLPKGVNKYSG--ELEGDTGEGAAPGEAPLPPDGDDSGNDALPEDKFHKQDIVSQHYIESRDQQRREKIDRADRERAERLRNKDPGVEYVDFD 512
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BLAST of mRNA_H-elongata_contig1093.756.1 vs. uniprot
Match: A0A7S2B8J4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B8J4_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.590e-65
Identity = 184/570 (32.28%), Postives = 280/570 (49.12%), Query Frame = 2 
Query:   56 PQEFETYVQMAEDAAKLASEQPEIFKALTQNKGVDSHLSAEREKSSPALVHQRKAMHAASQQSRTGGDRENPDETLHLPGGRTFGLSGS-EQTHQPGIVITPEPGFVIKTRLVEEGI-------KVFVNVCHHDRIGDSGMVKKLDKDGTELEGLNIPMSVGPPWVDKDRAGEECIVYDVIIHPKAIEECQSDKTGARRDWLCHLAMQSVMTKHACKLDPKYKLPKLKFKGNKGTGPAPQRIRDDSAKPRISEVSQNGASASSPTK-------PSTAFSVKTTNNPNISTKRTISAPAMTALGAPITTVLWKNRGC-EDTLRETDASTQLLEESVRSSAEEWPDSLQVSLGGFGQGVLIPDALAEVRVQVSAYEVIVKASGHHPLQRRLPYAVLTNSASAEANCHENTLVISILIDKMPLWREPDPGSKPWLLAHALGDGGASGQQELAVKIHETGKCAQRKREVNVDSLPEDRFHIKLRQD-IEPFSGYGSTEGYVGTHSNRPRQEDAPFSEGDQLPEDQFHKADIISQHVKDTREQQRREKIRRAEEEREAR--KKNPQEGVEYVDFD 1708
            P+  E + QM +    L ++ P  F+ + Q   + + ++   +++   L    +A HAA    + G      +E + LPG +  GL G+ +QT++ GI ITPEPGFVIKT+ V++         KVF+N+C H+ +    M K+L+ +G E+EGLN+P+S+GPP    D  G + IVYD ++HP  I+E + D+TG ++++LC LA+Q V  K+ C+LD KYKLPK  +KG     P  QRI+D S   +ISEVS   A      K       PS A  +   N P   T  T+   A    G     VL  N    E T R  D    L  E V  +       +    G  G  V+         + V+ Y + ++   H P+   +PY +      A  + HE  + + I ++       PDPGS+PWLL+HAL   G   ++      +E+G  A    E      PED++H+  +   I+PF+G              P +++ P  E ++LPED+FHK D +S H    RE  + EK +R  +E+  R  KK     VEY+D +
Sbjct:   39 PELAELHAQMEQ----LRAQDPAAFEEMMQAAALQAQMATNPDEALGGLHAAMQAQHAA----KVG------EEGVQLPGDKKMGLDGTMKQTNEAGIDITPEPGFVIKTKRVDQAGTAPGAVGKVFINLCQHEGVEKPVMKKRLNDEGEEVEGLNVPLSIGPPRACDDAKGVKAIVYDCVVHPSVIDESKEDETGNQQNFLCQLALQYVEQKYKCELDRKYKLPKATYKGE----PTSQRIKDRSKAAKISEVSDAPAGGGGKKKGKKKGATPSHAKQMPIENKPLPYTVHTVGG-AEDEGGDEGGEVLVDNESLTEPTTRRDDLGVALPSEVVFRAGP-----VSEYAGRCGPEVM--------ELDVTPYGLSLRVPSHLPISITMPYGLNVEQVDATYDPHERVMEVRIPVNPTSYSAGPDPGSRPWLLSHALE--GTDEERGAVDADNESGNTAGGTGE----GAPEDKYHLNSKPGKIDPFTGL-------------PSRQEEPVDEDEELPEDRFHKDDPMSNHYIQQREGDKAEKHKRHADEKAERESKKEKDPNVEYIDTE 557
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BLAST of mRNA_H-elongata_contig1093.756.1 vs. uniprot
Match: A0A6A3T0F9_9STRA (PIH1 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3T0F9_9STRA)

HSP 1 Score: 193 bits (491), Expect = 5.490e-50
Identity = 148/469 (31.56%), Postives = 233/469 (49.68%), Query Frame = 2 
Query:  257 DRENPDETLHLPGGRTFGLSGSEQTHQPGIVITPEPGFVIKTRLVEEGIKVFVNVCHHDRIGDSGMVKKLDKDGTELEGLNIPMSVGPPWVDKDRAGEECIVYDVIIHPKAIEECQSDKTGARRDWLCHLAMQSVMTKHACKLDPKYKLPKLKFKGNKGTGPAPQRIRDDSAKPRISEVSQNGASASSPTKPSTAFSVKTTNNPNISTKRTISAPAMTALGAPITTVLWKNRGCEDTLRETDASTQLLEESVRSSAEEWPDSLQVSLGGFGQGVLIPDALAEVRVQVSAYEVIVKASGHHPLQRRLPYAVLTNSASAEANCHENTLVISILIDKMPLWREPDPGSKPWLLAHALGDGGASGQQELAVK-IHETGKCAQRKREVNVDSLPEDRFHIKLRQDIEPFSGYGSTEGYVGTHSNRPRQEDAP----FSEGDQLPEDQFHKADIISQHVKDTREQQRREKIRRAE 1648
            D  +PD     PG +     G + T + G+ I  +PGFV+KT   +   KVFVNV + D I      KKLD +G E EG+++P+S+G P   KD+ GE  + +DV ++ K +E+CQ+DKTGA R+++C LA++ +  K+  KLD +YKLP+L ++G     P P+     +  P I E++ N ++AS   + +   + K+T  P+     T         G+  T        C         ST L  E ++ +  +   S+Q     F   V      +++  ++ A  + VKA+ HH L+  LPY V  +S     +   N++ I++ IDK    + PD GS PWLLA AL      G+ E     + +T   A    +V   SL E  FH+    D        S E ++G   N P  + AP      E ++LPED+FH+ D++S H+ + R  +R +K + AE
Sbjct:   77 DANSPDFKPRFPGDKVMEEDGLKATPE-GMYIDVKPGFVMKTNDAKSKKKVFVNVVYADEIQGFSEKKKLDGEGKEQEGIHVPLSLGAPHEVKDKKGESSLAFDVAVNTKVVEDCQADKTGAFRNFVCELAIEYIDQKYKVKLDDRYKLPRLTYRGEL---PPPKHYIRKTQAPIIQEIAANNSAASKKARSAKPAAQKSTKAPSAPKTATAQYEVFEKHGSERTV-------CSRLPSVMKGSTPLSPEVLQQTDSQLIISIQ-----FENDV---KTASDIDFELHAELLSVKAATHHDLEIFLPYPVEVSSVEVCLDRTRNSMEITLTIDKSWNTQGPDCGSAPWLLARAL-----DGENEAGTTGVKDTASPATDSAQVKPKSLVE-MFHLVNAAD--------SNEEWLG---NEPASKAAPRWDPVMEDEELPEDRFHRKDMMSMHILEQRRIEREQKAKEAE 509
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BLAST of mRNA_H-elongata_contig1093.756.1 vs. uniprot
Match: A0A482SP74_9ARCH (PIH1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SP74_9ARCH)

HSP 1 Score: 183 bits (465), Expect = 1.130e-47
Identity = 134/454 (29.52%), Postives = 219/454 (48.24%), Query Frame = 2 
Query:  350 ITPEPGFVIKTRLVEEGIKVFVNVCHHDRIGDSGMVKKLDKDGTELEGLNIPMSVGPPWVDKDRAGEECIVYDVIIHPKAIEECQSDKTGARRDWLCHLAMQSVMTKHACKLDPKYKLPKLKFKGNKGTGPAPQRIRDDSAKPRISEVSQNGASASSPTKPSTAFSV---KTTNNPNISTKRTISAPAMTALGAPITTVLWKNRG-------CEDTLRETDASTQLLEESVRSSAEEWPDSLQVSLGGFGQGVLIPDALA------EVRVQVSAYEVIVKASGHHPLQRRLPYAVLTNSAS-----AEANCHENTLVISILIDKMPLWREPDPGSKPWLLAHALG-DGGASGQQELAVKIHETGKCAQRKREVNVD----SLPEDRFHIKLRQDIEPFSGYGSTEGYVGTHSNRPRQEDAPFSEGDQLPEDQFHKADIISQHVKDTREQQRREK 1633
            ITP  GF  KT  + E  KVF+N+ HH+ IG+  M KKLD +G E+EGLN+PMSVG    D D+ G+ C VYD+++H   + +C  D TG  R+++C L +QS+  K++ +LD +YK+PKL + G     PA Q I+D  + P I EV+   +SA++  K          + T    ++ +    A     LG  +      +         C+       A  ++ +E    S +++ + +Q    G    +++ D  A       +++ +S Y+V +K   +       P  +  N +       E    +  + I + +D  P   +PD GSKPWLLA AL  D   +         + + +  +    + VD    + PED+FH+ L  D++P++G    +G + T  N    E         LPED+FHK D  S ++ + REQ ++EK
Sbjct:    3 ITPTAGFSYKTYTIPEKSKVFINITHHEAIGEPQMAKKLDAEGQEVEGLNVPMSVGTGRADADKKGQSCTVYDIVVHHSVLNDCTKDPTGKYREFICQLGIQSIEQKYSIQLDKRYKIPKLAYMG--AEIPA-QYIKDKKSMPTIQEVTSLSSSAATTKKXXXXXXXXXXQQTAAVPVADQDLEVASFWCGLGDHVEDSQTDHERMQALLTYCQSADTSYVADGKIKKEKHSFSLKDYVEPIQPHPTGMTAILVVADIQAYELLPSNIQISISPYKVTIKFPQYKKFVGYFPVCIQPNHSFYRLSLVEGYVGKKRVEIILPLDLFPWDEQPDAGSKPWLLAQALNYDDNTTTHDTTDANPYGSMRHVKSSLVMGVDEDSQAYPEDKFHLNLPADVDPYTGV-KYDG-LSTGENLDEME---------LPEDRFHKKDAASSYIINQREQTKKEK 442
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BLAST of mRNA_H-elongata_contig1093.756.1 vs. uniprot
Match: G4YEG2_PHYSP (PIH1 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YEG2_PHYSP)

HSP 1 Score: 184 bits (466), Expect = 9.190e-47
Identity = 145/470 (30.85%), Postives = 221/470 (47.02%), Query Frame = 2 
Query:  257 DRENPDETLHLPGGRTFGLSGSEQTHQPGIVITPEPGFVIKTRLVEEGIKVFVNVCHHDRIGDSGMVKKLDKDGTELEGLNIPMSVGPPWVDKDRAGEECIVYDVIIHPKAIEECQSDKTGARRDWLCHLAMQSVMTKHACKLDPKYKLPKLKFKGNKGTGPAPQRIRDDSAKPRISEVSQNGASASSPTKPSTAFSVKTTNNPNISTKRTISAPAMTALGAPITTVLWKNRGCEDTLRETDASTQLLEESVRSSAEEWPDSLQVSLGGFGQGVLIPDAL---AEVRVQVSAYEVIVKASGHHPLQRRLPYAVLTNSASAEANCHENTLVISILIDKMPLWREPDPGSKPWLLAHALGDGGASGQQELAVKIHETGKCAQRKREVNVDSLPEDRFHIKLRQDIEPFSGYGSTEGYVGTHSN---RPRQEDAPFSEGDQLPEDQFHKADIISQHVKDTREQQRREKIRRAE 1648
            D  +PD     PG +  G  G + T + G+ I  +PGFV+KT  V+   KVFVNV + D I      KKLD +G E EG+++P+S+G P   KD+ G   + +DV ++ K +E+CQ+DKTGA R+++C LA++ +  K+  KLD +YKLP+L ++G     P P+     +  P I E                                           A     L++  G E T+         L   ++ S    P+ LQ +       V   + +    +V +++ A  +IVKA+ HH L+  LPY V  +SA    N   N++ I++ IDK     +PD GS PWLLA AL       ++E   +  +T   A    +    SL E  FH+    D        S E  VG  S     PR +  P  E ++LPED+FH+ D++S H+ + R  +R +K + AE
Sbjct:   77 DANSPDFKPLFPGDKVMGEDGLKATPE-GMYIDVKPGFVMKTNDVKSKKKVFVNVVYADEIQGFSEKKKLDDEGKEQEGIHVPLSLGAPHEVKDKKGVSSLAFDVAVNTKVVEDCQADKTGAFRNFVCELAIEYIDQKYKIKLDDRYKLPRLTYRGEL---PPPKHYIRKTQAPIIQET------------------------------------------ATAKCELFEKHGSEPTVCSR------LPSIMKGSTPLSPEVLQQAGSQLIVSVRFENEVKTATDVDLELHAELLIVKAATHHDLEIFLPYPVEVSSAKVCLNRSRNSMEITLTIDKSWDAVKPDSGSAPWLLARAL-------EEENGAETQDTASSATDSAQPKPKSLVE-MFHLANAAD--------SNESLVGNGSALKATPRWD--PVMEDEELPEDRFHRKDMMSMHILEQRRIEREQKAKEAE 476
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BLAST of mRNA_H-elongata_contig1093.756.1 vs. uniprot
Match: A0A8K1FF32_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF32_PYTOL)

HSP 1 Score: 181 bits (458), Expect = 1.600e-45
Identity = 145/462 (31.39%), Postives = 230/462 (49.78%), Query Frame = 2 
Query:  287 LPGGRTFGLSGSEQTHQPGIVITPEPGFVIKTRLVEEGIKVFVNVCHHDRIGDSGMVKKLDKDGTELEGLNIPMSVGPPWVDKDRAGEECIVYDVIIHPKAIEECQSDKTGARRDWLCHLAMQSVMTKHACKLDPKYKLPKLKFKGNKGTGPAPQRIRDDSAKPRISEVSQNGASASSPTKPSTAFSVKTTNNPNISTKRTISAPAMTA-LGAPITTVLWKNRGCEDTLRETDASTQLLEESVRSSAEEWPDSLQVSLGGFGQGVLIPDALAEVRVQVSAYEVIVKASGHHPLQRRLPYAVLTNSASAEANCHENTLVISILIDKMPLWREPDPGSKPWLLAHALGDGGASGQQELAVKIHETGKCAQRKREVNVDSLPEDRFHIKLRQDIEPFSGYGSTEGYVGTHSNRPRQEDA----PFSEGDQLPEDQFHKADIISQHVKDTREQQRREKIRRAEEER 1657
             PG +     G     Q G+ I  EPGFV+KT  + +  KVFVN C  D I      K+LD++G E EG+++P+S+G P   KD+ G+  + +DV ++ + IE+ ++DKTG+ R+++C LA++ +  K+  KLD +YKLPKL ++G     P P+     + KP I EV  +G+  ++ +  + A +V+T              PA TA L   +  V+   R     +   D +   L E V  SA     +  + L  F   V   D   +V +++    + VK +GH  L   LPY V   + +   +  +NT+ I + IDK     EPD GS PWLL  AL D  +  +  +  K          ++E    SL  D FH+ + +          TEG   + +    QE      P  E D+LPED+FH+ D++S H+ + R+++R+ K + AEE+R
Sbjct:   84 FPGNKVMASDGLS-AKQEGMYIDVEPGFVMKTTDIHKKRKVFVNFCFSDVIQTFSQRKQLDEEGKEQEGIHVPLSLGAPREVKDKRGDTALAFDVAVNTQVIEDSKTDKTGSFRNFVCELAIEYIDQKYQVKLDSRYKLPKLTYRGEL---PPPKHYIRKTQKPIIQEV--DGSKKATKSATTKAVAVET--------------PAKTATLQHELFDVVGDTRKPCTRVPAVDLNGSALSEEVLRSA----GTHLLVLFRFETAVASAD---DVELELRPEYLTVKVTGHQDLSLFLPYPVQVATTTVVLDRTKNTMEIRLAIDKSWGLNEPDVGSAPWLLTQALRDEDSDKKDTVDTK----------RKEEEPKSLV-DMFHLAMPK----------TEGSDASSTTPSTQEHTARWDPVDEDDELPEDRFHRRDMMSMHILEQRKKERQLKAQEAEEKR 497
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BLAST of mRNA_H-elongata_contig1093.756.1 vs. uniprot
Match: A0A329SY52_9STRA (PIH1 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SY52_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.750e-45
Identity = 157/498 (31.53%), Postives = 239/498 (47.99%), Query Frame = 2 
Query:  257 DRENPDETLHLPGGRTFGLSGSEQTHQPGIVITPEPGFVIKTRLVEEGIKVFVNVCHHDRIGDSGMVKKLDKDGTELEGLNIPMSVGPPWVDKDRAGEECIVYDVIIHPKAIEECQSDKTGARRDWLCHLAMQSVMTKHACKLDPKYKLPKLKFKGNKGTGPAPQRIRDDSAKPRISEVSQNGASASSPTKPSTAFSVKTTNNPNISTKRTISAPAMTALGAPITTVLWKNRGCEDTLRETDASTQLLEESVRSSA------EEWPDSLQVSLGGFGQGVLIPDALAEVRVQVSAYEVIVKASGHHPLQRRLPYAVLTNSASAEANCHENTLVISILIDKMPLWRE---PDPGSKPWLLAHALGDGGASGQQELAVKIHETGKCAQRKREVNVDSLPEDRFHIKLRQDIEPFSGYGSTEGYVGT---HSNRPRQEDAPFSEGDQLPEDQFHKADIISQHVKDTREQQRREKIRRAEEEREARKKNPQEGVEYVDFDGK 1714
            D  +PD     PG +  G  G + T + G+ I  +PGFV+KT  V+   KVFVNV + D I      KKLD +G E EG+++P+S+G P   KD+ G   + +DV ++ K +E+CQ+DKTGA R+++C LA++ +  K+  KLD +YKLP+L ++G     P P+     +  P I EV+ N A+AS  T  +T+                          AP T    K    E+        T+L   S  S        E+  D L +S+  F   +    A +++ +++ A  + +KA+ H  L+  LPY V  NSA    +   NT+ I++ IDK   W     PD GS PWLLA AL + G    +  A   +E  K           SL E  FH+    +        S +G  G        PR +  P  E ++LPED+FH+ D++S H+ + R  +R +K + AE +R  R+   +E  +     GK
Sbjct:   77 DTNSPDFKPRFPGDKVMGEDGLKATPE-GMYIDVKPGFVMKTTDVKNKKKVFVNVVYADEIQAFSEKKKLDDEGKEQEGIHVPLSLGAPHEVKDKKGVGSLAFDVAVNTKVVEDCQADKTGAFRNFVCELAIEYIDQKYKIKLDDRYKLPRLTYRGEL---PPPKHYIRKTQSPIIQEVATNKATASKKTGKATSXXXX----------------XXXXXXAPKTATA-KYELFEERNNSRTVCTRLPSVSKGSIPLSPEVLEQAGDRLVISVQ-FQNKI---QAGSDIELELQAELLSIKAAIHLDLEIFLPYPVEVNSAKVCLDQGRNTMEITLRIDKS--WNSVNGPDCGSAPWLLARALDEEGGDPNERPAKPANEKPK-----------SLVE-MFHLANAAE--------SNDGPFGNGLASKATPRWD--PVLEDEELPEDRFHRKDMMSMHILEQRRIEREQKAKEAEAKRNQRRAEVEEMQKKATEAGK 525
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BLAST of mRNA_H-elongata_contig1093.756.1 vs. uniprot
Match: K3WAQ8_GLOUD (PIH1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAQ8_GLOUD)

HSP 1 Score: 179 bits (454), Expect = 6.510e-45
Identity = 145/459 (31.59%), Postives = 231/459 (50.33%), Query Frame = 2 
Query:  287 LPGGRTFGLSGSEQTHQPGIVITPEPGFVIKTRLVEEGIKVFVNVCHHDRIGDSGMVKKLDKDGTELEGLNIPMSVGPPWVDKDRAGEECIVYDVIIHPKAIEECQSDKTGARRDWLCHLAMQSVMTKHACKLDPKYKLPKLKFKGNKGTGPAPQRIRDDSAKPRISEVSQNGASASSPTKPSTAFSVKTTNNPNISTKRTISAPAMTALGAPITTVLWKNRGCEDTLRETDAST-----QLLEESVRSSAEEWPDSLQVSLGGFGQGVLIPDALA-EVRVQVSAYEVIVKASGHHPLQRRLPYAVLTNSASAEANCHENTLVISILIDKMPLWREPDPGSKPWLLAHALGDGGASGQQELAVKIHETGKCAQRKREVNVDSLPEDRFHIKLRQDIEPFSGYGSTEGYVGTHSNRPRQEDAPFSEGDQLPEDQFHKADIISQHVKDTREQQRREKIRRA 1645
             PG +    SG     Q G+ I   PGFV+KT  ++ G KVFVNVC+ D I      KKLD +G E EG+++P+S+G     KD+ G   + +DV ++ + +E+C+ DKTG+ R+++C LA++ +  K+  KLD +YKLP+L ++G+    P    IR  +A P+I +V+ N A+ S+ T             P+  +  TISA A   L    T    KN   E+ L  T  +T     + L + +   A E+   L+V++  F   V  P+ L  E+R ++      VK+  HH L   LPY V  ++A    N  +  L +   +DK      PD GS PWLLA AL         E   +I E  K  + +++    SL E  FH++      P +        + +H+ +      P  + ++LPED+FH+ D++S H+ + R+ +R +K + A
Sbjct:   85 FPGNKVMEASGLA-AKQEGVYIDVHPGFVMKTSELKSGKKVFVNVCYSDEIQTFSQQKKLDDEGNEQEGIHVPLSLGALHEVKDKKGTTSLAFDVAVNTQVVEDCKIDKTGSFRNFVCELAIEYIDQKYKVKLDARYKLPRLSYRGD--LSPPKHYIRKVAA-PKIQDVTGNSATTSTKT---------VRKKPDQPSPPTISATARWELHEVTT----KNSNGEERLPCTRIATAEKDGKPLSQQILQQAGEF---LEVTIW-FQTPVESPEQLEIELRPELLG----VKSHAHHDLSIFLPYPVQVSAAQVALNWAKKNLTLRFRVDKTWGTENPDCGSAPWLLAQALHG------NEDGTEIREVTKGREEQKKPK--SLAE-MFHLE-----RPDARDAPQASAMTSHATKWD----PVDDDEELPEDRFHRKDMMSMHILEQRKAERDQKAKEA 500
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BLAST of mRNA_H-elongata_contig1093.756.1 vs. uniprot
Match: F0W8P6_9STRA (Uncharacterized protein AlNc14C36G3172 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8P6_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.250e-44
Identity = 141/515 (27.38%), Postives = 244/515 (47.38%), Query Frame = 2 
Query:   80 QMAEDAAKLASEQPEIFKALTQNKGVDSHLSAEREKSSPALVHQRKAMHAASQQSRTGGDRENPDETLHLPGGRTFGLSGSEQTHQPGIVITPEPGFVIKTRLVEEGIKVFVNVCHHDRIGDSGMVKKLDKDGTELEGLNIPMSVGPPWVDKDRAGEECIVYDVIIHPKAIEECQSDKTGARRDWLCHLAMQSVMTKHACKLDPKYKLPKLKFKGNKGTGPAPQRIRDDSAKPRISEVSQNGASASSPTKPSTAFSVKTTNNPNISTKRTISAPAMTALGAPITTVLWKNRGCEDTLRETDASTQLLEESVRSSAEEWPDSLQVSLGGFGQGVLIPDALAEVRVQVSAYEVIVKASGHHPLQRRLPYAVLTNSASAEANCHENTLVISILIDKMPLWREPDPGSKPWLLAHALGDGGASGQQELAVKIHETGKCAQRKREVNVDSLPEDRFHIKLRQDIEPFSGYGSTEGYVGTHSNRPRQEDAPFSEGDQLPEDQFHKADIISQHVKDTREQQR 1624
            Q A+   +L    P+ +K L     V +  S+    +S AL+    ++    ++ +   +  N       PG +     G  + +Q GI I  EPGFV+KT+ VE  +KVFVN CH + I      K+LD +G E  GL++P+S+GPP   KD  G   I YDV ++ K +++C++D+ G  R+++C LA++ +  K+ CKLDP+YKLP+L ++G     P P+        P+I  VS        PT+P T         P I+  +T        +   I      +  C   +   D    L EE +  + E+    + V L        I D    +++++    + V+   +H  +  LP+ ++ + A A  +    +L++++ ID +    +PD GS PWLLA+ALG               E  +   + ++ + +    D FH+K +Q++E          Y     +   +   P +E ++LPED+FH+ D++S H+ + R ++R
Sbjct:    7 QFADYLDELQHSDPKAYKDL-----VTTMQSSPNPSASSALLRDPGSLLQGLKEKKQDSNAANAPFVPQFPGSKVMDEDGLRE-NQKGIYIEVEPGFVMKTQNVETEMKVFVNFCHSEMIQSFSEQKRLDAEGIEQIGLHVPLSIGPPHQVKDMKGIASIAYDVGVNSKVVQDCKNDRIGTFRNFVCELAIEYIEKKYKCKLDPRYKLPRLTYRGEL---PPPKHYIRQQRSPKIEVVSD-------PTQPKT--------RPKITAVKTTQQLHSADVILEIEDENNSSFKCTR-IAAADGGNALAEEEL-ITMEKKKLKIYVRLHQESPACSIDD----IKIELQPEFIRVRIPHYHVYESFLPFPIVLSQAKAIFDPDRKSLILTLPIDTVWTTDKPDAGSNPWLLANALG-----------TTCDEETRSQDKAKQGDEEQSLLDLFHLK-KQELEA----DLRSEYPDVRWSAVEEAVDPVTEDEELPEDKFHRLDMMSLHILEQRRRER 475
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1093.756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNP4_ECTSI3.350e-16851.63PIH1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZG52_9STRA2.690e-9238.80Pre-RNA processing PIH1/Nop17-domain-containing pr... [more]
A0A7S2B8J4_9STRA1.590e-6532.28Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A6A3T0F9_9STRA5.490e-5031.56PIH1 domain-containing protein n=3 Tax=Phytophthor... [more]
A0A482SP74_9ARCH1.130e-4729.52PIH1 domain-containing protein n=1 Tax=archaeon Ta... [more]
G4YEG2_PHYSP9.190e-4730.85PIH1 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A8K1FF32_PYTOL1.600e-4531.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A329SY52_9STRA1.750e-4531.53PIH1 domain-containing protein n=2 Tax=Phytophthor... [more]
K3WAQ8_GLOUD6.510e-4531.59PIH1 domain-containing protein n=1 Tax=Globisporan... [more]
F0W8P6_9STRA2.250e-4427.38Uncharacterized protein AlNc14C36G3172 n=1 Tax=Alb... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1093contigH-elongata_contig1093:2260..17495 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score510.8
Seed ortholog evalue8.5e-142
Seed eggNOG ortholog2880.D8LNP4
Preferred namePIH1D1
KEGG koko:K12302,ko:K19751
KEGG TC2.A.1.14
KEGG Pathwayko04721,ko04723,ko04724,ko05033,map04721,map04723,map04724,map05033
GOsGO:0000491,GO:0000492,GO:0000976,GO:0001013,GO:0001046,GO:0001047,GO:0001067,GO:0001163,GO:0001164,GO:0001188,GO:0001932,GO:0001934,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005732,GO:0005737,GO:0006139,GO:0006325,GO:0006338,GO:0006351,GO:0006352,GO:0006355,GO:0006356,GO:0006360,GO:0006361,GO:0006364,GO:0006396,GO:0006403,GO:0006457,GO:0006725,GO:0006807,GO:0006996,GO:0008104,GO:0008150,GO:0008152,GO:0008361,GO:0009058,GO:0009059,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010466,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010605,GO:0010628,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010951,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019899,GO:0019900,GO:0019901,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023056,GO:0023057,GO:0030154,GO:0030162,GO:0030855,GO:0031056,GO:0031057,GO:0031058,GO:0031060,GO:0031061,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0031399,GO:0031400,GO:0031401,GO:0031974,GO:0031981,GO:0032006,GO:0032008,GO:0032268,GO:0032269,GO:0032270,GO:0032502,GO:0032535,GO:0032774,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033365,GO:0033674,GO:0034470,GO:0034502,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0035065,GO:0035066,GO:0035067,GO:0042254,GO:0042325,GO:0042327,GO:0042393,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043086,GO:0043154,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043281,GO:0043549,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0045859,GO:0045860,GO:0045861,GO:0045893,GO:0045935,GO:0045937,GO:0045943,GO:0046483,GO:0048254,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0051117,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051219,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051276,GO:0051336,GO:0051338,GO:0051346,GO:0051347,GO:0051569,GO:0051570,GO:0051573,GO:0051641,GO:0052547,GO:0052548,GO:0060255,GO:0060429,GO:0060548,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070199,GO:0070727,GO:0070761,GO:0070897,GO:0071168,GO:0071169,GO:0071704,GO:0071824,GO:0071826,GO:0071840,GO:0071900,GO:0071902,GO:0072594,GO:0080090,GO:0090066,GO:0090239,GO:0090240,GO:0090241,GO:0090304,GO:0097159,GO:0097255,GO:0097659,GO:1900109,GO:1900110,GO:1900112,GO:1900113,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901836,GO:1901838,GO:1901983,GO:1901984,GO:1901985,GO:1902275,GO:1902531,GO:1902533,GO:1902659,GO:1902661,GO:1902680,GO:1903432,GO:1903506,GO:1903508,GO:1904263,GO:1905268,GO:1905269,GO:1990837,GO:1990904,GO:2000112,GO:2000116,GO:2000117,GO:2000615,GO:2000617,GO:2000618,GO:2000619,GO:2000756,GO:2000757,GO:2000758,GO:2001141,GO:2001233,GO:2001234,GO:2001251,GO:2001252,GO:2001267,GO:2001268
EggNOG free text desc.axonemal dynein complex assembly
EggNOG OGsKOG4356@1,KOG4356@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPIH1 family
Ec32 orthologEc-08_006360.1
Exons12
Model size1939
Cds size1722
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1093.756.1prot_H-elongata_contig1093.756.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1093 2282..17300 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929620.544984-UTR-H-elongata_contig1093:2259..22811622929620.544984-UTR-H-elongata_contig1093:2259..2281Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1093 2260..2281 +
1691679094.2177687-UTR-H-elongata_contig1093:2259..22811691679094.2177687-UTR-H-elongata_contig1093:2259..2281Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1093 2260..2281 +
1622929620.7874024-UTR-H-elongata_contig1093:17300..174951622929620.7874024-UTR-H-elongata_contig1093:17300..17495Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1093 17301..17495 +
1691679094.3629522-UTR-H-elongata_contig1093:17300..174951691679094.3629522-UTR-H-elongata_contig1093:17300..17495Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1093 17301..17495 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929620.5768158-CDS-H-elongata_contig1093:2281..22901622929620.5768158-CDS-H-elongata_contig1093:2281..2290Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 2282..2290 +
1691679094.2328973-CDS-H-elongata_contig1093:2281..22901691679094.2328973-CDS-H-elongata_contig1093:2281..2290Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 2282..2290 +
1622929620.5920908-CDS-H-elongata_contig1093:2543..26881622929620.5920908-CDS-H-elongata_contig1093:2543..2688Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 2544..2688 +
1691679094.2419932-CDS-H-elongata_contig1093:2543..26881691679094.2419932-CDS-H-elongata_contig1093:2543..2688Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 2544..2688 +
1622929620.609503-CDS-H-elongata_contig1093:3592..37651622929620.609503-CDS-H-elongata_contig1093:3592..3765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 3593..3765 +
1691679094.2518353-CDS-H-elongata_contig1093:3592..37651691679094.2518353-CDS-H-elongata_contig1093:3592..3765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 3593..3765 +
1622929620.629059-CDS-H-elongata_contig1093:12573..127081622929620.629059-CDS-H-elongata_contig1093:12573..12708Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 12574..12708 +
1691679094.2749345-CDS-H-elongata_contig1093:12573..127081691679094.2749345-CDS-H-elongata_contig1093:12573..12708Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 12574..12708 +
1622929620.646969-CDS-H-elongata_contig1093:13212..133141622929620.646969-CDS-H-elongata_contig1093:13212..13314Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 13213..13314 +
1691679094.285657-CDS-H-elongata_contig1093:13212..133141691679094.285657-CDS-H-elongata_contig1093:13212..13314Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 13213..13314 +
1622929620.6658413-CDS-H-elongata_contig1093:13748..138761622929620.6658413-CDS-H-elongata_contig1093:13748..13876Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 13749..13876 +
1691679094.2935054-CDS-H-elongata_contig1093:13748..138761691679094.2935054-CDS-H-elongata_contig1093:13748..13876Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 13749..13876 +
1622929620.687837-CDS-H-elongata_contig1093:14361..145811622929620.687837-CDS-H-elongata_contig1093:14361..14581Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 14362..14581 +
1691679094.301621-CDS-H-elongata_contig1093:14361..145811691679094.301621-CDS-H-elongata_contig1093:14361..14581Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 14362..14581 +
1622929620.707375-CDS-H-elongata_contig1093:14867..150351622929620.707375-CDS-H-elongata_contig1093:14867..15035Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 14868..15035 +
1691679094.3102944-CDS-H-elongata_contig1093:14867..150351691679094.3102944-CDS-H-elongata_contig1093:14867..15035Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 14868..15035 +
1622929620.7197683-CDS-H-elongata_contig1093:15418..154811622929620.7197683-CDS-H-elongata_contig1093:15418..15481Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 15419..15481 +
1691679094.3190954-CDS-H-elongata_contig1093:15418..154811691679094.3190954-CDS-H-elongata_contig1093:15418..15481Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 15419..15481 +
1622929620.7346401-CDS-H-elongata_contig1093:15839..161251622929620.7346401-CDS-H-elongata_contig1093:15839..16125Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 15840..16125 +
1691679094.3279142-CDS-H-elongata_contig1093:15839..161251691679094.3279142-CDS-H-elongata_contig1093:15839..16125Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 15840..16125 +
1622929620.7518635-CDS-H-elongata_contig1093:16369..165511622929620.7518635-CDS-H-elongata_contig1093:16369..16551Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 16370..16551 +
1691679094.337787-CDS-H-elongata_contig1093:16369..165511691679094.337787-CDS-H-elongata_contig1093:16369..16551Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 16370..16551 +
1622929620.7690108-CDS-H-elongata_contig1093:17189..173001622929620.7690108-CDS-H-elongata_contig1093:17189..17300Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 17190..17300 +
1691679094.3513591-CDS-H-elongata_contig1093:17189..173001691679094.3513591-CDS-H-elongata_contig1093:17189..17300Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1093 17190..17300 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1093.756.1

>prot_H-elongata_contig1093.756.1 ID=prot_H-elongata_contig1093.756.1|Name=mRNA_H-elongata_contig1093.756.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=574bp
MAELMQLKETNPQEFETYVQMAEDAAKLASEQPEIFKALTQNKGVDSHLS
AEREKSSPALVHQRKAMHAASQQSRTGGDRENPDETLHLPGGRTFGLSGS
EQTHQPGIVITPEPGFVIKTRLVEEGIKVFVNVCHHDRIGDSGMVKKLDK
DGTELEGLNIPMSVGPPWVDKDRAGEECIVYDVIIHPKAIEECQSDKTGA
RRDWLCHLAMQSVMTKHACKLDPKYKLPKLKFKGNKGTGPAPQRIRDDSA
KPRISEVSQNGASASSPTKPSTAFSVKTTNNPNISTKRTISAPAMTALGA
PITTVLWKNRGCEDTLRETDASTQLLEESVRSSAEEWPDSLQVSLGGFGQ
GVLIPDALAEVRVQVSAYEVIVKASGHHPLQRRLPYAVLTNSASAEANCH
ENTLVISILIDKMPLWREPDPGSKPWLLAHALGDGGASGQQELAVKIHET
GKCAQRKREVNVDSLPEDRFHIKLRQDIEPFSGYGSTEGYVGTHSNRPRQ
EDAPFSEGDQLPEDQFHKADIISQHVKDTREQQRREKIRRAEEEREARKK
NPQEGVEYVDFDGKLILRKCPMS*
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mRNA from alignment at H-elongata_contig1093:2260..17495+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1093.756.1 ID=mRNA_H-elongata_contig1093.756.1|Name=mRNA_H-elongata_contig1093.756.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=15236bp|location=Sequence derived from alignment at H-elongata_contig1093:2260..17495+ (Himanthalia elongata Himel1 dioecious)
CGCTGACGCTATCGATATCGGTATGGCAGAGGTGCGACGCGACAAGCATG
GCGATATAGTTCTAGGCAGCAGTACAAAGCCTGTGTCTTAACGAGTATTA
CAAATATCGATTGAAGCCAATAAATATATTGTAATGAAGCCGATAACCAT
CCAACGATGTCAAGGATGTGGCCAGGCAATTTTTGTTTGCAGAAGTCCAG
GCAATGTTTGTTCTTTTGTCGTGCTCCGCGTGTTTTACTCTTCTACTCCT
GTCTATCTGAACTGAATGCTGGGTAATAAAACAGCTGATGCAGCTGAAAG
AAACCAACCCACAAGAATTCGAAACGTACGTCCAAATGGCTGAGGATGCT
GCTAAGCTGGCCTCAGAGCAACCCGAAATATTCAAGGCTCTTACGCAAAA
CAAGGGGGTCGACTCTCACCTGAGTGCGGGTGAGCAAAGCGTAGCAAATA
GGCAGCCGACAACCAAACCTTTTGATGTTCATTGTTGAACCTGTTCATGC
TTTTACTTGGAATACGGTACTAAACGTAACCCAAACCCTAACCGGAACCG
TTGAGCCAACTGTTGAGACTATAGGGAGACTATGCAACGGAGATCCCTCC
AACGCTGTTGCACTAGAGGAACTCCTGCTCAAATCGCTGATTTTGTTTTG
TTTTGGTTCCAGGGGCCTTTAGAAAACCTCTGCTCATACTATCGTATAAT
GAATTTTATTCACTCACAGGGCGGGGTCGACTCCCCGTTCAGTGCAAGGG
TTAGGGTTAGGGTTAGGGTACCATATTTATCTTTACGAGAAAAGTACGTT
AAGTCCGGATCATATCTCGTTGACGAAAAGTTCCTCGAGGAGATCCTGAC
GGACTGAAAACACAGAGTTATAAACTTGTTGCTCAGACACGAGGGTGTTG
AAACATGGCGCTTAGCATCGGGTATTTAACCCCTGTAACTCCAATTAGTC
GCAGGTGGCACTATGAATAGCCTTTCGGCCTTTTGCCCGCAGATCACGTT
TTCCCTTGTAAGAATGTACAGGTTGAACTTGAAGCGTAGCCCGAGTCATT
CAGTATTTTACCTGATTTAGAATGGGTAAGGAGGATGAACAGGCTGCCAC
GGGACGGGACGGCCGAACCCGTCTCGCGAGACCAAATTCTCAGGCGCGAA
TAGGAGCAGGGAAAATTGTGTTTCCTCTACAGCTGACCACGAGCAGAATT
GGCAACCATATCTGGTTGATCCATGCTAAAGCCTATATGTTATTTTTATT
TTATATTGTATAGCCTATATGTGATATGTAATGACGTCATCACCACACAT
GAGGATATTTGTCGATTGCCGTTCGTACTCAAGAGAGAGAGAAGTCGAGT
CCCGCGCTGGTGCACCAGAGGAAGGCTATGCATGCGGCCTCTCAGCAATC
CAGAACTGGCGGCGATAGAGAGAATCCAGATGAAACTCTCCATCTTCCGG
GAGGAAGGACCTTTGGCTTAAGTGGAAGTGAGCAAACGCATCAGCCGGGG
ATCGTGGTGAGCTTCGTACGTTACGCAGTTGTGTCCATGGTTTCCGTGGT
GTCCATCTCATTTGGTGGCTGTACAACAAGTACCGGTAGATGTACACTGC
AATACTTGACAGTACAGGACAACGAGGAAGGAAAACGTCTCTGGAAAAGA
AGGGCGTTGCAAAAAAATATCATGGGTTGCGAAAAACATTAAGCATTTTC
GGGGGCAGTCCGCCTGCACGAGTCTTTTTTCCTTAATTAATATTTCGTGT
CATCTTCCCAATCTGTTTAAGATTCTATCGCTGTGGCCGGGATTATGGTT
GTAATTAGGCGTTATGATTCGCGATCAGTGATTGGCTAAGCGTGTCGTGC
ATTAATGTATTATTCGTACTAACCGATCGGGCCACAAGCCTAACCCTAAC
CCTAAACCATTACTAACTACTAACTACTATACGCGGTTGCAAATCCGGTG
CATGATCTCAAAAAGGGACAAAGGTTAATTAGTCACATCTTGGTGATGCT
CCACTACGCACATAGCCATGTATCCGAAGTCGTGACAACACTCAAGTATA
TCCCCCCCGAGAACAGCTAAAAACAATATTAATACTATTAATAATACCCA
CATCGCGACTATAACCTAACCCTTCGATACGAACTACCGACAGCTTCTAT
TATCAGGTTACAGCCATCACTGTCATTATGTTCTTTGTGCGAAGATACCA
TCTGACAAAGGGCATATTTGAAGGGATATAGGTAGGCTCCACGTAGGCAA
GGCGTGCGACACTCACAAAGAATTACAACGTACTAGTGCAAGACAATTAT
CGAACCCTCCCGTTCCACATCCAGTAACAGTAACAGTAACAGTAACAGTA
ACAGTAACACGGGATATGGTGGTGCTTATTAGCAACCGAAGAATGGCGCT
TTTTATATGATAAAACCAACCATAATATCCCTAATTCCCTTAATGCCGTA
CAGAAGAAAGAAGGAAGAAAGGTTTACGGAGGTCCATGGCAGTAGACAGT
GGCGGCCTTGAGCTGTAAGGTCAGAGGAACGTCTTGAGCTGTGAAGTCGG
CGCACCGGCTAGCATCCACTCGTCCAACGCCCTCAACCCCCTCAAACCAC
TCACAAATATCCCAAGTTGTGCCCATTCGCCGTTACACGTTGCCTCTTGA
AGTAAGACATCAGACCGAGGCCAGATATCAGCTTTCCCTTTCAAGACCTC
CCGGTTTGCGCCTATAGAATTAGGGTTAGGGTTAGGATCAGGATTATAAT
TATCGCGCACAAGGGTCAAACCCTCCCTTGGCTCGTCGACGATCGAGCTT
CCCTCTAACGTCGTTGAATCTAGTTCTTACTCGCCTGATAAAACCCGCTG
GGTGTGCTGTTTTAACCGATCAGAGTTTCTGCGATAATGTCAAGTGTCTC
CGCGTGGTTCAGCGAACGAATTTGGGTTTCGGAAGCAGTGCACCTGATGA
AACCGCCACCATCTTGATACACCTGGTGAACACCATCTTGATACAACGAA
ACCGCCACCGCTTGTCAACCCACCATCTAAATTGGGCGTTCAGAAAGTTA
GTGTCGCCTCTTGAGGGTAAGTTGAGCCCTATACCCTATACTCTATACCC
TATACCCTATACCGCCGGAAAGACCCCTAAACTTATGCCCCAAAACCAGG
CTTCGGAAGGGAAAGGGCATGAGTCATGTACCGAAGTACAATGTAATTTA
TCTAAATAGTCTCAAGGGTTAGGGTTAGGTTTAGGGTTAGGGTTAGGGTC
CAACAAGAAAGACGGAAGAAGGAGTAAGTCGATTTCCTGGCGAGCAAAGT
TCGAGAGATCGAGCGATTGGTTTTCCAAGCAGCTAAAGTGACGACTTTGG
AGGGTTAGGTTAGGGATGTAAAACGATAAAATCACAGAGGGGGTTGGAGG
TTTATCGCCGCGTGGAGAAAGTGATATTGGAGGGAAATGCGGCGAGAATC
GACCAGAACAAAGAAGAGATATAGGGGGCCAATAAAGCTGTGAACGTGCG
GGGGTGCGAACTGTAGCACCCTGAACTCAAAGCGACTTCGCTTGCTTGAT
GTAGTGGACTTTACGGTAACAGCCTGTACTGTACTGCCCGAAGGGTGAAT
ACAGCCCCAACCCTAACCCTGTACTGGCACGAAACAGACACGATCGATAC
CGTTTAGTGTTAGTGTCTACGCATATAAAAATATAGCTCAGGGCTATTCT
ATTTATATTTTGTTTTCACGTTTGTACCAGCAGTGGGACTCTTGTAGACT
AATATATATATATATATTGATACGTCTCTCGGGTTGCATGTATTTTTTAT
TTCAAGCTTTTTTATATACGCTGCAACACCATTGCTTCCCTCTTTTCTTG
AAACATGTAGACTATATATTTACAAGACTCAAAAGTTCCTCCCCTGGACT
GCACCTCTCACGGTGCGGAGGGTTTAAATGCGTTCATTTGTTTTTTAAGA
TAAAGCACCCACGCCTTGCTCGGAATATTGTAGTACATCCTCAACCAGCC
TTCCTAGAAGACGCGGACCACAACGTGGTGGCTGGAAACGTCAAACTTCT
CAGACCATTTCCGTCCAATTATCCAATCCTAACATGTAACATCGTCCAAC
GGGATAGCCGGCGAGGCTACGCGTGGATCGTGAGTACATTAGACTTGATC
CTAACTCACATGCTGGAAATGTTCTCCGAACGGATCCACCCCACGCGAAA
GGTGGAGGTGCCAACATGGTGGATGCCTTCAACTGGATCTTGACGGTTGA
GGTATTAAGGTATTACCGCGTCCGACCCCAAGACGTTGGGGTCTTGAATG
GAGTGGGGATGCTCAGACAAAAGCGAGGCTTCAAAACTCAATGGAGGGTA
GAGCAGCTACATGGAAAACATTAGATAGGAATAGCAAGGACTCGCGACTC
CGGAGACAAGTTAAGGGCTGCGCAGCAACATCAAGCGCGTGCAGGCCTAG
GGTGTGCGGAGACTGTTCATAGCTTACATAGCTCACATAGCCTAGGGTGG
AAAAGTGCCGAGATGATGAAACGTGGCGAGAATAGGGGAATCTACGCGCT
TTTGAAGTCCCTAGACCTGGAGGGTTGAAGAGCGGTCCAATCACAGTATG
TGAAGATGGCAACTAATGCAGTAACCATCGGCCGCATCCCTCGAAGATAG
GGGATAGGGGATGAGCGAACAACGACGGAAGTGCAAAGCTTGGGTAGGGT
CGCTGGCCCATATAACGTTCGAATCGAGCTCCTTTAACTGGGGCTTCAGC
TTCATCTGAAACATGTAATTTTGGGCAAACTCCACCTGATTATAACGTGG
ATCTTGCGTGGAAAGCCGATGCCGCAGAAGTCGAAAGATGCTATCCTTAA
TGTACTGCACGAGAAGAGAGAGGACAGAGTGCAGCAACTATTGGAGTATC
GCTCTTGTTGCCCACGCGGGCAAGGTTCTTAAGGTGATAGAACAACGGCT
TGCCAACTACTGCGAAGCCGAGGGAATACTAGCTGAGAATCAATGCGAGT
TCCGGCCCAAGATATCCACCATGGAGATGAAGTTCGTCGTAAGTCGACTG
CGGGAGTTAAGACGGAAGCGTGGAATACAATTGTAGATGTGTTTCATCGA
CCAACCTTCAGAAAGCATACGACTTCGTTGAAGTTAATCGGCGCGTCCGG
CTGGTATGACTCCGTTTTGAGTGGTACAGCACAGAGCTGTACGACCGGCC
GCAAGCCAAACTCGAGTTCAAGGTACGGTTTCTAAGTGCTTGAGACCTTC
CTGTATGGATGCGCGATGTGGTCACTTCGTAAGGGGTTAAGGTATGATGA
GTAATAGTAATTAACAATTAAGGGAGAAATGAGAAGAACGGGGTTCGGGT
ATAAAAGCAGGGGTTTACTGTGGTGTTCACGAAACACTGTAGAGGAGTAA
CGAAACACAGTACCTGGTGCATACTATTAATAGTACATCTACAAGAACTA
TTAACACTTAGCATGGGGATCACGAACTACTGTACGTGGTACGTACATCT
ACAGAACACGGGTAATATGTAGTAAGTATGCATTCTATGGGATGTAAAAA
AACATGGCAAGTCAGTATAAGGTCCCGTTTTGGTACTTGTAATTATATAA
TTAGTTATGAAACATTTCCTATGGGACCCAGCAGTGATCGCGATTGTGCC
GCTTCGTGAATTGCATTGCAGAGTTTTACGCCATAAGAGTCCTAAAAGTT
GTTTGTGGAGTTCTGAAATTATACTCCGTATTTGCTGATTTTAGCTGGAA
ACTGTTGGGTTCCCGCCAAATCCTGCTGTGTACGAGTAGCGAAGCCCAGC
ATCACGGTGACGACTTTGACCACGGTGACCACTATCAACGTCTTCCCACC
AACTTCCAAGTCTTCCTTCTCCTCCAGGGTTAGGGTTAGTGTTACTGGTG
ACAACAGTAGTAATTTTTAAACTTTCATCCTTTTTCATCCCCGTGACACG
CCCGATTACTGCATAAGTACTGTTTAACTACTGCATAACAACTATGCTGT
GTAGACAGTGTCTAGCGTCTGTGAGCTAGTTACGCAGAAAATATTAACAG
TAGTAAAGGAGCATAGCAACACCAGCATAGAATCGAGGCGATATTAACAT
TTAAATGCTTTGGGCAAAGTGATGAAATATTTTTGCATCCAAAATGGAAA
ATATTATCATTACAATAGGATACGATTTGACCTCTTCGACGTGATGTACA
GAACCGAGGTCTCAATAGACGACACATACATGAAACTGAAATGTAGTAAC
TTGGCGTTTCTTCTCTAACTTAATTTATTGCGAATACCTAGTCCATTCAC
TTGGGGTGGGGTTAGGGTTAGGATCGTACCAGGCACTACTTGATGGATGG
ATTTTTCGTTTTATTTTCACGCCCTTTACAGGTAGACCCTAACCCATACA
ATATATAATCTACCAGGTATATTATAGCACCCTGACTAGAGTTTCATCAT
TCGAACATTGAATGAACTGAACTTAATTTGCACATATATGTAGCCTCTGG
TCCTGGTCTATTAACAGTCCCGTCGTAGTGACGTCAGCAGCGGAGCAAAG
GTGAACATAAATATAAACAAGACAGCTCCCACTGCTTTGCAGAAGTCGAA
TTTAGAGAGAAAACGCGACGCGAAGGTGGCTACGACGAAGAAAATACGCA
AATGGAAAACGGGTGTTCGATTCCCCATCCACCCCTTATTATCATCATCA
TACCTTGTCCAATAATTTGGGTGGCATGAATGGTATAGGCTATCAATTGA
TATGGGCAAAGTAAACATATACGCTGTGTAGTTAAGTCTCGCCCAATACC
TGCAGTAGCCCGCGCCTCACTGAACTTTCCGACAATACACTTTATGGACA
TTGTTCATGAGTAGGAGACTATATTTTTTTCGAAGAAAAAGGGGGTGAAA
CCTGTTGAGAAAAAAAGTAAGTTCATCATTGACGATGGTGTTTAAACGAG
GATGTAATCCGTACTGCGAGGTTTACGGCCTCTCGCACAGATATATATTC
AAGGTAATTTCAACAGAAATAGCCCCTTCAAAATTGTGGGGACCATGAAT
AACACAGGATGATTGGTGATCAGATGGCGACCTGGTAATAATGAGTCGCT
GGAGGCGGGAGAAGACTAACGAATACGACATCCTTTTCACTTCGCCCTAA
AAGTAATAAATAAAGGCGAATTCGATATATACAATGAAGCCTCGCCCAGT
ACCTGCAGTAGGCTGCGTTACGCTGTTTTTTTCACTTTATTCTACCCGTT
TTTATCCTCAGCGTTTGCACTATAGATTGCACCCAAAGTGCAAATATGAT
AACTTCTCCCTAAAGGTGTAAATACGGGTACCCTCAAGTAGGCTTCGCTC
TGTATGGAGCGTTAATTATGTCAAGAGGGGTAGCAGGTCGTCGAAGTATA
TTTGGCGGATAGCCCTTACGTCGTAGGCTAATGTGCGGTTTAGTTGCAGA
TCAAAACATATCAAATGAGCTTCGGTGTCATTGCCGATGTAGTTTCTTAT
CCCATCCCTAATATACAGTATGGTAACAAGGGTAGCATCTATCGCGTAAC
CTACGGTTGGTGTGTTTTTGGTGCGAAAGTAAATTAGCCAACGCACTTTC
CAAAATAACAGTATCTGAGTACATATTTCCTAAAAGACCACCAGCCTCAT
ATTTTTCGCGTTTTTCTACATCAGACTAAAAGTCCCGTAGGAGTAAATTA
AGTGTTATCTATATCGTAGCGTTTTTTGTAGAGCATAACCAAAGCTTCAT
AGGTAAGTTATGAGCATGCCTGCTTGGCGGTCGGGGAAAAGAGAAAGGGG
TGGTGGGCTGTCATTAAAAAAACAATTGCCTCTTACCCATTCTCGTAAAT
TTTCTGATTCAGAGCGAAATTATAGCCCACACACTTTAAAAATAAACTTT
AGCAGTGTACTTCATTCCTCAAATACCACCATTTTTTGGTGGGCCGGACA
GTGCAAACAAAAAAATGCTAAGCACTCTATTGATGAAAAAAAGGCGTAAG
AGCTGTTTTTTTTGTCGTGTTGATTTTTGCCGAGCATAGCCCTAAAGCTC
TATAGGTGAGCTACGGGTGTCGCTTGCTGAACTCCCTTGTGATGAAGAGA
GAGTAAGCGGACTGCTATTTTCCATCTTTATTCTCTTACGCACGATTCTA
ACGTTTTTGTTAGGAAGAATTCGACCCACACGATTTCCAAAGCAATTTTA
GCAGTGTACATATTTTCTCAAACGAGACGGGTAAGTGGTTTGCTGGACAG
CAGGAACAAAACGAAAACCTCTACTAAGGCCTATCAAAGAGCACCGACCG
GAGAGCCAATCCTAGCGACGTCGCTGCGGGGCATGCTATACGCTAACATT
GCTGGAGTCGTCTCGTAATCGCTGGAGCAGCTCAGGAAAATTATGGGTGT
GACTGTGATCGTGTGTGCGGCTTTTGGTCTCACCGTATCGGAAGCCAAGA
CTGAAATCGCTTTTTTACGCACGAAGGGGATGCCGAAGGCCACCGCTACA
TTCAACGTCGAAGCAGCCGGCCAGGTGTAAAACCAATCGAACAAGCTTGT
ATACCTCGGTGAACGTTAACCACTACGCCAACCTGCCCATCGAGGTCGAC
CGGTGCATACGCAAGCATGGTACAGCTTCCGGAAGTGCACCCTTGATTTG
CACGACTGACCGAACGCTCCCCTCGATCCCAAAACGTGTATGCTGAAAGC
CGAAGAGCTTGAGGCAATGCTGTACGGCTGCGTCACGTGTAGCCCGCGCG
CGTGCCACTGCGACACGCCACGCCGAGCCTATCTATCACAGCTTCCTGAC
TCGCTCCATCGGTTGACGGAAGGATAATCCTACTGACCACCCGATCTTCT
ATCTCGATACCCTCATGAAGACGGGGTGTGAGAGCATCGAGGCGATTATG
CGCAGGAGGCGAATCTTATTCGCGGGGTTTGGCGCGCAGAGATGACACGA
GACTTCTGAAATTCGAGATGGTCGGAGAAATAATGAGGGGCGCGGGTTGC
GTGAGATGGCAAGAAAAAGAGCGGATGTGGTATCGTCTGGACGATGTCAA
AGTTTACGCCGACGTGGGTAATTGCAGCCCAGGACGAGAGGAATGGCACA
ATACGGCGGAAAAATGAGCGGGACGTTTCATGGCGAAATGGATCGCTTTA
AATAGAGTCCGGGCTGTACTACGGCATGCACTAGCATGTCCAAACATGAG
GGGAGTGACCAAGGAGAGGACAGCCCAAAGCAAGTGTGCTCGTGCTGATT
CACTCGCCATAGTTGATTAGCCACAAGTGGCGCGAAGTAATATCTCCCGG
GCGTTTTGTTTGCCGATGCCATATTGATTTTCTCTGGCGTTTCGTTTTTT
TCTTTGTTTTTTTTTGCGTTTCTTTGTTTAGTTTTCGTCTCTCTGCTTTC
AGTGAATCCGCGACTCTTCGTTCAATCATTGTCTGATAGACATGCTTCCC
GTCAGCCATACGCAGTTAGTTAGCAAACCATGCGTCCTCTTTTTTGTTTC
TTCAGCGATATCGCTCTTTCCGAGTATTATGCACCATTGATGCTTTCTTT
TGTATGGAGATATATTGTACGTTTTCCTTTCTGATGGTGTTCTTTCTACC
TTGTGACTACTGGCTGGGTTTTCAGATCAGCTTATGTGATACTTACCCGA
AAAATCAAAATGTGGATGATCACAACTTGACCCGAAGAGCCATATCTCAG
TTTTATCACGAGGGATATTTAAGTGTTGTCAAAATGTTTTAAATTTGATT
ACAATGTCTCACCTTGAGTCTGTATAGGGATTGATAAAATATTATGATTG
ATGTGCTTTTAGCGCATATCGAAGTACATGCAATAATTTAAAGCTATTTA
TTTGAGTAACGCAGCAATTTCGATGTCAAAAGCACAACCCCTTTCGTGAA
GCTTTGATCACTGCAGAACTACTGATGGAATGTTGAAGACGAATGTCTAC
GACGACTCTCCAGAATCGACCAATTTCAAAGCGCAACCTGTAATGCAGCC
GTAACTCGGAGAGCTTCAGATCGAGATCCACAATTTCATAGTTCACGTGT
ATCTAGTGCTAGACCACTTGCAGGGTGTGCGACCACGAGCACCTGTTTCG
ACTGTCAATGATATTTCTCTAGCTCTAGCTCTAGCCATACACTTTGACTG
CAGTTAGAGCATGACCTCGTCGTCGGTCCGACTGTGCCATATCATTCAAT
CATTCAACTTTATGGAAATAAGGCTTCCATTCATTTTTTTTTCCATACTA
CAATGCACGAGTGACGATCTCGTTCCCAACCCCTGGCGCGTCTGGTGGTG
CATGGGGCTAGCAGATCACGCCAGAGCCGGGCTTCGTGATAAAGACGCGG
TTAGTAGAAGAAGGTATCAAAGTTTTTGTGAACGTATGCCACCATGATCG
AATCGGAGACTCTGGGATGGTGAAGAAGCTAGACAAGGACGGGACTGAGG
TGCGCCAATCAACAGTTCACCCATCCGCGGGTGAAGGAGTGAGAATATTT
TGCCGTTGCTTTGTTTGAAGGTACTACACATGAAGTACTTTGTACGATGC
AAAGTTCCTCGAGGTGTTTCACTACCTCATTTTTCCAATATAATTTGAGA
GCTCAAGGATAGTATTTACTTCAAACGGTTGTGCTCCTTACAGCACGGGT
CGCTAGTGGGTGGCACTCATGGTCCAGACATGAGCATCACGTGGGTTCGG
AAGAAATGGAACGCGGTAAAACTGAAACTGCACCATTCTCGGAGAAGTAG
TTCGATTGATCGATTGAGTAACGTCAAAGTACGCACAAAATATTATCTGT
GTGTTTGATGCTTTATGTTTCGATGTTTTCCTTATATTCGCTGTGTCCGA
GATGTTAGATACGGAGTTGTCTCACCTGCGCGTTTCTCTGTGGGTTACTT
AACTTCACTGCACCATGGCGTATGGCGGCGACGGTGAGGATACACTTTGG
CAGCTGGAGGGACTGAATATTCCGATGAGTGTTGGGCCTCCGTGGGTCGA
CAAGGACAGGGCCGGGGAGGAGTGTATCGTGTATGACGTCATCATTCACC
CCAAGGTACCGCCACTCTTCCACAAAAGATAATGCGGAAAAAAGAAAGGG
AAATACCGAAGGTGGATCCGACAAAGATCGCGCGGGTTTTCGGCTTCAAA
TCCATCACTCCTCTAATATCAAATAATTTATTCGCGTGACAAGAGAGCTG
AATGAAGACAAAGCAAAAATTGGAAGCACTGCATCTAGAGCTATCCATCG
AACTACTTCCAGTGCCAGCTTCTGCACCATCGTTTATAGTCCTCCTCGCC
TCCTCGCTGGATTCGAAATATACATAATCACCACCGAGTAAGTTTGTAAA
TATTTCCGCGGTACTTCTTGAGAAGTGGCAACCGCACCCCATAACTACTC
CAAATGAAGATCGTGCTGAATCGTGCCTGTAATAGTGTCCGATTGTGATT
CCCAGTGTCATGATATTTGGCGCTGAATCCTTTTCGCAGGCTATCGAGGA
ATGCCAAAGCGATAAGACGGGGGCGCGTCGAGATTGGTTGTGCCACTTGG
CCATGCAATCCGTCATGACGAAGCACGCCTGCAAACTTGATCCCAAATAT
AAACTGCCGAAGCTGAAGTGAGTGTTCTGTACCTTGTTTCTCTTTTCATA
TGATATGCATAATACGACGGTATTATTACTACACTTTTGGATGTAAATAT
GTAGCTATCTGCTCTATATTTAGGGCAACGGAGTCCTATCGTTGCACCCA
TGATGCGACCTAGGACGCAATTTCTCGATCTCTGTTCGTTCGCATAATCC
ATATAACTTCAAATACTATACCTGTATCACTGTCTAGAGCTAACCCATAA
TGTAATAAACTCTACAAATAACCCCTACAATACTGTTACGTTACCAATAT
ACCCTGTACGCGTCCATTTTTGGCATCTACCGGCGCGTGGCTCGGGTTCC
AGCGTAACTGCCAAATTACCGTCTTGCTTTCTTTGGTCCGGACTCCTAAT
ACTACATCATACGAGTAATACTAGATCGTCTACGGCACTTAATCCTCTAC
TAAATTTTCTATTGTCCCACTTCCGATACTTCTTTTATCCTTCCTTATGA
AGGTTCAAGGGGAACAAGGGAACCGGTCCAGCGCCGCAGCGAATCAGAGA
TGACTCGGCTAAGCCTCGGATTAGCGAGGTGTCGCAAAATGGCGCGTCGG
CGTCATCACCTACGAAACCCTCAACCGCTTTTAGCGTCAAAACAACAAAT
AATCCCAATATTTCCACGAAGCGGACGATTTCCGCACCGGCAATGACTGC
TTTGGGTGCTCCGATCACTACTGTGAGCACGACGTCGCTTAGTTTAATCA
GGTCTCAAGTGTTTTGGAGGCCAAAACATACTGTTTTGTTGCTATCTTGC
CTTTTTGCTTTGTGTATCAGAGATATCGACCGCATAGCTCTAGTAGTAGC
TTGAATCGTTTTCCACCTCACGCCTTGTGATGAGATTGGATTGGCAATAT
CTACACTAAAACTCACAACGCTCGCCCTAAACGGTGCTTGGAGATATTGC
CTACCCCTTTAAACCCCAAGCCAACACAATTCAGTCAGTTGCTCCCACGG
CATCGCAGGTGCTGTGGAAGAATCGTGGCTGTGAAGACACCCTGAGAGAA
ACTGACGCGAGTACACAATTGCTGGAGGAATCTGTGCGATCATCGGCGGA
GGAGTGGCCGGACTCGCTCCAGGTTTCTTTGGGAGGGTTTGGACAGGGAG
TGCTCATCCCAGATGCTTTGGCGGAGGTGCGCAGCTCTTCTCGCGCTCTG
TCACAACCACTTTCACAAACACGGTCATAAGCACTATAGCAGCCCCTCTC
ACAAGCATGGTCATAATCACTGTCACAATCACTGTCGTAATTCACGTATC
ACATCACGGGCATAAGTAATGTCACAAGCATTGTGACAAGCCCTGTCACA
ATCACTACTGTCCGAATCACCGTCACAACCACTGCCGGCAGGTACATTCG
GAATCACTTCCAATCTCTCGAAAAAATATTTTTGTAACTCCGTATAAAGG
GTTGGGGCTTGCTGATCCTCCTGCTATATAATGTCAAGGTGGCCAATTCT
CCCAGAGAAAAATAAATGACGATTTGCAAAAACTGATTCCACCTTGTGCT
TCGCTGTAGGTAAGAGTGCAGGTCTCAGCATACGAAGTCATCGTCAAGGC
TTCTGGCCATCACCCCTTGCAGGTGATACCCGATGGTGGCTACGACTAGT
CTACCCCTATATGTTTCTGACACTATCCTCGACGGTGGTGCTTCAAATAG
AGAGGATGTTCCTAATCTGGTTGTATCTGCAGTGTACCTTTTTCGTAAAG
GCACACGCATGCCCCCAGTGGTAGTGTCGTTGTTAGCCCTAGAGAACTGC
TACGATATTCCTTTGAAGCTTACTGGAGGGAGAGAGGCTGCCGAGTCGTT
ACTTACGAGAGACACACGCTAGCGGGTTTTGTGACCACGGGGCGCTTAAA
CATTGGATATCTTAGAAACGATCATTATTGTCTTTCGCGTCGTCTATCTT
ACGTTTCATGACGACGTTCTTCGTGGTCAGCGACGTCTACCTTATGCAGT
GCTCACGAACAGCGCATCTGCCGAAGCAAATTGTCATGAAAATACGCTGG
TCATCAGCATACTGATTGACAAGATGCCTCTCTGGAGAGAACCCGATCCG
GGATCCAAACCTTGGCTGCTTGCACACGCTCTTGGCGATGGCGGTGCCAG
CGGGCAGCAAGAGTTGGCGGTGAAGATACACGAGACAGGAAAATGTGCTC
AAAGGAAGAGGGAAGTAAACGTGGACTCCCTGCCGGAGGATCGCTTTCAC
ATCAAATTACGCCAAGGTTAACTCTAGTTCTAGACGACGTTCAAACTTAC
TGAGTCACTCGTAACGTGCGCATTATGGGAAAAATGCTTGACGTCATCGC
TCTGGATCCCACCCATCATCCTTCGTGACATGGTTTTTGCATAAACGCGC
ATTACCGTGTTGTGCTTTCCTGAATTATGGGAGTTAACATCCTTCGGAAC
TTGGGTGACGGTCTTTGCATGTTATTTATCGTAATGCAATTCCTGGTGCT
CCTGAATCAGACATAGAGCCTTTCTCGGGTTACGGGAGTACCGAGGGTTA
CGTGGGTACCCATAGCAACCGACCGCGTCAAGAAGACGCACCGTTTAGTG
AAGGAGATCAACTGCCCGAAGACCAATTCCACAAGGCCGACATCATATCA
CAACATGTCAAAGACACACGAGAACAGCAGCGACGGGAAAAGGTCGAGCA
ACACAGGCATCCTTGACCCCAGATGTCTTCGATTATTCTACCATGGGTAG
CTCTAGAAATCGATACTACGCTAGCCTCCAATGTACAGAGATATCAGATT
TATGGGGGTTTAATCGCATCTCGCTCTTCATGGCTCCGTATGCGTTGTTC
GGCGTAGTCTTACCGAATAGATCTCGATGTGCACGAAAGGTGGCGTTTGT
ATCTAACTGTAACGAATTATCTCGTGAGACCACCGAGTCACAATTGCTAT
ACCAGGATATGTATTATAAACCTCCGCGAGTCCAGTCTCTCACGGCGTAC
AAAGTTGATACTATAGAGTCGGAAATTATTTCACTAAAATAAAACAATGT
CCATTGAATGAAAATAATACCCGATATTGATACACTTCAGTGTGAGATAA
GTCATCCTGAAAAAGTAAATTATGAAAGGTGGATTTAAGAAGCTGTTTAT
TTGTTCAGCTGAGGTTGTCTCTATTAATAGCGTTTGCGGGTGCCTTGACG
TTTCGGAGCTCTAGGTGTAGGGTTCGAAGTGTCTTCGATATGATAATTTC
AGCTTTGAATATCCAATGCACCGCAACGCATCGCAACTCTTTCAAGTGCA
CGGCGTGACTGATAAATACTGCCGCCGCAGATTCGACGCGCGGAGGAAGA
GCGCGAGGCGAGAAAGAAGAACCCACAAGAAGGGGTGGAGTACGTAGACT
TTGATGGTAAGCTCATTTTACGTAAGTGTCCCATGTCTTGATGACATTGG
TGGTAAGCAAATACTACGTGGTTGTTAATGTCATGTTTATTTCTCATGCT
GATTTTATTCTTTCATCATATTCATGTCATGTTCATGTCATGTGTTTGGG
AGCGCGATGGTCTAGGCAGTGATATATGCGGGTTATTATCCTATCTCCAC
TCTACTGTGTAATCCAGTGTGTTAGCCCTTCGTCAT
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Coding sequence (CDS) from alignment at H-elongata_contig1093:2260..17495+

>mRNA_H-elongata_contig1093.756.1 ID=mRNA_H-elongata_contig1093.756.1|Name=mRNA_H-elongata_contig1093.756.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3444bp|location=Sequence derived from alignment at H-elongata_contig1093:2260..17495+ (Himanthalia elongata Himel1 dioecious)
ATGGCAGAGATGGCAGAGCTGATGCAGCTGAAAGAAACCAACCCACAAGA
ATTCGAAACGTACGTCCAAATGGCTGAGGATGCTGCTAAGCTGGCCTCAG
AGCAACCCGAAATATTCAAGGCTCTTACGCAAAACAAGGGGGTCGACTCT
CACCTGAGTGCGGCTGATGCAGCTGAAAGAAACCAACCCACAAGAATTCG
AAACGTACGTCCAAATGGCTGAGGATGCTGCTAAGCTGGCCTCAGAGCAA
CCCGAAATATTCAAGGCTCTTACGCAAAACAAGGGGGTCGACTCTCACCT
GAGTGCGGAGAGAGAGAAGTCGAGTCCCGCGCTGGTGCACCAGAGGAAGG
CTATGCATGCGGCCTCTCAGCAATCCAGAACTGGCGGCGATAGAGAGAAT
CCAGATGAAACTCTCCATCTTCCGGGAGGAAGGACCTTTGGCTTAAGTGG
AAGTGAGCAAACGCATCAGCCGGGGATCGTGAGAGAGAGAAGTCGAGTCC
CGCGCTGGTGCACCAGAGGAAGGCTATGCATGCGGCCTCTCAGCAATCCA
GAACTGGCGGCGATAGAGAGAATCCAGATGAAACTCTCCATCTTCCGGGA
GGAAGGACCTTTGGCTTAAGTGGAAGTGAGCAAACGCATCAGCCGGGGAT
CGTGATCACGCCAGAGCCGGGCTTCGTGATAAAGACGCGGTTAGTAGAAG
AAGGTATCAAAGTTTTTGTGAACGTATGCCACCATGATCGAATCGGAGAC
TCTGGGATGGTGAAGAAGCTAGACAAGGACGGGACTGAGATCACGCCAGA
GCCGGGCTTCGTGATAAAGACGCGGTTAGTAGAAGAAGGTATCAAAGTTT
TTGTGAACGTATGCCACCATGATCGAATCGGAGACTCTGGGATGGTGAAG
AAGCTAGACAAGGACGGGACTGAGCTGGAGGGACTGAATATTCCGATGAG
TGTTGGGCCTCCGTGGGTCGACAAGGACAGGGCCGGGGAGGAGTGTATCG
TGTATGACGTCATCATTCACCCCAAGCTGGAGGGACTGAATATTCCGATG
AGTGTTGGGCCTCCGTGGGTCGACAAGGACAGGGCCGGGGAGGAGTGTAT
CGTGTATGACGTCATCATTCACCCCAAGGCTATCGAGGAATGCCAAAGCG
ATAAGACGGGGGCGCGTCGAGATTGGTTGTGCCACTTGGCCATGCAATCC
GTCATGACGAAGCACGCCTGCAAACTTGATCCCAAATATAAACTGCCGAA
GCTGAAGCTATCGAGGAATGCCAAAGCGATAAGACGGGGGCGCGTCGAGA
TTGGTTGTGCCACTTGGCCATGCAATCCGTCATGACGAAGCACGCCTGCA
AACTTGATCCCAAATATAAACTGCCGAAGCTGAAGTTCAAGGGGAACAAG
GGAACCGGTCCAGCGCCGCAGCGAATCAGAGATGACTCGGCTAAGCCTCG
GATTAGCGAGGTGTCGCAAAATGGCGCGTCGGCGTCATCACCTACGAAAC
CCTCAACCGCTTTTAGCGTCAAAACAACAAATAATCCCAATATTTCCACG
AAGCGGACGATTTCCGCACCGGCAATGACTGCTTTGGGTGCTCCGATCAC
TACTGTTCAAGGGGAACAAGGGAACCGGTCCAGCGCCGCAGCGAATCAGA
GATGACTCGGCTAAGCCTCGGATTAGCGAGGTGTCGCAAAATGGCGCGTC
GGCGTCATCACCTACGAAACCCTCAACCGCTTTTAGCGTCAAAACAACAA
ATAATCCCAATATTTCCACGAAGCGGACGATTTCCGCACCGGCAATGACT
GCTTTGGGTGCTCCGATCACTACTGTGCTGTGGAAGAATCGTGGCTGTGA
AGACACCCTGAGAGAAACTGACGCGAGTACACAATTGCTGGAGGAATCTG
TGCGATCATCGGCGGAGGAGTGGCCGGACTCGCTCCAGGTTTCTTTGGGA
GGGTTTGGACAGGGAGTGCTCATCCCAGATGCTTTGGCGGAGGTGCTGTG
GAAGAATCGTGGCTGTGAAGACACCCTGAGAGAAACTGACGCGAGTACAC
AATTGCTGGAGGAATCTGTGCGATCATCGGCGGAGGAGTGGCCGGACTCG
CTCCAGGTTTCTTTGGGAGGGTTTGGACAGGGAGTGCTCATCCCAGATGC
TTTGGCGGAGGTAAGAGTGCAGGTCTCAGCATACGAAGTCATCGTCAAGG
CTTCTGGCCATCACCCCTTGCAGGTAAGAGTGCAGGTCTCAGCATACGAA
GTCATCGTCAAGGCTTCTGGCCATCACCCCTTGCAGCGACGTCTACCTTA
TGCAGTGCTCACGAACAGCGCATCTGCCGAAGCAAATTGTCATGAAAATA
CGCTGGTCATCAGCATACTGATTGACAAGATGCCTCTCTGGAGAGAACCC
GATCCGGGATCCAAACCTTGGCTGCTTGCACACGCTCTTGGCGATGGCGG
TGCCAGCGGGCAGCAAGAGTTGGCGGTGAAGATACACGAGACAGGAAAAT
GTGCTCAAAGGAAGAGGGAAGTAAACGTGGACTCCCTGCCGGAGGATCGC
TTTCACATCAAATTACGCCAAGCGACGTCTACCTTATGCAGTGCTCACGA
ACAGCGCATCTGCCGAAGCAAATTGTCATGAAAATACGCTGGTCATCAGC
ATACTGATTGACAAGATGCCTCTCTGGAGAGAACCCGATCCGGGATCCAA
ACCTTGGCTGCTTGCACACGCTCTTGGCGATGGCGGTGCCAGCGGGCAGC
AAGAGTTGGCGGTGAAGATACACGAGACAGGAAAATGTGCTCAAAGGAAG
AGGGAAGTAAACGTGGACTCCCTGCCGGAGGATCGCTTTCACATCAAATT
ACGCCAAGACATAGAGCCTTTCTCGGGTTACGGGAGTACCGAGGGTTACG
TGGGTACCCATAGCAACCGACCGCGTCAAGAAGACGCACCGTTTAGTGAA
GGAGATCAACTGCCCGAAGACCAATTCCACAAGGCCGACATCATATCACA
ACATGTCAAAGACACACGAGAACAGCAGCGACGGGAAAAGACATAGAGCC
TTTCTCGGGTTACGGGAGTACCGAGGGTTACGTGGGTACCCATAGCAACC
GACCGCGTCAAGAAGACGCACCGTTTAGTGAAGGAGATCAACTGCCCGAA
GACCAATTCCACAAGGCCGACATCATATCACAACATGTCAAAGACACACG
AGAACAGCAGCGACGGGAAAAGATTCGACGCGCGGAGGAAGAGCGCGAGG
CGAGAAAGAAGAACCCACAAGAAGGGGTGGAGTACGTAGACTTTGATGGT
AAGCTCATTTTACGTAAGTGTCCCATGTCTTGAATTCGACGCGCGGAGGA
AGAGCGCGAGGCGAGAAAGAAGAACCCACAAGAAGGGGTGGAGTACGTAG
ACTTTGATGGTAAGCTCATTTTACGTAAGTGTCCCATGTCTTGA
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