mRNA_H-elongata_contig109299.755.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig109299.755.1 vs. uniprot
Match: D7FM44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM44_ECTSI) HSP 1 Score: 275 bits (702), Expect = 1.340e-85 Identity = 130/137 (94.89%), Postives = 135/137 (98.54%), Query Frame = 1
Query: 16 QDAIKGAEAQRVLGMHLTDERIEGFCKVSVCENVTESAVTVMHHAGIGSLQPNTVLFAWPDDWSKNYEKGERFVSMLRGAVNARKAVMVLKGDKKLPTPVNPARAGQTIDIWWVAKDGGLLLLVPYLLKLHVLWKRC 426
+DA+KGAEAQRVLGMHLTDERIEGFCKVSVC+NVTESAVTVMHHAGIGSLQPNTVLFAWPDDWSKNYEKGERFVSMLRGAVNARKAVMVLKGDK+LPT +NPA AGQTIDIWWVAKDGGLLLLVPYLLKLHVLWKRC
Sbjct: 428 EDAVKGAEAQRVLGMHLTDERIEGFCKVSVCQNVTESAVTVMHHAGIGSLQPNTVLFAWPDDWSKNYEKGERFVSMLRGAVNARKAVMVLKGDKRLPTRLNPATAGQTIDIWWVAKDGGLLLLVPYLLKLHVLWKRC 564
BLAST of mRNA_H-elongata_contig109299.755.1 vs. uniprot
Match: A0A6H5L1Z6_9PHAE (Ccc protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z6_9PHAE) HSP 1 Score: 275 bits (702), Expect = 2.670e-84 Identity = 130/137 (94.89%), Postives = 135/137 (98.54%), Query Frame = 1
Query: 16 QDAIKGAEAQRVLGMHLTDERIEGFCKVSVCENVTESAVTVMHHAGIGSLQPNTVLFAWPDDWSKNYEKGERFVSMLRGAVNARKAVMVLKGDKKLPTPVNPARAGQTIDIWWVAKDGGLLLLVPYLLKLHVLWKRC 426
+DA+KGAEAQRVLGMHLTDERIEGFCKVSVC+NVTESAVTVMHHAGIGSLQPNTVLFAWPDDWSKNYEKGERFVSMLRGAVNARKAVMVLKGDK+LPT +NPA AGQTIDIWWVAKDGGLLLLVPYLLKLHVLWKRC
Sbjct: 622 EDAVKGAEAQRVLGMHLTDERIEGFCKVSVCQNVTESAVTVMHHAGIGSLQPNTVLFAWPDDWSKNYEKGERFVSMLRGAVNARKAVMVLKGDKRLPTRLNPATAGQTIDIWWVAKDGGLLLLVPYLLKLHVLWKRC 758
BLAST of mRNA_H-elongata_contig109299.755.1 vs. uniprot
Match: A0A835Z2U9_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2U9_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.440e-54 Identity = 88/137 (64.23%), Postives = 106/137 (77.37%), Query Frame = 1
Query: 16 QDAIKGAEAQRVLGMHLTDERIEGFCKVSVCENVTESAVTVMHHAGIGSLQPNTVLFAWPDDWSKNYEKGERFVSMLRGAVNARKAVMVLKGDKKLPTPVNPARAGQTIDIWWVAKDGGLLLLVPYLLKLHVLWKRC 426
QDA++ EAQ VL +HL DE++EGFCKVSVC + ++A+T+MHHAG+G++QPN+VL AWPDDWSKN E G FV+ LRGAV+A KAVMVLKG + LPT T+DIWWVA DGGLLLLVPYLL LH W RC
Sbjct: 599 QDAVRAEEAQGVLALHLKDEKMEGFCKVSVCHDPVDAAITIMHHAGMGTMQPNSVLLAWPDDWSKNSESGVAFVATLRGAVHAHKAVMVLKGAQALPTQYEVLEPSCTVDIWWVAHDGGLLLLVPYLLSLHPTWSRC 735
BLAST of mRNA_H-elongata_contig109299.755.1 vs. uniprot
Match: A0A835Z753_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z753_9STRA) HSP 1 Score: 168 bits (426), Expect = 9.570e-46 Identity = 76/130 (58.46%), Postives = 99/130 (76.15%), Query Frame = 1
Query: 40 AQRVLGMHLTDERIEGFCKVSVCENVTESAVTVMHHAGIGSLQPNTVLFAWPDDWSK-NYEKGERFVSMLRGAVNARKAVMVLKGDKKLPTPVNPARAGQTIDIWWVAKDGGLLLLVPYLLKLHVLWKRC 426
AQ VL +HL DE+I+GFCKVSVC + ++A+T+MHHAG+G++QPN+VL AWP+DW + + G FV +RGAV+A+KAVMVLKG + +PT A T+DIWWVA DGGLLLLVP+LL LH +W C
Sbjct: 531 AQGVLSLHLKDEKIDGFCKVSVCRDPVDAAITIMHHAGMGTMQPNSVLLAWPEDWDEEDSTSGSDFVDTVRGAVHAQKAVMVLKGGQAMPTQYERLPASNTVDIWWVAHDGGLLLLVPHLLSLHPVWSSC 660
BLAST of mRNA_H-elongata_contig109299.755.1 vs. uniprot
Match: A0A6G0WHY2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHY2_9STRA) HSP 1 Score: 115 bits (288), Expect = 3.910e-27 Identity = 61/130 (46.92%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 37 EAQRVLGMHLTDERIEGFCKVSVCENVTESAVTVMHHAGIGSLQPNTVLFAWPDDWSKNYEKGERFVSMLRGAVNARKAVMVLKGDKKLPTPVNPARAGQTIDIWWVAKDGGLLLLVPYLLKLHVLWKRC 426
EA L HL RI GF V C+NV S TV +G+GSL+ NTV+ WP W E E +V ML +N +KA++VL+ LPT N + ID+WWV DGGLLLL+PYLLKLH +W++C
Sbjct: 583 EATLALREHLFSARISGFGHVYACKNVWRSMGTVAEASGMGSLRSNTVMVGWPLTWED--EDAEPYVDMLHEIINCKKALLVLQHMHLLPT--NEEKKRGNIDVWWVLHDGGLLLLMPYLLKLHRVWRKC 708
BLAST of mRNA_H-elongata_contig109299.755.1 vs. uniprot
Match: A0A7R9YE43_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE43_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.190e-25 Identity = 56/134 (41.79%), Postives = 82/134 (61.19%), Query Frame = 1
Query: 28 KGAEAQRVLGMHLTDERIEGFCKVSVCENVTESAVTVMHHAGIGSLQPNTVLFAWPDDWSKNYE-KGERFVSMLRGAVNARKAVMVLKGDKKLPTPVNPARAGQTIDIWWVAKDGGLLLLVPYLLKLHVLWKRC 426
K A +VL +L + ++GF +V + +N E T + AG+G LQPN ++F +P + E FVSMLR ++ +K +V+KG ++LP P G TIDIWWV DGG+L+L+PYLL LH +WK+C
Sbjct: 608 KARAATQVLRAYLREASVKGFARVIMTKNPAEGVFTAVQAAGVGILQPNCLMFTYPARSEMELPPQRETFVSMLRSSIACKKTTIVVKGAEQLPDNDQPFEHG-TIDIWWVVYDGGVLMLLPYLLSLHSVWKKC 740
BLAST of mRNA_H-elongata_contig109299.755.1 vs. uniprot
Match: A0A485K431_9STRA (Aste57867_621 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K431_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.040e-24 Identity = 56/137 (40.88%), Postives = 75/137 (54.74%), Query Frame = 1
Query: 28 KGAEAQRVLGMHLTDERIEGFCKVSVCENVTESAVTVMHHAGIGSLQPNTVLFAWPDDWSKNYEKGE----RFVSMLRGAVNARKAVMVLKGDKKLPTPVNPARAGQTIDIWWVAKDGGLLLLVPYLLKLHVLWKRC 426
K A L HL + RI GF V C + S V +G+GSL+ NTV+ WP W G +V ML +N +K++MVLK + PT N ++DIWWV DGGLLLL+PYLL+LH +W++C
Sbjct: 582 KAQTATLALRQHLANARISGFGHVYACRHAMRSIGMVAESSGMGSLRSNTVMVGWPQTWRTAARNGTDEAIAYVDMLHDVINCKKSIMVLKHLETFPT--NDVVKKGSMDIWWVLHDGGLLLLMPYLLRLHPVWRKC 716
BLAST of mRNA_H-elongata_contig109299.755.1 vs. uniprot
Match: A0A024TUN0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUN0_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.040e-24 Identity = 55/128 (42.97%), Postives = 77/128 (60.16%), Query Frame = 1
Query: 49 VLGMHLTDERIEGFCKVSVCENVTESAVTVMHHAGIGSLQPNTVLFAWPDDWSKNYEKGER--FVSMLRGAVNARKAVMVLKGDKKLPTPVNPARAGQTIDIWWVAKDGGLLLLVPYLLKLHVLWKRC 426
VL HL R+ F V C++ E+ V +G+G L+ NTV+ WP+ W E G+ +V ML +N +K+VMVLK + LP N A+ +D+WWV DGGLLLLVPYLL+LH +W++C
Sbjct: 580 VLRQHLATARLSAFGHVYACKDPLETMAMVAEASGMGCLRTNTVMVGWPNTW----ESGDAAPYVDMLHDMINCKKSVMVLKNMETLP--FNDAKKNGYMDVWWVLHDGGLLLLVPYLLRLHRVWRKC 701
BLAST of mRNA_H-elongata_contig109299.755.1 vs. uniprot
Match: A0A553N9X6_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553N9X6_TIGCA) HSP 1 Score: 108 bits (269), Expect = 1.430e-24 Identity = 50/134 (37.31%), Postives = 81/134 (60.45%), Query Frame = 1
Query: 28 KGAEAQRVLGMHLTDERIEGFCKVSVCENVTESAVTVMHHAGIGSLQPNTVLFAWPDDWSKNYEKGER-FVSMLRGAVNARKAVMVLKGDKKLPTPVNPARAGQTIDIWWVAKDGGLLLLVPYLLKLHVLWKRC 426
+G A+ + + DE ++GF +V V ++ TE ++ +G+G ++PNT++ WP+ W K E R FV +R A +A+ A++V KG ++ P + + IDIWW+ DGGLL+L+P+LLK H WK C
Sbjct: 791 EGQAAKVSIQQTIKDEAVKGFAEVVVSKHTTEGICHLIQTSGLGGMKPNTIILGWPNSWRKRNEDSWRVFVDTIRNAASAKMALLVPKGIQRFPDSGDKVKGN--IDIWWIVHDGGLLMLLPFLLKQHRTWKNC 922
BLAST of mRNA_H-elongata_contig109299.755.1 vs. uniprot
Match: UPI0018860FBE (solute carrier family 12 member 7 isoform X1 n=4 Tax=Syngnathidae TaxID=72045 RepID=UPI0018860FBE) HSP 1 Score: 107 bits (268), Expect = 1.970e-24 Identity = 54/139 (38.85%), Postives = 84/139 (60.43%), Query Frame = 1
Query: 28 KGAEAQRV---LGMHLTDERIEGFCKVSVCENVTESAVTVMHHAGIGSLQPNTVLFAWPDDW--SKNYEKGERFVSMLRGAVNARKAVMVLKGDKKLPTPVNPARAGQ-TIDIWWVAKDGGLLLLVPYLLKLHVLWKRC 426
K AEA++ + +T ER +GFC V V N+ + ++ AG+G ++ NTVL AWP W S + + + F+ +R +A +A++V K PT N R G+ TID+WWV DGGLL+L+P+LL+ H +W++C
Sbjct: 769 KDAEAKKAEQNIKSSMTAERTKGFCHVVVSSNLRDGVSHLIQSAGLGGMKHNTVLMAWPGTWKQSNDTQSWKNFIETIRETTSAHQALLVAKNVDSFPT--NQERLGEGTIDVWWVVHDGGLLMLLPFLLRQHKVWRKC 905 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109299.755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig109299.755.1 >prot_H-elongata_contig109299.755.1 ID=prot_H-elongata_contig109299.755.1|Name=mRNA_H-elongata_contig109299.755.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp MAVWAQDAIKGAEAQRVLGMHLTDERIEGFCKVSVCENVTESAVTVMHHAback to top mRNA from alignment at H-elongata_contig109299:776..2019+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig109299.755.1 ID=mRNA_H-elongata_contig109299.755.1|Name=mRNA_H-elongata_contig109299.755.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1244bp|location=Sequence derived from alignment at H-elongata_contig109299:776..2019+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig109299:776..2019+ >mRNA_H-elongata_contig109299.755.1 ID=mRNA_H-elongata_contig109299.755.1|Name=mRNA_H-elongata_contig109299.755.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=852bp|location=Sequence derived from alignment at H-elongata_contig109299:776..2019+ (Himanthalia elongata Himel1 dioecious)back to top |