mRNA_H-elongata_contig109292.753.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A6H5JIP0_9PHAE (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIP0_9PHAE) HSP 1 Score: 348 bits (893), Expect = 3.150e-117 Identity = 172/245 (70.20%), Postives = 201/245 (82.04%), Query Frame = 1
Query: 1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHKGCDISG-----------HDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVPRR 702
A+LG++VACLDFVKPS MG+KWGLGGTCVNVGCIPKKLMHQA+L+AGH DA +GW + + + + G HDW+ MV+ +Q+YIKGLNFKYR+DLRSKGVEY+NALGRL+DV+TVVAT + +ERVL CG +VVAVGGRP L CEGG+LA+TSDD+FSL+T PGKTLVVGASYVALECA GFLTGLGVDTTVMVRS+LLR FDQ IAERIG FM AEGTRF+RPAVP+R
Sbjct: 30 ARLGKKVACLDFVKPSVMGSKWGLGGTCVNVGCIPKKLMHQAALLAGHASDAPFFGWPAGPEGEDGSRSEEDGGVAGGEGKRSVTHDWEVMVQGVQNYIKGLNFKYRTDLRSKGVEYINALGRLQDVHTVVATDKNNKERVLSCGSVVVAVGGRPNQLPCEGGELAMTSDDIFSLRTPPGKTLVVGASYVALECA-GFLTGLGVDTTVMVRSILLRGFDQGIAERIGSFMEAEGTRFLRPAVPQR 273
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: D8LJA3_ECTSI (Thioredoxin reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJA3_ECTSI) HSP 1 Score: 347 bits (889), Expect = 9.180e-112 Identity = 172/245 (70.20%), Postives = 203/245 (82.86%), Query Frame = 1
Query: 1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKN---SPTHKGCDISG--------HDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVPRR 702
A+LG++VACLDFVKPS MG+KWGLGGTCVNVGCIPKKLMHQA+L+AGH KDA +GW + + S + ++G HDW+ MV+ +Q+YIKGLNFKYR+DLRSKGVEY+NALGRL+D +TVVAT + +ERVL CG +VVAVGGRP L CEGG+LA+TSDD+F+L+T PGKTLVVGASYVALECA GFLTGLGVDTTVMVRS+LLR FDQ IAERIG FM AEGTRF+RPAVP+R
Sbjct: 325 ARLGKKVACLDFVKPSVMGSKWGLGGTCVNVGCIPKKLMHQAALLAGHAKDAPFFGWPAGPEGEDGSRLEEAGGVAGGEGKRSVTHDWEVMVQGVQNYIKGLNFKYRTDLRSKGVEYINALGRLQDAHTVVATDKNNKERVLSCGSVVVAVGGRPNQLPCEGGELAMTSDDIFALRTPPGKTLVVGASYVALECA-GFLTGLGVDTTVMVRSILLRGFDQGIAERIGSFMEAEGTRFLRPAVPQR 568
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A2R5GAY9_9STRA (Thioredoxin reductase SEP1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAY9_9STRA) HSP 1 Score: 269 bits (687), Expect = 2.120e-83 Identity = 131/234 (55.98%), Postives = 170/234 (72.65%), Query Frame = 1
Query: 1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVPRR 702
++LG +VA LDFV PSP GTKWGLGGTCVNVGCIPKKL H A+L ++DA +GW + + H+W+ +V +++YIK LNF Y+ LR KGV+YLN LG L D +TV + G+E + +I++AVGGRP+PL CEGG+LA++SDD+F L + PGKTLVVGASYVALECA+ FLTG G DT+VMVRS+LLR FDQ +A+++G M GT+FIR AVPR+
Sbjct: 153 SELGAKVALLDFVVPSPHGTKWGLGGTCVNVGCIPKKLFHHAALTGEFMQDAPDFGWDVQ-----------VGAHNWEKLVDNVRNYIKSLNFGYKVQLREKGVKYLNKLGSLIDAHTVKTVDKKGKEETISAQRIIIAVGGRPRPLDCEGGELAISSDDMFYLDSAPGKTLVVGASYVALECAS-FLTGFGYDTSVMVRSILLRGFDQQMADKVGEAMEKLGTKFIRGAVPRK 374
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A7S2G908_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G908_9STRA) HSP 1 Score: 250 bits (639), Expect = 2.100e-80 Identity = 130/235 (55.32%), Postives = 159/235 (67.66%), Query Frame = 1
Query: 1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHK-GCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGGDLAVTSDDLFSLQTHP--GKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVP 696
A+LG + A LDFVKPS +G+ WGLGGTCVNVGCIPKK+MH A+L+ G ++ AK YGW ++ K G + HDW +V A+Q +I+ LNFKYR DLR GV+Y+NALGR +D T+ G + + +VAVGGRPKPL GGD A+TSDDLFS P G+ LVVG SYVALECA G LTGLG D TVM RS+LLR FDQ +A+ I M + GTRFI VP
Sbjct: 4 ARLGAKTAVLDFVKPSSLGSTWGLGGTCVNVGCIPKKIMHHAALVGGVLQGAKQYGW----NDAAVQKLGVQVRDHDWPMLVDAVQGHIRMLNFKYRVDLRKHGVKYVNALGRFRDATTLEVVDGKGARSCMTADQFIVAVGGRPKPLDIPGGDFALTSDDLFSHSALPKHGRILVVGGSYVALECA-GLLTGLGFDVTVMYRSILLRGFDQQVADLIREDMQSRGTRFIGEVVP 233
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A7S2WBE6_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WBE6_9STRA) HSP 1 Score: 259 bits (663), Expect = 5.680e-80 Identity = 130/232 (56.03%), Postives = 160/232 (68.97%), Query Frame = 1
Query: 1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVP 696
A LG +VA LDFVKPSP GT WGLGGTCVNVGCIPKKL H ++L + DAK +GW + HDW + +++YIK LNF Y+ LR+K V+YLN LG L D +TV + G+E + +I++AVGGRPK L C G +LA+TSDD+F L+ PGKTLVVGASYVALECA+ FLTGLG DTTVMVRS+ LR FDQ +A+ +G M GT+FIR AVP
Sbjct: 139 AGLGAKVALLDFVKPSPQGTSWGLGGTCVNVGCIPKKLFHHSALFGEGLHDAKDFGW-----------DISVEKHDWSRFITNVRNYIKSLNFGYKVQLRTKQVKYLNKLGSLVDAHTVSCVDKKGKEEKITAKRILIAVGGRPKQLQCPGSELAITSDDMFFLEKPPGKTLVVGASYVALECAS-FLTGLGYDTTVMVRSIFLRGFDQQMADMVGDAMQKTGTKFIRSAVP 358
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A7S1VBB9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VBB9_9STRA) HSP 1 Score: 252 bits (643), Expect = 4.170e-79 Identity = 122/237 (51.48%), Postives = 165/237 (69.62%), Query Frame = 1
Query: 1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVK-DAKVYGWI--SEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVPRR 702
A LG +VAC+DFVKPSP GT WGLGGTCVNVGCIPKKLMH +L+ + DA+ +G S + T+ D W+ + +Q+YI+ LNFKYR R K V Y+N L + KD +T+ AT + G+ + + ++AVGGRP PL CEGG+LA++SDD+F+L+++PGKTL VGASY++LECA GFL G G+D TV VRS+LLR FD++ A++IG FM G +F R VP++
Sbjct: 157 ADLGAKVACMDFVKPSPQGTSWGLGGTCVNVGCIPKKLMHAGALLRESIHADAEAFGLQIPSGSSDGGTNGNSDFK---WEQLRENVQNYIRSLNFKYRVAFREKNVTYMNKLAKFKDAHTIEATDKKGRTSEVTAARFIIAVGGRPSPLTCEGGELAISSDDIFALESNPGKTLCVGASYISLECA-GFLAGFGIDVTVAVRSILLRGFDRECADKIGAFMEDHGVKFKRGVVPKK 389
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: V4AUG6_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AUG6_LOTGI) HSP 1 Score: 254 bits (649), Expect = 5.090e-79 Identity = 132/233 (56.65%), Postives = 167/233 (71.67%), Query Frame = 1
Query: 1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPK-PLICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVP 696
++LGQ+VA LDFVKPS GTKWGLGGTCVNVGCIPKKL+HQA+L+ ++DAK YGW N P+ DI+ H W+SM +Q+Y++ LN+ +R L+ K VEY+NA+G L D +TV G+ER+L IV+AVGGRP+ P I ++TSDDLF + PGKTLVVGASY+ALEC GFLTGLG DTTVMVRS+LLR FDQ +A IG +M GT+F+R +P
Sbjct: 21 SQLGQKVAVLDFVKPSTQGTKWGLGGTCVNVGCIPKKLIHQAALLGHSIQDAKYYGW-----NIPS----DIT-HSWESMCDNVQNYVRSLNWGHRVQLKDKNVEYINAVGTLVDKHTVKTVDGKGKERLLSTDNIVIAVGGRPRLPDIPGALQYSITSDDLFWMTKPPGKTLVVGASYIALECG-GFLTGLGFDTTVMVRSILLRGFDQQMANHIGDYMSNNGTKFLRECIP 242
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A7S0QLL0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QLL0_9CRYP) HSP 1 Score: 248 bits (633), Expect = 1.250e-78 Identity = 135/234 (57.69%), Postives = 160/234 (68.38%), Query Frame = 1
Query: 1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGW-ISEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPL-ICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVP 696
A G +VA DFV P+P+GT WGLGGTCVNVGCIPKKLMHQA L+ V+DAK +GW I E K+ HDW +MV +Q +I LNF+YRS+LRSKGVEY+NAL R D +TV T + G VVA GGRPK L I + +TSDDLFSL+ PGKTLVVGASYVALECA GFL GLG DTTVM+RS+ LR FDQ+ AERI ++M G +FIR +P
Sbjct: 33 ASHGVKVAVADFVTPTPIGTTWGLGGTCVNVGCIPKKLMHQACLLGEAVEDAKSFGWKIPEGKS-----------HDWSTMVSNVQDHICSLNFRYRSELRSKGVEYINALARFVDDHTVELTDKKGNVTRKTAEHFVVATGGRPKYLGIPNERECCITSDDLFSLKKPPGKTLVVGASYVALECA-GFLAGLGYDTTVMMRSIPLRGFDQEFAERICKYMSEHGVKFIRGCIP 254
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A6U0BL67_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A6U0BL67_9CHLO) HSP 1 Score: 253 bits (647), Expect = 1.390e-78 Identity = 128/233 (54.94%), Postives = 159/233 (68.24%), Query Frame = 1
Query: 1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGG-DLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVP 696
AKLG + CLDFVKPSP GT WGLGGTCVNVGCIPKKLMHQA ++ DA+ YGW E +GHDW+ MV +Q++I LNF YR+ LR V YLNA G LKD +TVVAT + G E+V+ KIV+AVGGRP G + +TSDD+FSL PGKTL VGASY++LE AGFLT LG +T+V +RS+ LR FDQ++AE+I +M GT+F+R + P
Sbjct: 30 AKLGAKTVCLDFVKPSPAGTTWGLGGTCVNVGCIPKKLMHQAGILGEQFSDAREYGWKLES-----------TGHDWEKMVEQVQNHIGSLNFGYRTALREANVTYLNAYGSLKDAHTVVATKKNGTEQVITADKIVIAVGGRPSYPDAPGAKEYCITSDDVFSLPKAPGKTLCVGASYISLE-TAGFLTALGFETSVAIRSIPLRGFDQEVAEKIVSYMSTHGTKFLRDSQP 250
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: UPI000F7C5C52 (thioredoxin reductase 2, mitochondrial isoform X2 n=1 Tax=Anas platyrhynchos TaxID=8839 RepID=UPI000F7C5C52) HSP 1 Score: 248 bits (634), Expect = 3.850e-78 Identity = 123/234 (52.56%), Postives = 164/234 (70.09%), Query Frame = 1
Query: 1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPK-PLICEGG-DLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVP 696
A+ G++VA LD+V+PSP GTKWGLGGTCVNVGCIPKKLMHQA+L+ +KDA+ YGW H P H H+W M +A+Q+Y+K LN+ +R L+ K V+Y N G D +T+ +GG+E +L KIV+A GGRPK P G + +TSDDLF L+ PGKTLVVGASY++LECA GFLTG+G+DTTVM+RS+ LR FDQ +A + +M + GT+F++ +P
Sbjct: 49 AQFGRKVAVLDYVEPSPQGTKWGLGGTCVNVGCIPKKLMHQAALLGSALKDAQRYGWNIAH---PVH-------HNWSEMAQAVQNYVKSLNWGHRVQLQDKKVKYFNVKGSFSDPHTIRGLTKGGKETILTAEKIVIATGGRPKYPTHVAGALEYGITSDDLFWLKESPGKTLVVGASYISLECA-GFLTGIGLDTTVMMRSIPLRGFDQQMASLVTEYMESYGTKFLKKCIP 271 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig109292.753.1 >prot_H-elongata_contig109292.753.1 ID=prot_H-elongata_contig109292.753.1|Name=mRNA_H-elongata_contig109292.753.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKback to top mRNA from alignment at H-elongata_contig109292:126..2200- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig109292.753.1 ID=mRNA_H-elongata_contig109292.753.1|Name=mRNA_H-elongata_contig109292.753.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2075bp|location=Sequence derived from alignment at H-elongata_contig109292:126..2200- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig109292:126..2200- >mRNA_H-elongata_contig109292.753.1 ID=mRNA_H-elongata_contig109292.753.1|Name=mRNA_H-elongata_contig109292.753.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at H-elongata_contig109292:126..2200- (Himanthalia elongata Himel1 dioecious)back to top |