mRNA_H-elongata_contig108947.727.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig108947.727.1 vs. uniprot
Match: D7FW04_ECTSI (Magnesium chelatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW04_ECTSI) HSP 1 Score: 305 bits (781), Expect = 3.260e-93 Identity = 150/174 (86.21%), Postives = 160/174 (91.95%), Query Frame = 1
Query: 1 VTEGVRAAVLACVEKSTNSEGRIMEVNPFADFFSNVIGGGS-PMKAALEKNGFRGCKDDDLEPVFKYLEFCLKQVVADNELGGLVSALNGEYITPGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVDCASVVVDRLLERLSAEQGGKYPETVAFTLWGTDNIKTYGETTAEL 519
VTE RAAVLACVE+STNSEGRI+EVNPFADFFS + GGS PMKAALE+ GF+GCKD DLEPVF YLEFCLKQVVADNELGGL+ ALNGEYI PGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVDCA VVVDRLLERLSAEQ G+YPETVAFTLWGTDNIKTYGE+ A++
Sbjct: 924 VTEACRAAVLACVERSTNSEGRIVEVNPFADFFSKAVSGGSSPMKAALEQFGFKGCKDADLEPVFTYLEFCLKQVVADNELGGLLGALNGEYIPPGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVDCAMVVVDRLLERLSAEQDGEYPETVAFTLWGTDNIKTYGESLAQV 1097
BLAST of mRNA_H-elongata_contig108947.727.1 vs. uniprot
Match: A0A835YVC9_9STRA (Magnesium chelatase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC9_9STRA) HSP 1 Score: 251 bits (642), Expect = 3.110e-74 Identity = 122/173 (70.52%), Postives = 141/173 (81.50%), Query Frame = 1
Query: 1 VTEGVRAAVLACVEKSTNSEGRIMEVNPFADFFSNVIGGGSPMKAALEKNGFRGCKDDDLEPVFKYLEFCLKQVVADNELGGLVSALNGEYITPGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVDCASVVVDRLLERLSAEQGGKYPETVAFTLWGTDNIKTYGETTAEL 519
+TE RAAV ACVE+STN+EGR+ +VNP F GG SPM+ AL GF D DLEP+F Y+EFCLKQVVADNELGGL+SALNGEY+ PGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVD A +V +RL+ERL + G+YPE+VAFTLWGTDNIKTYGE+ A++
Sbjct: 915 ITEASRAAVRACVERSTNAEGRVEQVNPLGKLFDGFTGG-SPMRKALVAAGFPAVSDADLEPLFNYVEFCLKQVVADNELGGLLSALNGEYMVPGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVDVAEMVCNRLIERLRIDNEGRYPESVAFTLWGTDNIKTYGESLAQV 1086
BLAST of mRNA_H-elongata_contig108947.727.1 vs. uniprot
Match: A0A7S3MNV4_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3MNV4_9SPIT) HSP 1 Score: 232 bits (591), Expect = 3.250e-70 Identity = 113/167 (67.66%), Postives = 132/167 (79.04%), Query Frame = 1
Query: 1 VTEGVRAAVLACVEKSTNSEGRIMEVNPFADFFSNVIGGGSPMKAALEKNGFRGCKDDDLEPVFKYLEFCLKQVVADNELGGLVSALNGEYITPGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVDCASVVVDRLLERLSAEQGGKYPETVAFTLWGTDNIKTYG 501
V E VRA+V A VE+ST++ GR+ EVNP N+ GG SPM AL+K+GF D D+E +F YLEFCLKQ+VADNE+G L+ LN E+ITPGPGGDPIRNP VLPTGKNMHALDPQ+IPTKAA DCA VVVDRL+ER A+ G+YPE+VAF LWGTDNIKTYG
Sbjct: 358 VVEAVRASVRASVERSTDASGRVTEVNPMFAGLQNMFGG-SPMVQALKKSGFTKITDPDIEKIFGYLEFCLKQIVADNEMGALLEGLNAEFITPGPGGDPIRNPLVLPTGKNMHALDPQAIPTKAACDCAKVVVDRLIERQVADNNGEYPESVAFVLWGTDNIKTYG 523
BLAST of mRNA_H-elongata_contig108947.727.1 vs. uniprot
Match: A0A7S2C6I2_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C6I2_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.480e-67 Identity = 119/175 (68.00%), Postives = 134/175 (76.57%), Query Frame = 1
Query: 1 VTEGVRAAVLACVEKSTNSEGRIMEVNPFADFFSNVIGGGSPMKAALEKNGFRGCKDDDLEPVFKYLEFCLKQVVADNELGGLVSALNGEYITPGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVDCASVVVDRLLERLSA--EQGGKYPETVAFTLWGTDNIKTYGETTAEL 519
+ R AV A V+ STNSEGRI EVNP ++ GGS AL+ GF ++ L P F+YLEFCLKQVVADNELG LVSAL+G YI PGPGGDPIRNPDVLPTGKNMHALDPQSIPT AAVDCA VVVDRLLERL+A E G YPE++AFTLWGTDNIKTYGE+ A++
Sbjct: 500 INTACRNAVRALVDSSTNSEGRIEEVNPLFKSVGSIFSGGSAWSKALKAEGFE-VPEEALSPNFEYLEFCLKQVVADNELGALVSALDGRYIVPGPGGDPIRNPDVLPTGKNMHALDPQSIPTAAAVDCALVVVDRLLERLAADSEDGETYPESIAFTLWGTDNIKTYGESLAQV 673
BLAST of mRNA_H-elongata_contig108947.727.1 vs. uniprot
Match: A0A7S2FYG3_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2FYG3_9DINO) HSP 1 Score: 224 bits (571), Expect = 1.870e-67 Identity = 111/173 (64.16%), Postives = 135/173 (78.03%), Query Frame = 1
Query: 1 VTEGVRAAVLACVEKSTNSEGRIMEVNPFADFFSNVIGGGSPMKAALEKNGFRGCKDDDLEPVFKYLEFCLKQVVADNELGGLVSALNGEYITPGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVDCASVVVDRLLERLSAEQGGKYPETVAFTLWGTDNIKTYGETTAEL 519
+TE RAAV + V +STNSEGR+ EVN F F +++ GG+P K AL + GF C + L P+F+YL+ CL +VV +NEL LV ALNGE++ PGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAA D A VVVDRLLER+ Q G+ PE++AFTLWGTDNIKTYGE+ A++
Sbjct: 74 ITEASRAAVRSLVAESTNSEGRVEEVNSFMRGFMSLVQGGTPWKRALNEAGFSECDEGALTPLFEYLQVCLGEVVKNNELPSLVRALNGEFVEPGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAADTALVVVDRLLERMG--QSGELPESIAFTLWGTDNIKTYGESLAQV 244
BLAST of mRNA_H-elongata_contig108947.727.1 vs. uniprot
Match: A0A7S0DEM2_9EUKA (Magnesium chelatase n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DEM2_9EUKA) HSP 1 Score: 232 bits (591), Expect = 2.400e-67 Identity = 115/173 (66.47%), Postives = 136/173 (78.61%), Query Frame = 1
Query: 1 VTEGVRAAVLACVEKSTNSEGRIMEVNPFADFFSNVIGGGSPMKAALEKNGFRGCKDDDLEPVFKYLEFCLKQVVADNELGGLVSALNGEYITPGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVDCASVVVDRLLERLSAEQGGKYPETVAFTLWGTDNIKTYGETTAEL 519
+ E RAAV A +S N++GRI VNPFA + G SP + AL +NGF +++L P+FKYL FCL+QVVADNELGGL+SAL GEYI PGPGGDPIRNP VLPTGKNMHALDPQ+IPTKAAVDCA VVVDRLLER + GG+YPE++A TLWGTDNIKTYGE+ A++
Sbjct: 957 IVEATRAAVRAAALESANADGRIEAVNPFAVQAQALFGVKSPWRKALSENGFE-VGENELTPLFKYLGFCLEQVVADNELGGLMSALEGEYILPGPGGDPIRNPKVLPTGKNMHALDPQAIPTKAAVDCAKVVVDRLLERQKQDMGGQYPESIALTLWGTDNIKTYGESLAQV 1128
BLAST of mRNA_H-elongata_contig108947.727.1 vs. uniprot
Match: A0A6U4P8T8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4P8T8_HEMAN) HSP 1 Score: 229 bits (585), Expect = 1.060e-66 Identity = 113/173 (65.32%), Postives = 134/173 (77.46%), Query Frame = 1
Query: 1 VTEGVRAAVLACVEKSTNSEGRIMEVNPFADFFSNVIGGGSPMKAALEKNGFRGCKDDDLEPVFKYLEFCLKQVVADNELGGLVSALNGEYITPGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVDCASVVVDRLLERLSAEQGGKYPETVAFTLWGTDNIKTYGETTAEL 519
+TE VR +V A V +STNS+GR+ VNP A + G +P AL+K G+ +D+L P+F YLEFCL+QVV DNELG LV AL+G+YI PGPGGDPIRNPDVLPTGKNMHALDPQSIPT AAVDCA VVDRLLERL A+ YP++VAFTLWGTDNIKTYGE+ A++
Sbjct: 639 ITEAVRESVRALVGRSTNSQGRVEAVNPVASMMEAMTG--APWTNALKKAGYDKVNNDELAPLFAYLEFCLQQVVKDNELGALVDALDGKYIMPGPGGDPIRNPDVLPTGKNMHALDPQSIPTSAAVDCAKTVVDRLLERLYADNDNNYPQSVAFTLWGTDNIKTYGESLAQV 809
BLAST of mRNA_H-elongata_contig108947.727.1 vs. uniprot
Match: A0A6U3YD35_9STRA (Magnesium chelatase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YD35_9STRA) HSP 1 Score: 229 bits (585), Expect = 1.260e-66 Identity = 119/177 (67.23%), Postives = 139/177 (78.53%), Query Frame = 1
Query: 1 VTEGVRAAVLACVEKSTNSEGRIMEVNP----FADFFSNVIGGGSPMKAALEKNGFRGCKDDDLEPVFKYLEFCLKQVVADNELGGLVSALNGEYITPGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVDCASVVVDRLLERLSAEQGGKYPETVAFTLWGTDNIKTYGETTAEL 519
+T RAAV A VE STNS+GRI+EVN FS + GGSP K AL+ GF ++ L P+F Y+EFCLKQVVADNELG +V AL+G+YI PGPGGDPIRNPDVLPTGKNMHALDPQSIPT AAVDCA+VVVDRLL+RL + G+YPE+VAFTLWGTDNIKTYGE+ A++
Sbjct: 702 ITNANRAAVRASVESSTNSDGRIVEVNTAFKGVGQMFS-ALSGGSPWKKALQAEGF-DVSEEALTPLFDYIEFCLKQVVADNELGAMVDALDGKYIIPGPGGDPIRNPDVLPTGKNMHALDPQSIPTTAAVDCATVVVDRLLDRLK-QDNGEYPESVAFTLWGTDNIKTYGESLAQV 875
BLAST of mRNA_H-elongata_contig108947.727.1 vs. uniprot
Match: A0A7S0MBG0_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MBG0_9CRYP) HSP 1 Score: 219 bits (559), Expect = 1.350e-66 Identity = 104/153 (67.97%), Postives = 122/153 (79.74%), Query Frame = 1
Query: 61 GRIMEVNPFADFFSNVIGGGSPMKAALEKNGFRGCKDDDLEPVFKYLEFCLKQVVADNELGGLVSALNGEYITPGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVDCASVVVDRLLERLSAEQGGKYPETVAFTLWGTDNIKTYGETTAEL 519
GR+ VNP + G +P + L + GF K++DL P+F YLEFCLKQ+VADNELGGL+ AL G+YI PGPGGDPIRNP+VLPTGKNMHALDPQSIPT AAVDCA VVVDRLLERL + GGKYPE++AFTLWGTDNIKTYGE+ A++
Sbjct: 1 GRVESVNPMQGLMERMTG--TPWRNMLVQKGFAEVKEEDLTPLFAYLEFCLKQIVADNELGGLMGALEGKYILPGPGGDPIRNPEVLPTGKNMHALDPQSIPTSAAVDCAKVVVDRLLERLFQDSGGKYPESIAFTLWGTDNIKTYGESLAQV 151
BLAST of mRNA_H-elongata_contig108947.727.1 vs. uniprot
Match: A0A812MVZ1_9DINO (Magnesium chelatase n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812MVZ1_9DINO) HSP 1 Score: 229 bits (584), Expect = 2.110e-66 Identity = 115/173 (66.47%), Postives = 138/173 (79.77%), Query Frame = 1
Query: 1 VTEGVRAAVLACVEKSTNSEGRIMEVNPFADFFSNVIGGGSPMKAALEKNGFRGCKDDDLEPVFKYLEFCLKQVVADNELGGLVSALNGEYITPGPGGDPIRNPDVLPTGKNMHALDPQSIPTKAAVDCASVVVDRLLERLSAEQGGKYPETVAFTLWGTDNIKTYGETTAEL 519
+T RAAV A V++STNSEGR+ EVNPF N GGSP K ALE+ GF G DD L+P+F+YL+ CL +VV +NE+G L+SAL+G++I PGPGGDPIRNPDVLPTGKNMHALDP SIPTKAA D A VVVDRLLE L+ EQ G+ PE++AFTLWGTDNIKTYGE+ A++
Sbjct: 955 ITLASRAAVGALVKQSTNSEGRVEEVNPFLQDVFNFFSGGSPYKQALEECGFDGVSDDYLKPLFEYLQACLGEVVRNNEVGSLISALDGKFIEPGPGGDPIRNPDVLPTGKNMHALDPNSIPTKAATDVAMVVVDRLLESLT-EQQGEMPESIAFTLWGTDNIKTYGESLAQV 1126 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108947.727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig108947.727.1 >prot_H-elongata_contig108947.727.1 ID=prot_H-elongata_contig108947.727.1|Name=mRNA_H-elongata_contig108947.727.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp VTEGVRAAVLACVEKSTNSEGRIMEVNPFADFFSNVIGGGSPMKAALEKNback to top mRNA from alignment at H-elongata_contig108947:487..1908+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig108947.727.1 ID=mRNA_H-elongata_contig108947.727.1|Name=mRNA_H-elongata_contig108947.727.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1422bp|location=Sequence derived from alignment at H-elongata_contig108947:487..1908+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig108947:487..1908+ >mRNA_H-elongata_contig108947.727.1 ID=mRNA_H-elongata_contig108947.727.1|Name=mRNA_H-elongata_contig108947.727.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1050bp|location=Sequence derived from alignment at H-elongata_contig108947:487..1908+ (Himanthalia elongata Himel1 dioecious)back to top |