mRNA_H-elongata_contig108502.692.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig108502.692.1 vs. uniprot
Match: A0A6H5KUQ1_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUQ1_9PHAE) HSP 1 Score: 157 bits (396), Expect = 1.150e-42 Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 1
Query: 1 LTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYQGIGDDFKRLDFIPEEASAFDLI 243
LTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDY+GIGDDFKRLDFIPEE +I
Sbjct: 465 LTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYEGIGDDFKRLDFIPEEVDVTPII 545
BLAST of mRNA_H-elongata_contig108502.692.1 vs. uniprot
Match: A0A836CGN4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN4_9STRA) HSP 1 Score: 139 bits (351), Expect = 8.410e-37 Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 1
Query: 1 LTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYQGIGDDFKRLDFIPEEASAFDLI 243
LTQLLDTG FHADPHPGNLIRTP+G+LAILDFGLMT+ITD+QK+GMIEAISHLVHRDY IGDDFKRLDFIP ++
Sbjct: 256 LTQLLDTGLFHADPHPGNLIRTPDGRLAILDFGLMTEITDDQKYGMIEAISHLVHRDYGSIGDDFKRLDFIPAHVDVTPIV 336
BLAST of mRNA_H-elongata_contig108502.692.1 vs. uniprot
Match: A0A7S2FT02_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FT02_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.420e-36 Identity = 57/81 (70.37%), Postives = 68/81 (83.95%), Query Frame = 1
Query: 1 LTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYQGIGDDFKRLDFIPEEASAFDLI 243
LTQLLDTGFFHADPHPGN++RTP+GKL ILDFGLMT+ITD+QK+GMIEA+ HL++RDY IGDDF LDFIP ++
Sbjct: 45 LTQLLDTGFFHADPHPGNMLRTPDGKLVILDFGLMTEITDDQKYGMIEAVVHLINRDYSEIGDDFVNLDFIPRGTDTSPIV 125
BLAST of mRNA_H-elongata_contig108502.692.1 vs. uniprot
Match: A0A7S2DRM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRM5_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.070e-35 Identity = 60/81 (74.07%), Postives = 71/81 (87.65%), Query Frame = 1
Query: 1 LTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYQGIGDDFKRLDFIPEEASAFDLI 243
LTQLLDTGFFHADPHPGN++RTP+GKL ILDFGLMT+IT+NQK+GMIEAI+HL++RDY IGDDFK LDFIPE ++
Sbjct: 284 LTQLLDTGFFHADPHPGNMLRTPDGKLVILDFGLMTEITENQKYGMIEAIAHLINRDYSEIGDDFKNLDFIPEGVDTTPIV 364
BLAST of mRNA_H-elongata_contig108502.692.1 vs. uniprot
Match: A0A813FK08_POLGL (Hypothetical protein n=4 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FK08_POLGL) HSP 1 Score: 135 bits (341), Expect = 3.100e-35 Identity = 60/77 (77.92%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 1 LTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYQGIGDDFKRLDFIPEEASA 231
LTQLL TGFFHADPHPGN++RTP+G+LAILDFGLMT+ITD+QKFGM+EAI+HLVHRDY IG DFK LDFIPE+
Sbjct: 430 LTQLLQTGFFHADPHPGNMLRTPDGRLAILDFGLMTRITDDQKFGMVEAIAHLVHRDYAAIGQDFKNLDFIPEDVDV 506
BLAST of mRNA_H-elongata_contig108502.692.1 vs. uniprot
Match: A0A7R9YCG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCG7_9STRA) HSP 1 Score: 125 bits (313), Expect = 6.080e-35 Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 1
Query: 1 LTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYQGIGDDFKRLDFIPEEASAFDLI 243
LTQLL GFFHADPHPGN+IRTP+G+L ILDFGLMT++TD+QK+GMIEAI HL++RDY IG DFK LDFIP + +I
Sbjct: 46 LTQLLGEGFFHADPHPGNMIRTPDGQLCILDFGLMTEVTDDQKYGMIEAIVHLINRDYTDIGQDFKNLDFIPADVDVEPII 126
BLAST of mRNA_H-elongata_contig108502.692.1 vs. uniprot
Match: A0A2K1J1G5_PHYPA (Protein kinase domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J1G5_PHYPA) HSP 1 Score: 134 bits (337), Expect = 6.230e-35 Identity = 63/73 (86.30%), Postives = 67/73 (91.78%), Query Frame = 1
Query: 1 LTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYQGIGDDFKRLDFIPE 219
L QLLDTG FHADPHPGNLIRTPEGKLAILDFGLMTQITDNQK+GMIEAISHL+HRDY+ I +DF LDFIPE
Sbjct: 231 LKQLLDTGLFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKYGMIEAISHLIHRDYEAIVEDFVLLDFIPE 303
BLAST of mRNA_H-elongata_contig108502.692.1 vs. uniprot
Match: A0A176VHJ8_MARPO (Protein kinase domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VHJ8_MARPO) HSP 1 Score: 134 bits (338), Expect = 7.410e-35 Identity = 62/73 (84.93%), Postives = 68/73 (93.15%), Query Frame = 1
Query: 1 LTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYQGIGDDFKRLDFIPE 219
L QLLDTGFFHADPHPGNLIRTP+GKLAILDFGLMTQITD QK+GMIEAISHL+HRDY+ I +DF +LDFIPE
Sbjct: 395 LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLMTQITDQQKYGMIEAISHLIHRDYEAIVEDFVKLDFIPE 467
BLAST of mRNA_H-elongata_contig108502.692.1 vs. uniprot
Match: A0A2K1IQR5_PHYPA (Protein kinase domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IQR5_PHYPA) HSP 1 Score: 134 bits (337), Expect = 1.040e-34 Identity = 63/73 (86.30%), Postives = 67/73 (91.78%), Query Frame = 1
Query: 1 LTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYQGIGDDFKRLDFIPE 219
L QLLDTG FHADPHPGNLIRTPEGKLAILDFGLMTQITDNQK+GMIEAISHL+HRDY+ I +DF LDFIPE
Sbjct: 423 LKQLLDTGLFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKYGMIEAISHLIHRDYEAIVEDFVLLDFIPE 495
BLAST of mRNA_H-elongata_contig108502.692.1 vs. uniprot
Match: A0A7I4F8Y9_PHYPA (Protein kinase domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4F8Y9_PHYPA) HSP 1 Score: 134 bits (337), Expect = 1.040e-34 Identity = 63/73 (86.30%), Postives = 67/73 (91.78%), Query Frame = 1
Query: 1 LTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYQGIGDDFKRLDFIPE 219
L QLLDTG FHADPHPGNLIRTPEGKLAILDFGLMTQITDNQK+GMIEAISHL+HRDY+ I +DF LDFIPE
Sbjct: 425 LKQLLDTGLFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKYGMIEAISHLIHRDYEAIVEDFVLLDFIPE 497 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108502.692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig108502.692.1 >prot_H-elongata_contig108502.692.1 ID=prot_H-elongata_contig108502.692.1|Name=mRNA_H-elongata_contig108502.692.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp LTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAIback to top mRNA from alignment at H-elongata_contig108502:276..1396+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig108502.692.1 ID=mRNA_H-elongata_contig108502.692.1|Name=mRNA_H-elongata_contig108502.692.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1121bp|location=Sequence derived from alignment at H-elongata_contig108502:276..1396+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig108502:276..1396+ >mRNA_H-elongata_contig108502.692.1 ID=mRNA_H-elongata_contig108502.692.1|Name=mRNA_H-elongata_contig108502.692.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=516bp|location=Sequence derived from alignment at H-elongata_contig108502:276..1396+ (Himanthalia elongata Himel1 dioecious)back to top |