mRNA_H-elongata_contig108389.684.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: D7G2U5_ECTSI (Autophagy-related protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2U5_ECTSI) HSP 1 Score: 176 bits (447), Expect = 8.980e-56 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
Query: 1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 258
VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG
Sbjct: 30 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 115
BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: K3W768_GLOUD (Autophagy-related protein n=5 Tax=Oomycota TaxID=4762 RepID=K3W768_GLOUD) HSP 1 Score: 154 bits (389), Expect = 5.050e-47 Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1
Query: 1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 258
VICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct: 21 VICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 106
BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: ATG8_PHYIN (Autophagy-related protein 8 n=19 Tax=Peronosporaceae TaxID=4777 RepID=ATG8_PHYIN) HSP 1 Score: 154 bits (389), Expect = 6.470e-47 Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1
Query: 1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 258
VICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct: 30 VICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115
BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: A0A485LSI6_9STRA (Autophagy-related protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSI6_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.480e-46 Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1
Query: 1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 258
VICEKADRS+IPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct: 29 VICEKADRSEIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDSDGFLYITYSGENTFG 114
BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: A0A0P1A6U3_PLAHL (Autophagy-related protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6U3_PLAHL) HSP 1 Score: 154 bits (389), Expect = 1.920e-46 Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1
Query: 1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 258
VICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct: 57 VICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 142
BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: A0A024FXQ2_9STRA (Autophagy-related protein n=4 Tax=Albugo candida TaxID=65357 RepID=A0A024FXQ2_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.210e-46 Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1
Query: 1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 258
VICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct: 78 VICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDADGFLYITYSGENTFG 163
BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: A0A397C7Z1_9STRA (Autophagy-related protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C7Z1_9STRA) HSP 1 Score: 153 bits (387), Expect = 3.020e-46 Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1
Query: 1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 258
VICEKADRS+IPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct: 49 VICEKADRSEIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDSDGFLYITYSGENTFG 134
BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: M4BR17_HYAAE (Autophagy-related protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BR17_HYAAE) HSP 1 Score: 154 bits (389), Expect = 3.770e-46 Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1
Query: 1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 258
VICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct: 87 VICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 172
BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: A0A024TY39_9STRA (Autophagy-related protein n=17 Tax=Oomycota TaxID=4762 RepID=A0A024TY39_9STRA) HSP 1 Score: 152 bits (384), Expect = 4.790e-46 Identity = 70/86 (81.40%), Postives = 79/86 (91.86%), Query Frame = 1
Query: 1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 258
VICEKADRS+IPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T++LMS +YE QKD DGFLYITYSGENTFG
Sbjct: 30 VICEKADRSEIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTASLMSNIYEEQKDSDGFLYITYSGENTFG 115
BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: A0A7S3ZPI7_9STRA (Autophagy-related protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPI7_9STRA) HSP 1 Score: 152 bits (383), Expect = 4.990e-46 Identity = 72/86 (83.72%), Postives = 80/86 (93.02%), Query Frame = 1
Query: 1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 258
VICE+ADRSD+PDIDKKKYLVPADL+ GQFIYVIRKRIKL PEKAIFIFV++ IP T++LMS VYE QKDEDGFLY+TYSGENTFG
Sbjct: 29 VICERADRSDVPDIDKKKYLVPADLTVGQFIYVIRKRIKLPPEKAIFIFVDNVIPPTASLMSAVYEVQKDEDGFLYVTYSGENTFG 114 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig108389.684.1 >prot_H-elongata_contig108389.684.1 ID=prot_H-elongata_contig108389.684.1|Name=mRNA_H-elongata_contig108389.684.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVback to top mRNA from alignment at H-elongata_contig108389:51..2139+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig108389.684.1 ID=mRNA_H-elongata_contig108389.684.1|Name=mRNA_H-elongata_contig108389.684.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2089bp|location=Sequence derived from alignment at H-elongata_contig108389:51..2139+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig108389:51..2139+ >mRNA_H-elongata_contig108389.684.1 ID=mRNA_H-elongata_contig108389.684.1|Name=mRNA_H-elongata_contig108389.684.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=522bp|location=Sequence derived from alignment at H-elongata_contig108389:51..2139+ (Himanthalia elongata Himel1 dioecious)back to top |