mRNA_H-elongata_contig10833.680.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A6H5KZ63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ63_9PHAE) HSP 1 Score: 369 bits (948), Expect = 8.450e-120 Identity = 176/204 (86.27%), Postives = 185/204 (90.69%), Query Frame = 1
Query: 1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPATEKVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETGAPKGSFRRQDGAQIKKTSANAGVGRGKPAKFK 612
VEGIPWTCDE DVREFFKGCGKIT VRMPRWQDSGRPRGYAHVAFAG SGA+AAFG DGQYL GRYLT+Q PQEPATEK RRANR AEQP GC+TVFVKNLPYD +ED V EALAGCGRI SVRLAMWNHTRKLKGFGYVEF +ERGAE CVR Q+ LS+GGRPLVVDFETGAPKGSFRRQDGAQIKKTSA+AGVG+GK KFK
Sbjct: 133 VEGIPWTCDESDVREFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGAQAAFGRDGQYLNGRYLTVQAPQEPATEKARRANRKAEQPAGCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSIGGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFK 336
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: D7FP47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP47_ECTSI) HSP 1 Score: 365 bits (936), Expect = 7.990e-118 Identity = 178/216 (82.41%), Postives = 186/216 (86.11%), Query Frame = 1
Query: 1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQE------------PQEPATEKVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETGAPKGSFRRQDGAQIKKTSANAGVGRGKPAKFK 612
VEGIPWTCDE DVREFFKGCGKIT VRMPRWQDSGRPRGYAHVAFAG SGARAAFG DGQYL GRYLT+Q+ PQEPATEK RRANR AEQP GC+TVFVKNLPYD DED V EALAGCGRI SVRLAMWNHTRKLKGFGYVEF +ERGAE CVR Q+ LS+GGRPLVVDFETGAPKGSFRRQDGAQIKKTSA+AGVG+GK KFK
Sbjct: 133 VEGIPWTCDESDVREFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQITVESNNHALQAPQEPATEKARRANRKAEQPTGCRTVFVKNLPYDVDEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQNLSIGGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFK 348
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A836CEI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI7_9STRA) HSP 1 Score: 220 bits (561), Expect = 6.160e-61 Identity = 102/190 (53.68%), Postives = 136/190 (71.58%), Query Frame = 1
Query: 1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPATEKVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETGAPKGSFRRQDGAQIKKTS 570
VEGIP++ E DV +FF CG++ +VRMPR+QDSGRPRGYAHV FA + A AF DG+YL+GRYL +Q+ Q P + + +A +P+GC+TVFVKNLPYDADE V +A + CG + VRLA+WN+T++ KGFGYV+F E GA+A V Q + V GRP++VD+E G KGSFR DG + +K +
Sbjct: 234 VEGIPYSASEADVSKFFSDCGEVISVRMPRYQDSGRPRGYAHVVFASDAAAAKAFKKDGEYLQGRYLKVQQAQAPRALQAQSQAAAAPRPKGCRTVFVKNLPYDADEQMVTKAFSKCGEVAIVRLAIWNNTKQRKGFGYVDFADETGAQAAVERQANIKVAGRPVLVDYEVGRVKGSFRLADGQKYEKVA 423
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: W7TYE4_9STRA (31 kDa chloroplastic n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYE4_9STRA) HSP 1 Score: 198 bits (504), Expect = 8.570e-55 Identity = 100/191 (52.36%), Postives = 124/191 (64.92%), Query Frame = 1
Query: 1 VEGIPWTCDEEDVREFF--KGCGKITAVRMPRWQDSGRPRGYAHVAFAGLS-GARAAFGLDGQYLKGRYLTIQEPQEPATEKVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETGAPKGSFRRQDGAQIKK 564
VEGI + E+D+ FF KGCGK+ VR+PRWQDSGRPRGYAH+ F G A L G + GRYLT+Q Q P + V + ++P GC TVFVKNLPY+ ED VREA CG+I +VRLA+W HT++ KGF YV+F E AE V+ Q + VGGR + VD+ETGAPK S+R DG Q K
Sbjct: 98 VEGISYEATEDDLVRFFQDKGCGKVKEVRLPRWQDSGRPRGYAHIEFKKTDEGVAKALSLSGARMMGRYLTVQRAQAPKSLGVGGSLPLKDKPPGCDTVFVKNLPYNTTEDAVREAFTFCGKIKTVRLAVWQHTQQQKGFCYVQFEKENAAEIAVKKQGAIQVGGRKVFVDYETGAPKASYRAPDGRQWSK 288
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A6G0WFD1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WFD1_9STRA) HSP 1 Score: 191 bits (485), Expect = 5.250e-52 Identity = 91/184 (49.46%), Postives = 123/184 (66.85%), Query Frame = 1
Query: 1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEP-ATEKVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETGAPKGSFRRQDG 549
VEG+ + DE + F CG + VR+PR+QDSGRPRGYAHV F + A+ A LDG+YL RYLTI+ + P ++ R + ++ + +GC+TVF+K LPYD DE V+EAL+ CG I SVRL +WNHT+KLKGFGYVEF E A + + + +G R +++D +TGAPK SFR DG
Sbjct: 82 VEGMSYDADESALVSHFSSCGTVREVRLPRYQDSGRPRGYAHVVFDSEASAKKALALDGKYLLKRYLTIRPAETPRGMDQARSSRKNVKITKGCRTVFIKQLPYDVDEATVKEALSSCGDIVSVRLPLWNHTKKLKGFGYVEFADEASAVEATK-KSGMKIGSRMVLIDLDTGAPKASFRNTDG 264
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A2D4BXX0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXX0_PYTIN) HSP 1 Score: 192 bits (488), Expect = 1.600e-51 Identity = 98/187 (52.41%), Postives = 126/187 (67.38%), Query Frame = 1
Query: 1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPATEKVRRANRSAEQP--RGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETG--APKGSFRRQDG 549
VEGIP+ DE D+ F CG + VRMPR+QDSG+PRGYAHV F S A LDG+YL GRYLT+++ + P T V + + + +GC+TVF+K+LPYD +E VREALA CG I SVRL +WNHT+KLKGFGYVEF SE A A V+ + + +G R +++ ET APK SFR +DG
Sbjct: 153 VEGIPYKADEGDLVSHFSSCGIVKEVRMPRYQDSGKPRGYAHVVFESASSIPKALKLDGKYLFGRYLTVKQAERPRTLDVALQEQKSVKKAVKGCRTVFIKHLPYDVEEAAVREALASCGTILSVRLPLWNHTKKLKGFGYVEFSSEDEAIAAVK-RSGMKIGDRMVIISLETAGSAPKASFRLRDG 338
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A485L4I6_9STRA (Aste57867_15645 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4I6_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.070e-51 Identity = 89/185 (48.11%), Postives = 123/185 (66.49%), Query Frame = 1
Query: 1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPA--TEKVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETGAPKGSFRRQDG 549
VEGI + DE + F CG + VR+PRW DSG+PRGY HV F + A+ A LDG+Y+ RYLTI++ + P V+ +SA+ +GC+TV++K LPY+ +ED V++ALA CG I SVRL MW HT+KLKGFGYVEF E GA + + + +G R +++D +TGAPK SFR+ +G
Sbjct: 80 VEGISYDADESALVTHFSSCGHVKEVRLPRWHDSGKPRGYGHVVFETEAAAKKALALDGKYMLKRYLTIRQAEAPRGIERAVQNRKQSAKPTKGCRTVYIKQLPYEVEEDTVKQALASCGEILSVRLPMWGHTKKLKGFGYVEFADEAGAVKATK-RSGMKIGDRMVLIDLDTGAPKASFRQTNG 263
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A225WYL6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYL6_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.000e-50 Identity = 96/189 (50.79%), Postives = 127/189 (67.20%), Query Frame = 1
Query: 1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEP-ATE---KVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETG--APKGSFRRQDG 549
VEGIP+ +E D+ F CG + VRMPR+QDSG+PRGYAHV F + + A LDGQYL RYL+I+ + P A E K + N + + +GC+TVF+K LPY+ +ED +REALA CG ITSVRL +WNHT+KLKGFGYVEF SE A A R + + +G R +++ + APK SFR++DG
Sbjct: 67 VEGIPYRANEGDLVTHFSSCGTVREVRMPRYQDSGKPRGYAHVVFDDEAALKKALKLDGQYLFNRYLSIRRAEAPRAVEMALKEKNQNTNKKAVKGCRTVFIKQLPYEVEEDAIREALASCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAAAR-RSGMKIGDRMVLISLDAAGSAPKASFRQRDG 254
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: K3WSU1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU1_GLOUD) HSP 1 Score: 187 bits (475), Expect = 7.270e-50 Identity = 98/192 (51.04%), Postives = 123/192 (64.06%), Query Frame = 1
Query: 1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPATEKV--RRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFET-GAPKGSFRRQDGAQIKKT 567
VEGIP+ DE DV F CG + VRMPR+QDSGRPRGYAHV F A LDG+YL RYL++ Q P T ++ + + GC+TVFVK LPYD +E +R+ALA CG I SVRL +WNHT+KLKGFGYVEF E A A V+ + + VGGR ++++ + GAPK SFR+ DG KT
Sbjct: 143 VEGIPYQADEGDVVSHFSVCGIVKEVRMPRYQDSGRPRGYAHVVFESEKAIPKALALDGKYLFKRYLSVSRAQTPRTLELALKETKNVKKAVVGCKTVFVKQLPYDIEEQALRDALASCGTIMSVRLPIWNHTKKLKGFGYVEFSKEEEAVAAVK-RSGMKVGGRMVIINLDVAGAPKASFRQTDGQYWNKT 333
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A662XMP9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XMP9_9STRA) HSP 1 Score: 187 bits (474), Expect = 7.390e-50 Identity = 94/189 (49.74%), Postives = 124/189 (65.61%), Query Frame = 1
Query: 1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPATE----KVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFET--GAPKGSFRRQDG 549
VEGIP+ DE D+ F CG + VRMPR+QDSG+PRGYAHV F + A LDG+YL RYL+++ + P + K + N + + +GC+TVF+K LPYD +ED VR ALA CG +TSVRL WNHT+KLKGFGYVEF SE A A R + + +G R +++ + GAPK SFR++DG
Sbjct: 128 VEGIPYRADEGDLVTHFSSCGAVREVRMPRYQDSGKPRGYAHVVFEDEAALEKALKLDGKYLFSRYLSVRRAEAPRSAELALKEQSQNATKKAVKGCRTVFIKQLPYDVEEDAVRAALASCGTVTSVRLPFWNHTKKLKGFGYVEFSSEDEALAASR-RSGMKIGDRMVLISLDVAGGAPKASFRQRDG 315 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10833.680.1 >prot_H-elongata_contig10833.680.1 ID=prot_H-elongata_contig10833.680.1|Name=mRNA_H-elongata_contig10833.680.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=182bp MPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPATback to top mRNA from alignment at H-elongata_contig10833:5044..7940- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10833.680.1 ID=mRNA_H-elongata_contig10833.680.1|Name=mRNA_H-elongata_contig10833.680.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2897bp|location=Sequence derived from alignment at H-elongata_contig10833:5044..7940- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10833:5044..7940- >mRNA_H-elongata_contig10833.680.1 ID=mRNA_H-elongata_contig10833.680.1|Name=mRNA_H-elongata_contig10833.680.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1092bp|location=Sequence derived from alignment at H-elongata_contig10833:5044..7940- (Himanthalia elongata Himel1 dioecious)back to top |