mRNA_H-elongata_contig10822.668.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10822.668.1
Unique NamemRNA_H-elongata_contig10822.668.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig10822.668.1 vs. uniprot
Match: D7FTL1_ECTSI (Pribosyltran_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL1_ECTSI)

HSP 1 Score: 615 bits (1586), Expect = 3.320e-212
Identity = 325/372 (87.37%), Postives = 341/372 (91.67%), Query Frame = 2
Query:  176 VGCERSERGHTGDMEGRGAGWVTREDSRSAMWP-------------NKDRPKSGGMKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVIVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTNLHNPVVVSPDAGGVYRAKKFREGLAHRYGLDAGLAMIIKQRAKANEVDRMDLVGSVEDSDVIIIDDMIDTAGTLCKAASVIKQNGARRVFAFASHGLFNGPANVRLAESELSEVVVLDTIPLTAELANNPKIVQLSVAHLLAQAVFNIHNKKSISALFK 1252
            VGCE + RG  G+     A  + REDSRS M P             N+DRPKSGGMKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNV+VKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDT+LHNPVVVSPDAGGVYRAKKFREGLAHRYGLDAGLAMIIKQRAKANEVDRMDLVGSV+DSDVII+DDMIDTAGTLCKAASV+K+ GARRVFAFASHGLFNGPAN RLA+SELSEVVVLDTIPL+ + ANNPKI+QLSVAHLLAQAV+NIH+KKSISALFK
Sbjct:   96 VGCEAA-RGAAGE-----APPMRREDSRSTMMPGVXXXXXXXXXXXNRDRPKSGGMKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVMVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTDLHNPVVVSPDAGGVYRAKKFREGLAHRYGLDAGLAMIIKQRAKANEVDRMDLVGSVKDSDVIIVDDMIDTAGTLCKAASVLKEYGARRVFAFASHGLFNGPANQRLADSELSEVVVLDTIPLSPDCANNPKIIQLSVAHLLAQAVYNIHHKKSISALFK 461          
BLAST of mRNA_H-elongata_contig10822.668.1 vs. uniprot
Match: A0A836CK09_9STRA (Phosphoribosyltransferase-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK09_9STRA)

HSP 1 Score: 578 bits (1491), Expect = 8.000e-200
Identity = 291/336 (86.61%), Postives = 316/336 (94.05%), Query Frame = 2
Query:  245 REDSRSAMWPNKDRPKSGGMKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVIVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTNLHNPVVVSPDAGGVYRAKKFREGLAHRYGLDAGLAMIIKQRAKANEVDRMDLVGSVEDSDVIIIDDMIDTAGTLCKAASVIKQNGARRVFAFASHGLFNGPANVRLAESELSEVVVLDTIPLTAELANNPKIVQLSVAHLLAQAVFNIHNKKSISALFK 1252
            REDSRSAMWP+KDRPKSGGMKIFSGNANP LAK+IA+YLGINLG++ V RFADGEVNV+V ENVRGKDVY+IQPTCMPVNENLVELLLMVSTMRR+SARRIT VIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGG+IGVGYFGD +LHNPVVVSPDAGGVYRAKKFREGLA ++ LDAGLAMI+KQRA+ANEVDRMDLVGSV DSDVII+DDMIDTAGTLCKAA ++K  GARRVFAFASHGLFN PAN R+ ES L+EVVVL+TIPL+   ANN +I+QLSVAHL+AQAV+NIHNKKSISALFK
Sbjct:    1 REDSRSAMWPSKDRPKSGGMKIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDLDAGLAMIVKQRARANEVDRMDLVGSVADSDVIIVDDMIDTAGTLCKAAEILKAQGARRVFAFASHGLFNEPANKRITESALTEVVVLNTIPLSDACANNERIIQLSVAHLIAQAVYNIHNKKSISALFK 336          
BLAST of mRNA_H-elongata_contig10822.668.1 vs. uniprot
Match: A0A4D9D5B0_9STRA (Pribosyltran_N domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5B0_9STRA)

HSP 1 Score: 513 bits (1321), Expect = 1.280e-173
Identity = 260/321 (81.00%), Postives = 290/321 (90.34%), Query Frame = 2
Query:  290 KSGGMKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVIVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTNLHNPVVVSPDAGGVYRAKKFREGLAHRYGLDAGLAMIIKQRAKANEVDRMDLVGSVEDSDVIIIDDMIDTAGTLCKAASVIKQNGARRVFAFASHGLFNGPANVRLAESELSEVVVLDTIPLTAELANNPKIVQLSVAHLLAQAVFNIHNKKSISALFK 1252
            K+ GMK+FSGNAN  LA +IA  LG+NLG++ V RFADGEVNV+V ENVRGKDVYI+QPTC PVNENL+ELLLMVSTMRRSSARRITAVIPYYGYARQDRKM ARVPISAADVARL+EAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGG +GV YFGD +LHNPV+VSPDAGGVYRAKKFREGLA +Y +DAGLAMIIKQRA+ANEVDRMDLVGSV DSDV+I+DDMIDTAGTL KAA V+  NGARRV++FASHGLF+GPAN R+++S+L EVVVL+TIPLT     N KIVQLSVA L+AQA++NIH KKSISALFK
Sbjct:   50 KTSGMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDVDAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVANGARRVYSFASHGLFSGPANERISQSKLEEVVVLNTIPLTPAHEANAKIVQLSVAPLIAQAIYNIHQKKSISALFK 370          
BLAST of mRNA_H-elongata_contig10822.668.1 vs. uniprot
Match: A0A7S2UW69_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW69_9STRA)

HSP 1 Score: 513 bits (1321), Expect = 6.820e-173
Identity = 261/345 (75.65%), Postives = 299/345 (86.67%), Query Frame = 2
Query:  239 VTREDSRSAMWPNK-----DRPKSGG--MKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVIVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTNLHNPVVVSPDAGGVYRAKKFREGLAHRYGLDAGLAMIIKQRAKANEVDRMDLVGSVEDSDVIIIDDMIDTAGTLCKAASVIKQNGARRVFAFASHGLFNGPANVRLAESELSEVVVLDTIPLTAELANNPKIVQLSVAHLLAQAVFNIHNKKSISALFK 1252
            + R +SRS+MWP++        K GG  +KIFSG AN  LA +IA +LG+NLG+++V RF+DGEVNV V ENVRGKDVYI+QPTC P NENL+ELLLMVSTMRRSSA+RITAVIPYYGYARQDRKM ARVPISAADVARL+EAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGG+IGV YFGD  L NPVVVSPDAGGVYRAKKFREGLAH+Y +DAGLAMIIKQRAKAN V++MDLVG+V+DSDVII+DDMIDTAGTLCKAA  + + GARRVFAFASHGLF+GPA+ R+  S L+EVVVL+++PL  E  NN KI QLS AHL+AQA++NIH KKSISALFK
Sbjct:   73 IVRHESRSSMWPSQATSTGSGSKEGGSMIKIFSGQANRKLAIEIANHLGVNLGKIQVARFSDGEVNVQVNENVRGKDVYIVQPTCPPTNENLMELLLMVSTMRRSSAQRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIIGVAYFGDKELQNPVVVSPDAGGVYRAKKFREGLAHKYEMDAGLAMIIKQRAKANAVEKMDLVGNVDDSDVIIVDDMIDTAGTLCKAADTLVEKGARRVFAFASHGLFSGPASDRITRSSLAEVVVLNSVPLNEESENNEKITQLSAAHLVAQAIYNIHQKKSISALFK 417          
BLAST of mRNA_H-elongata_contig10822.668.1 vs. uniprot
Match: A0A1E7FFF6_9STRA (Putative ribose-phosphate diphosphokinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFF6_9STRA)

HSP 1 Score: 479 bits (1233), Expect = 7.500e-161
Identity = 237/339 (69.91%), Postives = 285/339 (84.07%), Query Frame = 2
Query:  239 VTREDSRSAMWPNKDRPKSGGMKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVIVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTNLHNPVVVSPDAGGVYRAKKFREGLAHRYGL-DAGLAMIIKQRAKANEVDRMDLVGSVEDSDVIIIDDMIDTAGTLCKAASVIKQNGARRVFAFASHGLFNGPANVRLAESELSEVVVLDTIPLTAELANNPKIVQLSVAHLLAQAVFNIHNKKSISALFK 1252
            +T E+        K +  SGG+K+FSGN N AL+ +I  YLGINLG+  V RFADGE N+++ ENVRGKD YIIQPTC PVN+N++ELLLM+ST+RR+SARRIT VIPYYGYARQDRKM ARVPISAADVARL+E+MGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGG++G+ YFG  +LHNPVVVSPDAGGVYRAKKF+EGL H+Y + D GLAMI+KQRA+A +VDRMDLVG V++ D I++DDMIDTAGTLCKAA V+ +NGARRVFAFASHGL +GP N RLA S++ E+V+L+TIP + +   N K+  LSVA LLAQA+FN+H KKS+SALFK
Sbjct:    1 MTPEEFEFEKATKKAKQHSGGLKLFSGNGNLALSLEICRYLGINLGKATVGRFADGEANIVIHENVRGKDCYIIQPTCPPVNDNIMELLLMISTLRRASARRITVVIPYYGYARQDRKMQARVPISAADVARLIESMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGLDYFGSKDLHNPVVVSPDAGGVYRAKKFKEGLMHKYDMQDIGLAMIVKQRARAGKVDRMDLVGDVKNCDCILVDDMIDTAGTLCKAADVLIENGARRVFAFASHGLLSGPGNDRLANSKMEEIVILNTIPTSPQREANEKLTMLSVAPLLAQAIFNVHAKKSLSALFK 339          
BLAST of mRNA_H-elongata_contig10822.668.1 vs. uniprot
Match: A0A7S4AMH1_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AMH1_9STRA)

HSP 1 Score: 478 bits (1229), Expect = 4.590e-158
Identity = 239/326 (73.31%), Postives = 279/326 (85.58%), Query Frame = 2
Query:  278 KDRPKSGGMKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVIVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTNLHNPVVVSPDAGGVYRAKKFREGLAHRYGL-DAGLAMIIKQRAKANEVDRMDLVGSVEDSDVIIIDDMIDTAGTLCKAASVIKQNGARRVFAFASHGLFNGPANVRLAESELSEVVVLDTIPLTAELANNPKIVQLSVAHLLAQAVFNIHNKKSISALFK 1252
            K +  SGG+K+FSGN N AL+ +I  YLGINLG+  V RFADGE NV+V ENVRGKD Y+IQPTC PVN+N++ELLLMVST+RR+SARRIT VIPYYGYARQDRKM ARVPISAADVARL+EAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGG++G+ YFG  +LHNPVVVSPDAGGVYRAKKF+EGL H+Y + D GLAMI+KQRA+A  VD MDLVG V++ D I++DDMIDTAGTLCKAA V+ +NGARRVFAFASHGL +GP N RLA S++ E+V+L+TIP + +   N K+  LSVA LLAQA+FNIH KKSISALFK
Sbjct:  158 KAKQHSGGLKLFSGNGNLALSLEICRYLGINLGKATVGRFADGEANVVVHENVRGKDCYVIQPTCPPVNDNIMELLLMVSTLRRASARRITVVIPYYGYARQDRKMQARVPISAADVARLIEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGLDYFGSKDLHNPVVVSPDAGGVYRAKKFKEGLMHKYDMQDIGLAMIVKQRARAGLVDTMDLVGDVKNCDCILVDDMIDTAGTLCKAADVLIENGARRVFAFASHGLLSGPGNDRLANSKMEEIVILNTIPTSPQREANEKLTMLSVAPLLAQAIFNIHAKKSISALFK 483          
BLAST of mRNA_H-elongata_contig10822.668.1 vs. uniprot
Match: A0A6U3SUJ2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SUJ2_9STRA)

HSP 1 Score: 478 bits (1229), Expect = 6.660e-158
Identity = 240/339 (70.80%), Postives = 284/339 (83.78%), Query Frame = 2
Query:  239 VTREDSRSAMWPNKDRPKSGGMKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVIVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTNLHNPVVVSPDAGGVYRAKKFREGLAHRYGLD-AGLAMIIKQRAKANEVDRMDLVGSVEDSDVIIIDDMIDTAGTLCKAASVIKQNGARRVFAFASHGLFNGPANVRLAESELSEVVVLDTIPLTAELANNPKIVQLSVAHLLAQAVFNIHNKKSISALFK 1252
            +T +++R     +K +  +GG+K+FSGN N ALA +I+  LG+NLGR  V RFADGE NV++ ENVRGKD YIIQPTC PVN+N++ELLLMVST+ R+SARR+T VIPYYGYARQDRKM ARVPISAADVARL+EAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGG++G+ +FG  +LHNPVVVSPDAGGVYRAKKF+EGL H+Y +D  GLAMIIKQRA+A  VD+MDLVG V D D II+DDMIDTAGTLCKAA V+   GARRVFAFASHGL +GP N R+A S + E V+L+TIP TA+   N K+V+LSVA LLAQ++FNIH KKSISALFK
Sbjct:  156 MTAQEARLEAAAHKAKRHAGGLKVFSGNGNMALALEISKVLGVNLGRATVGRFADGECNVMIHENVRGKDCYIIQPTCPPVNDNIMELLLMVSTLNRASARRVTVVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGIDHFGGKDLHNPVVVSPDAGGVYRAKKFKEGLMHKYEMDDIGLAMIIKQRARAGTVDQMDLVGDVNDCDCIIVDDMIDTAGTLCKAADVLVSKGARRVFAFASHGLLSGPGNDRIANSSMEECVILNTIPSTAQRQANEKLVELSVAPLLAQSIFNIHAKKSISALFK 494          
BLAST of mRNA_H-elongata_contig10822.668.1 vs. uniprot
Match: A0A7S2S1M6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S1M6_9STRA)

HSP 1 Score: 476 bits (1224), Expect = 1.310e-157
Identity = 240/339 (70.80%), Postives = 282/339 (83.19%), Query Frame = 2
Query:  239 VTREDSRSAMWPNKDRPKSGGMKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVIVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTNLHNPVVVSPDAGGVYRAKKFREGLAHRYGL-DAGLAMIIKQRAKANEVDRMDLVGSVEDSDVIIIDDMIDTAGTLCKAASVIKQNGARRVFAFASHGLFNGPANVRLAESELSEVVVLDTIPLTAELANNPKIVQLSVAHLLAQAVFNIHNKKSISALFK 1252
            +T +++R      K +  +GG+KIFSGN N  LA +IA  LGINLG+  V +FADGE NV++ ENVRGKD Y+IQPTC PVN+N++ELLLMVST+ R+SARRIT VIPYYGYARQDRKM ARVPISAADVARL+EAMG+DRV+AVDLHCGQIQGFFGPRVPVDNLDGG +G+ +FGD +LHNPV+VSPDAGGVYRAKKF+EGL H+Y   D GLAMIIKQRA+A  VD+MDLVG V+D D II+DDMIDTAGTLCKAA V+K  GARRVFAFASHGL +GP N R+A SEL E V+L+TIP + +   N K+V+LSVA LLAQ +FNIH KKSISALFK
Sbjct:  125 LTEKEARLEAAALKAKKHAGGLKIFSGNGNMTLALEIAQILGINLGKATVGQFADGETNVMIHENVRGKDCYVIQPTCPPVNDNIMELLLMVSTLNRASARRITVVIPYYGYARQDRKMQARVPISAADVARLLEAMGIDRVIAVDLHCGQIQGFFGPRVPVDNLDGGFVGIDHFGDKDLHNPVIVSPDAGGVYRAKKFKEGLMHKYEKHDIGLAMIIKQRARAGTVDQMDLVGDVKDCDCIIVDDMIDTAGTLCKAADVLKSKGARRVFAFASHGLLSGPGNHRIANSELEECVILNTIPSSPQRTANDKLVELSVAPLLAQTIFNIHAKKSISALFK 463          
BLAST of mRNA_H-elongata_contig10822.668.1 vs. uniprot
Match: K0TN54_THAOC (Pribosyltran_N domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TN54_THAOC)

HSP 1 Score: 473 bits (1217), Expect = 1.490e-157
Identity = 238/339 (70.21%), Postives = 281/339 (82.89%), Query Frame = 2
Query:  239 VTREDSRSAMWPNKDRPKSGGMKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVIVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTNLHNPVVVSPDAGGVYRAKKFREGLAHRYGL-DAGLAMIIKQRAKANEVDRMDLVGSVEDSDVIIIDDMIDTAGTLCKAASVIKQNGARRVFAFASHGLFNGPANVRLAESELSEVVVLDTIPLTAELANNPKIVQLSVAHLLAQAVFNIHNKKSISALFK 1252
            +T +++R      K +   GG+K+FSGN N  L+ +IA  LG+NLGR  V  FADGE+NV+V ENVRGKDVYIIQPTC PVN NL+ELLLMVS + R+SARR+T VIPYYGYARQDRKM ARVPISAADVARL+EAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGG++G+ +FG  +LHNPV+VSPDAGGVYRAKKF+EGLA++YG  D G+AMIIKQRA+A  VD+MDLVG V+D D II+DDMIDTAGTLCKAA V+   GARRVFAFASHGL +GP N R+A S + E V+L+TIP T + A N K+V+LSVA LLAQ +FNIH K+SISALFK
Sbjct:   59 MTPDEARLEAATLKAKKHGGGLKLFSGNGNMTLSLEIAKLLGVNLGRATVSSFADGEINVMVHENVRGKDVYIIQPTCPPVNNNLMELLLMVSCLNRASARRVTVVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGIDHFGGKDLHNPVIVSPDAGGVYRAKKFKEGLAYKYGWEDVGIAMIIKQRARAGSVDQMDLVGDVKDCDCIIVDDMIDTAGTLCKAADVLVDQGARRVFAFASHGLLSGPGNDRIANSSMEECVILNTIPSTPQRAANDKLVELSVAPLLAQTIFNIHAKRSISALFK 397          
BLAST of mRNA_H-elongata_contig10822.668.1 vs. uniprot
Match: A0A1Z5JZU2_FISSO (Ribose-phosphate pyrophosphokinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZU2_FISSO)

HSP 1 Score: 475 bits (1222), Expect = 3.550e-157
Identity = 237/326 (72.70%), Postives = 280/326 (85.89%), Query Frame = 2
Query:  278 KDRPKSGGMKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVIVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTNLHNPVVVSPDAGGVYRAKKFREGLAHRYGL-DAGLAMIIKQRAKANEVDRMDLVGSVEDSDVIIIDDMIDTAGTLCKAASVIKQNGARRVFAFASHGLFNGPANVRLAESELSEVVVLDTIPLTAELANNPKIVQLSVAHLLAQAVFNIHNKKSISALFK 1252
            K +  SGG+K+FSGN N +L+ +IA +LGINLG+  V RFADGEVN ++ ENVRGKDVYI+QPTC PVN+N++ELLLM+ST+RR+SARRIT VIPYYGYARQDRKM ARVPISAADVARLMEAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGG++G+ YFG  +LHNPVVVSPDAGGVYRAKKF+EGL  +Y + D GLAMI+KQRA+A  VD+MDLVG V+D D I++DDMIDTAGTLCKAA V+  +GARRVFAFASHGL +GP N R+A S + EVV+L+TIP + +   N K+ +LSVA LLAQA+FNIH KKSISALFK
Sbjct:  147 KLKQHSGGLKVFSGNGNMSLSLEIARHLGINLGKATVGRFADGEVNCVINENVRGKDVYIVQPTCPPVNDNIMELLLMISTLRRASARRITVVIPYYGYARQDRKMQARVPISAADVARLMEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGLDYFGCKDLHNPVVVSPDAGGVYRAKKFKEGLEQKYEMNDVGLAMIVKQRARAGAVDQMDLVGDVKDCDCILVDDMIDTAGTLCKAADVLIASGARRVFAFASHGLLSGPGNDRIANSNIEEVVILNTIPTSPQREANEKLTELSVAPLLAQAIFNIHAKKSISALFK 472          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10822.668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTL1_ECTSI3.320e-21287.37Pribosyltran_N domain-containing protein n=2 Tax=E... [more]
A0A836CK09_9STRA8.000e-20086.61Phosphoribosyltransferase-like protein (Fragment) ... [more]
A0A4D9D5B0_9STRA1.280e-17381.00Pribosyltran_N domain-containing protein n=2 Tax=M... [more]
A0A7S2UW69_9STRA6.820e-17375.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1E7FFF6_9STRA7.500e-16169.91Putative ribose-phosphate diphosphokinase n=1 Tax=... [more]
A0A7S4AMH1_9STRA4.590e-15873.31Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A6U3SUJ2_9STRA6.660e-15870.80Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2S1M6_9STRA1.310e-15770.80Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
K0TN54_THAOC1.490e-15770.21Pribosyltran_N domain-containing protein n=1 Tax=T... [more]
A0A1Z5JZU2_FISSO3.550e-15772.70Ribose-phosphate pyrophosphokinase n=2 Tax=Fistuli... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10822contigH-elongata_contig10822:1471..8435 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score609.0
Seed ortholog evalue1.4e-171
Seed eggNOG ortholog2880.D7FTL1
KEGG rclassRC00002,RC00078
KEGG koko:K00948,ko:K14638
KEGG TC2.A.17.3
KEGG ReactionR01049
KEGG Pathwayko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00005
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.ribose phosphate diphosphokinase activity
EggNOG OGsCOG0462@1,KOG1448@2759
EC2.7.6.1
COG Functional cat.EF
BiGG ReactioniRC1080.CRv4_Au5_s8_g15040_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPhosphoribosyltransferase-like
Ec32 orthologEc-06_008650.1
Exons9
Model size2405
Cds size1041
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929610.2292714-UTR-H-elongata_contig10822:1470..16841622929610.2292714-UTR-H-elongata_contig10822:1470..1684Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10822 1471..1684 +
1691679090.5269327-UTR-H-elongata_contig10822:1470..16841691679090.5269327-UTR-H-elongata_contig10822:1470..1684Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10822 1471..1684 +
1622929610.6875536-UTR-H-elongata_contig10822:7285..84351622929610.6875536-UTR-H-elongata_contig10822:7285..8435Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10822 7286..8435 +
1691679090.6403615-UTR-H-elongata_contig10822:7285..84351691679090.6403615-UTR-H-elongata_contig10822:7285..8435Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10822 7286..8435 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929610.242231-CDS-H-elongata_contig10822:1684..17601622929610.242231-CDS-H-elongata_contig10822:1684..1760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 1685..1760 +
1691679090.5413487-CDS-H-elongata_contig10822:1684..17601691679090.5413487-CDS-H-elongata_contig10822:1684..1760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 1685..1760 +
1622929610.2527387-CDS-H-elongata_contig10822:2551..26461622929610.2527387-CDS-H-elongata_contig10822:2551..2646Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 2552..2646 +
1691679090.560497-CDS-H-elongata_contig10822:2551..26461691679090.560497-CDS-H-elongata_contig10822:2551..2646Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 2552..2646 +
1622929610.5613563-CDS-H-elongata_contig10822:3280..34061622929610.5613563-CDS-H-elongata_contig10822:3280..3406Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 3281..3406 +
1691679090.5708976-CDS-H-elongata_contig10822:3280..34061691679090.5708976-CDS-H-elongata_contig10822:3280..3406Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 3281..3406 +
1622929610.5869203-CDS-H-elongata_contig10822:4142..42811622929610.5869203-CDS-H-elongata_contig10822:4142..4281Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 4143..4281 +
1691679090.580672-CDS-H-elongata_contig10822:4142..42811691679090.580672-CDS-H-elongata_contig10822:4142..4281Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 4143..4281 +
1622929610.6004226-CDS-H-elongata_contig10822:4779..49171622929610.6004226-CDS-H-elongata_contig10822:4779..4917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 4780..4917 +
1691679090.5904377-CDS-H-elongata_contig10822:4779..49171691679090.5904377-CDS-H-elongata_contig10822:4779..4917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 4780..4917 +
1622929610.621394-CDS-H-elongata_contig10822:5464..55891622929610.621394-CDS-H-elongata_contig10822:5464..5589Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 5465..5589 +
1691679090.600569-CDS-H-elongata_contig10822:5464..55891691679090.600569-CDS-H-elongata_contig10822:5464..5589Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 5465..5589 +
1622929610.6354141-CDS-H-elongata_contig10822:6070..61881622929610.6354141-CDS-H-elongata_contig10822:6070..6188Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 6071..6188 +
1691679090.6083193-CDS-H-elongata_contig10822:6070..61881691679090.6083193-CDS-H-elongata_contig10822:6070..6188Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 6071..6188 +
1622929610.6508987-CDS-H-elongata_contig10822:6514..65971622929610.6508987-CDS-H-elongata_contig10822:6514..6597Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 6515..6597 +
1691679090.6153734-CDS-H-elongata_contig10822:6514..65971691679090.6153734-CDS-H-elongata_contig10822:6514..6597Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 6515..6597 +
1622929610.6714144-CDS-H-elongata_contig10822:7144..72851622929610.6714144-CDS-H-elongata_contig10822:7144..7285Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 7145..7285 +
1691679090.6230054-CDS-H-elongata_contig10822:7144..72851691679090.6230054-CDS-H-elongata_contig10822:7144..7285Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10822 7145..7285 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10822.668.1prot_H-elongata_contig10822.668.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10822 1685..7285 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10822.668.1

>prot_H-elongata_contig10822.668.1 ID=prot_H-elongata_contig10822.668.1|Name=mRNA_H-elongata_contig10822.668.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=347bp
MEGRGAGWVTREDSRSAMWPNKDRPKSGGMKIFSGNANPALAKDIAAYLG
INLGRVKVDRFADGEVNVIVKENVRGKDVYIIQPTCMPVNENLVELLLMV
STMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRV
VAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTNLHNPVVVSPDAGG
VYRAKKFREGLAHRYGLDAGLAMIIKQRAKANEVDRMDLVGSVEDSDVII
IDDMIDTAGTLCKAASVIKQNGARRVFAFASHGLFNGPANVRLAESELSE
VVVLDTIPLTAELANNPKIVQLSVAHLLAQAVFNIHNKKSISALFK*
back to top

mRNA from alignment at H-elongata_contig10822:1471..8435+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10822.668.1 ID=mRNA_H-elongata_contig10822.668.1|Name=mRNA_H-elongata_contig10822.668.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6965bp|location=Sequence derived from alignment at H-elongata_contig10822:1471..8435+ (Himanthalia elongata Himel1 dioecious)
GCGCTCTCTACATGTAAGAACAGCTTTCCGGGGACTAAGGGTATTTCACT CTAGTACCAGCCGTCAGGGGTTCGAGGACTCGGAGTGGGGCGATAAAAGG TGTTCTGGGTGGGCAATAGCCGCGGCCGCCTTGACTGCGGCGTGTGGAGT AGCTCTGAAGTCGGACGTGAAAGGGGTCGGGTGCGAGCGCTCGGAGAGGG GCCATACCGGGGACATGGAAGGCAGGGGGGCGGGATGGGTCACCAGGGAA GACTCAAGGTCGGCCATGTGGCCGAACAAGGACCGACCAAGTGAGCAAAC CAACCGATCGACATCGCGATCAGGCCGTAGTTTTATCACGTCTTGTGGAG CAGCGAGGGGTCCTTTTTTAATAACAAACGTCGTTATATATTATCAAGAT GGTGGATAGAACAGATATTAGTTGTTGTAAGCCGTTTTTGTAATATAATT CCCCAACCCTATTATTTTCAGCTTAACATCAAAGATACCCCTTAAGTCCG TCCTGAAAGCTAAGGCGCGCAACACTTGTCTACGCCCCCCGGCCACTGCT CGCCTTCCAAGTCGTTGATGAAATAGACGGAAATAATCTGCGGTTTTGCG TCGAGATGTTGCTGATCAGGTAAATAGGACGAAAACCTCTTGAGTTTGGT ACATTCAAAAAAAGTCTCGTATCGTTCGAGCTGGTAGATGACATTGAACC AACAGTGGTCTGGTTTAAACAAGCTTCAAACGCTTCAAACGAATCACTCC CCAAGACGATTCTAGTGTCTCAACAGTGCTCTGTTGATAGCACTCATTCC ACGATCACTGCTGCTTTCTTTTGATGAATGAAAATATCTTGTGTGTTTAA AGGTGACATCCGCATGCCCCACCGATGCGTCCGAATTGTGATATAACTGA TCTACAGCAGCCTAAAACGATGATAAACGAACCTGTATAATCGAAATCAA GTCAGTCAAATAATATTCTTGTCACAAGAGAAACGTCTCGGATCCCAGGC CTTGAGTTTTACGTCCCGCACTGGCCGCCGCTATTTCACTCACATGCAAC ACAAAAACGTGCGGAAATTGGGATGACACAGAATCCGGGGGCATGAAAAT TTTCTCGGGCAACGCTAACCCCGCCCTGGCCAAAGACATCGCGGCGTATC TGGGGATCAATTTAGGCAGGGTGAAGGTGAGAAAACGCCTCCATGTTTGT AAGGGGACGGGGTAGGATAGTTAAAGCCCCTATTCCACCGTCTTTATTTT ATTTTTTGACATTTTCGATCATGCAAGGGCGTTTTCCAGCGTGGCCTTGA ACAGTCGTGCTCGCTGGGTTTGCCAGTTATGGTCTAGTGACTGGCACCAC CGCTGGTCAGGAATGCAGACTCAGACCCCCGCTCTCCTGGTCTACACATA TAATGGAAACCTCGCTATGTGCTCTCTTTACACGTTGAGAGCAGGTGTGT TGCAGAACGAAACGGCAAACTCTCTGTTTCACGTTTTCCGGCACACATCC ACACATCCAGATACACGTACCTACGTACGCGCTAATGAGCCAGTCAAACA ACCCACGGTTCGCTTGTACTGCTCTCCTAAGGCGGGGTTTCCCCGATGCC CTCGCCAAGATAGGAGCAGTATGTGATGGGGCACTGCTTTCCTGTCCTAC ATAGTCTTGTAATTGTAGATGGCACTTCACAGCACAGCAGATCTTGCGCC ACTCCTTCCGAATGAGTCTGTGTTTGATGTGAACGTTACATAGTGTTTTA TTACGTTTCGCGTGCGTGTTGTTTCGTTTCGTGAATGTGCCCAACTTTTA ATGATTACAGGTGGACCGTTTTGCTGATGGCGAGGTCAACGTGATTGTAA AGGAAAACGTCCGCGGGAAGGACGTTTACATCATTCAGCCCACATGTATG CCGGTAAACGAGAACCTTGTGGAGCTCCTGCTCATGGTGAGGATTACTTC TTCCTTATGTACTGTCTGATAGCTGCCTTTTGACCCCGACAAGCTATCCC TCCCGCGAGACGTTAAATAGGACACAAAATTACAGGCAGTATCGGAGGCA GCGTGTTTTGCCATCCCATATATTCTGGACATCAAACTAAGTGGACGGAC CAGACGGGGCCACACAAGGGGAAGGTCACTTTTCTACCTTTCTTTTATCG ACAGAAGGATTCAGCTGTCTCTTTCCCTCGTCAACCGTGAATAGTATACT GTATATAGTATGTCGAATTTTGTGTTCCCACGAAATAATCGTTCTCCGCT TGTTGGGTTCGATGCGAGAGAAAATCCCAGTTCGTGTGACTGCACCGAGA TTCGAAAACTCACGTCCCAACGTCAGAAGGTTTCGAGATTACGAACTGAA CCACCGGGGCGACCGTTCGTTCAGTGTTTATTTCTGCTTTCCGATGCTGA GGCAAAATCGACCACATTGAACTCCCGTCCGTGTATTTGCACTGTACTGT TAAGCGTAAAGCGATGTACTATTATTTTATGTAGTGTGTACCCACTCGTT GTAAGCAGCTGCTGTATGCTCCTAAGGAGGAAGTAGCTTAGCTGGCACGG ATTCCCCCGTGGATGTGATACGCAAAGATGCGCCCGCGTTGGTTATGATA TAACAGGAGAGAAAATAGGCACACCAGGGATGCGAGTGCTCGTTTGGTTT GTTGCTTGCCTCTCTTTGCCAGGTGAGCACGATGCGTCGCTCTTCCGCAA GGCGCATCACAGCGGTGATACCGTACTATGGGTATGCCAGGCAGGACCGC AAGATGACGGCAAGGGTGCCAATATCCGCCGCCGATGTGGCCCGACTGAT GGAGGCCATGGGTAAGAGAGAGACATCCCGAACGTCCATATACAAGAGCA TGCATCCCACCCCATTCCGTCCCGTTTTGCGTTGTTATACCGTACCGCGT ACTGTGGTTTTCGTGGGTGTCATAGTTTAAGAGGGAGGAATTAACATCGT GCCTCGACTTCAGACGAAACACTTTTACGAGCGAGACGCTTGGCTCGTTT GTAGCATCTCGGAGGGCGATCGCTCGGTCGACTTTGATCGATCACGGAAA TCAAGCTACTAGTTTGTGGTGGCCGCACGACACGCGCGTGATCGTGATCT GCGAAGCTGACGCATCCAAAGAGCTCATGTAATCAAATAGGACCGGTACC GATCGGCGTGGTTGCCCCTGTTTAGGCTAGATACATCCCCTGTGAAAACT AAATAGGATCCTATCTCGCTTATCCCCCAAATTTGCCTTTGCTACGGTGT GCCGTCCTGACGGGACGTGATCGGGATTGAAATGCTGACGGTGGCCAAAC GACCAAAAGGGGTGGACCGGGTGGTCGCCGTCGATCTTCACTGCGGACAG ATCCAGGGATTTTTTGGACCTCGCGTCCCCGTGGATAACTTAGACGGAGG CGTTATCGGAGTGGGGTACTTTGGGGATACGAATCTACACAACCCTGGTG CGAGCAAGTGCCTAAACTTTACTAAAGCACCAGGTAGTGGTTCTCATGTT TCTCTACGCCACCCCCGCTGCGGCCCCCATTATTTCAATATAATGTTTGG TGTCTACGCTGTATTCGTGAGGGCGGACTGTTTTGGGGCTGCTTCTTAAC ACATTAAAGTTTACGCTTGCACGCGTACACAAATGCTTTATCATATGCTC GGCCGCCTCCCTGTCGCTCACGGGTTTTCGACATGTACTAATTCATTTTT CTCGTTTCTTGAGGAAGTTTTTGGCTTGTCGAGGAATAAACAGCGAAGTC GTGTTTTCGAAGCAGATTCAACCAAACCAGAAGAGACTCAAAGTTGTTCA CGAAGGGGGCATATTCGGGTGGGGTCGGGAACTGATGTATCAATGCATAT ACCGTAATTGATATCCTCGCTTCTATATTACTATGTCGGTCAGTATCGTG AGCGTGTAATATTTTATTGGGGGAAGGGGTCGGAAAACAAACATGTATTT GTCCTCTTTTTGATTGTGGGGGGCGGTGGGGCATGGTGGTGCAGTGGTGG TTTCCCCGGACGCGGGAGGCGTTTATCGTGCAAAAAAGTTTCGCGAAGGA CTGGCTCACCGCTACGGACTCGACGCCGGGTTGGCCATGATCATCAAGCA GAGGGCTAAAGCCAACGAGGTATGGGCGGCCAAAGGCATTGATCTATATT AGTTGGGAAAATATACTTTCAGTCGAGCAGTATACACGCTGCACACTGTA AAATAAGCCTAAACCTTACGCGCACCTTCACTGCTGTAATATCCACCCTC GAGGATCTGTGGTTTGGCGTGCAATGCTCTATGCAGTTTACTGTGTACAC TTTGTTGCAGCGATACCGTAATGGTTTTTCCCATGCCCACCGTGTCTACT GCATATTCTGTTTTAAGATGTTTGGGTGGCGTCTTCGAGGAGGGGGTAGC TAGCGTGCGTCCCCGGATGAAGTGGTCGCCAATTGTCAATGATAGTGGTC GCTGCCCTTCCCATCCTTGAAACAGAGAGTGAGGGGGATAATAATAAAAT TGAAAAAGAAAACTGCCATTAAAATATACCGGCGCTTGTTGTGCCCCCTC ACGTCAGCGTTACTTCATCGCCCCCCTCTCCCACCCGGGGGCTTTCCCAG GTAGACCGCATGGATTTGGTGGGTAGCGTGGAGGACTCGGACGTGATCAT CATTGATGACATGATCGACACCGCTGGAACGCTGTGCAAGGCGGCAAGCG TGATAAAGCAGAACGGAGGTGAGGCGCGCAAATATTTCAATAAACCCTCC ACCCACGCCAACTCTCTACAGCTCTCGACCTCCGCCAGCTGGGGACTGGG AAAGAAAATCGTAATTAATTGGGTTCGTTGAGAGTATTAGCTCTAGATAT CATGCAGAAGCCCTCGAGAAAAATGTCACGAAGTAGAATAACCCCCCCCC CCGAACAAACCCTGCTCTGCGCGAACTCAAAGGACTCCCCCCCCCAGAAG CCTCCTTTTTTCATGACAAATCCTTTAATATCCACCCATTCCCACCATCT CTCTTTCTTTCTCTCTCCCACATCCTCTCTTTTTCTCTCTAAAGCTCGCC GCGTTTTCGCGTTCGCATCGCACGGACTGTTCAACGGCCCCGCGAACGTC CGTCTAGCAGAGAGCGAGCTTTCCGAGGTGATGGGAGAGATATAGAGATA TCATGACTTGCGTACCTCGTTTCCAAGGCGATGCGGGAATGATTCGAATC CGTCGGGACCTTATGTCGCAGAGCCGTGTTCCTCAAGTGAAGAAAATGCT GGTAACATACATACAGTACCATGCCCTTTACCTTAAGGACGTCGCAGACG TTTTTCTAGGAGATGATCACCATGCCCCCCATCTCTTCCCCAGGCGGGCC GAGCGGCGATAAGGAGCTTGTGAGCTCCGAACGTGGGGTAGCAGCTTGAC TTGATATTTTTCTTTGACTTCTAGCTCTCTAGCTACACGTTGCGTGTCGT TTAATACCTTAAGCGCTAGCCCGATGCACATACGTGCCCTCCCTTTGATC GGAATATGCAAATCGAAAACCCCATCACTTTCTAGTATATATTTTCCTCT GGGAGATATCATCGTATTACTGATCTGAAGCAAAAGCAAGATGTACGTAA TTGGTTTTTCTCGATCCGTCCCCTCCCGTCCCCGTACGTGACCCCTCCAT GGGGGGCGAACCCGTTTACTGTAGGTGGTGGTGTTGGACACCATTCCTCT GACCGCGGAGCTTGCCAACAACCCGAAGATCGTCCAGCTGTCGGTGGCGC ATCTCCTCGCGCAAGCCGTCTTCAATATTCACAATAAGAAGTCGATATCC GCGCTCTTTAAATAGTTGTGGCTGGAATCTTTAAAAATAAATACTGCAAG CTATTAACTATTCTTACGTGCTTTTGACTTGGCTTGGGTACGTTTCTTTT GTATTGTTTTGCCTCGTCTACGGCGTAAAAGGTAACGCTTGCGGATGAAA TGAGCGAGTGTCATAAACTGTCCATGAGGAGGTTGGAGCGGAATCCTCGC GTAGAAAAAAAAATAGTCCGGACTAAAAAGCCCAGCTTCGGAGGGGGGAA ATAGATGGCTGGTAATACCGATAAAGGTGTGAAAAGCCCAATGACTGCGA TTGAAAGAAACACTGTTGTCGGGAGTGACCTTAGTGGTGTGGTATGATTA ACGTCGGGAGTAACCTCAAGTCAAGCTGCGGCGCATTGTACTGTAGGAAC TGAAAATTATTATGGGATGCCTGAAGGGATGGCTTCAGGAAGGGATACAG TGCATTCGCCATTGCTAGGGATATAAATCCAACGCGCCCATCCAAAGGTT TTTGTGGTGGAACGTCGGTTTTTGCTTCGACCCCGTTTCAGAGGTCGGTC TTAAACATTTTTTTTGTAATTTACGTGCAGTTTTCGTCACGGGATAATTA GCGTATGACAACGTAGCTCGAGGAGAGAGCGGAAATTCTTATGGAACAAT GGAATGTTTACGACAACGGAAGGTACGCATGGTTTATTCTCCATCCCATT GGATCTCCATGCTGTTAGTCTTCGTGTGCAACGCGGTATTATTAGTGGCC TGATCCGTGCGCGGGTGGCATATTACTTCACCATTTCTTCAGCACCGCGG TAGTATTTGGTGAGCGTGATCCGGGATGGTGCAGTATGTGCCTTGAAGCG CACAAGCCACGATTTCCGATTCGCTTTTATGCTTTCGGAGTCAGGTGAGC ATGGTCAGGGGAAAGAAGGCGTCAGCGTTGTTACAGCGAGATCGTTCGTT GCTGCATTATTCAGAGCGAGGCACTGGGACACGCTGCAGCTGCCAAATAA AACGAGAGCTGGTCGCCGAGGATAAAGGAAACACGACCCAGATTGTGGGG ATGCCGGCACCCCAACCAAATTGTAAAGTTAATGTGGGGGTACCCCTCTG CGGTATTTAAAGAGATTCCCAAAATGATAATGACAATCATGCATGCCATA GTATTCGAACACCCT
back to top

Coding sequence (CDS) from alignment at H-elongata_contig10822:1471..8435+

>mRNA_H-elongata_contig10822.668.1 ID=mRNA_H-elongata_contig10822.668.1|Name=mRNA_H-elongata_contig10822.668.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2082bp|location=Sequence derived from alignment at H-elongata_contig10822:1471..8435+ (Himanthalia elongata Himel1 dioecious)
ATGGAAGGCAGGGGGGCGGGATGGGTCACCAGGGAAGACTCAAGGTCGGC
CATGTGGCCGAACAAGGACCGACCAAATGGAAGGCAGGGGGGCGGGATGG
GTCACCAGGGAAGACTCAAGGTCGGCCATGTGGCCGAACAAGGACCGACC
AAAATCCGGGGGCATGAAAATTTTCTCGGGCAACGCTAACCCCGCCCTGG
CCAAAGACATCGCGGCGTATCTGGGGATCAATTTAGGCAGGGTGAAGAAT
CCGGGGGCATGAAAATTTTCTCGGGCAACGCTAACCCCGCCCTGGCCAAA
GACATCGCGGCGTATCTGGGGATCAATTTAGGCAGGGTGAAGGTGGACCG
TTTTGCTGATGGCGAGGTCAACGTGATTGTAAAGGAAAACGTCCGCGGGA
AGGACGTTTACATCATTCAGCCCACATGTATGCCGGTAAACGAGAACCTT
GTGGAGCTCCTGCTCATGGTGGACCGTTTTGCTGATGGCGAGGTCAACGT
GATTGTAAAGGAAAACGTCCGCGGGAAGGACGTTTACATCATTCAGCCCA
CATGTATGCCGGTAAACGAGAACCTTGTGGAGCTCCTGCTCATGGTGAGC
ACGATGCGTCGCTCTTCCGCAAGGCGCATCACAGCGGTGATACCGTACTA
TGGGTATGCCAGGCAGGACCGCAAGATGACGGCAAGGGTGCCAATATCCG
CCGCCGATGTGGCCCGACTGATGGAGGCCATGGGTGAGCACGATGCGTCG
CTCTTCCGCAAGGCGCATCACAGCGGTGATACCGTACTATGGGTATGCCA
GGCAGGACCGCAAGATGACGGCAAGGGTGCCAATATCCGCCGCCGATGTG
GCCCGACTGATGGAGGCCATGGGGGTGGACCGGGTGGTCGCCGTCGATCT
TCACTGCGGACAGATCCAGGGATTTTTTGGACCTCGCGTCCCCGTGGATA
ACTTAGACGGAGGCGTTATCGGAGTGGGGTACTTTGGGGATACGAATCTA
CACAACCCTGGGGTGGACCGGGTGGTCGCCGTCGATCTTCACTGCGGACA
GATCCAGGGATTTTTTGGACCTCGCGTCCCCGTGGATAACTTAGACGGAG
GCGTTATCGGAGTGGGGTACTTTGGGGATACGAATCTACACAACCCTGTG
GTGGTTTCCCCGGACGCGGGAGGCGTTTATCGTGCAAAAAAGTTTCGCGA
AGGACTGGCTCACCGCTACGGACTCGACGCCGGGTTGGCCATGATCATCA
AGCAGAGGGCTAAAGCCAACGAGTGGTGGTTTCCCCGGACGCGGGAGGCG
TTTATCGTGCAAAAAAGTTTCGCGAAGGACTGGCTCACCGCTACGGACTC
GACGCCGGGTTGGCCATGATCATCAAGCAGAGGGCTAAAGCCAACGAGGT
AGACCGCATGGATTTGGTGGGTAGCGTGGAGGACTCGGACGTGATCATCA
TTGATGACATGATCGACACCGCTGGAACGCTGTGCAAGGCGGCAAGCGTG
ATAAAGCAGAACGGAGGTAGACCGCATGGATTTGGTGGGTAGCGTGGAGG
ACTCGGACGTGATCATCATTGATGACATGATCGACACCGCTGGAACGCTG
TGCAAGGCGGCAAGCGTGATAAAGCAGAACGGAGCTCGCCGCGTTTTCGC
GTTCGCATCGCACGGACTGTTCAACGGCCCCGCGAACGTCCGTCTAGCAG
AGAGCGAGCTTTCCGAGCTCGCCGCGTTTTCGCGTTCGCATCGCACGGAC
TGTTCAACGGCCCCGCGAACGTCCGTCTAGCAGAGAGCGAGCTTTCCGAG
GTGGTGGTGTTGGACACCATTCCTCTGACCGCGGAGCTTGCCAACAACCC
GAAGATCGTCCAGCTGTCGGTGGCGCATCTCCTCGCGCAAGCCGTCTTCA
ATATTCACAATAAGAAGTCGATATCCGCGCTCTTTAAATAGGTGGTGGTG
TTGGACACCATTCCTCTGACCGCGGAGCTTGCCAACAACCCGAAGATCGT
CCAGCTGTCGGTGGCGCATCTCCTCGCGCAAGCCGTCTTCAATATTCACA
ATAAGAAGTCGATATCCGCGCTCTTTAAATAG
back to top