mRNA_H-elongata_contig107964.650.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig107964.650.1 vs. uniprot
Match: D7FHD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHD1_ECTSI) HSP 1 Score: 102 bits (253), Expect = 1.100e-23 Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 1
Query: 1 GMFLADRILLGGAVAESCTRALVPGYRDRIYRHEAGHFLVAYLLGCPVQGCLLDPFVVSLVQRGIQG 201
G+ ADR+LL GA++ES TR +VP YR+RI RHEAGHFLVAYLLGCPVQ CLLDPFV+ G QG
Sbjct: 261 GLIFADRLLLNGALSESLTRLIVPAYRERIIRHEAGHFLVAYLLGCPVQACLLDPFVLGSGLTGAQG 327
BLAST of mRNA_H-elongata_contig107964.650.1 vs. uniprot
Match: A0A7S0VT99_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VT99_9CRYP) HSP 1 Score: 78.6 bits (192), Expect = 1.310e-15 Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 7 FLADRILLGGAVAESCTRALVPGYRDRIYRHEAGHFLVAYLLGCPVQGCLLDPFVVSLVQRGIQG 201
FLADRIL+ GAV ES R L P Y+ ++ +HEAGHFL+AYLLGCP+QG L + S G+QG
Sbjct: 35 FLADRILVSGAVLESIYRFLFPQYKQKVVQHEAGHFLIAYLLGCPIQGFFLSAWDAS--SAGLQG 97
BLAST of mRNA_H-elongata_contig107964.650.1 vs. uniprot
Match: A0A7S1EHK9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EHK9_HEMAN) HSP 1 Score: 78.6 bits (192), Expect = 1.410e-15 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 7 FLADRILLGGAVAESCTRALVPGYRDRIYRHEAGHFLVAYLLGCPVQGCLLDPFVVSLVQRGIQG 201
FLADR+L+ GAV ES R L P Y+ ++ +HEAGHFL+AYLLGCP+QG L + S G+QG
Sbjct: 154 FLADRVLVSGAVLESIYRLLFPKYKSKVVQHEAGHFLIAYLLGCPIQGFFLSAWDAS--SAGLQG 216
BLAST of mRNA_H-elongata_contig107964.650.1 vs. uniprot
Match: A0A7S0XWC1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XWC1_HEMAN) HSP 1 Score: 78.6 bits (192), Expect = 1.950e-15 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 7 FLADRILLGGAVAESCTRALVPGYRDRIYRHEAGHFLVAYLLGCPVQGCLLDPFVVSLVQRGIQG 201
FLADR+L+ GAV ES R L P Y+ ++ +HEAGHFL+AYLLGCP+QG L + S G+QG
Sbjct: 152 FLADRVLVSGAVLESIYRLLFPKYKSKVVQHEAGHFLIAYLLGCPIQGFFLSAWDAS--SAGLQG 214
BLAST of mRNA_H-elongata_contig107964.650.1 vs. uniprot
Match: A0A835YLP7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP7_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 3.000e-15 Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 1 GMFLADRILLGGAVAESCTRALVPGYRDRIYRHEAGHFLVAYLLGCPVQGCLLDPFVVSLVQRGIQG 201
G+F DRI+L GA+ ES R + P Y+ +I RHEAGHFL+AYLLG + GCLLDP+ V RG G
Sbjct: 197 GVFALDRIVLKGALFESIARIINPTYKAKIIRHEAGHFLLAYLLGLGISGCLLDPWQVRKFVRGQGG 263
BLAST of mRNA_H-elongata_contig107964.650.1 vs. uniprot
Match: A0A7S2WUW6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUW6_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.290e-14 Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 1 GMFLADRILLGGAVAESCTRALVPGYRDRIYRHEAGHFLVAYLLGCPVQGCLLDPF 168
G FL DR++ GA+ E+ RA+ P YR+++ RHEA HFLVAYLLGCPV+ C++ F
Sbjct: 260 GFFLLDRLVFQGALFETAYRAVAPQYREKVIRHEAAHFLVAYLLGCPVESCIISAF 315
BLAST of mRNA_H-elongata_contig107964.650.1 vs. uniprot
Match: A0A7S3FEW8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FEW8_9EUKA) HSP 1 Score: 73.6 bits (179), Expect = 3.830e-14 Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 16 DRILLGGAVAESCTRALVPGYRDRIYRHEAGHFLVAYLLGCPVQGCLLD 162
DR LL GA+ ES TRA+ PGY + HEAGHFL AYLLGCP++ CLLD
Sbjct: 2 DRALLRGALGESITRAVKPGYARTVREHEAGHFLAAYLLGCPIEACLLD 50
BLAST of mRNA_H-elongata_contig107964.650.1 vs. uniprot
Match: A0A7S0LZG5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZG5_9CRYP) HSP 1 Score: 74.3 bits (181), Expect = 5.070e-14 Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 7 FLADRILLGGAVAESCTRALVPGYRDRIYRHEAGHFLVAYLLGCPVQGCLLDPFVVSLVQRGIQG 201
F+ DR LL GAV ES R L P Y++++ +HEAGHFL+AYLLGCP+QG L + + GI G
Sbjct: 246 FIVDRALLSGAVFESVYRLLFPQYKEKVIKHEAGHFLLAYLLGCPIQGFFLSAW--DATKAGISG 308
BLAST of mRNA_H-elongata_contig107964.650.1 vs. uniprot
Match: W7TJA2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJA2_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 5.320e-14 Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 7 FLADRILLGGAVAESCTRALVPGYRDRIYRHEAGHFLVAYLLGCPVQGCLLDPFVVSLVQRG 192
F DR LLGG ++ R ++P Y++RI RHEAGHFL+A+LLGCPVQ C+L P ++G
Sbjct: 325 FFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVLRPVFNGRWEKG 386
BLAST of mRNA_H-elongata_contig107964.650.1 vs. uniprot
Match: A0A7S2ECE3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ECE3_TRICV) HSP 1 Score: 73.9 bits (180), Expect = 7.330e-14 Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 4 MFLA--DRILLGGAVAESCTRALVPGYRDRIYRHEAGHFLVAYLLGCPVQGCLLDPF 168
+FLA DR+L+ GAV E+ R ++P Y +I +HEAGHFL AYLLGCPV+GC+L P+
Sbjct: 247 LFLAFMDRLLVNGAVFETAMRTVMPKYGKKILKHEAGHFLCAYLLGCPVEGCVLSPW 303 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107964.650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig107964.650.1 >prot_H-elongata_contig107964.650.1 ID=prot_H-elongata_contig107964.650.1|Name=mRNA_H-elongata_contig107964.650.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp MFLADRILLGGAVAESCTRALVPGYRDRIYRHEAGHFLVAYLLGCPVQGCback to top mRNA from alignment at H-elongata_contig107964:147..350- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig107964.650.1 ID=mRNA_H-elongata_contig107964.650.1|Name=mRNA_H-elongata_contig107964.650.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=204bp|location=Sequence derived from alignment at H-elongata_contig107964:147..350- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig107964:147..350- >mRNA_H-elongata_contig107964.650.1 ID=mRNA_H-elongata_contig107964.650.1|Name=mRNA_H-elongata_contig107964.650.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=402bp|location=Sequence derived from alignment at H-elongata_contig107964:147..350- (Himanthalia elongata Himel1 dioecious)back to top |