mRNA_H-elongata_contig107637.628.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig107637.628.1 vs. uniprot
Match: D8LSU9_ECTSI (Acetyltransferase 1-like n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSU9_ECTSI) HSP 1 Score: 254 bits (649), Expect = 3.660e-72 Identity = 152/233 (65.24%), Postives = 169/233 (72.53%), Query Frame = 2
Query: 503 PPVDADPLGLTLLEKDPLLEAARLVALLSSHAGADVETHLLAFDVAVKRGKYLLAARAVVRGRALEPHNPELLLRSIQLYHLAQTSPCAAGQ-------GDTKTDGAKADLPEPPSPIVARVLAEEAEGLLGTGGLKGAVTALVALAEDPKRGSLEARVCAAKALLLTGNE--RDQAIALVRGGLGGRGVTVAACVGAVKTVEAI-GSGGGQAAQELREACREAFPIAEAFGS 1171
PPVD DPLGLTLLEKDPL EAARLVALLS+HAGA VETHLLAFDVA++RGKYLLAARAV+RGRALEP NPELLLR+IQLYH AQ +P + GQ D + + P P+VARVLAEEAEGLLGTGGL GAV LV LAED + GSL ARVCAAKAL LT E R+QA+ +VR GL GRGVTV C AV+ V + G G A + LRE C FP AE F S
Sbjct: 738 PPVDPDPLGLTLLEKDPLPEAARLVALLSAHAGAYVETHLLAFDVAMRRGKYLLAARAVIRGRALEPRNPELLLRTIQLYHEAQATPPSPGQPAASCAPADGSSTPSPTTGPXXXXPLVARVLAEEAEGLLGTGGLAGAVAELVRLAEDAETGSLGARVCAAKALSLTAAEQGREQAVRIVREGLDGRGVTVPGCANAVEAVRGVVGEDGSAAVEALREVCGNTFPNAEVFKS 970
BLAST of mRNA_H-elongata_contig107637.628.1 vs. uniprot
Match: A0A835YWJ9_9STRA (Acetyltransferase 1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ9_9STRA) HSP 1 Score: 107 bits (267), Expect = 3.300e-21 Identity = 95/235 (40.43%), Postives = 119/235 (50.64%), Query Frame = 2
Query: 473 KRRTRGGAAPPPVDADPLGLTLLEKDPLLEAARLVALLSSHAGADVETHLLAFDVAVKRGKYLLAARAVVRGRALEPHNPELLLRSIQLYHLAQTSPCAAGQGDTKTDGAKADLPEPPSPIVARVLAEEAEGLLGTGGLKGAVTALVALAEDPK--RGSLEARVCAAKALLLTGNERDQAIALVRGGLGGRGVTVAACVGAVKTVEAIGSGGGQAAQELREACREAFPIAEAFGS 1171
K+R R G PP D DP G L EK+PL EAAR+ +LS A VET L FDVA++RGK+LLA RAV +GRA+ P +P +L R+++LYH K D LPE A VLA+E LL L A+ A A +G LEA AA LL ++ A ALV GGL GV+ AAC A+ + QA + C FP A AFG+
Sbjct: 679 KKRGRHGQEIPPDD-DPNGQKLAEKEPLPEAARIAGILSRQAAGHVETWALVFDVAIRRGKWLLALRAVCKGRAIAPSDPGMLRRTVELYH--------------KLDALAEPLPE----RAAAVLADERADLLDGMSLADYAAAIQARAAMAATLQGRLEATRTAA--LLSPEDKGAAAAALVAGGLECGGVSAAACREALAVLRGEFEAQAQA-DAFQVLCATKFPQATAFGT 891
BLAST of mRNA_H-elongata_contig107637.628.1 vs. uniprot
Match: A0A7S4J4Q3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4Q3_9STRA) HSP 1 Score: 100 bits (248), Expect = 8.450e-19 Identity = 76/234 (32.48%), Postives = 120/234 (51.28%), Query Frame = 2
Query: 461 NAHNKRRTRGGAAPPPVDADPLGLTLLEKDPLLEAARLVALLSSHAGADVETHLLAFDVAVKRGKYLLAARAVVRGRALEPHNPELLLRSIQLYHLAQTSPCAAGQGDTKTDGAKADLPEPPSPIVARVLAEEAEGLLGTGGLKGAVTALVALAEDPKRGSLEARVCAAKALLLT--GNERDQAIALVRGGLGGRGVTVAACVGAVKTVEAIGSGGGQAAQELREACREAFPIA 1156
N +NK+ A VD DP G+ LL+ DPL EA + A+LS++A V T +L +DVA++RGK L+A +A+++ RALEP N E+ R++ + +P + K VL +E+ LLG V A A++ SL R+ AKAL+ T G+ + ++ GG+ GRGV+V +C A+K + + G G + ++ E ++ FP A
Sbjct: 690 NGNNKKGKGKSAQQAVVDEDPDGVALLKLDPLEEAKKFSAILSTNAPTRVSTWVLQYDVAIRRGKQLMALQALLKARALEPENSEVFKRTVDFVQ--RPAPDVSSNATVKD-----------------VLKQESSNLLGEKSPTQFVMDAAARAKENMLTSLPMRIAVAKALISTKAGSVTEATSLIIDGGIDGRGVSVDSCCEALKCLCSFGEGATKGKEKWLELAKKRFPFA 904
BLAST of mRNA_H-elongata_contig107637.628.1 vs. uniprot
Match: A0A7S3LAC1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LAC1_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.010e-18 Identity = 80/265 (30.19%), Postives = 136/265 (51.32%), Query Frame = 2
Query: 380 RRLQEVALAKENANGASKNSEGTGEKKNAH-NKRRTRGGAAPPPVDADPLGLTLLEKDPLLEAARLVALLSSHAGADVETHLLAFDVAVKRGKYLLAARAVVRGRALEPHNPELLLRSIQLYHLAQTSPCAAGQGDTKTDGAKADLPEPPSPIVARVLAEEAEGLLGTGGLKGAVTALVALAEDPKRGSLEARVCAAKALLL--TGNERDQAIALVRGGLGGRGVTVAACVGAVKTVEAIGSGGGQAAQELREACREAFPIAEAF 1165
+R + +A K+ GA K E EKK+A+ +K +T P +D DP G LL+KDPL E+ + ++L+ +A D++T +L +DVA++RGK L+ +A+ + RA++P N L R + +T SPIV+++L +EA L+G L+ V + VA + L R AKA++ G + A + + GL + V+V AC A+ +E++G G +A + + ++ +P+A AF
Sbjct: 656 KRAKAIARKKKRKTGAEKKEEA--EKKSANGDKGKTGKNGKPSFIDEDPDGEELLKKDPLEESNKFSSMLAMYAPKDIQTWILRYDVAIRRGKALICLQALHKARAIDPDNSALFTRIVDFEKKRRTFTGL-------------------SPIVSKLLNDEAPSLVGNVSLQDFVESTVARVREIPTTDLLLRAEVAKAMVSCQVGGASEAADIITKDGLDCKNVSVEACQTALAALESLGEGASKATADWKTLVKQKYPLAAAF 899
BLAST of mRNA_H-elongata_contig107637.628.1 vs. uniprot
Match: W7TVH9_9STRA (Tetratricopeptide repeat-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVH9_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.110e-17 Identity = 90/252 (35.71%), Postives = 129/252 (51.19%), Query Frame = 2
Query: 449 GEKKNAHNKRRTRGGAAPPPVDADPLGLTLLEKDPLLEAARLVALLSSHAGADVETHLLAFDVAVKRGKYLLAARAVVRGRALEPHNPELLLRSIQLYHLAQTSPCAAGQGDTKTDGAKADLPEPPSPIVARVLAEEAEGLLGTGGLKGA-VTALVALAEDPKRGSLEARVCAAKALLLTGNE---RDQAIALVRGGLGG---RGVTVAACVGAVKTVEAIGS---GGGQAAQELREACREAFPIAEAFGSC 1174
G+ K+ NK+ GG VD DP G+ L+E++PL E R+VA L+ HAG VETH+LA+DVA KRGK LLA +A++R AL P +P++ R++ + G G++ +G K + P A V+ E + LLG G+ VT V A SL + AA+ + L E + AI L+R L RG+TV G + VE +G G E+++ C + FP A F SC
Sbjct: 723 GKGKSTTNKKGGDGGKGV--VDEDPEGMKLIEREPLTEMKRVVAYLTRHAGKVVETHMLAYDVACKRGKALLALQALIRAHALRPMHPDVFRRTVHFW---------TGMGESGGEGGKQEWIASLHPTSAAVIDAEKQRLLGEKKNLGSYVTEYVEKARA--WSSLPHVLAAARGVALAKTEPGATEVAIGLIREELQKGQCRGLTVK---GLRQVVEVVGKELDAGSATVAEMKKLCHQYFPDALEF-SC 957
BLAST of mRNA_H-elongata_contig107637.628.1 vs. uniprot
Match: A0A7R9UD03_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD03_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 8.600e-14 Identity = 72/223 (32.29%), Postives = 108/223 (48.43%), Query Frame = 2
Query: 506 PVDADPLGLTLLEKDPLLEAARLVALLSSHAGADVETHLLAFDVAVKRGKYLLAARAVVRGRALEPHNPELLLRSIQLYHLAQTSPCAAGQGDTKTDGAKADLPEPPSPI-----VARVLAEEAEGLLGTGGLKGAVTALVALAEDPKRGSLEARVCAAKALL-LTGNERDQAIALVRGGLGGRGVTVAACVGAVKTVEAIGSGGGQAAQELREACREAFPIA 1156
P D DP G LL + PL EA++ ++L+ A ++TH+L++DV+ +RGK L++ RA+V+G + P +PEL R + G T D +A + + VA + E A+ G G+L R AA A L ++ +A+ +VRGGL GRGV+VA+C A++ V+A G A EL RE FP A
Sbjct: 707 PADDDPYGEKLLSRSPLSEASKFCSILNLRAPHVIDTHILSYDVSARRGKSLMSLRALVKGFEVAPRDPELFKRIVDFED-------GIASGRTPLDETQAGIVTSMASRWRREGVADFVHEYADFACGD------------------LGNLAMRTAAAAATAKLDSSKAAEALGMVRGGLRGRGVSVASCRAALQAVKAFA---GDEAAELEIEIRELFPSA 901
BLAST of mRNA_H-elongata_contig107637.628.1 vs. uniprot
Match: A0A7S2GKZ9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GKZ9_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 8.470e-12 Identity = 87/247 (35.22%), Postives = 121/247 (48.99%), Query Frame = 2
Query: 458 KNAHNKRRTRGGAAPPPVDADPLGLTLLEKDPLLEAARLVALLSSHAGADVETHLLAFDVAVKRGKYLLAARAVVRGRALEPH----NPELLLR--SIQLYHLAQTSPCAAGQGDTKTDGAKADLPEPPSPIVARVLAEEAEGLLGTGGLKGAVTALVALAEDPKRGSLEARVCAAKALLLTGNER--DQAIAL-VRGGLGGRGVTVAACVGAVKTVEAIGSGGGQAAQELREACREAFPIAEAFGS 1171
K+A NK++T +A PVD DPLG LLE DP+LEA RLVA+L+ A + T L+AFD A++R K LLA RA+V G +PEL++R + + +P AA Q P V + E LLG ++ A + + D KR L + AAKAL G + A+AL V GGL V+VA C A++ + + QA + R C +P A A G+
Sbjct: 725 KDAKNKKKT---SADRPVDEDPLGDKLLEADPMLEAKRLVAILTRFAPRHLSTQLVAFDTAIRRNKPLLALRALVMGGRCSGGGSFGHPELIVRLADFAVKYQGYNTPEAAEQQHLV-------------PAVREAVDLEISALLGGMSVE-AYLSKYSGDVDTKR-CLSKSLAAAKALSKIGKSTSVEAAVALIVEGGLDRMDVSVATCADALEFMRSELKASEQA-EAWRGVCLAKYPRAVALGA 952
BLAST of mRNA_H-elongata_contig107637.628.1 vs. uniprot
Match: A0A7S2XZS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZS4_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.810e-11 Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 2
Query: 473 KRRTRGGAAPPPVDADPLGLTLLEKDPLLEAARLVALLSSHAGADVETHLLAFDVAVKRGKYLLAARAVVRGRALEPHNPEL 718
KRR P PVD DP GL L KDPL+E+A++V+ L +A V + +LAFDVA++RGK LLA +AVVRG L H P++
Sbjct: 99 KRRQERLNRPIPVDEDPKGLKLAAKDPLVESAKVVSTLVCNAPRAVNSQVLAFDVALERGKVLLALQAVVRGARLGEHAPDM 180
BLAST of mRNA_H-elongata_contig107637.628.1 vs. uniprot
Match: A0A485KY61_9STRA (Aste57867_13451 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KY61_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.860e-11 Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 2
Query: 509 VDADPLGLTLLEKDPLLEAARLVALLSSHAGADVETHLLAFDVAVKRGKYLLAARAVVRGRALEPHNPELLLRSIQLYHLA 751
VD DP+G LL K L EA RLV++L HAG D+ THL+AFDVA +R K+LL +A+V ++ +P+ L+R +QLY A
Sbjct: 641 VDTDPVGDQLLAKSSLDEAWRLVSILQQHAGDDLNTHLVAFDVAFRREKWLLCLQALVAAHKIQEAHPQTLVRLVQLYSAA 721
BLAST of mRNA_H-elongata_contig107637.628.1 vs. uniprot
Match: A0A388M8A7_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M8A7_CHABU) HSP 1 Score: 75.9 bits (185), Expect = 6.300e-11 Identity = 61/173 (35.26%), Postives = 87/173 (50.29%), Query Frame = 2
Query: 506 PVDADPLGLTLLE-KDPLLEAARLVALLSSHAGADVETHLLAFDVAVKRGKYLLAARAVVRGRALEPHNPELLLRSIQLYHLAQTSPCAAGQGDTKTDGAKADLPEPPSPIVARVLAEEAEGLLGTGGLKGAVTALVALAEDPKRGSLEAR-VCAAKALLLTGNERDQAIALV 1018
PVD DP G LL+ D L EA++ + LL HA + ETHLLA++VAV++ K LLA R + + R ++PHNP+ I +HL P E +P+V V+ E + +LG L A + D GSL R V A LLL+ +++ A+ LV
Sbjct: 743 PVDTDPDGEKLLQVPDLLAEASKYLRLLQDHADSSFETHLLAYEVAVRKRKLLLALRGIKKMRRIQPHNPDGHRCLIGFFHLVDGLPV-----------------EDVNPVVMDVVTAERKEMLGAKSLVDCNEAFL----DEHSGSLSHRAVVAEMMLLLSPEKKEMALKLV 894 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107637.628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig107637.628.1 >prot_H-elongata_contig107637.628.1 ID=prot_H-elongata_contig107637.628.1|Name=mRNA_H-elongata_contig107637.628.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=316bp MYIPPRNPDGSSPSDGFWSRVPQARRDAKKRAAEQEQEKQRRLQEVALAKback to top mRNA from alignment at H-elongata_contig107637:62..2021- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig107637.628.1 ID=mRNA_H-elongata_contig107637.628.1|Name=mRNA_H-elongata_contig107637.628.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1960bp|location=Sequence derived from alignment at H-elongata_contig107637:62..2021- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig107637:62..2021- >mRNA_H-elongata_contig107637.628.1 ID=mRNA_H-elongata_contig107637.628.1|Name=mRNA_H-elongata_contig107637.628.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1896bp|location=Sequence derived from alignment at H-elongata_contig107637:62..2021- (Himanthalia elongata Himel1 dioecious)back to top |