mRNA_H-elongata_contig107469.616.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig107469.616.1 vs. uniprot
Match: D7FVI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI3_ECTSI) HSP 1 Score: 289 bits (739), Expect = 3.740e-93 Identity = 145/189 (76.72%), Postives = 168/189 (88.89%), Query Frame = 1
Query: 1 ERQVEATNARMGKLPAMSGMQLSFRRRGSTAEETTQDEALNQKRQLQTLFAMDTADAYRVFDSMEHFLCHPEYLRGQLQVQIDETTQSWMVARYHELDDAVLREILGKKMTAKTRKDLDDVSELTRVPLRSCHRHYDTIRRLLSNLEDSSALPHISVAKEVGEKIGLPLWLAAKYTAIVFLLHLRFQAR 567
E++V A+NAR+G LPAMS +QLSFRRRGSTAEETTQDEAL+Q+RQL+TLF DTADAYRVFD+MEHFL PE+LRGQLQVQ+ ETTQ+WMV RYHELDD+VLREILGKK+T+KTRKDLDDVSELT VPLRSCHR YD I+RLL NLEDS L H+SVAKEV +K+GLPL L+AKYTA+ FLLH+RF +
Sbjct: 45 EKEVSASNARIGNLPAMSRVQLSFRRRGSTAEETTQDEALSQRRQLETLFGKDTADAYRVFDTMEHFLRQPEHLRGQLQVQLGETTQAWMVERYHELDDSVLREILGKKVTSKTRKDLDDVSELTHVPLRSCHRQYDNIQRLLGNLEDSVILQHLSVAKEVQDKLGLPLRLSAKYTAVAFLLHVRFHVQ 233
BLAST of mRNA_H-elongata_contig107469.616.1 vs. uniprot
Match: A0A835YW80_9STRA (Acidic fibroblast growth factor binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW80_9STRA) HSP 1 Score: 129 bits (325), Expect = 5.890e-32 Identity = 76/178 (42.70%), Postives = 108/178 (60.67%), Query Frame = 1
Query: 28 RMGKLPAMSGMQLSFRRRGSTAEETTQDEALNQKRQLQTLFAMDTADAYRVFDSMEHFLCHPEYLRGQLQVQIDETTQSWMVARYHELDDAVLREILGKKMTAKTRKDLDDVSELTRVPLRSCHRHYDTIRRLLSNLEDSSALPHISVAKEVGEKIGLPLWLAAKYTAIVFLLHLRFQ 561
+MGK+P GM+ SFRRRGS+ EE + + AL++K+QL+ LF DT D LC P Q+ +Q+ WM+ Y+ LD+ VLRE LG+++ K RKDL DVSE T+ P++SC R +D +RR+++ LE+S H V E+ EK L LAA+Y + FLLH +F
Sbjct: 65 KMGKIP---GMEFSFRRRGSSVEEMSAEAALSEKQQLERLFLRDTKD-----------LC-PGTRLTQVTLQLSPAAAQWMIRCYYALDENVLREFLGRRLAGKVRKDLGDVSEATKTPVKSCRRQFDNLRRVMTMLEESHQY-HCYVMLELQEKFELGPSLAAQYMCVTFLLHHKFN 226
BLAST of mRNA_H-elongata_contig107469.616.1 vs. uniprot
Match: UPI000C206223 (acidic fibroblast growth factor intracellular-binding protein n=1 Tax=Onthophagus taurus TaxID=166361 RepID=UPI000C206223) HSP 1 Score: 116 bits (291), Expect = 6.280e-28 Identity = 58/139 (41.73%), Postives = 89/139 (64.03%), Query Frame = 1
Query: 145 LFAMDTADAYRVFDSMEHFLCHPEYLRGQLQVQIDETTQSWMVARYHELDDAVLREILGKKMTAKTRKDLDDVSELTRVPLRSCHRHYDTIRRLLSNLEDSSALPHISVAKEVGEKIGLPLWLAAKYTAIVFLLHLRFQ 561
L A D D YR + +E L +P L+ QL+ QI+ T+ ++ +Y+E DD+V+RE+LGKK+++K RKDLD+VSE T+V L+SC R +D ++R+ +E+ S S+ + + LP LA KY +VFL LRF+
Sbjct: 50 LIASDVLDHYRTYSLLEKLLSNPNKLQEQLEFQIEPQTRKLLIEKYYEFDDSVVRELLGKKLSSKHRKDLDEVSEKTKVALKSCRRQFDNVKRVFKEVEEKSG----SIVQNITTTFFLPEELAKKYACVVFLACLRFE 184
BLAST of mRNA_H-elongata_contig107469.616.1 vs. uniprot
Match: A0A6J1SQZ8_FRAOC (acidic fibroblast growth factor intracellular-binding protein n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SQZ8_FRAOC) HSP 1 Score: 115 bits (289), Expect = 1.290e-27 Identity = 60/140 (42.86%), Postives = 90/140 (64.29%), Query Frame = 1
Query: 145 LFAMDTADAYRVFDSMEHFLCHPEYLRGQLQVQIDETTQSWMVARYHELDDAVLREILGKKMTAKTRKDLDDVSELTRVPLRSCHRHYDTIRRLLSNLEDSSALPHISVAKEVGEKIGLPLWLAAKYTAIVFLLHLRFQA 564
L A D D YR + +E L +P L QL QI+ T+ +++ +Y++ DDAV+RE+LGKK++++ RKDLD+VSE TRV L+SC R +D ++R+ +E+ SV K V + LP LA +Y A+VFL +RF+A
Sbjct: 51 LVASDVLDHYRTYSLLEKLLHNPPKLAEQLAFQIEPQTRGFLIEKYYDFDDAVIRELLGKKLSSRHRKDLDEVSEKTRVQLKSCRRQFDNVKRVFKTVEEMQG----SVVKNVAKLFLLPEPLARRYGAVVFLACMRFEA 186
BLAST of mRNA_H-elongata_contig107469.616.1 vs. uniprot
Match: A0A8J5MWV7_HOMAM (Acidic fibroblast growth factor intracellular-binding protein-like n=3 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5MWV7_HOMAM) HSP 1 Score: 114 bits (284), Expect = 4.930e-27 Identity = 64/154 (41.56%), Postives = 92/154 (59.74%), Query Frame = 1
Query: 118 LNQKRQLQT------LFAMDTADAYRVFDSMEHFLCHPEYLRGQLQVQIDETTQSWMVARYHELDDAVLREILGKKMTAKTRKDLDDVSELTRVPLRSCHRHYDTIRRLLSNLEDSSALPHISVAKEVGEKIGLPLWLAAKYTAIVFLLHLRFQ 561
L Q+ +L+T L A DTAD YR F +E L P L + Q++ Q ++ +Y+E DD V+REI+GKK++ +TRKDLDDVSE T V LRSC R +D ++R+ L++ + L V + LP LA KY AIVF+++ RF+
Sbjct: 36 LQQRGELETWGATLELLASDTADHYRTFGMLEKLLLTPTKLAEEWTFQLEPAIQKMVIEKYYEFDDIVIREIIGKKLSGRTRKDLDDVSEKTGVLLRSCRRQFDNVKRIYKQLDEMNGL----VVANIQSIFLLPTVLAKKYAAIVFIVNNRFE 185
BLAST of mRNA_H-elongata_contig107469.616.1 vs. uniprot
Match: UPI00083BE878 (acidic fibroblast growth factor intracellular-binding protein n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083BE878) HSP 1 Score: 113 bits (283), Expect = 9.250e-27 Identity = 57/139 (41.01%), Postives = 91/139 (65.47%), Query Frame = 1
Query: 145 LFAMDTADAYRVFDSMEHFLCHPEYLRGQLQVQIDETTQSWMVARYHELDDAVLREILGKKMTAKTRKDLDDVSELTRVPLRSCHRHYDTIRRLLSNLEDSSALPHISVAKEVGEKIGLPLWLAAKYTAIVFLLHLRFQ 561
L A D D YR + +E L +P L+ QL+ QI+ T+ ++ +Y++ DD+V+RE+LGKK++++ RKDLD+V+E T VPL+SC R +D ++R+ +E+ LP S+ + + + LP LA KY IVFL +RF+
Sbjct: 51 LIASDVLDHYRTYSLIEKLLSNPNKLQEQLEFQIEPQTKQLLIEKYYDFDDSVIRELLGKKLSSRNRKDLDEVAEKTGVPLKSCRRQFDNVKRIYKTVEE---LPG-SITQNIQKLFYLPEELAGKYACIVFLACIRFE 185
BLAST of mRNA_H-elongata_contig107469.616.1 vs. uniprot
Match: UPI001E673BD4 (acidic fibroblast growth factor intracellular-binding protein-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E673BD4) HSP 1 Score: 112 bits (280), Expect = 2.970e-26 Identity = 62/154 (40.26%), Postives = 91/154 (59.09%), Query Frame = 1
Query: 118 LNQKRQLQT------LFAMDTADAYRVFDSMEHFLCHPEYLRGQLQVQIDETTQSWMVARYHELDDAVLREILGKKMTAKTRKDLDDVSELTRVPLRSCHRHYDTIRRLLSNLEDSSALPHISVAKEVGEKIGLPLWLAAKYTAIVFLLHLRFQ 561
L Q+ +L+T L DTAD YR F +E L P L + Q++ Q ++ +Y+E DD V+REILGKK++ +TRKDLDDV+E T V LRSC R +D ++R+ +++ + SV + LP LA KY AIVF+++ RF+
Sbjct: 36 LQQRGELETWGATLELLTSDTADHYRTFGMLEKLLLTPTKLAEEWTFQLEPAVQKMVIQKYYEFDDIVIREILGKKLSGRTRKDLDDVAEKTGVLLRSCRRQFDNVKRIFKQVDEMTG----SVVTNIQSVFLLPTRLAKKYAAIVFIINNRFE 185
BLAST of mRNA_H-elongata_contig107469.616.1 vs. uniprot
Match: A0A1Y1MMW7_PHOPY (Uncharacterized protein n=3 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MMW7_PHOPY) HSP 1 Score: 111 bits (278), Expect = 4.970e-26 Identity = 59/139 (42.45%), Postives = 85/139 (61.15%), Query Frame = 1
Query: 145 LFAMDTADAYRVFDSMEHFLCHPEYLRGQLQVQIDETTQSWMVARYHELDDAVLREILGKKMTAKTRKDLDDVSELTRVPLRSCHRHYDTIRRLLSNLEDSSALPHISVAKEVGEKIGLPLWLAAKYTAIVFLLHLRFQ 561
L A D D YR + +E L HP L+ QL QI+ TQ ++ +Y+E DD V RE+LGKK+++K RKDLD++ E T VPL+SC R +D ++R+ +E+ S+ + V + L LA+KY IVFL LRF+
Sbjct: 51 LIASDVLDHYRTYSLLEKLLTHPSKLQEQLAFQIEPKTQQLLIEKYYEFDDNVARELLGKKLSSKHRKDLDEICEKTSVPLKSCRRQFDNLKRVFKMVEEMPG----SLVQNVQKYFMLSPDLASKYACIVFLACLRFE 185
BLAST of mRNA_H-elongata_contig107469.616.1 vs. uniprot
Match: A0A7D9L1F0_PARCT (Acidic fibroblast growth factor intracellular-binding (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9L1F0_PARCT) HSP 1 Score: 107 bits (266), Expect = 5.640e-26 Identity = 52/102 (50.98%), Postives = 68/102 (66.67%), Query Frame = 1
Query: 145 LFAMDTADAYRVFDSMEHFLCHPEYLRGQLQVQIDETTQSWMVARYHELDDAVLREILGKKMTAKTRKDLDDVSELTRVPLRSCHRHYDTIRRLLSNLEDSS 450
+ D AD YRVF +EHFL P L QL +QI Q ++ RY+E D+ V+REILGKK+T + RKDLDD+SE T VPL+SC R YD I+ + +EDS+
Sbjct: 50 IITSDIADQYRVFLVLEHFLQTPPLLATQLMLQIPSGVQDRLIERYYEFDNTVVREILGKKLTTRLRKDLDDISERTSVPLKSCKRQYDNIKNIFKAVEDST 151
BLAST of mRNA_H-elongata_contig107469.616.1 vs. uniprot
Match: A0A8K0GGT5_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0GGT5_9COLE) HSP 1 Score: 111 bits (277), Expect = 7.150e-26 Identity = 58/139 (41.73%), Postives = 88/139 (63.31%), Query Frame = 1
Query: 145 LFAMDTADAYRVFDSMEHFLCHPEYLRGQLQVQIDETTQSWMVARYHELDDAVLREILGKKMTAKTRKDLDDVSELTRVPLRSCHRHYDTIRRLLSNLEDSSALPHISVAKEVGEKIGLPLWLAAKYTAIVFLLHLRFQ 561
L A D D YR + +E L +P L+ QL QI+ T+ ++ +Y+E DD+V+RE+LGKK+++K RKDLD+VSE T VPL+SC R +D I+R+ +E+ S+ + + + L LA KY +IVFL +RF+
Sbjct: 51 LIASDVLDHYRTYSLLEKLLNNPSKLQEQLAFQIEPQTRQLLIEKYYEFDDSVIRELLGKKLSSKHRKDLDEVSEKTLVPLKSCRRQFDNIKRIFKIVEEMPG----SLVQNIQKSFHLSEDLAKKYASIVFLACIRFE 185 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107469.616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig107469.616.1 >prot_H-elongata_contig107469.616.1 ID=prot_H-elongata_contig107469.616.1|Name=mRNA_H-elongata_contig107469.616.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=179bp MGKLPAMSGMQLSFRRRGSTAEETTQDEALNQKRQLQTLFAMDTADAYRVback to top mRNA from alignment at H-elongata_contig107469:55..1910- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig107469.616.1 ID=mRNA_H-elongata_contig107469.616.1|Name=mRNA_H-elongata_contig107469.616.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1856bp|location=Sequence derived from alignment at H-elongata_contig107469:55..1910- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig107469:55..1910- >mRNA_H-elongata_contig107469.616.1 ID=mRNA_H-elongata_contig107469.616.1|Name=mRNA_H-elongata_contig107469.616.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1074bp|location=Sequence derived from alignment at H-elongata_contig107469:55..1910- (Himanthalia elongata Himel1 dioecious)back to top |