mRNA_H-elongata_contig10714.592.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10714.592.1 vs. uniprot
Match: D7G264_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G264_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 7.110e-15 Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 2
Query: 2 IFKSLGLQSVDFLASILPTILQVTRRCEAGLRSSLLRQMQVLMRRLKRSMVPYLSDIISLVTHCWTEHMEEVIPLLKEI 238
IF S+G +SV FL +ILPT+ V RCEAGLRSSLL QMQ+L+R LK++M PYL I++L CW ++ P KE+
Sbjct: 931 IFASIGHRSVQFLGAILPTMFFVISRCEAGLRSSLLIQMQMLVRMLKKAMTPYLEAILTLAAQCWVTRLD---PNYKEV 1006
BLAST of mRNA_H-elongata_contig10714.592.1 vs. uniprot
Match: A0A835YM18_9STRA (Serine/threonine-protein kinase TOR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM18_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.590e-13 Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 2
Query: 2 IFKSLGLQSVDFLASILPTILQVTRRCEAGLRSSLLRQMQVLMRRLKRSMVPYLSDIISLVTHCWTEHMEEVIPLLKEIAGCI 250
IFKSLGL+ V FL ILP +L V RRCE GLR +LL+Q+ L +++ + +L I LV W E+ME+V+PL++E+A +
Sbjct: 274 IFKSLGLRCVPFLEHILPNMLHVVRRCEPGLRETLLQQLGNLASIVRQHIRSFLPPIFDLVVDYWQENMEQVVPLVEEVAASV 356
BLAST of mRNA_H-elongata_contig10714.592.1 vs. uniprot
Match: F0XZH7_AURAN (Serine/threonine-protein kinase TOR n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZH7_AURAN) HSP 1 Score: 72.0 bits (175), Expect = 7.620e-13 Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 2
Query: 2 IFKSLGLQSVDFLASILPTILQVTRRCEAGLRSSLLRQMQVLMRRLKRSMVPYLSDIISLVTHCWTEHMEEVIPLLKEIAGCI 250
IF+SLGL+ V FL +I+P +L V R CE GLR S+L Q+ L ++ + +L I LV W EH+E+V+PLL+EIA +
Sbjct: 864 IFQSLGLRCVPFLGNIVPHLLDVARTCEPGLRESVLLQLAALAAIVRHHLRDWLPRIFELVVDYWAEHLEQVVPLLEEIATSV 946
BLAST of mRNA_H-elongata_contig10714.592.1 vs. uniprot
Match: A0A7S3JTK9_9STRA (Serine/threonine-protein kinase TOR (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JTK9_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 3.480e-9 Identity = 34/83 (40.96%), Postives = 49/83 (59.04%), Query Frame = 2
Query: 2 IFKSLGLQSVDFLASILPTILQVTRRCEAGLRSSLLRQMQVLMRRLKRSMVPYLSDIISLVTHCWTEHMEEVIPLLKEIAGCI 250
IF++L S+ FL I+P +L R E GLR S+L Q+ L ++ S+ +L I LV W EH+E V+PLL+EIA +
Sbjct: 649 IFQALDTNSIPFLNDIVPHLLDAARNGEPGLRESILLQLAALASIVRHSLRDWLPRIFDLVVDYWQEHLENVVPLLEEIATSV 731
BLAST of mRNA_H-elongata_contig10714.592.1 vs. uniprot
Match: A0A7S3ZRC1_9STRA (Non-specific serine/threonine protein kinase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRC1_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.660e-8 Identity = 30/81 (37.04%), Postives = 51/81 (62.96%), Query Frame = 2
Query: 2 IFKSLGLQSVDFLASILPTILQVTRRCEAGLRSSLLRQMQVLMRRLKRSMVPYLSDIISLVTHCWTEHMEEVIPLLKEIAG 244
+ K+LG + V FL +++P +L V R E GLR S+L+Q+ L + + Y+ I+ LV W +H+E+V+PLL+++A
Sbjct: 1209 VVKALGHRCVPFLGALVPHLLDVARDGEPGLRESVLQQLASLASTARYHLRDYVPRILDLVVEYWAQHLEQVVPLLEQVAS 1289
BLAST of mRNA_H-elongata_contig10714.592.1 vs. uniprot
Match: A0A6G0W5V6_9STRA (FAT domain-containing protein (Fragment) n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W5V6_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 6.920e-7 Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 2
Query: 2 IFKSLGLQSVDFLASILPTILQVTRRCEAGLRSSLLRQMQVLMRRLKRSMVPYLSDIISLVTHCWTEHMEEVIPLLKEIA 241
IFKSL LQ V FL SI+P L V + E LR SL Q+ VL ++ + P+ +I++L+ W H+ ++ L++++A
Sbjct: 8 IFKSLALQCVPFLPSIMPPFLHVLDKGEPRLRHSLFVQLTVLTSIVQSHLSPFFQEIVALILRHWRAHLSPILRLIEKLA 87
BLAST of mRNA_H-elongata_contig10714.592.1 vs. uniprot
Match: A0A6G0WIT3_9STRA (Serine/threonine-protein kinase TOR n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WIT3_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 7.050e-7 Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 2
Query: 2 IFKSLGLQSVDFLASILPTILQVTRRCEAGLRSSLLRQMQVLMRRLKRSMVPYLSDIISLVTHCWTEHMEEVIPLLKEIA 241
IFKSL LQ V FL SI+P L V + E LR SL Q+ VL ++ + P+ +I++L+ W H+ ++ L++++A
Sbjct: 881 IFKSLALQCVPFLPSIMPPFLHVLDKGEPRLRHSLFVQLTVLTSIVQSHLSPFFQEIVALILRHWRAHLSPILRLIEKLA 960
BLAST of mRNA_H-elongata_contig10714.592.1 vs. uniprot
Match: A0A6G0WIQ7_9STRA (Serine/threonine-protein kinase TOR n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WIQ7_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 7.050e-7 Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 2
Query: 2 IFKSLGLQSVDFLASILPTILQVTRRCEAGLRSSLLRQMQVLMRRLKRSMVPYLSDIISLVTHCWTEHMEEVIPLLKEIA 241
IFKSL LQ V FL SI+P L V + E LR SL Q+ VL ++ + P+ +I++L+ W H+ ++ L++++A
Sbjct: 911 IFKSLALQCVPFLPSIMPPFLHVLDKGEPRLRHSLFVQLTVLTSIVQSHLSPFFQEIVALILRHWRAHLSPILRLIEKLA 990
BLAST of mRNA_H-elongata_contig10714.592.1 vs. uniprot
Match: A0A3R6YXP0_9STRA (Serine/threonine-protein kinase TOR (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YXP0_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 1.600e-5 Identity = 28/80 (35.00%), Postives = 46/80 (57.50%), Query Frame = 2
Query: 2 IFKSLGLQSVDFLASILPTILQVTRRCEAGLRSSLLRQMQVLMRRLKRSMVPYLSDIISLVTHCWTEHMEEVIPLLKEIA 241
IFKSL LQ V FL SI+P L V + E LR SL Q+ L ++ + P+ +++L+ W H+ ++ L++++A
Sbjct: 892 IFKSLSLQCVPFLPSIVPPFLHVLDKGEPRLRHSLFLQLTALTSIVQHHLSPFFPAMVTLILRHWRAHLSPILQLIEKLA 971
BLAST of mRNA_H-elongata_contig10714.592.1 vs. uniprot
Match: A0A024TJB8_9STRA (Serine/threonine-protein kinase TOR n=11 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJB8_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 1.610e-5 Identity = 28/80 (35.00%), Postives = 46/80 (57.50%), Query Frame = 2
Query: 2 IFKSLGLQSVDFLASILPTILQVTRRCEAGLRSSLLRQMQVLMRRLKRSMVPYLSDIISLVTHCWTEHMEEVIPLLKEIA 241
IFKSL LQ V FL SI+P L V + E LR SL Q+ L ++ + P+ +++L+ W H+ ++ L++++A
Sbjct: 985 IFKSLSLQCVPFLPSIVPPFLHVLDKGEPRLRHSLFLQLTALTSIVQHHLSPFFPAMVTLILRHWRAHLSPILQLIEKLA 1064 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10714.592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10714.592.1 >prot_H-elongata_contig10714.592.1 ID=prot_H-elongata_contig10714.592.1|Name=mRNA_H-elongata_contig10714.592.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp DFQEPRASERGLFSLHPPDHPSSNKAVRGGIAVELAPPDAGADAQVEAKHback to top mRNA from alignment at H-elongata_contig10714:3720..4810- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10714.592.1 ID=mRNA_H-elongata_contig10714.592.1|Name=mRNA_H-elongata_contig10714.592.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1091bp|location=Sequence derived from alignment at H-elongata_contig10714:3720..4810- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10714:3720..4810- >mRNA_H-elongata_contig10714.592.1 ID=mRNA_H-elongata_contig10714.592.1|Name=mRNA_H-elongata_contig10714.592.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=504bp|location=Sequence derived from alignment at H-elongata_contig10714:3720..4810- (Himanthalia elongata Himel1 dioecious)back to top |