mRNA_H-elongata_contig10654.538.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10654.538.1
Unique NamemRNA_H-elongata_contig10654.538.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig10654.538.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 1.930e-86
Identity = 138/303 (45.54%), Postives = 194/303 (64.03%), Query Frame = 1
Query:   25 MNKSGGQTIKFMLLKWIEEQAITVGLYDSSEWKNGTAYARKFLSYDFDLTWGAYAEGLRPHG---VRPHCKWFTVFRHPVSRLVSAFYFCQNRTADPLCAANVM--RADEIDIFTFAEHWANFGLRQFANAFVSPDIVMRSRM-----GQRCPH-----CPGWCVFLLKSYLEEMYEKSNENVES----DNGPNREPDAGMRHLLEPVELLLRDNYAAVGILEQYDSTLHLFNASLGMPGVDWPSAFQGLGVKNKDRLFDRDIQQATKKIMTDSRIKEFLQLDLLLYEFAVSVHKAQVALHGL 876
            MNK+GG T+K+ML  W + Q +TVGLYDS +W  G  +A+ FL  +  L WGAY EGLRP G   +R  CKWFT+FRHP+ RLVSA+++C+ +  D LCA   +   AD+ D++ FAEHW +FGLRQFA AFV P+ ++ +++     G   P+     CPGW  + LK YL++  ++  +   S     +G      A + HLL+PV+ LL + YAAVG+LEQ++++L LFN +LGMPG DWP  F  +G KN D  F  +  +   +  TD R++ +L LDLLLY++AVSVH  QV  +GL
Sbjct:    1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDFLGDENSLMWGAYTEGLRPFGGLGLR-ECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGW--YELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300          
BLAST of mRNA_H-elongata_contig10654.538.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 1.710e-69
Identity = 114/292 (39.04%), Postives = 176/292 (60.27%), Query Frame = 1
Query:    7 CWILNHMNKSGGQTIKFMLLKWIEEQAITVGLYDSSEWKNGTAYARKFLSYDFDLTWGAYAEGLRPHGVRPHCKWFTVFRHPVSRLVSAFYFCQNRTADPLCAANVMRADEIDIFTFAEHWANFGLRQFANAFVSPDIVMRSRM-GQRCPHCPGWCVFLLKSYLEEMYEKSNENVESDNGPNREPDAGMRHLLEPVELLLRDNYAAVGILEQYDSTLHLFNASLGMPGVDWPSAFQGLGVKNKD-RLFDRDIQQATKKIMTDSRIKEFLQLDLLLYEFAVSVHKAQVALHGL 876
            CW+ +HMNKSGG T++ M++ ++ E+ ++  L+D  EW +G +YA  F+  +   T+G Y EGLR +  R  CKWFTVFRHPVSR+VSA+++CQ    D LCAA V+ A ++D+ TFAEHW N+GLRQFA A +  + V  + +  + C    G     + ++  + +     + +   GP + P++G+   L   +  L   YAAVGI+E++D+++ LFN  L +   DW   FQ  G KN     F+   + A K       +K+F+ LD+LLY+ A+SVH++QVA  G+
Sbjct:   52 CWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAETFVKENAVFTYGGYTEGLRMYDDRD-CKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQ-PESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341          
BLAST of mRNA_H-elongata_contig10654.538.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 1.190e-58
Identity = 123/316 (38.92%), Postives = 165/316 (52.22%), Query Frame = 1
Query:    7 CWILNHMNKSGGQTIKFMLLKWIEEQAITVGLYDSSEWKNGTAYARKFL-SYDFDLTW----GAYAEGLR------PHGVRPHCKWFTVFRHPVSRLVSAFYFCQNRTADPLCAANVMRADEIDIFTFAEHWANFGLRQFANAFVSPDIVMR--------SRMG---QRCPHCPGWCVFLLKSYLEEMYEKSNENVESDNGPNREPDAGMRHLLEPVELLLRDNYAAVGILEQYDSTLHLFNASLGMPGVDWPSAFQGLGVKNKDRLFDRDIQQATKKIMTDSRIKEFLQLDLLLYEFAVSV-----HKAQVALHG 873
            CWI NH+ K+GG T+K +L      ++ T   YDS +WK G  YA     S      W    G Y E LR      P   R  C+WFTVFRHPVSRLVSA+Y+C+   +D LCA+  + +  +D+ TFA HW NF LRQFA  FVS D V            MG   ++    PGW  ++LK +L +        V  D  P       + ++  PV  LLRDNYA VGILE +++TL LF+++L MPG+ W   F+  G  N D  F  + Q   ++ ++D  I + L LDL LY  AV +     H   +A HG
Sbjct:   88 CWIFNHLQKAGGTTVKRLLFDSWGSESTT---YDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGW--YMLKLFLNDR-----SGVADDTSPEG---TRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGIAQHG 390          
BLAST of mRNA_H-elongata_contig10654.538.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 1.630e-58
Identity = 113/293 (38.57%), Postives = 167/293 (57.00%), Query Frame = 1
Query:    7 CWILNHMNKSGGQTIKFMLLKWIEEQAITVGLYDSSEWKNGTAYARKFLSYDFDLTWGAYAEGLRPHGVRPHCKWFTVFRHPVSRLVSAFYFCQNRTADPLCAANVMRADEIDIFTFAEHWANFGLRQFANAFVSPDIVMRSRMGQRCPHCPGWCVFLLKSYLEEMYEKSNENVESDNGPNRE--PDAGMRHLLEPVELLLRDNYAAVGILEQYDSTLHLFNASLGMPGVDWPSAFQGLGVKN-KDRLFDRDIQQATKKIMTDSRIKEFLQLDLLLYEFAVSVHKAQVALHGL 876
            CW+   MNK+GG +I+ M+  +      TVG +  +++  G    ++ L     L WGAY EGLRP+     CKWFT+ RHP++RLVSAF +C    +D LCA  + + ++ DI+ FAEHW N G+ QFA AF   + ++ + +       P W  +  K Y E     S +   S N   ++   +  M  +L+PVE LLR  YAAVGILEQ+++++ LF+ +L +PG +W S       +N  D     D+  A+   MTD  +K+ L LD+LLYE A SVHKAQ++ +GL
Sbjct:   37 CWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEVKS-----PPW--YKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSKAKNDLLVAS---MTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319          
BLAST of mRNA_H-elongata_contig10654.538.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 8.970e-56
Identity = 111/302 (36.75%), Postives = 166/302 (54.97%), Query Frame = 1
Query:    7 CWILNHMNKSGGQTIKFMLLKWIEEQAITVGLYDSSEWKNGTAYARKF-----LSYDFDLTWGAYAEGLR-PHGVRPHCKWFTVFRHPVSRLVSAFYFCQNRTADPLCAANVMRADEIDIFTFAEHWANFGLRQFANAFVSPDIVMRSRMGQRCPHCPGWCVFLLKSYLEEMYEKSN------ENVESDNGPNREPDAGMRHLLEPVELLLRDNYAAVGILEQYDSTLHLFNASLGMPGVDWPSAFQGLGVKNKDRLFDRDIQQATKKIMTDSRIKEFLQLDLLLYEFAVSVHKAQVALHGL 876
            CW+  H+ K GG T+K +L    +       +YDS  WK G  ++ KF     L   +++  G Y E LR    V   C++FT+FRHP++R+VSA+++C++ + D  CA+ VM+A ++D+ TFA+HW NF LRQFA  FV  D V                 + LK YLE   ++        E + +       PDA +  LL+P   L+RD Y AVGILEQ+++TL LF+ +L MP ++W   F   G  + D +  +   +  ++  TDS +K++++LDLLLYE AV V   Q   HGL
Sbjct:  177 CWVFMHLQKCGGSTVKDLLE---DRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE---------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460          
BLAST of mRNA_H-elongata_contig10654.538.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 2.880e-53
Identity = 118/313 (37.70%), Postives = 170/313 (54.31%), Query Frame = 1
Query:    7 CWILNHMNKSGGQTIKFMLLKWIEEQAITVGLYDSSEWKNGTAYARKF-LSYDFDLTW----GAYAEGLR-PHGVRPHCKWFTVFRHPVSRLVSAFYFCQNRTADPLCAANVMRADEIDIFTFAEHWANFGLRQFANAFVSPDIV---MRSRMGQRC-----PHCPGWCVFLLKSYLEEMYEKSN---------ENVESDNGPNREPDAGMRHLLEPVELLLRDNYAAVGILEQYDSTLHLFNASLGMPGVDWPSAFQGLGVKNKDRLFDRDIQQATKKIMTDSRIKEFLQLDLLLYEFAVSVHKAQVALHGL 876
            CW+  H+ K GG T+K+ML +          +YDS++WK G   +  F +      TW    G Y E LR    V   C++FT+FRHP++R+VSA+++C++   D  CA+ V+ A ++D+ TFA+HW NF +RQFA  FV  D V   +R+   Q           GW  + LK YLE   EK +           VE D     E  A +  LL+P   L+R  Y AVGILEQ+++TLHLF+ +L +PG+ W + F   G +  D    R   +  K+  TDS +K++++LDLLLYE AV V   Q   +GL
Sbjct:  156 CWVFMHLQKCGGSTVKYMLRR---SYGSRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGW--YQLKMYLERP-EKGDWGVPGQSEAMTVEHDAAATLE--APLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460          
BLAST of mRNA_H-elongata_contig10654.538.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 8.280e-53
Identity = 107/293 (36.52%), Postives = 162/293 (55.29%), Query Frame = 1
Query:    7 CWILNHMNKSGGQTIKFMLLKWIEEQAITVGLYDSSEWKNGTAYARKFLSYDFDLTWGAYAEGLRPHGVRPHCKWFTVFRHPVSRLVSAFYFCQNRTADPLCAANVMRADEIDIFTFAEHWANFGLRQFANAFVSPDIVMRSRMGQRCPHCPGWCVFLLKSYLE-EMYEKSNENVESDNGPNRE-PDAGMRHLLEPVELLLRDNYAAVGILEQYDSTLHLFNASLGMPGVDWPSAFQGLGV-KNKDRLFDRDIQQATKKIMTDSRIKEFLQLDLLLYEFAVSVHKAQVALHGL 876
            CW+  H NK+GG T+K  L  + E +  TV L  S  +  G    +  L+    L  G YAEGLR    +  CKWFT+ RHP++RL+SAFY+C     D LCAAN+ + ++ DI+ FA+HW N+ L QFA   V    +    +       P W  F  K Y E  +    N +  ++   + E     +  +L+PVE LLR NYAAVGILE +  ++ LF+ +L +PG +W  A   L   K+++++ ++    A    MTD  +++++ LDLLLYE+A S+H+ Q+  + L
Sbjct:   37 CWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGIQDLLNDKPVLIAGGYAEGLRTSAFQG-CKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEVD-----APAW--FKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIVEKKAMLAAA--MTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319          
BLAST of mRNA_H-elongata_contig10654.538.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.390e-42
Identity = 99/294 (33.67%), Postives = 154/294 (52.38%), Query Frame = 1
Query:    7 CWILNHMNKSGGQTIKFMLL-KWIEEQAITVGLYDSSEWKNGTAYARKFLSYDFDLTWGAYAEGLRPHGVRPHCKWFTVFRHPVSRLVSAFYFCQNRTADPLCAANVMRADEIDIFTFAEHWANFGLRQFANAFVSPDIVMRSRMGQRCPHCPGWCVFLLKSYLEEMYEKSNENVESDNGPNREPDAGMRHLLEPVELLLRDNYAAVGILEQYDSTLHLFNASLGMPGVDWPSAFQGLGVKNK---DRLFDRDIQQATKKIMTDSRIKEFLQLDLLLYEFAVSVHKAQVALHGL 876
            CWI  HM+KSG    + +   +W +++ +    +D+ +W+ G  +A   ++  + L  G   E LR H  R  CKW T+FRHP++RL+SA++ C     DP+C       +   +  FAE W NF +RQFA   VSP  V +    QR         +L+K YL       +E +ES              +LEPV+ LL   YAAVGI ++ ++T+ LF+ +L M G+DW S++  LG+  +   D  +D    +  ++ + + RI   L+LD+ LYE A+ V K QVA  G+
Sbjct:  273 CWIFMHMDKSGASGARRVATERWRKDELV----FDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKERS-CKWLTIFRHPIARLLSAYHHCLEAPKDPVCPPT----ESTGLVVFAELWGNFAMRQFALESVSPSAV-KEWAAQRQARTGTSMWYLVKEYLARGGIAEDEVLES--------------MLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGI 542          
BLAST of mRNA_H-elongata_contig10654.538.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 2.490e-39
Identity = 96/288 (33.33%), Postives = 148/288 (51.39%), Query Frame = 1
Query:   25 MNKSGGQTIKFMLLK-WIEEQAITVGLYDSSEWKNGTAYARKFLSYDFDLTWGAYAEGLRPHGVRPHCKWFTVFRHPVSRLVSAFYFCQNRTADPLCAANVMRADEIDIFTFAEHWANFGLRQFANAFVSPDIVMRSRMGQRCPHCPGWCVFLLKSYLEEMYEKSNENVESDNGPNREPDAGMRHLLEPVELLLRDNYAAVGILEQYDSTLHLFNASLGMPGVDWPSAFQGLGVKNKDRL---FDRDIQQATKKIMTDSRIKEFLQLDLLLYEFAVSVHKAQVALHGL 876
            M+KSG    + +  + W +++ +    +D+ +W+ G  +A   ++  + L  G   E LR H  R  CKW T+FRHP++RL+SA+  C     DP+C       +   +  FAE W NF +RQFA A VSP  V +    QR         +L+K YL       +E + S               LEPV+ LL   YAAVGI ++  +T+ LF+ +L M G+DW S++  LG+  +D+    +D    +  ++ + + RI   L+LD+ LYE AV V K QVA  G+
Sbjct:    1 MDKSGASGARRVATEQWRKDELV----FDTVQWRRGDGFAADVMASRWKLLHGGCVESLRNHKGRS-CKWITIFRHPIARLLSAYDHCLGAPKDPVCPPT----ESTGLAAFAELWGNFAMRQFALAAVSPSAV-KEWAAQRQARTGTSMWYLVKEYLARGGIAEDEVLGSK--------------LEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 264          
BLAST of mRNA_H-elongata_contig10654.538.1 vs. uniprot
Match: A0A6H5JT23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT23_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 5.450e-15
Identity = 89/306 (29.08%), Postives = 125/306 (40.85%), Query Frame = 1
Query:    7 CWILNHMNKSGGQTIKFMLLKWIEEQAITVGLYDSSEWKNGTAYARKFLSYDFDLTWGAYAEGLRPHG----VRPHCKWFTVFRHPVSRLVSAFYFCQNR-------------TADPLCAANVMRADEIDIFTFAE-HWANFGLRQFANAFVSPDIVMRSRMGQRCPH---CPGWCVFLLKSYLEEMYEKSNENVESDNGPNREPDAGMRHLLEPVELLLRDNYAAVGILEQYDSTLHLFNASLGMPGVDWPSAFQG-LGVKNKDRLFDRDIQQATKKIMTDSRIKEFLQLDLLLYEFAVSVHKAQ 858
            C + +HM KSGG TIK  L   I  +A       S     G        +++       YAE +R  G    VR  C++FT+ RHPV RLVSAF++C                  DPL A +        +  FA+ HW N   +Q                G  CPH   C                    E  E +  P  +   G+  +L+ VE +L   Y AVGI+E +D ++ LFNA +  P  DW    +   G+ ++  L D  +Q A    +    I   +  DLLLY FA+S+ K Q
Sbjct:   41 CTVFHHMVKSGGSTIKHNLH--ISSRAAGGPRPGSCVAGGGKRINSCKEAFNSSAVIMGYAELMRQDGPLEAVRRDCEYFTLLRHPVDRLVSAFFYCPTDHDLQLRPPKWCGYADDPLPATD-------RLLEFAQQHWKNMAYKQMT-------------FGMYCPHGLIC--------------------EATEVETAPGLDEPHGL-DVLQKVEDIL-SGYTAVGIMEHWDLSMQLFNARVRSPVRDWNMTVRSNAGLPSE--LRDEVLQWAHDSPV----IHRLMATDLLLYSFALSIFKRQ 296          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10654.538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FS84_ECTSI1.930e-8645.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY77_9PHAE1.710e-6939.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G715_ECTSI1.190e-5838.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQY7_9PHAE1.630e-5838.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G716_ECTSI8.970e-5636.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWQ3_ECTSI2.880e-5337.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNJ0_9PHAE8.280e-5336.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM0_9PHAE1.390e-4233.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU75_ECTSI2.490e-3933.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JT23_9PHAE5.450e-1529.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10654contigH-elongata_contig10654:4058..5386 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score186.4
Seed ortholog evalue1.8e-44
Seed eggNOG ortholog2880.D7G715
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size879
Cds size855
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10654.538.1prot_H-elongata_contig10654.538.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10654 4082..5386 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929596.144219-UTR-H-elongata_contig10654:4057..40811622929596.144219-UTR-H-elongata_contig10654:4057..4081Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10654 4058..4081 +
1691679084.2970684-UTR-H-elongata_contig10654:4057..40811691679084.2970684-UTR-H-elongata_contig10654:4057..4081Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10654 4058..4081 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929596.1595695-CDS-H-elongata_contig10654:4081..45301622929596.1595695-CDS-H-elongata_contig10654:4081..4530Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10654 4082..4530 +
1691679084.3086357-CDS-H-elongata_contig10654:4081..45301691679084.3086357-CDS-H-elongata_contig10654:4081..4530Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10654 4082..4530 +
1622929596.1856518-CDS-H-elongata_contig10654:4980..53861622929596.1856518-CDS-H-elongata_contig10654:4980..5386Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10654 4981..5386 +
1691679084.3226578-CDS-H-elongata_contig10654:4980..53861691679084.3226578-CDS-H-elongata_contig10654:4980..5386Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10654 4981..5386 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10654.538.1

>prot_H-elongata_contig10654.538.1 ID=prot_H-elongata_contig10654.538.1|Name=mRNA_H-elongata_contig10654.538.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=285bp
MNKSGGQTIKFMLLKWIEEQAITVGLYDSSEWKNGTAYARKFLSYDFDLT
WGAYAEGLRPHGVRPHCKWFTVFRHPVSRLVSAFYFCQNRTADPLCAANV
MRADEIDIFTFAEHWANFGLRQFANAFVSPDIVMRSRMGQRCPHCPGWCV
FLLKSYLEEMYEKSNENVESDNGPNREPDAGMRHLLEPVELLLRDNYAAV
GILEQYDSTLHLFNASLGMPGVDWPSAFQGLGVKNKDRLFDRDIQQATKK
IMTDSRIKEFLQLDLLLYEFAVSVHKAQVALHGL*
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mRNA from alignment at H-elongata_contig10654:4058..5386+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10654.538.1 ID=mRNA_H-elongata_contig10654.538.1|Name=mRNA_H-elongata_contig10654.538.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1329bp|location=Sequence derived from alignment at H-elongata_contig10654:4058..5386+ (Himanthalia elongata Himel1 dioecious)
AAACCGTGCTGGATCTTGAACCACATGAACAAGTCTGGCGGTCAGACGAT CAAATTCATGCTTCTGAAGTGGATCGAAGAGCAAGCGATTACCGTCGGAC TCTACGACTCGTCCGAATGGAAGAACGGAACAGCGTACGCGCGGAAGTTT CTCAGCTACGACTTCGACCTGACGTGGGGGGCCTACGCAGAGGGTCTGCG GCCGCACGGAGTCCGGCCCCACTGCAAGTGGTTCACGGTTTTCCGCCACC CTGTGAGCCGTCTCGTCTCGGCGTTCTACTTCTGCCAGAACAGGACGGCG GATCCCCTGTGCGCGGCAAACGTGATGCGGGCGGACGAGATTGACATCTT CACGTTTGCGGAGCACTGGGCAAATTTCGGGCTGCGGCAGTTTGCCAACG CCTTTGTCTCGCCCGACATCGTCATGAGGTCGAGAATGGGGCAACGATGT CCTCACTGCCCAGGCTGGTGCGTGTTTTGTTTGCTTGATCTCGCGTTTCG TCTGGTGTGCCCATTCAAAAGAGGAGCCCCGATGTTAGGGCCTCCATCGC ATGTGCTCAGCTGAACAGGTAGCTTGAGTAAAGGGTGCAGCCTATTCACG TAACCCCATAGACCAATTATTTTCCCCACATCCACTATGGGTAGAGTGGG CATGTGCGATACAGTCACAGACAGTATCGGAGGCAATTAGACTTCCGCGT GATGGGCTCCCTCATGATTAGAAGCCTCCGAGGTATTACTGCTCTCCGGT CGGTCATCCATTCGATTCGATTCGATTCGATTCTCACGTAATTCGTTTGC AACCACACTCCGGAGCGCCGGTGATCGTGCGCGCTCATGCCCACGCTATC GTTTAGGTTGGTACCTTTGAGTTTGATTGCTCGCTATGATCGGAACTCTC CCCCGTTTTCCGGACGGAACCAGGTTCTTGCTCAAGTCTTACTTGGAAGA GATGTACGAGAAGAGCAACGAGAACGTCGAGAGCGACAACGGTCCAAACA GAGAGCCCGACGCCGGCATGCGCCATTTGCTGGAACCCGTGGAATTGCTC CTCAGGGATAATTACGCCGCGGTCGGAATCCTGGAGCAATACGACAGCAC GCTTCACCTGTTCAACGCTTCCCTGGGTATGCCCGGCGTCGACTGGCCCT CTGCGTTCCAAGGCCTCGGCGTGAAGAACAAGGACAGACTGTTCGACAGG GACATCCAGCAGGCTACGAAGAAGATCATGACGGACTCGAGGATCAAGGA GTTCCTCCAACTCGACCTCCTGCTCTACGAGTTCGCCGTTTCTGTTCATA AGGCGCAGGTTGCCTTGCACGGCCTATGA
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Coding sequence (CDS) from alignment at H-elongata_contig10654:4058..5386+

>mRNA_H-elongata_contig10654.538.1 ID=mRNA_H-elongata_contig10654.538.1|Name=mRNA_H-elongata_contig10654.538.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1710bp|location=Sequence derived from alignment at H-elongata_contig10654:4058..5386+ (Himanthalia elongata Himel1 dioecious)
ATGAACAAGTCTGGCGGTCAGACGATCAAATTCATGCTTCTGAAGTGGAT
CGAAGAGCAAGCGATTACCGTCGGACTCTACGACTCGTCCGAATGGAAGA
ACGGAACAGCGTACGCGCGGAAGTTTCTCAGCTACGACTTCGACCTGACG
TGGGGGGCCTACGCAGAGGGTCTGCGGCCGCACGGAGTCCGGCCCCACTG
CAAGTGGTTCACGGTTTTCCGCCACCCTGTGAGCCGTCTCGTCTCGGCGT
TCTACTTCTGCCAGAACAGGACGGCGGATCCCCTGTGCGCGGCAAACGTG
ATGCGGGCGGACGAGATTGACATCTTCACGTTTGCGGAGCACTGGGCAAA
TTTCGGGCTGCGGCAGTTTGCCAACGCCTTTGTCTCGCCCGACATCGTCA
TGAGGTCGAGAATGGGGCAACGATGTCCTCACTGCCCAGGCTGGTGCGTA
TGAACAAGTCTGGCGGTCAGACGATCAAATTCATGCTTCTGAAGTGGATC
GAAGAGCAAGCGATTACCGTCGGACTCTACGACTCGTCCGAATGGAAGAA
CGGAACAGCGTACGCGCGGAAGTTTCTCAGCTACGACTTCGACCTGACGT
GGGGGGCCTACGCAGAGGGTCTGCGGCCGCACGGAGTCCGGCCCCACTGC
AAGTGGTTCACGGTTTTCCGCCACCCTGTGAGCCGTCTCGTCTCGGCGTT
CTACTTCTGCCAGAACAGGACGGCGGATCCCCTGTGCGCGGCAAACGTGA
TGCGGGCGGACGAGATTGACATCTTCACGTTTGCGGAGCACTGGGCAAAT
TTCGGGCTGCGGCAGTTTGCCAACGCCTTTGTCTCGCCCGACATCGTCAT
GAGGTCGAGAATGGGGCAACGATGTCCTCACTGCCCAGGCTGGTGCGTGT
TCTTGCTCAAGTCTTACTTGGAAGAGATGTACGAGAAGAGCAACGAGAAC
GTCGAGAGCGACAACGGTCCAAACAGAGAGCCCGACGCCGGCATGCGCCA
TTTGCTGGAACCCGTGGAATTGCTCCTCAGGGATAATTACGCCGCGGTCG
GAATCCTGGAGCAATACGACAGCACGCTTCACCTGTTCAACGCTTCCCTG
GGTATGCCCGGCGTCGACTGGCCCTCTGCGTTCCAAGGCCTCGGCGTGAA
GAACAAGGACAGACTGTTCGACAGGGACATCCAGCAGGCTACGAAGAAGA
TCATGACGGACTCGAGGATCAAGGAGTTCCTCCAACTCGACCTCCTGCTC
TACGAGTTCGCCGTTTCTGTTCATAAGGCGCAGGTTGCCTTGCACGGCCT
ATGAGTTCTTGCTCAAGTCTTACTTGGAAGAGATGTACGAGAAGAGCAAC
GAGAACGTCGAGAGCGACAACGGTCCAAACAGAGAGCCCGACGCCGGCAT
GCGCCATTTGCTGGAACCCGTGGAATTGCTCCTCAGGGATAATTACGCCG
CGGTCGGAATCCTGGAGCAATACGACAGCACGCTTCACCTGTTCAACGCT
TCCCTGGGTATGCCCGGCGTCGACTGGCCCTCTGCGTTCCAAGGCCTCGG
CGTGAAGAACAAGGACAGACTGTTCGACAGGGACATCCAGCAGGCTACGA
AGAAGATCATGACGGACTCGAGGATCAAGGAGTTCCTCCAACTCGACCTC
CTGCTCTACGAGTTCGCCGTTTCTGTTCATAAGGCGCAGGTTGCCTTGCA
CGGCCTATGA
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