mRNA_H-elongata_contig106213.506.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig106213.506.1 vs. uniprot
Match: D7FPC3_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPC3_ECTSI) HSP 1 Score: 108 bits (270), Expect = 2.220e-26 Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 1
Query: 13 EFLCNLEKQYGVSRAYWFLGTFATIALSLFLIGGMTLIVNLVGFSYPALASFKAIDSPDALLSKQWLSYWAIFGAFSSVENSLS 264
+++ +E YG SRA WFLG F+ + + L+ IGG+ LI NL+GF YPA ASFKAIDSPDAL S+Q LSYW IFGAF ++E S S
Sbjct: 29 KYMRQMEANYGGSRASWFLGLFSIVTVILYFIGGLALIANLIGFCYPAFASFKAIDSPDALASQQLLSYWVIFGAFFTLETSFS 112
BLAST of mRNA_H-elongata_contig106213.506.1 vs. uniprot
Match: K3WMA9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMA9_GLOUD) HSP 1 Score: 76.6 bits (187), Expect = 1.260e-15 Identity = 36/85 (42.35%), Postives = 50/85 (58.82%), Query Frame = 1
Query: 1 LPHIEFLCNLEKQYGVSRAYWFLGTFATIALSLFLIGGMTLIVNLVGFSYPALASFKAIDSPDALLSKQWLSYWAIFGAFSSVEN 255
L + + LEKQ GV + Y F + LF++GG +L+VNLVGF YPA SFKAI +P QWL+YW ++ F+ E+
Sbjct: 15 LERYDKIVELEKQTGVDKFYIFCAGAVLSGILLFVVGGASLVVNLVGFLYPAYQSFKAISTPSTEDDTQWLTYWVVYAFFNITES 99
BLAST of mRNA_H-elongata_contig106213.506.1 vs. uniprot
Match: A0A6G0XKE2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKE2_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 2.250e-15 Identity = 37/85 (43.53%), Postives = 50/85 (58.82%), Query Frame = 1
Query: 1 LPHIEFLCNLEKQYGVSRAYWFLGTFATIALSLFLIGGMTLIVNLVGFSYPALASFKAIDSPDALLSKQWLSYWAIFGAFSSVEN 255
L E L LEKQ GV + Y F + LF++GG +LI NLVGF YPA SFKA+++ + QWL+YW ++ AF+ E
Sbjct: 15 LERYEQLKELEKQTGVDKFYIFAAGAVVAGILLFVVGGASLISNLVGFVYPAYMSFKALNTDSSTDDTQWLTYWVVYSAFNLTEQ 99
BLAST of mRNA_H-elongata_contig106213.506.1 vs. uniprot
Match: A0A7S3KX69_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KX69_EUPCR) HSP 1 Score: 74.3 bits (181), Expect = 3.710e-15 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 1 LPHIEFLCNLEKQYGVSRAYWFLGTFATIALSLFLIGGMTLIVNLVGFSYPALASFKAIDSPDALLSKQWLSYWAIFGAFSSVE 252
L I FL +LEK+ GV + Y G + +FL G +L+ NLVGF YPA ASFKAI+S D WL+YW ++ F+ +E
Sbjct: 29 LNKIPFLVDLEKKTGVPKFYMVAGILGATVILVFLNIGASLLTNLVGFLYPAYASFKAIESHDKDDDTMWLTYWVVYAFFNMIE 112
BLAST of mRNA_H-elongata_contig106213.506.1 vs. uniprot
Match: A0A1W0AAL7_9STRA (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1W0AAL7_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 9.970e-15 Identity = 38/85 (44.71%), Postives = 51/85 (60.00%), Query Frame = 1
Query: 1 LPHIEFLCNLEKQYGVSRAYWFLGTFATIALSLFLIGGMTLIVNLVGFSYPALASFKAIDSPDALLSKQWLSYWAIFGAFSSVEN 255
L + L LE Q GV + Y FL + LF+IGG +LI NLVGF YPA SFKA+++ D+ QWL+YW ++ AF+ E
Sbjct: 15 LDRYDKLKELEAQIGVEKFYIFLVGALIAGVLLFVIGGASLISNLVGFIYPAYMSFKALNTNDSNDDTQWLTYWVVYSAFNLTEQ 99
BLAST of mRNA_H-elongata_contig106213.506.1 vs. uniprot
Match: A0A7S2F8X6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8X6_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.750e-14 Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 85 IALSLFLIGGMTLIVNLVGFSYPALASFKAIDSPDALLSKQWLSYWAIFGAFSSVENS 258
+ L L L+G LI+NL+GF+YPAL SFKAIDS D+ QWLSYW I+G+FS +E++
Sbjct: 51 VLLILALLGASRLIINLLGFAYPALQSFKAIDSKDSKTDTQWLSYWIIYGSFSIIEHA 108
BLAST of mRNA_H-elongata_contig106213.506.1 vs. uniprot
Match: UPI0013962499 (receptor expression-enhancing protein 5-like n=1 Tax=Phoca vitulina TaxID=9720 RepID=UPI0013962499) HSP 1 Score: 71.2 bits (173), Expect = 2.340e-13 Identity = 35/80 (43.75%), Postives = 48/80 (60.00%), Query Frame = 1
Query: 13 EFLCNLEKQYGVSRAYWFLGTFATIALSLFLIGGMTLIVNLVGFSYPALASFKAIDSPDALLSKQWLSYWAIFGAFSSVE 252
+ L LE + GV+R LG +AL L G +L+ NL+GF YPA S KAI+SP+ QWL+YW ++G FS+ E
Sbjct: 21 DLLAKLEGRTGVNRREIALGVIGLLALYLVFGYGASLLRNLIGFGYPAYVSIKAIESPNKEDDTQWLTYWVVYGVFSTAE 100
BLAST of mRNA_H-elongata_contig106213.506.1 vs. uniprot
Match: A0A4P9Z057_9FUNG (Protein YOP1 (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z057_9FUNG) HSP 1 Score: 70.1 bits (170), Expect = 2.800e-13 Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 1
Query: 1 LPHIEFLCNLEKQYGVSRAYWFLGTFATIALSLFLIGGMTLIVNLVGFSYPALASFKAIDSPDALLSKQWLSYWAIFGAFSSVEN 255
L I L L++Q GV + Y G + + +F L+ NL+GF YPA ASFKAI++ QWL+YW +FGAF+ VE+
Sbjct: 16 LSKIPQLVQLQEQTGVKKTYLVGGVAGVVFIMIFFNVAGGLLTNLLGFGYPAYASFKAIETASKDDDTQWLTYWTVFGAFNLVES 100
BLAST of mRNA_H-elongata_contig106213.506.1 vs. uniprot
Match: A0A0D2X1Y1_CAPO3 (Receptor accessory protein 5 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X1Y1_CAPO3) HSP 1 Score: 70.5 bits (171), Expect = 3.630e-13 Identity = 38/84 (45.24%), Postives = 49/84 (58.33%), Query Frame = 1
Query: 1 LPHIEFLCNLEKQYGVSRAYWFLGTFATIALSLFLIGGMTLIVNLVGFSYPALASFKAIDSPDALLSKQWLSYWAIFGAFSSVE 252
L F+ L+ Q V +AY +G F I LSL G L+ N+VGF YPA ASFKAI+S + QWL+YW +F FS +E
Sbjct: 16 LNKYPFMIRLQDQTKVPKAYLAIGGFLLILLSLSAGLGAQLVCNIVGFVYPAYASFKAIESTNKDDDTQWLTYWVVFAFFSLLE 99
BLAST of mRNA_H-elongata_contig106213.506.1 vs. uniprot
Match: A0A1Z5K1S1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1S1_FISSO) HSP 1 Score: 67.8 bits (164), Expect = 3.090e-12 Identity = 39/83 (46.99%), Postives = 57/83 (68.67%), Query Frame = 1
Query: 19 LCNLEKQYGVSRAYWFLGTFATIALS-LFLIGGMTLIVNLVGFSYPALASFKAIDSPDALLSKQWLSYWAIFGAFSSVENSLS 264
L +LE++ G + Y+F+ T A +LS L+L+GG+ L+V+L+GF YPA SFK++DS + QWL+YW +F S VEN LS
Sbjct: 33 LQDLEQKTGYHKVYFFV-TGAVASLSALWLLGGVKLLVDLLGFVYPAYMSFKSMDS-GSHDDTQWLTYWVVFSFLSIVENLLS 113 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106213.506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig106213.506.1 >prot_H-elongata_contig106213.506.1 ID=prot_H-elongata_contig106213.506.1|Name=mRNA_H-elongata_contig106213.506.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp LPHIEFLCNLEKQYGVSRAYWFLGTFATIALSLFLIGGMTLIVNLVGFSYback to top mRNA from alignment at H-elongata_contig106213:1035..2142- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig106213.506.1 ID=mRNA_H-elongata_contig106213.506.1|Name=mRNA_H-elongata_contig106213.506.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1108bp|location=Sequence derived from alignment at H-elongata_contig106213:1035..2142- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig106213:1035..2142- >mRNA_H-elongata_contig106213.506.1 ID=mRNA_H-elongata_contig106213.506.1|Name=mRNA_H-elongata_contig106213.506.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=534bp|location=Sequence derived from alignment at H-elongata_contig106213:1035..2142- (Himanthalia elongata Himel1 dioecious)back to top |