mRNA_H-elongata_contig106151.496.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig106151.496.1 vs. uniprot
Match: UPI0003F0D16E (zinc finger protein 862-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0D16E) HSP 1 Score: 77.4 bits (189), Expect = 1.190e-13 Identity = 52/152 (34.21%), Postives = 80/152 (52.63%), Query Frame = 1
Query: 7 LIQLEERFAKVDIFENCAVFDPQRFSTKENDLSEYGVDDIKMLEEHYGKKHGSVPQCVDPDELAREWQYAKNIMIDVRRNAAISTRRVWRGVKSSNGGGQFPNLYKLVKIYIIQPHSCIECERGFSAQSRLKYKARNALSPVHLEMLMRLSL 462
++ L ERF V + + ++FDP S E D S G D + ++H + +E+AREW+ KN+M+D + ++ T+ + + VK F NLYKL I +I P S +CERGFSA SR+K RN + L L+ ++L
Sbjct: 574 IVNLRERFPDVHLLQAFSIFDP---SLLEKDDS--GRLDDTLQQQHLETLSTHYSDILSSEEMAREWEMMKNLMVDDQHSSFTCTQMMNKVVKQYKD--VFVNLYKLAVIGLIVPMSTADCERGFSALSRVKTTLRNRMCEKTLSNLLFITL 718
BLAST of mRNA_H-elongata_contig106151.496.1 vs. uniprot
Match: A0A2Z6R8B9_9GLOM (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6R8B9_9GLOM) HSP 1 Score: 74.7 bits (182), Expect = 9.150e-13 Identity = 49/155 (31.61%), Postives = 81/155 (52.26%), Query Frame = 1
Query: 1 KALIQ-LEERFAKVDIFENCAVFDPQRFSTKENDLSEYGVDDIKMLEEHYG-KKHGS----VPQCVDPDELAREWQYAKNIMIDVRRNAAIST-RRVWRGVKSSNGGGQFPNLYKLVKIYIIQPHSCIECERGFSAQSRLKYKARNALSPVHLEM 444
KAL++ L+ F +++++ + DP+ +E+ LS YG++++K+L EH+G +KH S V ++ E +EWQ K+IM +R I +W +FPN+ LV I ++ P S ER FS K + RN L+ L+M
Sbjct: 268 KALVRNLQACFPYNELYDSMKILDPKELPLQESALSSYGIEELKLLCEHFGNQKHKSNGTPVQPLINSSECKKEWQMVKHIMKSIRNYDIIEGWHHIWSTCPQFKN--KFPNVNILVNIVLLVPLSNANVERVFSQHKLTKTRLRNKLNVKTLDM 420
BLAST of mRNA_H-elongata_contig106151.496.1 vs. uniprot
Match: A0A8H3R5N1_9GLOM (WD repeat protein n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3R5N1_9GLOM) HSP 1 Score: 74.7 bits (182), Expect = 1.040e-12 Identity = 49/155 (31.61%), Postives = 81/155 (52.26%), Query Frame = 1
Query: 1 KALIQ-LEERFAKVDIFENCAVFDPQRFSTKENDLSEYGVDDIKMLEEHYG-KKHGS----VPQCVDPDELAREWQYAKNIMIDVRRNAAIST-RRVWRGVKSSNGGGQFPNLYKLVKIYIIQPHSCIECERGFSAQSRLKYKARNALSPVHLEM 444
KAL++ L+ F +++++ + DP+ +E+ LS YG++++K+L EH+G +KH S V ++ E +EWQ K+IM +R I +W +FPN+ LV I ++ P S ER FS K + RN L+ L+M
Sbjct: 268 KALVRNLQACFPYNELYDSMKILDPKELPLQESALSSYGIEELKLLCEHFGNQKHKSNGTPVQPLINSSECKKEWQMVKHIMKSIRNYDIIEGWHHIWSTCPQFKN--KFPNVNILVNIVLLVPLSNANVERVFSQHKLTKTRLRNKLNVKTLDM 420
BLAST of mRNA_H-elongata_contig106151.496.1 vs. uniprot
Match: A0A2N0QRW7_9GLOM (DUF4371 domain-containing protein n=3 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2N0QRW7_9GLOM) HSP 1 Score: 70.9 bits (172), Expect = 2.040e-11 Identity = 45/135 (33.33%), Postives = 73/135 (54.07%), Query Frame = 1
Query: 1 KALIQ-LEERFAKVDIFENCAVFDPQRFSTKENDLSEYGVDDIKMLEEHYG-KKHGS----VPQCVDPDELAREWQYAKNIMIDVRRNAAISTRRVWRGVKSSNGG--GQFPNLYKLVKIYIIQPHSCIECERGF 381
KAL+ L+ RF D++++ + DP+ +E+ LS YG++++K++ EH+G +KH S V ++ E +EWQ K+IM +R I W + S+ QFPN+ LV I ++ P S ER F
Sbjct: 330 KALVHSLQARFPCNDLYDSMKILDPKELPLQESALSSYGIEELKLIFEHFGNQKHKSNGIPVQPLINSSECKKEWQMVKHIMKSIRNYDIIEG---WHHIWSTRPQFKNQFPNVNILVNIVLLVPLSNANVERVF 461
BLAST of mRNA_H-elongata_contig106151.496.1 vs. uniprot
Match: U9SIY2_RHIID (Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=U9SIY2_RHIID) HSP 1 Score: 63.2 bits (152), Expect = 6.170e-9 Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 1
Query: 1 KALIQ-LEERFAKVDIFENCAVFDPQRFSTKENDLSEYGVDDIKMLEEHYG-KKHGS----VPQCVDPDELAREWQYAKNIMIDVRRNAAI--STRRVWRGVKSSNGGGQFPNLYKLVKIYIIQPHSCIECERGFS 384
KAL+ L+ RF D++++ + DP+ +E+ LS YG++++K++ EH+G +KH S V ++ E +EWQ K M +R I +W S QFPN+ LV I ++ P S ER ++
Sbjct: 115 KALVHSLQARFPCNDLYDSMKILDPKELPLQESALSSYGIEELKLICEHFGNQKHKSNGIPVQPLINSSECKKEWQMVK-YMKSIRNYDIIIEGWHHIWS--TRSQFKNQFPNVNILVNIVLLVPLSNANVERVYA 247
BLAST of mRNA_H-elongata_contig106151.496.1 vs. uniprot
Match: A0A817PME5_9BILA (Hypothetical protein n=4 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817PME5_9BILA) HSP 1 Score: 63.5 bits (153), Expect = 8.200e-9 Identity = 48/161 (29.81%), Postives = 86/161 (53.42%), Query Frame = 1
Query: 1 KALIQLEERFAKVDIFENCAV-FDPQRFSTKENDLS--EYGVDDIKMLEEHYGKKHGSVPQCVDPDELAREWQYAKNIMIDVRRNAA--ISTRRVWRGV----KSSNGG--GQFPNLYKLVKIYIIQPHSCIECERGFSAQSRLKYKARNALSPVHLEMLM 450
+ L +L+ RF + E+ ++ FD Q +N+L EYG + L KK+ ++P D + + EW+ K I+ D +N + +S ++ W+ S+N ++ ++ L+ +Y+I P + +ECERGFSA SR++ R+ LS L++LM
Sbjct: 722 RLLQELDRRFKPSIVQEHLSMLFDVQHLIKNKNELDSIEYGRGSLDTLR----KKYKNLPDF-DYNLVRNEWESFKPILFDYIQNISYEVSEQQFWKNFITFKLSTNNSFIDEYKDILILLNVYLIYPTNSVECERGFSAMSRIQSIGRSRLSISTLQVLM 877
BLAST of mRNA_H-elongata_contig106151.496.1 vs. uniprot
Match: UPI001C17B8B0 (Hypothetical protein n=3 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C17B8B0) HSP 1 Score: 61.6 bits (148), Expect = 3.530e-8 Identity = 39/120 (32.50%), Postives = 65/120 (54.17%), Query Frame = 1
Query: 1 KALIQ-LEERFAKVDIFENCAVFDPQRFSTKENDLSEYGVDDIKMLEEHYG-KKHGS----VPQCVDPDELAREWQYAKNIMIDVRRNAAISTRRVWRGVKSSNGGGQFPNLYKLVKIYI 342
KAL+ L+ RF D++++ + DP+ +E+ LS YG++++K++ EH+G +KH S V ++ E +EWQ K+IM +R I W + S+ QF N + V I I
Sbjct: 417 KALVHSLQARFPCNDLYDSMKILDPKELPLQESALSSYGIEELKLIFEHFGNQKHKSNGIPVQPLINSSECKKEWQMVKHIMKSIRNYDIIEG---WHHIWSTRP--QFKNQFPNVNILI 531
BLAST of mRNA_H-elongata_contig106151.496.1 vs. uniprot
Match: UPI001C16239B (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C16239B) HSP 1 Score: 60.1 bits (144), Expect = 6.050e-8 Identity = 32/86 (37.21%), Postives = 54/86 (62.79%), Query Frame = 1
Query: 1 KALIQ-LEERFAKVDIFENCAVFDPQRFSTKENDLSEYGVDDIKMLEEHYG-KKHGSVPQCVDP----DELAREWQYAKNIMIDVR 240
KAL+ L+ RF+ D++++ + DP+ +E+ LS YG++++K+L EH+G +KH S + V P E +EWQ K+IM +R
Sbjct: 132 KALVHSLQARFSHNDLYDSMKILDPKELPLQESALSSYGIEELKLLCEHFGNQKHKSNGKPVQPLINSSECKKEWQMVKHIMKSIR 217
BLAST of mRNA_H-elongata_contig106151.496.1 vs. uniprot
Match: UPI0007AD13DB (zinc finger protein 862-like n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=UPI0007AD13DB) HSP 1 Score: 55.8 bits (133), Expect = 1.700e-6 Identity = 45/142 (31.69%), Postives = 72/142 (50.70%), Query Frame = 1
Query: 43 IFENCAVFDPQRFSTKENDLSEYGVDDIKMLEEHYGKKHGSVPQCVDPDELAREWQYAKNIMIDVRRNAAISTRR-VWRGVKSSNGGGQ-FPNLYKLVKIYIIQPHSCIECERGFSAQSRLKYKARNALSPVHLEMLMRLSL 462
I ++ V +P + ++ +L G D I L +H+ K + + EWQ K I VR+N T +W + + + Q + N+ +LV+I ++ P S +CERGFSAQ+R+K R+ L E LMR+SL
Sbjct: 46 ILDSFRVLNPDTWPEEQANLLTSGDDSIADLVKHFEKPLTEAGCKIAT--IQDEWQGLK---ILVRQNFKDKTYSGLWEMLMTKDPYKQDYKNILELVQIMLVLPISAAQCERGFSAQNRIKNSTRSCLGVSTTEDLMRISL 182
BLAST of mRNA_H-elongata_contig106151.496.1 vs. uniprot
Match: UPI001C09BFD5 (zinc finger protein 862-like isoform X1 n=3 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C09BFD5) HSP 1 Score: 56.2 bits (134), Expect = 2.510e-6 Identity = 38/126 (30.16%), Postives = 64/126 (50.79%), Query Frame = 1
Query: 52 NC-AVFDPQRFSTKENDLSEYGVDDIKMLEEHYGKKHGSVPQCVDPDELAREWQYAKNIMIDVRRNAAISTRRVWRGVKSSNG-GGQFPNLYKLVKIYIIQPHSCIECERGFSAQSRLKYKARNAL 423
NC +F+ + ++L YG D ++ L EH+ S ++ + EWQ K ++ ++ S R +W+ + + + NL LV+I +I P S +CERGFSAQ R+K R++L
Sbjct: 300 NCFTIFNHDTWPENSDELLNYGSDKVEALVEHFSDVLTSFGCQLEA--IQEEWQSVKALISHTFQDK--SYRSLWQMLLTKEPYKTDYKNLLHLVEILLILPISAAQCERGFSAQKRIKSSLRSSL 421 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106151.496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig106151.496.1 >prot_H-elongata_contig106151.496.1 ID=prot_H-elongata_contig106151.496.1|Name=mRNA_H-elongata_contig106151.496.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp KALIQLEERFAKVDIFENCAVFDPQRFSTKENDLSEYGVDDIKMLEEHYGback to top mRNA from alignment at H-elongata_contig106151:144..734- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig106151.496.1 ID=mRNA_H-elongata_contig106151.496.1|Name=mRNA_H-elongata_contig106151.496.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=591bp|location=Sequence derived from alignment at H-elongata_contig106151:144..734- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig106151:144..734- >mRNA_H-elongata_contig106151.496.1 ID=mRNA_H-elongata_contig106151.496.1|Name=mRNA_H-elongata_contig106151.496.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=924bp|location=Sequence derived from alignment at H-elongata_contig106151:144..734- (Himanthalia elongata Himel1 dioecious)back to top |