mRNA_H-elongata_contig10551.456.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10551.456.1 vs. uniprot
Match: B1N8E9_9PHAE (Glutathione S-transferase 4 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E9_9PHAE) HSP 1 Score: 112 bits (279), Expect = 1.040e-27 Identity = 58/127 (45.67%), Postives = 86/127 (67.72%), Query Frame = 1
Query: 4 PKDPLEALKVDEVVMTAEDFFIAVGATMAIKDPEKQIEARKAAVEGKIKDVLEALEAKKSTSPSSKFLFGDSITIADLLIHAIVMSLEYDNFDGIPKSIVSDLAPSLKKINIEVMENPKVKEWYSSK 384
P+ PL +LKVDE+VM AED FI + +TM KD K++E + + GKIKD+LE + K + S F G S+TIAD+ +HA++ +++ GIP ++V D+ PSLK ++ VME+PKVK +Y+SK
Sbjct: 74 PECPLASLKVDEIVMIAEDVFINLFSTMGEKDEAKKLEKCQTLMAGKIKDLLEDIARKVEANKCSTFCVGASLTIADIQVHAVIATVQAGFLTGIPTTMVEDICPSLKALDHAVMEHPKVKAYYASK 200
BLAST of mRNA_H-elongata_contig10551.456.1 vs. uniprot
Match: D7G537_ECTSI (Glutathione S-transferase n=4 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G537_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 4.810e-22 Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 1
Query: 4 PKDPLEALKVDEVVMTAEDFFIAVGATMAIKDPEKQIEARKAAVEGKIKDVLEALEAKKSTSPSSKFLFGDSITIADLLIHAIVMSLEYDNFDGIPKSIVSDLAPSLKKINIEVMENPKVKEWYSSK 384
P D L ALKVDE+VM AED + M +D K +EGKIK ++ L AK + +PSSKF G+S TIADL +HA++ + E + G+P + ++D AP+L ++ ++E+PKVK +Y+SK
Sbjct: 78 PDDALAALKVDEIVMIAEDVMANMFKCMGQEDDT----VAKEVLEGKIKTLVGMLVAKLAANPSSKFFVGNSPTIADLQVHAVIKNFEANFLTGLPTTHIADTAPTLMEMQAALLEDPKVKAYYASK 200
BLAST of mRNA_H-elongata_contig10551.456.1 vs. uniprot
Match: A0A6H5JNS9_9PHAE (GST C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS9_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 2.720e-16 Identity = 46/121 (38.02%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 4 PKDPLEALKVDEVVMTAEDFFIAVGATMAIKDPEKQIEARKAAVEGKIKDVLEALEAKKSTSPSSKFLFGDSITIADLLIHAIVMSLEYDNFDGIPKSIVSDLAPSLKKINIEVMENPKVK 366
P D L AL+VDE+VM AED + M D K +EGKIK ++E L AK +T+ SSKF G+S TIA+L +HA++ + E + +P ++++D AP++ ++ + ++++PK K
Sbjct: 120 PDDALAALEVDEIVMIAEDVLTNMFKCMGQTDDT----VAKGVLEGKIKTLVEMLVAKLATNQSSKFFVGNSPTIANLQVHAVIKNFEANFLTDLPTTLIADTAPTVMEMEVALLQDPKEK 236
BLAST of mRNA_H-elongata_contig10551.456.1 vs. uniprot
Match: A0A6H5JE39_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE39_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 2.090e-14 Identity = 46/120 (38.33%), Postives = 70/120 (58.33%), Query Frame = 1
Query: 4 PKDPLEALKVDEVVMTAEDFFIAVGATMAIKDPEKQIEARKAAVEGKIKDVLEALEAKKSTSPSSKFLFGDSITIADLLIHAIVMSLEYDNFDGIPKSIVSDLAPSLKKINIEVMENPKV 363
P D L ALKVDE+VM AED + KD K + GKIK +++ L AK + +PSS F G+S IADL +HA++ + + + G+P + + D AP+L ++ ++E+PKV
Sbjct: 327 PDDALAALKVDEIVMIAEDVLTNMSKCTGQKDDT----VAKGVLVGKIKTLVDMLVAKLAANPSSMFFVGNSPNIADLQVHAVIKNSQANFLTGLPTTHIVDTAPTLMEMEAALVEDPKV 442
BLAST of mRNA_H-elongata_contig10551.456.1 vs. uniprot
Match: D7G5G1_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G1_ECTSI) HSP 1 Score: 74.7 bits (182), Expect = 3.760e-13 Identity = 47/121 (38.84%), Postives = 71/121 (58.68%), Query Frame = 1
Query: 4 PKDPLEALKVDEVVMTAEDFFIAVGATMAIKDPEKQIEARKAAVEGKIKDVLEALEAKKSTSPSSKFLFGDSITIADLL--IHAIVMSLEYDNFDGIPKSIVSDLAPSLKKINIEVMENPK 360
P D L ALKVDE+VM AED V A M +K +EGKIK ++E L ++ + + SSKF G TIADL +HA++ + E + G+P + ++D AP+L ++ ++E+PK
Sbjct: 78 PDDALAALKVDEIVMIAED----VMANMFKCVDQKDDTMANGLLEGKIKTLVEMLTSRLAANASSKFFVGHPPTIADLQARVHAVIKNFEANFLTGLPTTHIADTAPTLMEMQAALLEDPK 194
BLAST of mRNA_H-elongata_contig10551.456.1 vs. uniprot
Match: A0A662XXB3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXB3_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.770e-8 Identity = 43/126 (34.13%), Postives = 70/126 (55.56%), Query Frame = 1
Query: 10 DPLEALKVDEVVMTAEDF--FIAVGATMAIKDPEKQIEARKAAVEGKIKDVLEALEAKKSTSPSSKFLFGDSITIADLLIHAIVMSLEYDNFDGIPKSIVSDLAPSLKKINIEVMENPKVKEWYSS 381
D L A +VDE+ +D F GA++ KDP KQ+E RK G + L LE K+ + G ++T+ADL+I+ +V+SL+ G+P +I +L++I +V+ +PKV EW ++
Sbjct: 292 DMLTAYRVDELFAIIDDMYNFPTWGASVREKDPAKQLELRKELASGMVPKTLGFLE-KRVAQFKGPYATGANLTVADLVIYGMVLSLKV-GAPGLPSTITGSYT-NLQRIFAQVVAHPKVAEWNAA 414
BLAST of mRNA_H-elongata_contig10551.456.1 vs. uniprot
Match: T0QG46_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG46_SAPDV) HSP 1 Score: 59.7 bits (143), Expect = 1.010e-7 Identity = 38/126 (30.16%), Postives = 68/126 (53.97%), Query Frame = 1
Query: 10 DPLEALKVDEVVMTAEDFFIAVGATMAIKDPEKQIEARKAAVEGKIKDVLEALEAKK-STSPSSKFLFGDSITIADLLIHAIVMSLEYDNFDGIPKSIVSDLAPSLKKINIEVMENPKVKEWYSSK 384
DPL A +VDEV+ ++D + ++ +D EK++ RKA + + LEA+ + + FL G+++++AD+ + + +S+ + DGIP +I D P I V PKV+ WY+ +
Sbjct: 84 DPLGAYRVDEVLAASDDIVNKLIPSLFERDMEKKLAMRKALAAETLPTLYACLEARLVAANAKGPFLLGETLSLADIELFVMRLSMRSRHMDGIPTTIC-DKYPRWNAIADAVAVLPKVQAWYAQR 208
BLAST of mRNA_H-elongata_contig10551.456.1 vs. uniprot
Match: A0A067CCA8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CCA8_SAPPC) HSP 1 Score: 58.2 bits (139), Expect = 3.710e-7 Identity = 37/126 (29.37%), Postives = 68/126 (53.97%), Query Frame = 1
Query: 10 DPLEALKVDEVVMTAEDFFIAVGATMAIKDPEKQIEARKAAVEGKIKDVLEALEAKKSTSPSS-KFLFGDSITIADLLIHAIVMSLEYDNFDGIPKSIVSDLAPSLKKINIEVMENPKVKEWYSSK 384
+PL A +VDE++ ++D + ++ +D +K++ RK V + + +EA+ + S FL G+++++AD+ + + MS+ + DGIP +I D P I V PKV WY+S+
Sbjct: 84 NPLGAYRVDEILAASDDIVNTLIPSLFERDMDKKLAMRKELVAATLPTLYACVEARLVAANSQGPFLLGETLSLADIELFVMRMSMRSGHMDGIPTTIC-DNYPRWNAIADAVAALPKVHAWYASR 208
BLAST of mRNA_H-elongata_contig10551.456.1 vs. uniprot
Match: A0A2P4WXS9_9STRA (Glutathione S-transferase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXS9_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.730e-6 Identity = 43/126 (34.13%), Postives = 72/126 (57.14%), Query Frame = 1
Query: 10 DPLEALKVDEVVMTAEDFFIAVG--ATMAIKDPEKQIEARKAAVEGKIKDVLEALEAKKSTSPSSKFLFGDSITIADLLIHAIVMSLEYDNFDGIPKSIVSDLAPSLKKINIEVMENPKVKEWYSS 381
D LE+ VDE+ + ++ + AT+ +DPEKQ + R+ + I LE LE K+ + + F G +T+ADL I+A+++SL+ GIP +I +D +L + +V +PKV EWY++
Sbjct: 292 DMLESFHVDEIFVLIDEMYNKPEWRATVRERDPEKQKKMRENLSKEIIPKTLEFLE-KRVAAFNGSFATGTHLTVADLAIYALILSLKAGR-PGIPTNI-TDPYKNLLCVFDQVKAHPKVVEWYAA 414
BLAST of mRNA_H-elongata_contig10551.456.1 vs. uniprot
Match: A0A485LH14_9STRA (Aste57867_21263 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LH14_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 8.730e-5 Identity = 37/124 (29.84%), Postives = 62/124 (50.00%), Query Frame = 1
Query: 10 DPLEALKVDEVVMTAEDFFIAVGATMAIKDPEKQIEARKAAVEGKIKDVLEALEAKKSTSPSSKFLFGDSITIADLLIHAIVMSLEYDNFDGIPKSIVSDLAPSLKKINIEVMENPKVKEWYSS 381
+PL+A +VDE+V+ +D TM+I D E + R+ + ++ LEA+ + F D I++ADL + IV S++ G + I +D P + I V +PKV WY++
Sbjct: 86 NPLDAARVDEIVLFTDDILSVGINTMSIADEEARHAHRQVLSATTLLNMFTWLEARLVAKARGEMYFLDDISLADLAVFVIVGSMKTAG-PGFNRGI-ADGFPKIMSIYDAVQRHPKVVAWYAA 207 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10551.456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10551.456.1 >prot_H-elongata_contig10551.456.1 ID=prot_H-elongata_contig10551.456.1|Name=mRNA_H-elongata_contig10551.456.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp MTAEDFFIAVGATMAIKDPEKQIEARKAAVEGKIKDVLEALEAKKSTSPSback to top mRNA from alignment at H-elongata_contig10551:521..2925- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10551.456.1 ID=mRNA_H-elongata_contig10551.456.1|Name=mRNA_H-elongata_contig10551.456.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2405bp|location=Sequence derived from alignment at H-elongata_contig10551:521..2925- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10551:521..2925- >mRNA_H-elongata_contig10551.456.1 ID=mRNA_H-elongata_contig10551.456.1|Name=mRNA_H-elongata_contig10551.456.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=690bp|location=Sequence derived from alignment at H-elongata_contig10551:521..2925- (Himanthalia elongata Himel1 dioecious)back to top |