mRNA_H-elongata_contig105433.450.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig105433.450.1
Unique NamemRNA_H-elongata_contig105433.450.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig105433.450.1 vs. uniprot
Match: A0A5N6LW24_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LW24_9ASTR)

HSP 1 Score: 180 bits (457), Expect = 1.090e-45
Identity = 144/465 (30.97%), Postives = 210/465 (45.16%), Query Frame = 1
Query:    4 FVDDYTRFRVVKFVKRKSGTTAALLSLIADYITPQELSIKYVRTNNGGKFEG-EFQRELDRRSITHEHTPSDTPQYNGVAERALGLLRGKAIALMEELDNIINVPREKLWAQAMLFACDVTNKSVTTSTDGVKSPYELWFGKIPTVDHLRPFGAMGYVRQSVREHKMAPKGEKCAFMGIPRN------FPTGTVSVLLTQEVFLKHEQEQQQKEGEAGYISGSADLEGPALPALRKLTID-----GNVPPILPSRTRSRRPHTNVEEVAMHCFLLGIEESDVEDALACDDGGQMAMHTTLDIQEPRNGRQAMESPEWDDWRKAEEIDMRGIVDKCVYKQVARPKDKLVVGKKMLYKRKVGQDGKVEKYKCRLVAQGSWQVEGVHYTEKYSPTPSTASIRMFLATEAAKDGELHYFDAEQAFLAADIDEELYIEIPEEY--RKFPGAVGRLNKAIYGLVQAGRCWN 1356
            F+DDY+R+  V  +K K  T         +       +IK +R++ GG++   EF   L  R I  + TP  TPQ NGV+ER    L     ++M       N+P    W+ A++ A  + N + T   +  K+PYE+WFG  P + +LR +G   YV +   + K+ P+GEK  F+G           P   +  +  +  FL+ E   +   G    I    ++  P   A    T D      N   +  S  RS R     +    H                  DG ++ +    D  EP N + A+  PE   W  A   +M+ + D  V+  V  P     VG K ++KRK    G V  YK RLVA+G  Q +GV Y E +SP     SIR+ LA  A  D E+   D + AFL   + E++Y+  PE +   K+P  V +LNK+IYGL QA RCWN
Sbjct:  191 FIDDYSRYAYVYLMKHKHETFEKFKEFQNEVENQLGKTIKALRSDRGGEYLSLEFINHLKERGIISQPTPPGTPQLNGVSERRNRTLLDMVRSMMCRT----NLPHS-FWSFALMTAARIVNLAPTKKVN--KTPYEIWFGTKPNLSYLRVWGCNAYVTRDSND-KLDPRGEKVVFVGYHNKSGYYFYHPDANLISIKRKGHFLEKEFLDR---GTGSNIVNLEEIREPQTTADEVGTSDQQEVVANESDLNTSIRRSSRTRNAPDRYLGHL-----------------DGSEVLLVAEPD-NEPTNHKTAISDPESAKWLDAMNSEMQSMRDNQVWDLVELPPGSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPEGFVDPKYPNKVCKLNKSIYGLKQASRCWN 626          
BLAST of mRNA_H-elongata_contig105433.450.1 vs. uniprot
Match: UPI00202469D1 (DDE-type integrase/transposase/recombinase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI00202469D1)

HSP 1 Score: 180 bits (457), Expect = 1.100e-45
Identity = 140/466 (30.04%), Postives = 224/466 (48.07%), Query Frame = 1
Query:   10 DDYTRFRVVKFVKRKSGTTAALLSLIADYITPQELSIKYVRTNNGGKF-EGEFQRELDRRSITHEHTPSDTPQYNGVAERALGLLRGKAIALMEELDNIINVPREKLWAQAMLFACDVTNKSVTTSTDGVKSPYELWFGKIPTVDHLRPFGAMGYVRQSVREHKMAPKGEKCAFMGIPRNFPTGTVSVLLTQEVFLKHEQEQQQKEGEAGYISGSADLEGPALPALRKLTIDGNVPPILPSRTRSRRPHTNVEEV-AMHCFLLGIEESDVEDALACD-------------DGGQMAMHTTLDIQEPRNGRQAMESPEWDDWRKAEEIDMRGIVDKCVYKQVARPKDKLVVGKKMLYKRKVGQDGKVEKYKCRLVAQGSWQVEGVHYTEKYSPTPSTASIRMFLATEAAKDGELHYFDAEQAFLAADIDEELYIEIPEEY--RKFPGAVGRLNKAIYGLVQAGRCWN 1356
            DD +R+  V  +K KS T         +    ++  IK++R++ GG++   EF   L +  I  + TP  TPQ NGV+ER    L    + ++  + ++ ++P    W  A+  A    N++ + S +   +PYELWFGK P +  L+ +G   YV++ ++  K+ PK EKC F+G P+     T  +    ++F+       +KE  +  +SG            RK+ +D     +LP    +     NV EV A     +  ++ +  D +A +              G  +     LD  EP N  +AM  P+ D W +A + ++  + +  V+     P D+  +  K ++K+K   DG V  YK RLVA+G  QV+GV Y E +SP     S+R+ LA  A  D E+   D + AFL   + EELY+  PE +   K    V +L ++IYGLVQA R WN
Sbjct:  194 DDLSRYGYVYLMKHKSETFEKFKEFQNEVENQRDRKIKFLRSDRGGEYLSHEFGTHLRKCGIVSQLTPPGTPQRNGVSERRNRTL----LDMVRSMMSLTDLPLS-FWGYALETATFTLNRAPSKSVE--TTPYELWFGKKPKLSFLKVWGCDAYVKK-LQPEKLEPKSEKCVFIGYPKETIGYTFYLRSEGKIFVAKNGSFLEKEFLSKEVSG------------RKVELDE----VLPLEPENGATQENVPEVPAPTREEVNDDDHETSDQVATELRRSTRTRSAPEWYGNPVLEIMLLDNGEPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWN 635          
BLAST of mRNA_H-elongata_contig105433.450.1 vs. uniprot
Match: A0A7D9D6Q5_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q5_PARCT)

HSP 1 Score: 178 bits (451), Expect = 7.020e-45
Identity = 146/487 (29.98%), Postives = 228/487 (46.82%), Query Frame = 1
Query:    4 FVDDYTRFRVVKFVKRKSGTTAALLSLIADYITPQELSIKYVRTNNGGKFEG-EFQRELDRRSITHEHTPSDTPQYNGVAERALGLLRGKAIALMEELDNIINVPREKLWAQAMLFACDVTNKSVTTSTDGVKSPYELWFGKIPTVDHLRPFGAMGYVR-QSVREHKMAPKGEKCAFMGIPRNFPTGTVSVLLTQEVFLKHEQEQQ----QKEGEAGYISGSADLEGPA---LPALRKLT-IDGNVPPILPSRTRSRRPHTNVE-----------------------EVAMHCFLLGIEESDVEDALACDDGGQMAMHTTLDIQEPRNGRQAMESPEWDDWRKAEEIDMRGIVDKCVYKQVARPKDKLVVGKKMLYKRKVGQDGKVEKYKCRLVAQGSWQVEGVHYTEKYSPTPSTASIRMFLATEAAKDGELHYFDAEQAFLAADIDEELYIEIPEEY--RKFPGAVGRLNKAIYGLVQAGRCWNN 1359
            F+DDY+R+  V F+K KS             +      IK + ++NGG++   EF+  L +  I H+ +    P  NGVAER    +    +     + +  ++P E  WA+A+  +  V N+S T + + + +PYE  F K P V +LR FG + Y+     +  K+  K  K  FMG    +P G     L   V  K  + +     +K+     I  S++ +  A   +P + + T +DGN          ++R   N E                        V  H         D E  LA D         T DI EP N  +A       +W++A + +   +++   ++ V+ PK K VVG K ++K K  ++G V++YK RLVAQG  Q EGV Y+E +SP     +IR  LA   AK+ E+H  D + AFL  +++EE+Y+  P+ Y  ++ P  V +L K+IYGL Q+ RCWNN
Sbjct:  506 FIDDYSRYIFVYFMKNKSEVLEKFKEFHTYAMNITGKPIKVLHSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAER----MNRTVVETTRSMLSHAHIPNE-FWAEAVNTSVYVRNRSPTKALNDI-TPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMG----YPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDIPIMIEETPVDGNENQ---DEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGEHRMRTPPNRFDEECYLAND--------ITADINEPINMDEAFSGEHSAEWKQATDSENNSLIENETWELVSLPKGKNVVGSKWVFKVKTDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNLEEEIYMRQPDGYVNKELPNHVCKLKKSIYGLKQSARCWNN 971          
BLAST of mRNA_H-elongata_contig105433.450.1 vs. uniprot
Match: A0A5N6MMD4_9ASTR (Uncharacterized protein n=6 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MMD4_9ASTR)

HSP 1 Score: 178 bits (451), Expect = 8.430e-45
Identity = 143/465 (30.75%), Postives = 211/465 (45.38%), Query Frame = 1
Query:    4 FVDDYTRFRVVKFVKRKSGTTAALLSLIADYITPQELSIKYVRTNNGGKFEG-EFQRELDRRSITHEHTPSDTPQYNGVAERALGLLRGKAIALMEELDNIINVPREKLWAQAMLFACDVTNKSVTTSTDGVKSPYELWFGKIPTVDHLRPFGAMGYVRQSVREHKMAPKGEKCAFMGIPRN------FPTGTVSVLLTQEVFLKHEQEQQQKEGEAGYISGSADLEGPALPALRKLTID-----GNVPPILPSRTRSRRPHTNVEEVAMHCFLLGIEESDVEDALACDDGGQMAMHTTLDIQEPRNGRQAMESPEWDDWRKAEEIDMRGIVDKCVYKQVARPKDKLVVGKKMLYKRKVGQDGKVEKYKCRLVAQGSWQVEGVHYTEKYSPTPSTASIRMFLATEAAKDGELHYFDAEQAFLAADIDEELYIEIPEEY--RKFPGAVGRLNKAIYGLVQAGRCWN 1356
            F+DDY+R+  V  +K K  T         +       +IK +R++ GG++   EF   L  R I  + TP  TPQ NGV+ER    L     ++M      IN+P    W+ A++ A  + N + T   +  K+PYE+WFG  P + +L+ +G   YV +   + K+ P+GEK  F+G           P   +  +  +  FL+ E   +   G    I    ++  P   A    T D      N   I  S  RS R     +    H                  DG ++ +    D  EP N + A+  P+   W  A   +M+ + D  V+  V  P     VG K ++KRK    G V  YK RLVA+G  Q +GV Y E +SP     SIR+ LA  A  D E+   D + AFL   + E++Y+  P+ +   K+P  V +LNK+IYGL QA RCWN
Sbjct:  524 FIDDYSRYAYVYLMKHKHETFEKFKEFQNEVENQLGKTIKALRSDRGGEYLSLEFINHLKERGIVSQPTPPGTPQLNGVSERRNRTLLDMVRSMMCR----INLPHS-FWSFALMTAARIVNLAPTKKVN--KTPYEIWFGTKPNLSYLKVWGCDAYVTRD-SDDKLDPRGEKVVFVGYHNRSGYYFYHPDANLISIKRKGHFLEKEFLDR---GTGSNIVDLEEIREPQTTADEVGTSDQQEVVANESDINTSIRRSSRTRNAPDRYLWHL-----------------DGSEVLVVAEPDS-EPTNYKSAIIDPKSAKWLDAMNSEMQSMRDNQVWDLVELPPGSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRVLLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPDGFIDPKYPSKVCKLNKSIYGLKQASRCWN 959          
BLAST of mRNA_H-elongata_contig105433.450.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID)

HSP 1 Score: 176 bits (447), Expect = 2.800e-44
Identity = 141/476 (29.62%), Postives = 224/476 (47.06%), Query Frame = 1
Query:    4 FVDDYTRFRVVKFVKRKSGTTAALLSLI----------ADYITPQELSIKYVRTNNGGKFEG-EFQRELDRRSITHEHTPSDTPQYNGVAERALGLLRGKAIALMEELDNIINVPREKLWAQAMLFACDVTNKSVTTSTDGVKSPYELWFGKI-PTVDHLRPFGAMGYVR--QSVREHKMAPKGEKCAFMGIPRN------FPTGTVSVLLTQEV-FLKHEQEQQQKEGEAGYISGSADLEGPALPALRKLTIDGNVPPILPSRTRSRRPHTNVEEVAMHCFLLGIEESDVEDALACDDGGQMAMHTTLDIQEPRNGRQAMESPEWDDWRKAEEIDMRGIVDKCVYKQVARPKDKLVVGKKMLYKRKVGQDGKVEKYKCRLVAQGSWQVEGVHYTEKYSPTPSTASIRMFLATEAAKDGELHYFDAEQAFLAADIDEELYIEIPEEY--RKFPGAVGRLNKAIYGLVQAGRCWNNK 1362
            F+DDY+R+  V  +K KS   A     +             +  +  +I+ +R++NGG++   EF      R I+ E T   +PQ NGVAER    L   A +++      I     K WA+A+  AC V N+S T       +PYE+W  K  P V +L+ FG   YV    + R+ K   K   C F+G P N      +   T  +  +++V F++ + + ++ +G         +   P  P         N  P+     R+RRP   +  +    + L              D   +A+   +D +EP    +A+ SP  + W+ A + +   +++   +K V  P DK +VG K ++K K G DGK+++ K RLVAQG  Q  G+ Y + ++P     SIR  LA     D ELH  D + AFL  D++E+++++ PE +  R  P    +L K+IYGL Q+ RCWN K
Sbjct:  491 FIDDYSRYTTVYMMKHKSEVLAKFTEFVNLVENRTGLKVKRLNVENQAIQRLRSDNGGEYTSTEFTSFCTDRGISREPTIPYSPQQNGVAERMNRTLLETARSMLHHAQKPI-----KFWAEAISTACYVRNRSPTAFLKET-TPYEIWHRKKKPDVSNLKVFGCKSYVHVPDTKRKGKFDKKSISCIFVGYPSNENGFKFYDPQTRKMFRSRDVTFVEKDFDIEKFDGTNSNFEFFPESTEPDEPE-DNXXXXXNARPV-----RTRRPPERLNVLTGEWWNLI-------------DAASIAI---VDEEEPTTIEEALSSPNAELWKDAIQNEYDSLIENETWKLVEMPPDKNLVGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGFINRDNPNMACKLQKSIYGLKQSARCWNEK 938          
BLAST of mRNA_H-elongata_contig105433.450.1 vs. uniprot
Match: A0A8I6XT42_HORVV (Uncharacterized protein n=6 Tax=cellular organisms TaxID=131567 RepID=A0A8I6XT42_HORVV)

HSP 1 Score: 175 bits (444), Expect = 6.760e-44
Identity = 141/469 (30.06%), Postives = 228/469 (48.61%), Query Frame = 1
Query:    4 FVDDYTRFRVVKFVKRKSGTTAALLSLIADYITPQELSIKYVRTNNGGKFEG-EFQRELDRRSITHEHTPSDTPQYNGVAERALGLLRGKAIALMEELDNIINVPREKLWAQAMLFACDVTNKSVTTSTDGVKSPYELWFGKIPTVDHLRPFGAMGYVRQSVREHKMAPKGEKCAFMGIPRNFPTGTVSVLLTQEVFLKHEQEQQQKEGEAGYISGSADLEGPALPALRKLTIDGNVPPILPSRTRSRRPHTNV------EEVAMHCFLLGIEESDVEDALACDD-------GGQMAMHTTLDIQEPRNGRQAMESPEWDDWRKAEEIDMRGIVDKCVYKQVARPKDKLVVGKKMLYKRKVGQDGKVEKYKCRLVAQGSWQVEGVHYTEKYSPTPSTASIRMFLATEAAKDGELHYFDAEQAFLAADIDEELYIEIPEEY--RKFPGAVGRLNKAIYGLVQAGRCWNNK 1362
            F DD +R+  V  +K KS T        ++    +   IK++R++ GG++   EF   L +  I  + TP  TPQ NGV+ER    L    + ++  + ++ ++P    W  A+       N++ + S +   +PYELW+GK P +  L+ +G   YV++ ++  K+ PK +KC F+G P+     T  +    +VF+       +KE    ++S   DL G      RK+ +D  V P++P    + +  T+V      EEV        ++ S VE   +          G  +     LD  EP N  +AM  P+ + W +A + ++  + +  V+     P+ +  +  K ++KRK   DG V  YK RLVA+G  QV+GV Y E +SP      +R+ LA  A  D E+   D + AFL   + EELY+  PE +   K    V +L ++IYGLVQA R WN +
Sbjct:  420 FTDDLSRYGYVYLMKHKSETFEKFKQFQSEVENHRNKKIKFLRSDRGGEYLSFEFGAHLRQCGIVSQLTPPGTPQRNGVSERRNRTL----LKMVRSMMSLTDLPLS-FWGYALETVAFTLNRAPSKSVE--TTPYELWYGKRPKLSFLKVWGCDAYVKK-LQPEKLEPKAKKCIFIGYPKETVGYTFYLKSEGKVFVAKNGAFLEKE----FLS--RDLSG------RKIELDEVVEPLIPLDGGAGQGETSVVATPVEEEVNDDDHETPVQVS-VEPRRSTRPRAAPEWYGNPVLSIMLLDNNEPANYEEAMVGPDSNKWLEAMKSEIGSMYENKVWTLEVLPEGRKAIQNKWIFKRKTDADGNVTVYKARLVAKGFPQVQGVDYDETFSPVAMRKFVRIMLAIAAFFDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNANKVCKLQRSIYGLVQASRSWNKR 867          
BLAST of mRNA_H-elongata_contig105433.450.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT)

HSP 1 Score: 174 bits (441), Expect = 1.490e-43
Identity = 148/481 (30.77%), Postives = 232/481 (48.23%), Query Frame = 1
Query:    4 FVDDYTRFRVVKFVKRKSGTTAALLSL--IADYITPQELSIKYVRTNNGGKFEG-EFQRELDRRSITHEHTPSDTPQYNGVAERALGLLRGKAIALMEELDNIINVPREKLWAQAMLFACDVTNKSVTTSTDGVKSPYELWFGKIPTVDHLRPFGAMGYVR-QSVREHKMAPKGEKCAFMGIPRNFPTGTVSVLLTQEVFLKHEQEQQ----QKEGEAGYISGSADLEGPA---LPALRKLT-IDGNVPPILPSRTRSRRPHTNVE---------------EVAMHCFLLGIEESDVEDALACDDGGQMAMHTTLDIQEPRNGRQAMESPEWDDWRKAEEIDMRGIVDKCVYKQVARPKDKLVVGKKMLYKRKVGQDGKVEKYKCRLVAQGSWQVEGVHYTEKYSPTPSTASIRMFLATEAAKDGELHYFDAEQAFLAADIDEELYIEIPEEY--RKFPGAVGRLNKAIYGLVQAGRCWNN 1359
            F+DDY+R+  V F+K KS            A  IT +   IK +R++NGG++   EF+  L +  I H+ +    P  NGVAER    +    +     + +  ++P E  WA+A+  +  V N+S T + + + +PYE  F K P V +LR FG + Y+     +  K+  K  K  FMG    +P G     L   V  K  + +     +K+     I  S++ +  A   +P + + T +DGN          ++R   N E               E  M+      E          D+   +A   T DI EP N  +A       +W++A + +   +++   ++ V+ PK K VVG K ++K K  ++G V++YK RLVAQG  Q EGV Y+E +SP     +IR  LA   AK+ E+H  D + AFL  ++ EE+Y+  P+ Y  ++ P  V +L K+IYGL Q+ RCWNN
Sbjct:  419 FIDDYSRYTFVYFMKNKSEVLEKFKEFHTFATNITGKP--IKVLRSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAER----MNRTVVETTRSMLSHAHIPNE-FWAEAVNTSVYVRNRSPTKALNDI-TPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMG----YPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDIPIMIEETPVDGNENQ---DEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGERRMRRPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSEYNSLIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNL-EEIYMRQPDGYVNKELPNHVCKLKKSIYGLKQSARCWNN 883          
BLAST of mRNA_H-elongata_contig105433.450.1 vs. uniprot
Match: A0A2N9E251_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9E251_FAGSY)

HSP 1 Score: 174 bits (442), Expect = 1.540e-43
Identity = 130/458 (28.38%), Postives = 224/458 (48.91%), Query Frame = 1
Query:    4 FVDDYTRFRVVKFVKRKSGTTAALLSLIADYITPQELSIKYVRTNNGGKF-EGEFQRELDRRSITHEHTPSDTPQYNGVAERALGLLRGKAIALMEELDNIINVPREKLWAQAMLFACDVTNKSVTTSTDGVKSPYELWFGKIPTVDHLRPFGAMGYVRQSVREH-KMAPKGEKCAFMGIPRNFPTGTVSVLLTQEVF-LKHEQEQQQKEGEAGYISGS---ADLEGPALPALRKLTIDGNVPPILPSRTRSRRPHTNVEEVAMHCFLLGIEESDVEDALACDDGGQMAMHTTLDIQEPRNGRQAMESPEWDDWRKAEEIDMRGIVDKCVYKQVARPKDKLVVGKKMLYKRKVGQDGKVEKYKCRLVAQGSWQVEGVHYTEKYSPTPSTASIRMFLATEAAKDGELHYFDAEQAFLAADIDEELYIEIPE--EYRKFPGAVGRLNKAIYGLVQAGRCW 1353
            F+DDYTR+  V+ +  +          +A+     E S+K +RT+ G ++   +F+   + + I  + T S+TPQ NGVAER    L     ++M + +  I+      W  A+L A  + N+  + S     +PYELW G+ P ++HLRP+G+ G+V  +  ++ K+ P+  K  F+     +   +   ++  +++ L+ ++       E G +      A+  G  L     +T+D +        +++RR  +       H  + G       + L CD           D+ EP +  +A+ SP+ D+W  A + +M  +    V++ V  P  +  +G K + K K   DG +++YK RLVA+G  Q EG+ Y + +SP    ASIR+ L+  A +D EL   D + AFL  ++DEE+Y+  P   E +     V RL ++IYGL Q+ R W
Sbjct: 2098 FIDDYTRYGYVQLIAHRYEALDCFKRFVAEVENQHEKSLKALRTDRGREYLSDQFKDLCEEKGIRRQLTISNTPQQNGVAERRNRTLLDMVRSMMAQANLPIS-----FWGDALLTAAYILNRVPSQSVSS--TPYELWKGEKPNLEHLRPWGSAGFVHSTAHKYGKLGPRARKHIFI----RYSDSSKGYVIDLDLYELEEDEGTLPSSSEGGGLVPRPVIAEDSGSDLQPSGSITLDQD--------SQARRVSSRGHIPRRHFEIEG-------NVLLCD---------AKDVDEPASFSEALHSPDRDEWMTAMQEEMSSMDKNNVWELVDLPPGRKTIGNKWVLKVKRKADGSIDRYKARLVAKGYTQREGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPAGFEAKGHERKVCRLKRSIYGLKQSSRQW 2520          
BLAST of mRNA_H-elongata_contig105433.450.1 vs. uniprot
Match: A0A446P200_TRITD (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A446P200_TRITD)

HSP 1 Score: 174 bits (441), Expect = 1.730e-43
Identity = 139/458 (30.35%), Postives = 221/458 (48.25%), Query Frame = 1
Query:    4 FVDDYTRFRVVKFVKRKSGTTAALLSLIADYITPQELSIKYVRTNNGGKFEG-EFQRELDRRSITHEHTPSDTPQYNGVAERALGLLRGKAIALMEELDNIINVPREKLWAQAMLFACDVTNKSVTTSTDGVKSPYELWFGKIPTVDHLRPFGAMGYVRQSVREHKMAPKGEKCAFMGIPRNFPTGTVSVLLTQEVFLKHEQEQQQKEGEAGYISG-SADLEGPALPA-LRKLTIDGNVPPILPSRTRSRRPHTNVEEVAMHCFLLGIEESDVEDALACDDGGQMAMHTTLDIQEPRNGRQAMESPEWDDWRKAEEIDMRGIVDKCVYKQVARPKDKLVVGKKMLYKRKVGQDGKVEKYKCRLVAQGSWQVEGVHYTEKYSPTPSTASIRMFLATEAAKDGELHYFDAEQAFLAADIDEELYIEIPEEYRKFPGA--VGRLNKAIYGLVQAGRCWNNK 1362
            F DD +R+  +  +K KS T        ++    +   IK++R + GG++   EF   L    I  + TP  TPQ NGV+ER    L    + ++  + ++ N+P    W  A+  A    N++ + S +   +PYELWFGK P +  L+ +G   YV++ ++  K+ PK EKC F+G P+     T       + F+       +KE  +  +SG   +L+   +P+ L K +       + P+   +   + N  E +          + V  A     G  +     LD  EP N  +AM SP+   W +A + +M  + +  V+  V  P D+  +  K ++K+K   DG V  YK RLVA+G  QV+GV Y E + P     S+R+ LA  A  D E+   D + AFL   ++EELY+   E +    GA  V +L ++IYGLVQA R WN +
Sbjct:  521 FTDDLSRYGYIYLMKHKSETFEKFKEFQSEVENHRNKKIKFLRPDRGGEYLSYEFGVHLKNCGIVSQLTPPGTPQRNGVSERRNRTL----LDMVRSMISLTNLPLS-FWGYALETAAFTLNRAPSKSVE--MTPYELWFGKKPKLSFLKVWGCDAYVKK-LQPDKLEPKSEKCVFIGYPKETIGYTFYHKSEGKTFVAKFGNFLEKEFLSKEVSGRKVELDEVTVPSPLLKSSTSQKTVSVTPTPV-NEEANDNDHETSDQDTTEPRRSTRVRSAPEWY-GNPVLEVMLLDHDEPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGVDYDETFLPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQLEGFVDPKGANKVCKLQRSIYGLVQASRSWNKR 968          
BLAST of mRNA_H-elongata_contig105433.450.1 vs. uniprot
Match: A0A8I7BEN6_HORVV (Uncharacterized protein n=26 Tax=cellular organisms TaxID=131567 RepID=A0A8I7BEN6_HORVV)

HSP 1 Score: 174 bits (440), Expect = 2.330e-43
Identity = 133/454 (29.30%), Postives = 224/454 (49.34%), Query Frame = 1
Query:   10 DDYTRFRVVKFVKRKSGTTAALLSLIADYITPQELSIKYVRTNNGGKF-EGEFQRELDRRSITHEHTPSDTPQYNGVAERALGLLRGKAIALMEELDNIINVPREKLWAQAMLFACDVTNKSVTTSTDGVKSPYELWFGKIPTVDHLRPFGAMGYVRQSVREHKMAPKGEKCAFMGIPRNFPTGTVSVLLTQEVFLKHEQEQQQKEGEAGYISG-SADLEGPALPAL-RKLTIDGNVPPILPSRTRSRRPHTNVEEVAMHCFLLGIEESDVEDALACDDGGQMAMHTTLDIQEPRNGRQAMESPEWDDWRKAEEIDMRGIVDKCVYKQVARPKDKLVVGKKMLYKRKVGQDGKVEKYKCRLVAQGSWQVEGVHYTEKYSPTPSTASIRMFLATEAAKDGELHYFDAEQAFLAADIDEELYIEIPEEYRKFPGA--VGRLNKAIYGLVQAGRCWN 1356
            DD +R+  +  +K KS T        ++    ++  IK +R++ GG++   EF   L +  I  + TP  TPQ NGV+ER    L    + ++  + ++ ++P    W  A+       N++ + S +   +PYELWF K P +  L+ +G   YV++ ++  K+ PK EKC F+G P+     T  +    + F+       +KE  +  +SG   +L+    P L ++ +    V P++P+ T     + +  E +          + V  A     G  +     LD  EP N  +AM  P+ + W +A + ++  + +  V+  V  P ++  +  K ++K+K   +G V  YK RLVA+G  Q++GV Y E +SP     S+R+ LA  A  D E+   D + AFL  ++ EELY+  PE +    GA  V +L ++IYGLVQA R WN
Sbjct:  522 DDLSRYGYIYLMKHKSETFEKFKEFQSEVENQRDRKIKCLRSDRGGEYLSHEFGTHLRKYGIVSQLTPPGTPQRNGVSERRNRTL----LDMVRSMMSLTDLPLS-FWGYALETTAFTLNRAPSKSVE--TTPYELWFSKKPKLSFLKVWGCDAYVKK-LQPEKLEPKAEKCVFIGYPKETIGYTFYLRSEGKTFVAKNGSFLEKEFLSKEVSGRKVELDEVITPPLEQESSATQEVVPVVPTPTEEE-VNDDDHEASDQVTTEPRRSTRVRSAPEWY-GNPVMEIMLLDNGEPSNYEEAMAGPDSNKWLEAMKSEIGSMYENKVWTLVDLPDERQAIENKWIFKKKTDANGNVTVYKARLVAKGFRQIQGVDYEETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGNLKEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWN 965          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105433.450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5N6LW24_9ASTR1.090e-4530.97Integrase catalytic domain-containing protein n=2 ... [more]
UPI00202469D11.100e-4530.04DDE-type integrase/transposase/recombinase n=3 Tax... [more]
A0A7D9D6Q5_PARCT7.020e-4529.98Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A5N6MMD4_9ASTR8.430e-4530.75Uncharacterized protein n=6 Tax=Mikania micrantha ... [more]
A0A7M6DPI8_9CNID2.800e-4429.62Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A0A8I6XT42_HORVV6.760e-4430.06Uncharacterized protein n=6 Tax=cellular organisms... [more]
A0A7D9HXK4_PARCT1.490e-4330.77Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2N9E251_FAGSY1.540e-4328.38Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A446P200_TRITD1.730e-4330.35Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A8I7BEN6_HORVV2.330e-4329.30Uncharacterized protein n=26 Tax=cellular organism... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105433contigH-elongata_contig105433:11..1654 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score172.6
Seed ortholog evalue4.3e-40
Seed eggNOG ortholog400682.PAC_15712908
EggNOG free text desc.Encoded by
EggNOG OGs38DPC@33154,3BI7U@33208,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size1362
Cds size1362
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929587.2098002-CDS-H-elongata_contig105433:10..7961622929587.2098002-CDS-H-elongata_contig105433:10..796Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105433 11..796 -
1691679081.2214754-CDS-H-elongata_contig105433:10..7961691679081.2214754-CDS-H-elongata_contig105433:10..796Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105433 11..796 -
1622929587.2237651-CDS-H-elongata_contig105433:1078..16541622929587.2237651-CDS-H-elongata_contig105433:1078..1654Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105433 1079..1654 -
1691679081.2333477-CDS-H-elongata_contig105433:1078..16541691679081.2333477-CDS-H-elongata_contig105433:1078..1654Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105433 1079..1654 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105433.450.1prot_H-elongata_contig105433.450.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig105433 11..1654 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig105433.450.1

>prot_H-elongata_contig105433.450.1 ID=prot_H-elongata_contig105433.450.1|Name=mRNA_H-elongata_contig105433.450.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=454bp
IFVDDYTRFRVVKFVKRKSGTTAALLSLIADYITPQELSIKYVRTNNGGK
FEGEFQRELDRRSITHEHTPSDTPQYNGVAERALGLLRGKAIALMEELDN
IINVPREKLWAQAMLFACDVTNKSVTTSTDGVKSPYELWFGKIPTVDHLR
PFGAMGYVRQSVREHKMAPKGEKCAFMGIPRNFPTGTVSVLLTQEVFLKH
EQEQQQKEGEAGYISGSADLEGPALPALRKLTIDGNVPPILPSRTRSRRP
HTNVEEVAMHCFLLGIEESDVEDALACDDGGQMAMHTTLDIQEPRNGRQA
MESPEWDDWRKAEEIDMRGIVDKCVYKQVARPKDKLVVGKKMLYKRKVGQ
DGKVEKYKCRLVAQGSWQVEGVHYTEKYSPTPSTASIRMFLATEAAKDGE
LHYFDAEQAFLAADIDEELYIEIPEEYRKFPGAVGRLNKAIYGLVQAGRC
WNNK
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mRNA from alignment at H-elongata_contig105433:11..1654-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig105433.450.1 ID=mRNA_H-elongata_contig105433.450.1|Name=mRNA_H-elongata_contig105433.450.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1644bp|location=Sequence derived from alignment at H-elongata_contig105433:11..1654- (Himanthalia elongata Himel1 dioecious)
ATTTTTGTGGACGACTACACCCGTTTCAGAGTGGTAAAGTTCGTTAAAAG GAAGAGTGGCACAACGGCCGCGCTTTTGTCTTTGATTGCAGATTATATCA CCCCGCAGGAGCTGTCGATCAAGTACGTACGGACCAACAATGGTGGCAAG TTCGAGGGGGAATTTCAGCGCGAACTAGACCGGCGCAGCATCACGCACGA GCATACCCCGTCAGACACGCCGCAGTACAACGGGGTGGCCGAACGCGCGC TTGGACTTTTACGAGGAAAGGCGATCGCCCTGATGGAGGAGTTAGACAAC ATCATCAACGTGCCGCGAGAGAAGTTGTGGGCCCAGGCAATGCTTTTTGC ATGTGACGTCACCAACAAGTCAGTCACGACGTCAACGGATGGGGTTAAGT CTCCGTACGAACTGTGGTTTGGAAAAATTCCTACTGTCGATCATTTGCGA CCGTTTGGAGCTATGGGATACGTGCGACAGAGCGTACGCGAACACAAGAT GGCGCCAAAAGGAGAGAAATGCGCATTCATGGGAATTCCACGCAACTTTC CCACTGGCACCGTTAGCGTGCTACTTGTAAGGACAAGGCAGATCATGGAG CGGCAGGCCGTGCAGTGAATCGCCGGGCCTAAAAAGACCGGGGGCGACGA CACCGACAGTGACGACCGCTGCATGAAGCTGGCGGGAGGCGAAACCATTT TGGGGAGGGGGACTGCGCAGCTAAATGTTCAGGAGCTGAGACAGGAATAG CAGTTGGAGACGCATGAAGCGTTTTCAGAGCACGAAAGGGGGACGCAGGA GGCGTCTTCAGAGCATGAAGGGGGGACGCAAGAGACGTTTTCGGAACTGG AGGAGGAGACGCAGGAGGTGTTTTTGAAACACGAGCAAGAGCAGCAACAA AAGGAGGGTGAAGCGGGATATATATCGGGGTCGGCGGATTTGGAGGGACC GGCCTTACCCGCGCTGCGCAAGCTCACCATAGACGGCAATGTCCCGCCCA TATTACCATCGCGTACGAGGAGTCGAAGACCTCATACCAATGTGGAGGAA GTAGCGATGCATTGTTTCTTGCTAGGGATCGAAGAATCCGACGTGGAGGA TGCGTTGGCGTGTGACGACGGGGGGCAGATGGCCATGCACACGACGCTGG ATATACAGGAACCGAGGAATGGGCGACAGGCGATGGAATCGCCGGAATGG GACGATTGGCGGAAAGCAGAGGAAATAGATATGCGTGGAATCGTCGATAA GTGCGTTTATAAGCAAGTGGCTCGGCCGAAGGATAAACTTGTGGTTGGCA AGAAAATGCTCTACAAACGAAAAGTCGGACAGGACGGCAAGGTCGAGAAA TACAAGTGCCGGCTTGTAGCTCAAGGGTCCTGGCAGGTAGAGGGTGTGCA CTATACGGAGAAATACTCACCCACGCCATCGACCGCATCAATCCGAATGT TTTTGGCCACAGAAGCGGCCAAGGATGGTGAGCTGCACTATTTCGACGCG GAGCAGGCATTCCTGGCAGCGGACATTGATGAGGAATTGTACATTGAGAT CCCCGAGGAGTACCGGAAGTTTCCGGGGGCAGTGGGACGACTGAACAAGG CCATTTACGGACTCGTACAGGCGGGGAGGTGCTGGAACAACAAG
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Coding sequence (CDS) from alignment at H-elongata_contig105433:11..1654-

>mRNA_H-elongata_contig105433.450.1 ID=mRNA_H-elongata_contig105433.450.1|Name=mRNA_H-elongata_contig105433.450.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2724bp|location=Sequence derived from alignment at H-elongata_contig105433:11..1654- (Himanthalia elongata Himel1 dioecious)
ATTTTTGTGGACGACTACACCCGTTTCAGAGTGGTAAAGTTCGTTAAAAG
GAAGAGTGGCACAACGGCCGCGCTTTTGTCTTTGATTGCAGATTATATCA
CCCCGCAGGAGCTGTCGATCAAGTACGTACGGACCAACAATGGTGGCAAG
TTCGAGGGGGAATTTCAGCGCGAACTAGACCGGCGCAGCATCACGCACGA
GCATACCCCGTCAGACACGCCGCAGTACAACGGGGTGGCCGAACGCGCGC
TTGGACTTTTACGAGGAAAGGCGATCGCCCTGATGGAGGAGTTAGACAAC
ATCATCAACGTGCCGCGAGAGAAGTTGTGGGCCCAGGCAATGCTTTTTGC
ATGTGACGTCACCAACAAGTCAGTCACGACGTCAACGGATGGGGTTAAGT
CTCCGTACGAACTGTGGTTTGGAAAAATTCCTACTGTCGATCATTTGCGA
CCGTTTGGAGCTATGGGATACGTGCGACAGAGCGTACGCGAACACAAGAT
GGCGCCAAAAGGAGAGAAATGCGCATTCATGGGAATTCCACGCAACTTTC
CCACTGGCACCGTTAGCGTGCTACTTATTTTTGTGGACGACTACACCCGT
TTCAGAGTGGTAAAGTTCGTTAAAAGGAAGAGTGGCACAACGGCCGCGCT
TTTGTCTTTGATTGCAGATTATATCACCCCGCAGGAGCTGTCGATCAAGT
ACGTACGGACCAACAATGGTGGCAAGTTCGAGGGGGAATTTCAGCGCGAA
CTAGACCGGCGCAGCATCACGCACGAGCATACCCCGTCAGACACGCCGCA
GTACAACGGGGTGGCCGAACGCGCGCTTGGACTTTTACGAGGAAAGGCGA
TCGCCCTGATGGAGGAGTTAGACAACATCATCAACGTGCCGCGAGAGAAG
TTGTGGGCCCAGGCAATGCTTTTTGCATGTGACGTCACCAACAAGTCAGT
CACGACGTCAACGGATGGGGTTAAGTCTCCGTACGAACTGTGGTTTGGAA
AAATTCCTACTGTCGATCATTTGCGACCGTTTGGAGCTATGGGATACGTG
CGACAGAGCGTACGCGAACACAAGATGGCGCCAAAAGGAGAGAAATGCGC
ATTCATGGGAATTCCACGCAACTTTCCCACTGGCACCGTTAGCGTGCTAC
TTACGCAGGAGGTGTTTTTGAAACACGAGCAAGAGCAGCAACAAAAGGAG
GGTGAAGCGGGATATATATCGGGGTCGGCGGATTTGGAGGGACCGGCCTT
ACCCGCGCTGCGCAAGCTCACCATAGACGGCAATGTCCCGCCCATATTAC
CATCGCGTACGAGGAGTCGAAGACCTCATACCAATGTGGAGGAAGTAGCG
ATGCATTGTTTCTTGCTAGGGATCGAAGAATCCGACGTGGAGGATGCGTT
GGCGTGTGACGACGGGGGGCAGATGGCCATGCACACGACGCTGGATATAC
AGGAACCGAGGAATGGGCGACAGGCGATGGAATCGCCGGAATGGGACGAT
TGGCGGAAAGCAGAGGAAATAGATATGCGTGGAATCGTCGATAAGTGCGT
TTATAAGCAAGTGGCTCGGCCGAAGGATAAACTTGTGGTTGGCAAGAAAA
TGCTCTACAAACGAAAAGTCGGACAGGACGGCAAGGTCGAGAAATACAAG
TGCCGGCTTGTAGCTCAAGGGTCCTGGCAGGTAGAGGGTGTGCACTATAC
GGAGAAATACTCACCCACGCCATCGACCGCATCAATCCGAATGTTTTTGG
CCACAGAAGCGGCCAAGGATGGTGAGCTGCACTATTTCGACGCGGAGCAG
GCATTCCTGGCAGCGGACATTGATGAGGAATTGTACATTGAGATCCCCGA
GGAGTACCGGAAGTTTCCGGGGGCAGTGGGACGACTGAACAAGGCCATTT
ACGGACTCGTACAGGCGGGGAGGTGCTGGAACAACAAGACGCAGGAGGTG
TTTTTGAAACACGAGCAAGAGCAGCAACAAAAGGAGGGTGAAGCGGGATA
TATATCGGGGTCGGCGGATTTGGAGGGACCGGCCTTACCCGCGCTGCGCA
AGCTCACCATAGACGGCAATGTCCCGCCCATATTACCATCGCGTACGAGG
AGTCGAAGACCTCATACCAATGTGGAGGAAGTAGCGATGCATTGTTTCTT
GCTAGGGATCGAAGAATCCGACGTGGAGGATGCGTTGGCGTGTGACGACG
GGGGGCAGATGGCCATGCACACGACGCTGGATATACAGGAACCGAGGAAT
GGGCGACAGGCGATGGAATCGCCGGAATGGGACGATTGGCGGAAAGCAGA
GGAAATAGATATGCGTGGAATCGTCGATAAGTGCGTTTATAAGCAAGTGG
CTCGGCCGAAGGATAAACTTGTGGTTGGCAAGAAAATGCTCTACAAACGA
AAAGTCGGACAGGACGGCAAGGTCGAGAAATACAAGTGCCGGCTTGTAGC
TCAAGGGTCCTGGCAGGTAGAGGGTGTGCACTATACGGAGAAATACTCAC
CCACGCCATCGACCGCATCAATCCGAATGTTTTTGGCCACAGAAGCGGCC
AAGGATGGTGAGCTGCACTATTTCGACGCGGAGCAGGCATTCCTGGCAGC
GGACATTGATGAGGAATTGTACATTGAGATCCCCGAGGAGTACCGGAAGT
TTCCGGGGGCAGTGGGACGACTGAACAAGGCCATTTACGGACTCGTACAG
GCGGGGAGGTGCTGGAACAACAAG
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