mRNA_H-elongata_contig1053.440.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1053.440.1
Unique NamemRNA_H-elongata_contig1053.440.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: D8LMJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ5_ECTSI)

HSP 1 Score: 483 bits (1244), Expect = 3.040e-161
Identity = 265/541 (48.98%), Postives = 317/541 (58.60%), Query Frame = 1 
Query:  433 LSLRDRLAARTAGVAKRVEQAFRTISGSGRSKKLETPLWAKDSCLKRCNCDHGVPMDNTALVRLERKCRSVQHDAVGSVTIRIDPLVGDELEFENRPPLESMPPPPNVLRLFLEYMDASTVARCARTSTEWHQECYALNKEGKPIHPAYAGLHFMELESLFDACEDKIDGLFFQQPPRGDSGQLFTSGQRSVTAWKRLESPVAAHAEESSTYQQGGSLASGDSLS---GKGEMDQRIGASWERVGVAVRDTAPFTKIHPTIKLIICCSSNGSIREWLLAHEVKNIR-FLANMWEHSGYITDVTFAAPSVGYCKTHGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDFHLYTGTSNGRIVVFALGRVCLRPERHRCQLHDEPRWFCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVCTFQQHKRAVTALAVTNAHLFSASDEGHVRIWSLGTLELQRVIGQKWRIKCIWVHHASTESPDAGEGNLFLGLATGSVLVYPITNAV 2043
            L L DRLAAR A +AK    A + ++G GR +  ETP WA+ +C +RCNC+HGVP D+TA V L+   R ++H+AVG VT+R +PL G ELEFENRPPLE  PPPP VLRLFLEYMD+ TVARCA TS EWH+ECY  N+EG P+HPAY G+HFMEL S  DAC+DKIDG+FF QPP G  GQLFT+GQR VTAW+R E+ V    E+S+  +  GS  SG+S      +G+   RI  SW+  GV +RDTAPFT I P        +S       +  H       FLA  W+         F APSVG+CK HGAP HSCYMYSVSDDR LKVWD+A+K CLHTV+P+ISDCGT                                                                                    VWNVPK  FGH +VCTF++HKRA+TAL++T AHLFSASDEGHV             + Q  RIKCIWVHHA  +SPD G G+LFLGLATG VL YPIT+AV
Sbjct:  107 LGLGDRLAARAAAIAKTAGNALQAVTGEGRRR--ETPPWARAACFRRCNCNHGVPTDSTAFVPLQEG-RKLEHEAVGVVTVRTEPLEGAELEFENRPPLERTPPPPYVLRLFLEYMDSRTVARCAHTSKEWHRECYQRNEEGVPMHPAYIGMHFMELGSQVDACQDKIDGMFFHQPPTGSPGQLFTAGQRRVTAWRRQETEVDTEREQSTASEGSGSTKSGESSETSHSEGDAAPRIEVSWQSAGVCLRDTAPFTMILPV-------NSRPRKNPNMAFHSANTSSCFLA--WQ--------AFTAPSVGFCKAHGAPQHSCYMYSVSDDRYLKVWDLATKDCLHTVKPKISDCGT------------------------------------------------------------------------------------VWNVPKASFGHTKVCTFREHKRAITALSLTKAHLFSASDEGHV-------------VRQDRRIKCIWVHHAPPDSPDPGNGSLFLGLATGLVLAYPITDAV 530
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BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: A0A6U4D539_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4D539_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.840e-57
Identity = 147/510 (28.82%), Postives = 239/510 (46.86%), Query Frame = 1 
Query:  532 LETPLWAKDSCLKRCNCDHGVPMDNTAL---VRLERKCRSVQHDAVGSVTIRIDPLVGDELEFENRPPLESMPPPPNVLRLFLEYMDASTVARCARTSTEWHQECYALNKEGKPIHPAYAGLHFMELESLFDACEDKIDGLFFQQPPRGDSGQLFTSGQRSVTAWKRLESPVAAHAEESSTYQQGGSLASGDSLSGKGEMDQRIGASWERVGVAVRDTAPFTKIHPTIKLIICCSSNGSIREWLLAHEVKNIRFLANMWEHSGYITDVTFAAPSVG-----YCKTHGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDFHLYTGTSNGRIVVFALGRVCLRPERHRCQLHDEPRW-FCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVP-KDRFGHKEVCTFQQHKR--AVTALAVTNAHLFSASDEGHVRIWSLGTLELQRVIGQKWRIKCIWVHHASTESPDAGEGNLFLGLATGSVLVY 2025
             +TP WA+ + LKRCNC  GV   ++ +   + L R   S++      + +R++     + EF    P + M P   VL    +Y+ A  +A+ A     W +                   HF++++ L +  E ++     +     + G+L+T+G + V  W  LE                                     ++E +  AVR+TA    I      ++ C+SNGSIR+W L H  KNI ++A  WEH  +I D   + P        +C+         ++YSVSDDR++KVWD   K CL +++P    CGT++SVA S  HLY G+SNG I V+ L R C R +RH C + +     FC Q   +H K  +  + CGG   + K+L++A  +GT +VW++P K  + H+ +     H    A++    T AHLF+A  +  +R+W+L T+ELQ+V+  +   KC++       S       L+ G   G V+++
Sbjct:   95 FKTPKWAEKNELKRCNCLDGVDNGDSRVYYPLNLPRFVTSLE--CPEGIRVRME-----DPEFGWAEPQKVMNPAAEVLDFVFQYVGAKELAKVATVDRLWRERIDMQT-------------HFIDMKQLANDYEHQVHSGRVESCLEFN-GRLYTAGDKRVKVWN-LE-------------------------------------TYECLAEAVRETAVINDIQVVNGALLVCASNGSIRQWSLTHNPKNIAYVAAYWEHRSWINDFIPSEPEPDDDGEMFCR---------FLYSVSDDRTVKVWDANKKVCLFSMDPPNRTCGTMRSVARSARHLYVGSSNGVIYVYPLKRECDREDRHGCSISEHGALPFCLQTELQHGKGIILQLECGGYRRQVKHLYSASTDGTFRVWSLPGKSGYEHECLRVIDAHAPGGALSCFCTTWAHLFTAGQDKVIRVWNLHTMELQKVLHPEELCKCMYAAENEVCS------YLYTGHVDGKVIMW 530
[Close]
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: A0A7S4A686_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A686_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.400e-31
Identity = 95/300 (31.67%), Postives = 145/300 (48.33%), Query Frame = 1 
Query: 1162 AVRDTAPFTKIHPTIKLIICCSSNGSIREWLLAHEVKNIRFLANMWEHSGYITDVTFAA--PSVGYCKTHGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDFHLYTGTSNGRIVVFAL-GRVCLRPERHRCQLHDEPRWFCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVCTFQQHKRAVTALAVTNAHLFSASDEGHVRIWSLGTLE-----LQRVIGQKWRIKCIWVHHASTESPDAGEGNLFLGLATGSVLVYPITN 2037
            ++RDT+    +  T   +  CS NG+IREW L H+V+NI F A MWEH+  + D+T+    P  G   T      SC     SDDRS++VWD  +      + P      T++SV +S  HLY G S+G + V+++ G       R + ++  E  +  E E  K   + V  M           LF    +GT+ VW +PK+   +  +   + H R +  + +T AH  + SD+G +R + L   +     L+RV+    R+KCI   H +   P    G +  GLA G VLVY + N
Sbjct:  519 SIRDTSAIPTLFITGHSLWTCSRNGAIREWSLPHDVRNIEFRAQMWEHNAEVNDLTWTRNNPMFGGSATEHPRLVSC-----SDDRSVRVWDPDTHCSTAVLNPFSHRSATMRSVYVSQEHLYVGGSDGTVYVYSVDGSTRSLRNREKKRVGLELIYPLETE-LKSGDDVVGAMAIAHERTDMSRLFVTSWSGTVYVWKIPKEDLDYVLIHEIRHHTRRINDVLITRAHFLTCSDDGTIRYYGLCHGDQYEKALERVVDCGSRVKCI---HVTPGDP----GVVVAGLADGRVLVYELGN 805
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BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: F0YAL2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAL2_AURAN)

HSP 1 Score: 134 bits (336), Expect = 2.380e-29
Identity = 88/296 (29.73%), Postives = 145/296 (48.99%), Query Frame = 1 
Query: 1162 AVRDTAPFTKIHPTIKLIICCSSNGSIREWLLAHEVKNIRFLANMWEHSGYITDV--TFAAPSVGYCKTHGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDFHLYTGTSNGRIVVFAL-GRVCLRPERHRCQLHDEPRWFCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVCTFQQHKRAVTALAVTNAHLFSASDEGHVRIWSLG-----TLELQRVIGQKWRIKCIWVHHASTESPDAGEGNLFLGLATGSVLVY 2025
            A+RDT    K+      +   S NG+IREW L H + NI F   MWEH+  I D+  T A P+ G     G      Y+ + SDDR+++VW+     C   + P    C T++++ +S  HLY G+S+G + V+A+ G       R + ++  E  +  E E   + +E V  +       +   L+ A  +G ++VW VP+D   ++ V T + H + +T + V++ H  + SD+  +R + L         L+R +    R+KC+    A+   P    G +  GLA G VLV+
Sbjct:  278 AIRDTTVIPKLFTACGSLWSGSHNGAIREWSLPHNLTNIEFRVQMWEHNAVINDIVSTDANPNFG-----GMTQEMPYICTCSDDRTVRVWNPVQHNCDAVIRPFNHHCATMRTLFVSKDHLYVGSSDGVVYVYAVDGSTRSLANRQKKRVGVEATYPLEVE-LSNGEEVVSAIKMSKERTKDARLYVASWDGKLRVWTVPRDDLEYELVFTLEHHGQRITEVLVSHRHFITCSDDETIRYYGLCHGDAYDTALERKVECGSRVKCL---SATPGDP----GVMLAGLADGRVLVF 560
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BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: A0A7S2H458_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H458_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.220e-22
Identity = 79/310 (25.48%), Postives = 133/310 (42.90%), Query Frame = 1 
Query:  769 LEYMDASTVARCARTSTEWHQECYALNKEGKPIHPAYAGLHFMELESLFDACEDKIDGLFFQQPPRGDSGQLFTSGQRSVTAWKRLESPVAAHAEESSTYQQGGSLASGDSLSGKGEMDQRIGASWERVGV--AVRDTAPFTKIHPTIKLIICCSSNGSIREWLLAHEVKNIRFLANMWEHSGYITDVTFAAPSVGYCKTHGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDFHLYTGTSNGRIVVFALGRV-CLRPERHRCQLHDEPRWFCEQESFKHDK-EPVQHMVCGG 1686
            + Y++  ++ R +  S  +  E          + P Y  +    +E  F A E ++ G+   +      G+ +T G + V  WK      +A +EE                             ++RV +   V D  P T        ++  SSNG++R W + H +K +   A MWEH+  + D +           H        +++ SDDR++K WD+   +C HT+EP      T++SVA+SD  L+ G S G I V+      CLR +RH C +   PR +C Q++ +  + + V  +V GG
Sbjct:    1 MPYLNPRSLGRASSVSVVFWSEA--------AVQPHYDDMKRFGVEMKFTAHEKRVKGVVSYR------GRCYTGGDKCVKVWKLQR--ASAESEE-----------------------------FDRVELIHTVHDLCPVTFCQEIDGNLLVGSSNGAVRMWTMPHSIKKMNQRAVMWEHNALVHDAS-----------HWQRGKFSTLFTASDDRTIKAWDLHQVRCEHTLEPLDRRGATMRSVAVSDSFLFVGHSRGVIYVYLTDTSSCLREDRHECYI--SPRPYCLQKTLQDTEGQIVSSIVVGG 252
[Close]
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: A0A175YCM8_DAUCS (Uncharacterized protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YCM8_DAUCS)

HSP 1 Score: 67.8 bits (164), Expect = 2.760e-8
Identity = 63/213 (29.58%), Postives = 94/213 (44.13%), Query Frame = 1 
Query: 1390 MYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDF-HLYTGTSNGRIVVFALGRVCLRPERHRCQLHDEPRWFCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVC-TFQQHKRAVTALAVTNAHLFSASDEGHVRIWS--------LGTLELQRVIGQKWRIKCIWV--HHASTESPDAGEGNLF 1992
            +YSVS DR+LK+W  +  KCL +V     D   + +VA+SD  H+YTG++   I V+              + H E + F      KH K  V  +     G     L     + +I VW   KD +G+ EV    + H ++V  L VTN  L S S +  VR+W         L  LE     G    +KC+ +   H+S  S +    +L+
Sbjct:  205 IYSVSWDRTLKIWRASDFKCLESVRDAHDDA--INAVALSDDGHVYTGSAXXXIXVWK-------------KQHGEKKHFLVATLEKH-KSGVNTLALSSDGS---VLXXXXXDRSIVVWE--KDEYGNMEVAGVLKGHTKSVLCLGVTNDILCSGSADATVRVWKDVDRIYSCLAVLE-----GHGSPVKCLTLASDHSSNHSGNTSSYHLY 391
[Close]
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: A0A835Z1Z8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z8_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.720e-8
Identity = 41/113 (36.28%), Postives = 59/113 (52.21%), Query Frame = 1 
Query: 1726 NGTIKVWNVPKDRFGHKEVCT-----FQQHKRAVTALAVTNAHLFSASDEGHVRIWSLGTLELQRVIGQKWRIKCIWVHHASTESP-----------DAGEGNLFLGLATGSV 2016
            +G++ VW  P+ RFGH+               A+T +AV NAH+ SA D G VRI+S GTL LQRV+    R+K + +   +  +            D G G L+LGL+ G+V
Sbjct:    3 DGSLWVWAAPRRRFGHRGRALRSGGXXXXXGAAITHIAVGNAHVLSADDAGEVRIYSAGTLRLQRVLRAGARVKSVCLRQPAAAATAXXXXXXXRGGDDG-GRLYLGLSDGTV 114
[Close]
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: A0A6U2PBM4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2PBM4_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 3.630e-6
Identity = 66/266 (24.81%), Postives = 109/266 (40.98%), Query Frame = 1 
Query: 1207 KLIICCSSNGSIREWLLAHEVKNIRFLANMWEHSGYITDVTFAAPSVGYCKTHGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQIS-DCGT-LQSVAI--SDFHLYTGTSNGRIVVFALGRV-CLR---PE-----RHRCQLHDEPRWFCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWN-------VPKDRF-GHKEVCTFQQHKRAVTALAVTNAHLFSASDEGHVRIWSLGTLELQRVIGQKWRIKCIW 1941
            K I+    N  IR  L      N   + +   H+G +T + F A             H  +MYS S+D ++K+WD      L T  PQ S DCG+ + SV +  +   L +G +NG + ++ LG   C+    P+     RHRC +                  P+Q++   G     K+L  A   GT+  W+       VPK +F  H ++    + K     ++     L + S +   ++W   T E  +++  K   K +W
Sbjct:   44 KQILAAGGNPHIR--LFEINTPNSNCILSCEGHTGSVTQLGFQA-------------HGRWMYSSSEDNTVKIWD------LRTQHPQRSFDCGSPVNSVCLCPNQMELVSGDANGSVKIWDLGTSKCINSVIPDKAENYRHRCSV------------------PIQNVDVSGAK---KHLIAASSRGTVYAWDPTNSSKLVPKAKFQAHSKLQYLLKAK-----ISPDGKTLVTTSSDTTAKLWDTATWECSKIL--KSHTKWVW 260
[Close]
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: UPI00090149A3 (uncharacterized protein LOC104761001 n=3 Tax=Camelina sativa TaxID=90675 RepID=UPI00090149A3)

HSP 1 Score: 60.5 bits (145), Expect = 6.880e-6
Identity = 58/219 (26.48%), Postives = 95/219 (43.38%), Query Frame = 1 
Query: 1390 MYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDF-HLYTGTSNGRIVVFALGRVCLRPERHRCQLHDEPRWFCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVCTFQQ-HKRAVTALAVTNAHLFSASDEGHVRIWSLGTLE---LQRVIGQKWRIKCIWVHHASTESPDAGEGNLFLGLATGSVLVYPI 2031
            +YSVS DR+LK+W     KCL +      D   + +VA+S+   +YTG+S+ RI V+    V    E+ + + H       E  S       +  +   G  G    L +   +G+I VW   +D  G+  V   ++ H  AV  L V +  L S S +  VR+W     +   L  + G +  +KC+      +  P     +++ G     V V+ I
Sbjct:  183 LYSVSWDRTLKIWRTTDFKCLESFTNAHDDA--INAVALSENGDIYTGSSDQRIKVWRKN-VYEENEKKKKKKHSLVATLLEHNSG------INALALSGNNG--SLLHSGGSDGSILVWE--RDEGGNNGVAGMRRGHTEAVLCLTVVSDILCSGSADKTVRLWKCSATDYSCLAVLEGHRGPVKCLTGAIRDSSKPSETSYHIYSGGLDSQVKVWQI 388
[Close]
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: A0A4D9BSS9_SALSN (Uncharacterized protein n=2 Tax=Salvia TaxID=21880 RepID=A0A4D9BSS9_SALSN)

HSP 1 Score: 57.8 bits (138), Expect = 3.610e-5
Identity = 56/194 (28.87%), Postives = 81/194 (41.75%), Query Frame = 1 
Query: 1390 MYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDFHLYTGTSNGRIVVFALGRVCLRPERHRCQLHDEPRWFCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVCTFQQHKRAVTALAVTNAHLF-SASDEGHVRIW-SLGTLE---LQRVIGQKWRIKCIWVHHAS 1956
            +YSVS DR+LKVW     KCL +V     D   + +VA++D  +YTG+S+GRI V+              +   E  +  +    KH K  V  +   G G                  N         E+   + H +AV  LA    H+  S S +  VR+W  +G      L  + G +  IKCI VH +S
Sbjct:  167 LYSVSWDRTLKVWRTGDFKCLQSVPNAHDDA--INAVAVNDGAVYTGSSDGRIKVWR-------------RKQGEKSYSLDATLAKH-KAGVNALAMSGDGAVLXXXXXXXXXXXXXSEN-------GGEMAVLRGHAKAVLCLAAVADHVICSGSADQTVRVWRGVGKASYACLAILEGHRGPIKCITVHASS 337
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LMJ5_ECTSI3.040e-16148.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U4D539_9STRA1.840e-5728.82Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4A686_9STRA3.400e-3131.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YAL2_AURAN2.380e-2929.73Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2H458_9STRA1.220e-2225.48Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A175YCM8_DAUCS2.760e-829.58Uncharacterized protein n=2 Tax=Daucus carota subs... [more]
A0A835Z1Z8_9STRA4.720e-836.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U2PBM4_9STRA3.630e-624.81Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
UPI00090149A36.880e-626.48uncharacterized protein LOC104761001 n=3 Tax=Camel... [more]
A0A4D9BSS9_SALSN3.610e-528.87Uncharacterized protein n=2 Tax=Salvia TaxID=21880... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1053contigH-elongata_contig1053:7159..15954 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score60.5
Seed ortholog evalue3.6e-06
Seed eggNOG ortholog3885.XP_007155502.1
EggNOG free text desc.WD domain, G-beta repeat
EggNOG OGs37M6I@33090,3GE6R@35493,4JTC6@91835,KOG4155@1,KOG4155@2759
COG Functional cat.S
Best tax levelfabids
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons19
Model size2046
Cds size2046
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929586.0157943-CDS-H-elongata_contig1053:7158..72991622929586.0157943-CDS-H-elongata_contig1053:7158..7299Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 7159..7299 -
1691679080.5449693-CDS-H-elongata_contig1053:7158..72991691679080.5449693-CDS-H-elongata_contig1053:7158..7299Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 7159..7299 -
1622929586.0293322-CDS-H-elongata_contig1053:8005..81701622929586.0293322-CDS-H-elongata_contig1053:8005..8170Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 8006..8170 -
1691679080.5537581-CDS-H-elongata_contig1053:8005..81701691679080.5537581-CDS-H-elongata_contig1053:8005..8170Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 8006..8170 -
1622929586.043755-CDS-H-elongata_contig1053:8976..90811622929586.043755-CDS-H-elongata_contig1053:8976..9081Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 8977..9081 -
1691679080.5614452-CDS-H-elongata_contig1053:8976..90811691679080.5614452-CDS-H-elongata_contig1053:8976..9081Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 8977..9081 -
1622929586.0539289-CDS-H-elongata_contig1053:9506..96531622929586.0539289-CDS-H-elongata_contig1053:9506..9653Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 9507..9653 -
1691679080.5692852-CDS-H-elongata_contig1053:9506..96531691679080.5692852-CDS-H-elongata_contig1053:9506..9653Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 9507..9653 -
1622929586.0698147-CDS-H-elongata_contig1053:10042..101081622929586.0698147-CDS-H-elongata_contig1053:10042..10108Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 10043..10108 -
1691679080.576856-CDS-H-elongata_contig1053:10042..101081691679080.576856-CDS-H-elongata_contig1053:10042..10108Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 10043..10108 -
1622929586.0849292-CDS-H-elongata_contig1053:10422..105181622929586.0849292-CDS-H-elongata_contig1053:10422..10518Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 10423..10518 -
1691679080.5848691-CDS-H-elongata_contig1053:10422..105181691679080.5848691-CDS-H-elongata_contig1053:10422..10518Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 10423..10518 -
1622929586.0983863-CDS-H-elongata_contig1053:11035..111501622929586.0983863-CDS-H-elongata_contig1053:11035..11150Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 11036..11150 -
1691679080.5934224-CDS-H-elongata_contig1053:11035..111501691679080.5934224-CDS-H-elongata_contig1053:11035..11150Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 11036..11150 -
1622929586.1135426-CDS-H-elongata_contig1053:11365..113761622929586.1135426-CDS-H-elongata_contig1053:11365..11376Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 11366..11376 -
1691679080.6095753-CDS-H-elongata_contig1053:11365..113761691679080.6095753-CDS-H-elongata_contig1053:11365..11376Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 11366..11376 -
1622929586.1262147-CDS-H-elongata_contig1053:11425..115501622929586.1262147-CDS-H-elongata_contig1053:11425..11550Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 11426..11550 -
1691679080.6197774-CDS-H-elongata_contig1053:11425..115501691679080.6197774-CDS-H-elongata_contig1053:11425..11550Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 11426..11550 -
1622929586.1525996-CDS-H-elongata_contig1053:11702..117421622929586.1525996-CDS-H-elongata_contig1053:11702..11742Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 11703..11742 -
1691679080.632165-CDS-H-elongata_contig1053:11702..117421691679080.632165-CDS-H-elongata_contig1053:11702..11742Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 11703..11742 -
1622929586.1703856-CDS-H-elongata_contig1053:12209..123111622929586.1703856-CDS-H-elongata_contig1053:12209..12311Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 12210..12311 -
1691679080.6440194-CDS-H-elongata_contig1053:12209..123111691679080.6440194-CDS-H-elongata_contig1053:12209..12311Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 12210..12311 -
1622929586.192027-CDS-H-elongata_contig1053:12533..126421622929586.192027-CDS-H-elongata_contig1053:12533..12642Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 12534..12642 -
1691679080.6526532-CDS-H-elongata_contig1053:12533..126421691679080.6526532-CDS-H-elongata_contig1053:12533..12642Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 12534..12642 -
1622929586.2083337-CDS-H-elongata_contig1053:13029..131021622929586.2083337-CDS-H-elongata_contig1053:13029..13102Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 13030..13102 -
1691679080.6608756-CDS-H-elongata_contig1053:13029..131021691679080.6608756-CDS-H-elongata_contig1053:13029..13102Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 13030..13102 -
1622929586.2234516-CDS-H-elongata_contig1053:13451..135681622929586.2234516-CDS-H-elongata_contig1053:13451..13568Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 13452..13568 -
1691679080.6755388-CDS-H-elongata_contig1053:13451..135681691679080.6755388-CDS-H-elongata_contig1053:13451..13568Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 13452..13568 -
1622929586.2351413-CDS-H-elongata_contig1053:13988..141181622929586.2351413-CDS-H-elongata_contig1053:13988..14118Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 13989..14118 -
1691679080.6873639-CDS-H-elongata_contig1053:13988..141181691679080.6873639-CDS-H-elongata_contig1053:13988..14118Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 13989..14118 -
1622929586.2531986-CDS-H-elongata_contig1053:14426..145101622929586.2531986-CDS-H-elongata_contig1053:14426..14510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 14427..14510 -
1691679080.6981468-CDS-H-elongata_contig1053:14426..145101691679080.6981468-CDS-H-elongata_contig1053:14426..14510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 14427..14510 -
1622929586.2693682-CDS-H-elongata_contig1053:14778..149561622929586.2693682-CDS-H-elongata_contig1053:14778..14956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 14779..14956 -
1691679080.715652-CDS-H-elongata_contig1053:14778..149561691679080.715652-CDS-H-elongata_contig1053:14778..14956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 14779..14956 -
1622929586.2862449-CDS-H-elongata_contig1053:15217..152521622929586.2862449-CDS-H-elongata_contig1053:15217..15252Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 15218..15252 -
1691679080.726463-CDS-H-elongata_contig1053:15217..152521691679080.726463-CDS-H-elongata_contig1053:15217..15252Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 15218..15252 -
1622929586.3001926-CDS-H-elongata_contig1053:15747..159541622929586.3001926-CDS-H-elongata_contig1053:15747..15954Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 15748..15954 -
1691679080.73867-CDS-H-elongata_contig1053:15747..159541691679080.73867-CDS-H-elongata_contig1053:15747..15954Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1053 15748..15954 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1053.440.1prot_H-elongata_contig1053.440.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1053 7159..15954 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1053.440.1

>prot_H-elongata_contig1053.440.1 ID=prot_H-elongata_contig1053.440.1|Name=mRNA_H-elongata_contig1053.440.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=682bp
MTLASSHWRCKHCKRDNANDEEFCDNCLAPRKASDTPRETCRTCLHRHSV
EKPCHVYVINETSWKRKVQKWSKSRRSDEGSLSSGSSASETLSALEQITY
HDSDEDIDSDDQREGEKVEDEESERSKASSVDTEETDKSEKISPLSLRDR
LAARTAGVAKRVEQAFRTISGSGRSKKLETPLWAKDSCLKRCNCDHGVPM
DNTALVRLERKCRSVQHDAVGSVTIRIDPLVGDELEFENRPPLESMPPPP
NVLRLFLEYMDASTVARCARTSTEWHQECYALNKEGKPIHPAYAGLHFME
LESLFDACEDKIDGLFFQQPPRGDSGQLFTSGQRSVTAWKRLESPVAAHA
EESSTYQQGGSLASGDSLSGKGEMDQRIGASWERVGVAVRDTAPFTKIHP
TIKLIICCSSNGSIREWLLAHEVKNIRFLANMWEHSGYITDVTFAAPSVG
YCKTHGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSV
AISDFHLYTGTSNGRIVVFALGRVCLRPERHRCQLHDEPRWFCEQESFKH
DKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVCTFQQH
KRAVTALAVTNAHLFSASDEGHVRIWSLGTLELQRVIGQKWRIKCIWVHH
ASTESPDAGEGNLFLGLATGSVLVYPITNAV*
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mRNA from alignment at H-elongata_contig1053:7159..15954-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1053.440.1 ID=mRNA_H-elongata_contig1053.440.1|Name=mRNA_H-elongata_contig1053.440.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8796bp|location=Sequence derived from alignment at H-elongata_contig1053:7159..15954- (Himanthalia elongata Himel1 dioecious)
ATGACCCTCGCATCTTCGCATTGGCGATGCAAGCACTGCAAGCGTGACAA
CGCTAACGACGAAGAGTTTTGTGACAATTGCCTCGCTCCTCGTAAAGCCA
GCGATACTCCCCGGGAGACATGTAGGACGTGCCTACATCGCCACTCTGTG
GAAAAGCCATGTCATGTGTACGTGATCAATGAAACAAGTTGGAAACGAAA
AGTACAGGTGGGTGATCCTAACCCGCAGCGCAATCTTGTGGCCCTACAAG
CTATGTGTGCTTCAGTTATTCGTGTTCCGCTTATCGTATGTTCGTATTTT
CGTCGGTGAAACGTCCACGCGGCCGGTGCGTTGTGCAACTTTTGAAGGCG
TTTCAGCACATTCGCGAAAACAAAAATTAAGCCGCAAGGAAGCTGTTGCT
GGTGCTGTGATTGTTTAAATGCACCAACGAAAAACATTCTTCGGCGTTGT
GCAGAGCCCGTAGTTTATATATCGCATCCCGCCAATACCTCGAGATAAGA
GCAGGCAAGAGATGTTGCGCCCGCTCACTAGCTACCGCATGACCATCCTA
CTGCATGCATCGGATGAAAGGCGTCGGATGATAAGCTCACTCGATCATGG
ATACGCACAGCTCGGGTGACAGCCTGAGACGACACCGACACACTTATTAC
CTTGGCAGTACATGTTGCGCGCGTTTCAACGCTCGTGCCTTACTTTACGC
AGAAGTGGAGCAAGTCTCGTCGATCAGACGAAGGAAGGTGATATTCGATT
GTTCATCTACTCGAGGCTTCACATTGTGTCACGGTATTGCAAACCTTTCA
TGCGCATTCATAGGTTAGAATAATGTTCATAGGTTTAAAACAAGCAGTAT
CTACGTCGTACGTCGCACGCAAATTTGAGCCGCACTCTTATCACCTAGTC
CTTGGTGCTAGGCCATTAGGTGCCAGGTTTGTCACGCAGTTTGGCTCGCT
TGATTTAATAAAATTATGCCGAGTATTATTCTTTTGATGCGGGCGCAGCT
TGTCGTCAGGATCATCGGCTTCCGAGACATTGTCGGCATTGGAACAAATT
ACATACCACGACAGTGATGAGGACATCGATAGCGACGATCAACGGGAGGG
TGAGAAGGTTGAAGATGAGGAAAGCGAGAGGTCCAAAGCCAGCAGCGTGG
ATACCGAGGAAACCGATAAGAGCGAGGTGTGCGGTAGGGAATTTTGCATT
CAATACTGCTGGATGGCAAGAAGCAAAGAGTGTATTGTCGTGCTTCACGT
ATGAAAACAAAATAATTTGAGTGTTCCTTTCAACATATTATCGCTATCGG
TAAGCAACAAACGTTTCAAACGAAGTTGATCATGCGTGTATTTTGCAGCG
CTGCTTCGCCTATGTGCTGTAGATTTCGCAAAGCCGCTTTTGCTTCCGCC
AGGACAAATCGGGTTACAAGAAAAACAGTAAACAAGCCGGCGAGAAGATA
TCGCCTCTTAGTCTACGCGATAGGCTTGCTGCCAGGACAGCAGGAGTTGC
AAAACGAGTCGAGCAAGCCTTTCGAACGGTGAGCCCGGCGCCTTTTACTA
CGACACAACAGGTGATGACGATCGGGACTGGATCTCGATATCGCGTCACT
TCATATCAAGAGAAACGCTTGAGAAGAGAGCGTGGCATGTTGCAGTCTAA
TTGATCAGCGTACTTGTAGCGCCTTAGTATTCTTGGTTTTCGTTACGTTG
GCTACTTGTGTAAGAATTGCGCCCAGCAGACAGGAAACAAGAAGCAAGCA
ACAAAGCAAGCAAGTGAGCACAGTCACCCCTCAGACTTCTATCGAGTCCT
CCACTCGTGGAAGCCCAACATCACGCCTTCCGGTAGATTTCGGGGAGTGG
ACGGTCCAAGAAGCTCGAAACACCGCTGTGGGCGAAAGATTCATGCCTCA
AGAGATGTAACTGCGACCATGGGGTGCCAATGGACAATACTGCTTTGGTG
CGTCTTGAGAGGAAGTGTGATATGACGAAGCACACCGTTCATGAAGTTAT
CTCGTTGAGGCCTTGTGTAAAGGATCGTACACCCACGAAGCACATGCCTT
GAAAAAGTGTAACACGGATCGGAAAAGGACCTTCTTGCAAAATACGTTTA
CGAGCCAAAACGGAGCAGCTATCGTGTAGAGAACATAGATAGGTAGGGCC
CAATCTAAACACGACCCAAAGATAACTTATCTCGTGCAACAAGCGTTGCC
CATCATGCGTGGTCCAGTACTCCCCCACGTAGGACACAGGCAGGTCCTGA
TTAGCTCAGCCACACGACAATTATCTCCAACAGCACGCCGTCTTGCGCAT
CTGAATGTTTATCCTGTCATATTATAATATCAAGCTTACCTATACTCCCG
CTTTTCTCGCGCTTCATTTTCGATACTTCTAGGCAGGCAGGAGCGTTCAA
CACGACGCGGTGGGATCGGTAACAATTCGGATCGATCCACTCGTAGGAGA
TGAACTCGAATTTGAAAACAGACCACCGCTAGAGTCGATGCCACCTCCTC
CAAGTAAGGAAAGAACCAAGGGCTCAAATTGAGGTGCCAAATGGAAAAAC
TTTCACACAATAATTACGCTTAGCTGTGACCACAAGATAGAATATGTCCA
AGAGTCACTTTCGGATTCCCAGCGCTCGTGAATTAGGCATTGTCCAATCT
AGAAAGCAGTGTATATTAGCTTTCACCCCGCTAGGTACACGACTATGTTT
AGACTCGTACAATTTGCATCCTTGCCTTGCTTATTGTGCACATATATCGC
CGGCGACGCCGTTAAGACGCGTTTTTGTTGTGTATCGCTAACGCGGGGTC
CTCTTTTGTTTTGTTACTAACACGTCCAATCGTCTCGGTCGTGTTGGAAC
AGATGTGCTTCGCTTGTTCCTGGAATATATGGACGCTAGTACGGTTGCTA
GATGCGCTCGTACCTCGACGGAATGGTGAGCATACCTTGAAGCGTTCGGG
GGCGATAGTGACAGGTAAACTTTTTCCATTCACCCTTTCCGTTATTTTCC
CGAGGACGTTGCTTTTTTCATCCATTACTTCTTATTTTACGATGAGTCTC
GAGCTTTTTGCCTTGGTGCGTTTTGGAAGTTTGCGATGATGCAATCGAAC
AGGCGGCGTCGCGTTTCTTCCAAAGTTTTTTACACTGCAGAAAAAGCATT
GAAGTTTTCCTGTCGAATTCGACGAGCCATAACTGTACGCTTACTCATCT
ACCTTCAAAGCGGTTGTGGTCCTACCACCGAGGTGTCGCCAATTGCGTCA
AGTCCGCATCGCTTTCCCGTGATAGATCGTGGGTCCCGGGGGGGGGGGGA
TTTCATTCAAAGGCACCAAGAATGTTACGCGCTCAACAAGGAGGGAAAGC
CGATACATCCAGCTTATGCTGGTCTTCACTTCATGGAACTCGAATCCTTG
TTCGACGCCTGCGAAGACAAGGTACACGATCAATGGAAAACAGTGTCTCT
ATCAAACGTTTAGCGGGGCAGCGGGAGCTGTCCCAATTGTGACCTGTGAT
GAATCGCAGCGAATGCTTAAGGCATTCTCTGCGACGGATTTATTTCGATA
CGTAGGGTTGGACACGCCAACGTTGAGCGAGCTGTGGTGGTCATATTCAG
TCGGTGCATGACATCGCGTTTCTTATTTCGTTCGCTGGTCTAGATCGATG
GGCTGTTCTTTCAACAGCCACCACGGGGTGACAGTGGTCAGCTCTTCACG
TCAGGCCAGAGATCCGTCACCGCGTGGAAGCGGCTGGAATCCCCGGTAAT
GGGGCACTATGCACTGGGCTTTGTGTTGAAACATTTTGCTGGGGCTCCCA
ACTATATTCTACCTAAGAACACACGCGGAGGGGCAGTCAAGCAAAATTGA
AGAATAGTTCCGGGTACGATACACACATACATTCTGAAATATTTTCGCAG
CAAGTTCCGGGAACTATTATTATTCTGGAACATTTTTGTCTCGTACAGCA
AAGCACTTTTTCCCGTTAAGCGATGGAGGTCAGTGATATTTCGGGGCATG
ATCGCGCTTGTATCATCATAACGCCTCAAAAGGACCATAAAAAATGTATC
TGCAGGCGAGGCCTGTCCTTCACGCACTTGACCCCTTTCAATGATTCCCC
ACAACAAGGCCGTGGAATAAAATGGCATCGATACTATCTGTATATGCTTT
CCATCCTCTGAAAATTATCCCTGATCCCTTCGACGCGTGTGCGTGCTCGC
TTTCATCCGAAGGTAGCTGCACACGCCGAGGAATCTTCAACATATCAACA
AGGTATCAGTGCTGCAGCTGGAGCTTGCTACACGCCGTCTCCATCCATTT
ACCCTCTCTGTTCGATGGTCTGTCCCATTTGCTCTCCACCGGCGGAAGTT
AGGCAAGCTTTCCATTAGTTCATTCAATCGTTTTTTATAACATCTATTAT
TAAGGTGGATCGCTGGCGAGCGGCGATTCTTTGTCAGGAAAGGGGGAAAT
GGATCAAAGGATAGGTGCTTCTTGGGAGAGGGTCGGTGTCGCCGTGCGCG
ACACTGCGCCTTTCACAAAGATCCACCCGGTGAACAACAGGCAAGGCTAC
ATATTCTTACAAGTACGCAACCGATGAGACGATTAAGCTGTAGTATCGAT
TCAGAAGGGACCTTGTTTGTGTTCAGGTCTTTCTCGCCTGCTTGGAGATG
CCTGTGCATTTTTAAAACAATCGCCCGGCTTCGATTGCCGCGATAATTTA
CAAGCTTTGATTAATGGAAACTTTGCTTGTGTGGCTGACCGAGGCGTATT
TCTCCTCGCTCCATCTTCCCGCTTTGGTTGCAAAATGCTTTGGCACCTAC
ATAGCATCATATGCTGCTCCTCAAACGGATCTATTCGAGAGTGGTTGCTG
GCGCATGAAGTGAAAAATATCCGCTTCTTGGCGAATATGTGGGAGCACAG
CGGCTACATTACTGATGTCGTGAGCATCACCCAAGTTCCTGCCACCGCTT
CGTGGAATAGTTCAATTATGCTTGCTTGTTCAATCCTGGACTTAAATTTC
GCGCAGATTGGTCTGGTATAAAACGTTGGGAGGACGTCTCAATTTAGATA
CAGTATCCATGCATTCGGTTATATATCCATGCATTCAAAAGTTATTCGGC
AGTCGTAAGGCTGACGAGTACAATTTTTGCCCGGATAGGTGTAGCCCTTG
ACCTTTGGAGTCAACTATTAGGTATATACAGAGAAGCAGGCAGTATAATC
ATATCATATCGCCTATACCCAATGTCAAGCGCAGAGTCGAGTTATAGGTA
TTGTACAGTCTTCCCAGACGGGGCTAGAACTCGAAGTTGCCAGGATTTCA
TTCTTCTATATTGCCAATCATTTAAGGGCGCGTATCGATATGATTGAGAG
AAATATACATCCGTACTTGGTGAGTTAGGGAAGCACGTTCCTTCTGTCTT
CTCTCGAAACCACCACATGCATGGCCCTCGGTACAGACCTTTGCAGCACC
GTCTGTGGGCTACTGCAAGACTCACGGCGCGCCAGCGCACTCCTGCTACA
TGTATTCGGTCTCTGATGACCGAAGTCTTAAGGTATGTCTGGAGCGCCGT
GATATCCTCGTACAGTGATATTATGTACTCTACAAAAACGGTAAAACGGT
CTTGGTAGAGATCTGTGTGGCTATTCGCCGGGAGTCCCGCCGGGTGAGTA
TAGCCATAGTCGTTTCCGGTATCACTTGTACTGTAAGTTTACCGAAAATC
GGCTTCCACGGGAAACGCTATCACGTGGCGTCGTCATCCCGTTGAGCGCC
GCCCAAGTCTTTTCGAGGCCAACGAAAGAAGCAGCACAACGGCACGCAGA
TTCAAGGCCACCTTAATATCCAACTCTCGGTTTCGTTGCACGATAGGTTT
GGGACATGGCCTCAAAAAAATGTCTACACACGGTAGAGCCGCAAATATCG
GACTGTGGGACGGTAAGCTCCCTTCTCTCTCTCTTTATTTCTCTCCTTGC
CGTTTCACCCTACGGCACCCATACCTTAGCTTTGATTACGGCGACGGTTA
AGCAACGATTGATACCTTCTAGTTCGGCAAAGTATTTCGGAACGCTTGTG
AGTTTCAGTGAGAAGCTTTGCCACCGCCGGCATTTCCGGGCTTTGCGCAG
CGTTGCGCTTTGGCTCTATACATGTGTAGTTTTTCGTAAGTCCGAGCAAA
ATCGATCCCGGGAGAGTCGCTAGGAGGTACTTTGGTTTGTTGACACTTCA
AGAACTACACTATGATCAAGTGAACAGCAGCATCACACCTAAATTGGTTC
GACGCTTGCTGCGTTGCTGCTCCGTATCATACTGAACAACGACGGTGGAA
GTTGCAATCTGTGGCGATTTCGGATTTCCACCTATACACCGGCACGAGCA
ACGGCCGCATCGTTGTCTTCGCCCTCGGGCGTGTATGCCTGAGGCCCGAA
CGGCACAGGTGCCAGCTCCATGATGAACCGAGATGGTTCTGCGAGCAGGT
GCGTACCTGGATGGCGGCATGGTGAAGTCGGGTGCTGCCGGAAGTATGAT
ATCGCCCGTTGTACATCGAGCAATACGACCGCTCTCGGTGTACGAGCTGA
TTTCCAAGAATAGTTCCGCACGAATCTCGTGACAGCAGCACCACCTTAAG
ACGCACGATGTCGCGTCGAGCCAATATCGTTGAGTATTGTTGTAAACCAT
GGTATCTTGCGTTCCTTTTGAATCATGTGCATCTCTCTCAACCCCTGGAA
GAACATTTCTCGTACTGTATCAAGAGCGCTGTCGGAGTTTATAGTTTTCA
TACCCAGGGCAGGCGAAACTGACCGAAGGGTACTAGTGAGGATGTATGGT
ATTTCGTAGGAAAGTTATAGCTGACGGGGCAACTGGTCAAAGTACTAGTG
GTCCTCATTAAATTTGACTGCAGGAGAGCTTTAAGCACGATAAGGAGCCA
GTCCAGCACATGGTCTGCGGAGGGCCGGGAGGAAGGTACAAGTACTTGTT
CACAGCCGTAAGAAACGGCACGATCAAGGTGAGAAGTGCGATTTGGCAAA
ACTAGTTCTCCCCCGCAAAATGTCCGGGCTTTTCACCGATCAGTTAGAGA
GGATCGTCGACGTCTCCACCGCCAATTGCATCCGCATTGGCGGAGGACCC
GTCCCATTTGGATCTACGACGCTATCCCAAACCATACGTATAATAGTACA
ACGGTTTGGCAGTGCTCGTCATCGGAACCCGTACCACAACATAATCAATC
TCCGCATCATCCTGACGCATCCCCAAGGTGACTAATAACGATGGTATAAG
ATAAATGAATGCCGTGGGACAGAAATTCCCCCGCCCCCTATTTTCTCAGC
TAGAGTTATGCGGGTGGTGGCATCATAAGCCTCGGTTTCGGAACAATCTC
GGCAACTAATTAGGAAAATAAAAAGGCAACAAAGCAACCTTCACACACTT
TGGATCTGGAAAATAAACGAGGTCTTCTGAAGATTACTGGGGGGGGGTAT
GTATATGCACCGACAAGCTATGAAACTCGATCTGCTTTTTTACATACTAA
ATTCAATCTAAAAGTTGAAGTCCAGTTCCGGAAGGGTTAACGTTGTCGAG
ATCACCGAGAAAAGCAGTAGGTACGAGATGGCGGTCCCCGGCGCGTGTAA
ACTGCTACTACCCTTCCTACGATCACCTTCGACACGACATCTCTACTGAA
ACAGTCGCGTAAAGTCGGGAGTGGGACCATCGACGGCTACAGACGGTACA
TAATTCATCTGACAGCCATAACTATTGCTAAGAGGATATTTTCTCCTCCG
CTTATCGCGTCTCTCCCTTTTTTTGTTCTCGAAGGTCTGGAACGTTCCAA
AAGACAGATTTGGCCACAAAGAAGTGTGCACGTTCCAGCAACACAAGCGG
GCGGTTACTGCGCTCGCGGTCACGAATGCGCACCTTTTCTCCGCCTCGGA
CGAGGGACACGTCAGGATCTGGAGCCTGGGGACCCTCGAATTGCAGCGGG
TACGATGCTCCATCCTATACCCCGGACATGGCAATCCACCCCCATATTTT
TCGACCAGACGGGCAACACCGAAAGTCGGAAAATCTTGTCAAAAGATCTC
TGTAAGATCGTGACAGATCCATAGCAGGCGGCGACTCTGGCGACCTGCGT
AGTTGTCGAGAAAATCGAGCGAGCATACACACACGCCCTCTGGAGGGCGT
AGTCCTCCTCCTTCACCTCGGGTGCTCGTTCGTAAAATCAGCTTCAGTTA
ACCTCAACCTTTTATTTTCGGTCGTAACGATGGTTGATGGTTGATTGTTT
ATTCGTCTTTCACCAAAAATCGTGATGGCTCAAAATTACTGAACTGATTG
AACTCCCAAATTTCAATTTCGTTAAAAATGCAAATACAGTGTAGGCTACC
CGGAACATCATCATATACTAAAACGCCCCTTGCGACTTGCTTGTTTACGG
AATAGTGCGCGGTTTCTCACAACCGCTTTCCCCTCTTCACCTCACAATTC
TAGGACATAACACCGTCATGAACCAAACTCGGGTAAGACCGCTCGAAAAA
CTGCCTTGTAGATCAACAGGGAGCCAAGAGCACGTTGGCACCCTATGAGC
AGTTAAATCACCAAACCGTGTACATGAGGCTAGCTGGGCTGGAAGCCGCA
GGGCGTACGTCGAGAAACACGCCCTTCGCCCACCCCGTCTCCTTCGCTTC
AACAGGTTATAGGGCAAAAGTGGCGAATCAAGTGCATCTGGGTGCACCAC
GCCTCAACGGAGTCGCCAGACGCGGGCGAGGGAAACTTGTTTCTCGGCCT
GGCCACGGGTTCGGTATTGGTCTATCCTATCACGAACGCTGTTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig1053:7159..15954-

>mRNA_H-elongata_contig1053.440.1 ID=mRNA_H-elongata_contig1053.440.1|Name=mRNA_H-elongata_contig1053.440.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4092bp|location=Sequence derived from alignment at H-elongata_contig1053:7159..15954- (Himanthalia elongata Himel1 dioecious)
ATGACCCTCGCATCTTCGCATTGGCGATGCAAGCACTGCAAGCGTGACAA
CGCTAACGACGAAGAGTTTTGTGACAATTGCCTCGCTCCTCGTAAAGCCA
GCGATACTCCCCGGGAGACATGTAGGACGTGCCTACATCGCCACTCTGTG
GAAAAGCCATGTCATGTGTACGTGATCAATGAAACAAGTTGGAAACGAAA
AGTACAGATGACCCTCGCATCTTCGCATTGGCGATGCAAGCACTGCAAGC
GTGACAACGCTAACGACGAAGAGTTTTGTGACAATTGCCTCGCTCCTCGT
AAAGCCAGCGATACTCCCCGGGAGACATGTAGGACGTGCCTACATCGCCA
CTCTGTGGAAAAGCCATGTCATGTGTACGTGATCAATGAAACAAGTTGGA
AACGAAAAGTACAGAAGTGGAGCAAGTCTCGTCGATCAGACGAAGGAAGA
AGTGGAGCAAGTCTCGTCGATCAGACGAAGGAAGCTTGTCGTCAGGATCA
TCGGCTTCCGAGACATTGTCGGCATTGGAACAAATTACATACCACGACAG
TGATGAGGACATCGATAGCGACGATCAACGGGAGGGTGAGAAGGTTGAAG
ATGAGGAAAGCGAGAGGTCCAAAGCCAGCAGCGTGGATACCGAGGAAACC
GATAAGAGCGAGCTTGTCGTCAGGATCATCGGCTTCCGAGACATTGTCGG
CATTGGAACAAATTACATACCACGACAGTGATGAGGACATCGATAGCGAC
GATCAACGGGAGGGTGAGAAGGTTGAAGATGAGGAAAGCGAGAGGTCCAA
AGCCAGCAGCGTGGATACCGAGGAAACCGATAAGAGCGAGAAGATATCGC
CTCTTAGTCTACGCGATAGGCTTGCTGCCAGGACAGCAGGAGTTGCAAAA
CGAGTCGAGCAAGCCTTTCGAACGAAGATATCGCCTCTTAGTCTACGCGA
TAGGCTTGCTGCCAGGACAGCAGGAGTTGCAAAACGAGTCGAGCAAGCCT
TTCGAACGATTTCGGGGAGTGGACGGTCCAAGAAGCTCGAAACACCGCTG
TGGGCGAAAGATTCATGCCTCAAGAGATGTAACTGCGACCATGGGGTGCC
AATGGACAATACTGCTTTGGTGCGTCTTGAGAGGAAGTATTTCGGGGAGT
GGACGGTCCAAGAAGCTCGAAACACCGCTGTGGGCGAAAGATTCATGCCT
CAAGAGATGTAACTGCGACCATGGGGTGCCAATGGACAATACTGCTTTGG
TGCGTCTTGAGAGGAAGTGCAGGAGCGTTCAACACGACGCGGTGGGATCG
GTAACAATTCGGATCGATCCACTCGTAGGAGATGAACTCGAATTTGAAAA
CAGACCACCGCTAGAGTCGATGCCACCTCCTCCAAGCAGGAGCGTTCAAC
ACGACGCGGTGGGATCGGTAACAATTCGGATCGATCCACTCGTAGGAGAT
GAACTCGAATTTGAAAACAGACCACCGCTAGAGTCGATGCCACCTCCTCC
AAATGTGCTTCGCTTGTTCCTGGAATATATGGACGCTAGTACGGTTGCTA
GATGCGCTCGTACCTCGACGGAATGATGTGCTTCGCTTGTTCCTGGAATA
TATGGACGCTAGTACGGTTGCTAGATGCGCTCGTACCTCGACGGAATGGC
ACCAAGAATGTTACGCGCTCAACAAGGAGGGAAAGCCGATACATCCAGCT
TATGCTGGTCTTCACTTCATGGAACTCGAATCCTTGTTCGACGCCTGCGA
AGACAAGGCACCAAGAATGTTACGCGCTCAACAAGGAGGGAAAGCCGATA
CATCCAGCTTATGCTGGTCTTCACTTCATGGAACTCGAATCCTTGTTCGA
CGCCTGCGAAGACAAGATCGATGGGCTGTTCTTTCAACAGCCACCACGGG
GTGACAGTGGTCAGCTCTTCACGTCAGGCCAGAGATCCGTCACCGCGTGG
AAGCGGCTGGAATCCCCGATCGATGGGCTGTTCTTTCAACAGCCACCACG
GGGTGACAGTGGTCAGCTCTTCACGTCAGGCCAGAGATCCGTCACCGCGT
GGAAGCGGCTGGAATCCCCGGTAGCTGCACACGCCGAGGAATCTTCAACA
TATCAACAAGGTAGCTGCACACGCCGAGGAATCTTCAACATATCAACAAG
GTGGATCGCTGGCGAGCGGCGATTCTTTGTCAGGAAAGGGGGAAATGGAT
CAAAGGATAGGTGCTTCTTGGGAGAGGGTCGGTGTCGCCGTGCGCGACAC
TGCGCCTTTCACAAAGATCCACCCGGTGGATCGCTGGCGAGCGGCGATTC
TTTGTCAGGAAAGGGGGAAATGGATCAAAGGATAGGTGCTTCTTGGGAGA
GGGTCGGTGTCGCCGTGCGCGACACTGCGCCTTTCACAAAGATCCACCCG
ACGATTAAGCTACGATTAAGCTCATCATATGCTGCTCCTCAAACGGATCT
ATTCGAGAGTGGTTGCTGGCGCATGAAGTGAAAAATATCCGCTTCTTGGC
GAATATGTGGGAGCACAGCGGCTACATTACTGATGTCCATCATATGCTGC
TCCTCAAACGGATCTATTCGAGAGTGGTTGCTGGCGCATGAAGTGAAAAA
TATCCGCTTCTTGGCGAATATGTGGGAGCACAGCGGCTACATTACTGATG
TCACCTTTGCAGCACCGTCTGTGGGCTACTGCAAGACTCACGGCGCGCCA
GCGCACTCCTGCTACATGTATTCGGTCTCTGATGACCGAAGTCTTAAGAC
CTTTGCAGCACCGTCTGTGGGCTACTGCAAGACTCACGGCGCGCCAGCGC
ACTCCTGCTACATGTATTCGGTCTCTGATGACCGAAGTCTTAAGGTTTGG
GACATGGCCTCAAAAAAATGTCTACACACGGTAGAGCCGCAAATATCGGA
CTGTGGGACGGTTTGGGACATGGCCTCAAAAAAATGTCTACACACGGTAG
AGCCGCAAATATCGGACTGTGGGACGTTGCAATCTGTGGCGATTTCGGAT
TTCCACCTATACACCGGCACGAGCAACGGCCGCATCGTTGTCTTCGCCCT
CGGGCGTGTATGCCTGAGGCCCGAACGGCACAGGTGCCAGCTCCATGATG
AACCGAGATGGTTCTGCGAGCAGTTGCAATCTGTGGCGATTTCGGATTTC
CACCTATACACCGGCACGAGCAACGGCCGCATCGTTGTCTTCGCCCTCGG
GCGTGTATGCCTGAGGCCCGAACGGCACAGGTGCCAGCTCCATGATGAAC
CGAGATGGTTCTGCGAGCAGGAGAGCTTTAAGCACGATAAGGAGCCAGTC
CAGCACATGGTCTGCGGAGGGCCGGGAGGAAGGTACAAGTACTTGTTCAC
AGCCGTAAGAAACGGCACGATCAAGGAGAGCTTTAAGCACGATAAGGAGC
CAGTCCAGCACATGGTCTGCGGAGGGCCGGGAGGAAGGTACAAGTACTTG
TTCACAGCCGTAAGAAACGGCACGATCAAGGTCTGGAACGTTCCAAAAGA
CAGATTTGGCCACAAAGAAGTGTGCACGTTCCAGCAACACAAGCGGGCGG
TTACTGCGCTCGCGGTCACGAATGCGCACCTTTTCTCCGCCTCGGACGAG
GGACACGTCAGGATCTGGAGCCTGGGGACCCTCGAATTGCAGCGGGTCTG
GAACGTTCCAAAAGACAGATTTGGCCACAAAGAAGTGTGCACGTTCCAGC
AACACAAGCGGGCGGTTACTGCGCTCGCGGTCACGAATGCGCACCTTTTC
TCCGCCTCGGACGAGGGACACGTCAGGATCTGGAGCCTGGGGACCCTCGA
ATTGCAGCGGGTTATAGGGCAAAAGTGGCGAATCAAGTGCATCTGGGTGC
ACCACGCCTCAACGGAGTCGCCAGACGCGGGCGAGGGAAACTTGTTTCTC
GGCCTGGCCACGGGTTCGGTATTGGTCTATCCTATCACGAACGCTGTTTG
AGTTATAGGGCAAAAGTGGCGAATCAAGTGCATCTGGGTGCACCACGCCT
CAACGGAGTCGCCAGACGCGGGCGAGGGAAACTTGTTTCTCGGCCTGGCC
ACGGGTTCGGTATTGGTCTATCCTATCACGAACGCTGTTTGA
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