mRNA_H-elongata_contig10529.438.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10529.438.1 vs. uniprot
Match: D7FJA1_ECTSI (Putative Leucine Rich Repeat Protein Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJA1_ECTSI) HSP 1 Score: 392 bits (1006), Expect = 5.540e-131 Identity = 197/314 (62.74%), Postives = 232/314 (73.89%), Query Frame = 1
Query: 106 RLAVNPDLAMVPESFAFAERLSWVSLGGTAWCARAAERRRRFPFSVIPREEVVLGEKLGSGASGDVYAAIYNGQNVAVKVFKSDVSPDGNARDELDVACAVDHPNLTKAIGIVRANRSDGGDGDHGVTNSDCR------------------------------INRKQWLVMEKVEGQPLAEKPDLTSVLRCRWEAGRRFESVLVLAVLLQVARAMSYLHEKNICHGDLYAHNVLVDGETGASVLCDFGASFFYQNLSERHDPNGFALEGAEVRAFGIMARDMACRSVGCEWILQDLAPSCIQADTFLRPSFHE 957
RLAVNP L +VPE +AE+L+WVSL G+AWCARA+E+RRR F IPREEVVLGE+LGSGASG+V+A +Y G++VAVKVFK+D+ PDGNARDELDVA VDHPNLTK++G+V A+ + + S+ I +WLVME+V G+PLAEKPD +SVLRCRW +GRRFE VLVLAVLLQVARAMSYLHEK ICHGDLYAHNVLVDGETGA+VLCDFGASFFY +HD + LEG EVRAFG+M++DMACRS GCEWILQDL PSC+Q+D RPSFHE
Sbjct: 187 RLAVNPGLTVVPEGLTYAEKLAWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAGVYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVHASSTKPSGRSSSGSESEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKAICHGDLYAHNVLVDGETGAAVLCDFGASFFYPT-DRQHDCS--MLEGTEVRAFGLMSKDMACRSAGCEWILQDLVPSCLQSDASHRPSFHE 497
BLAST of mRNA_H-elongata_contig10529.438.1 vs. uniprot
Match: A0A6H5L0B3_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B3_9PHAE) HSP 1 Score: 337 bits (865), Expect = 4.030e-110 Identity = 171/262 (65.27%), Postives = 197/262 (75.19%), Query Frame = 1
Query: 235 FSVIPREEVVLGEKLGSGASGDVYAAIYNGQNVAVKVFKSDVSPDGNARDELDVACAVDHPNLTKAIGIVRANRSDGGDGDHGVTNSDC---------------------RINRKQWLVMEKVEGQPLAEKPDLTSVLRCRWEAGRRFESVLVLAVLLQVARAMSYLHEKNICHGDLYAHNVLVDGETGASVLCDFGASFFYQNLSERHDPNGFALEGAEVRAFGIMARDMACRSVGCEWILQDLAPSCIQADTFLRPSFHE 957
F IPREEVVLGE+LGSGASG+V+A +Y G++VAVKVFK+D+ PDGNARDELDVA VDHPNLTK++G+V A+ G + S+ I +WLVME+V G+PLAEKPD +SVLRCRW +GRRFE VLVLAVLLQVARAMSYLHEK ICHGDLYAHNVLVDGETGA+VLCDFGASFFY +HD + LEG EVRAFG+M+RDMACRS GCEWILQDL PSC+Q+D RPSFHE
Sbjct: 35 FPDIPREEVVLGERLGSGASGEVFAGVYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVHASSIKPSGGSISRSESEVAAXXXXXXXXXXXXXXXXXGDEIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKAICHGDLYAHNVLVDGETGAAVLCDFGASFFYPT-DRQHDCS--MLEGTEVRAFGLMSRDMACRSAGCEWILQDLVPSCLQSDASHRPSFHE 293
BLAST of mRNA_H-elongata_contig10529.438.1 vs. uniprot
Match: A0A5J4XR07_9CHLO (Kinase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XR07_9CHLO) HSP 1 Score: 196 bits (499), Expect = 1.540e-55 Identity = 119/275 (43.27%), Postives = 158/275 (57.45%), Query Frame = 1
Query: 166 LSWVSLGGTAWCARAAERRRRFPFSVIPR--EEVVLGEKLGSGASGDVYAAIYNGQNVAVKVFKSDVSPDGNARDELDVACAVDHPNLTKAIGIVRANRSDGGDGDHGVTNSDCRINRKQWLVMEKVEGQPLAEKPDLTSVLRCRWEAGRRFESVLVLAVLLQVARAMSYLHEKNICHGDLYAHNVLVDGETGASVLCDFGASFFYQNLSERHDPNGFALEGAEVRAFGIMARDMACR----SVGCEW----ILQDLAPSCI--QADTFLRPSFH 954
L+W+SL G C A R ++P ++ + LG GASGDV+AA + ++VA+K+FK++ SPDG+ARDE+ V C VDHPNL K IGI+ D H LV+E++ G PLA KP+ S+LRCRW G+ F + V V VA A+SYLH+ NICHGD+Y HNVL D E G SVLCD+GASFFYQ S + E EVRA+G++ D+ R S C+ ILQ++ CI A T RP+F+
Sbjct: 231 LAWLSLAGNPACQPAPPIRP----DILPLTLSQLDIATALGDGASGDVFAAKFQERDVAIKIFKAESSPDGHARDEIAVTCFVDHPNLIKVIGII--------DHPHA-------------LVLERIWGVPLALKPNFESLLRCRWTPGQTFTAAFVWNVAKSVANALSYLHKHNICHGDVYGHNVLAD-EEGNSVLCDYGASFFYQAGSVPY-------EAQEVRAYGLLLHDLVSRLKQASEQCDKDAARILQEIVQQCIGNTASTTQRPTFY 472
BLAST of mRNA_H-elongata_contig10529.438.1 vs. uniprot
Match: A0A8J9S5V3_9CHLO (Probable leucine-rich repeat-containing protein 7 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S5V3_9CHLO) HSP 1 Score: 190 bits (483), Expect = 3.840e-53 Identity = 112/268 (41.79%), Postives = 145/268 (54.10%), Query Frame = 1
Query: 166 LSWVSLGGTAWCARAAERRRRFPFSVIPREEVVLGEKLGSGASGDVYAAIYNGQNVAVKVFKSDVSPDGNARDELDVACAVDHPNLTKAIGIVRANRSDGGDGDHGVTNSDCRINRKQWLVMEKVEGQPLAEKPDLTSVLRCRWEAGRRFESVLVLAVLLQVARAMSYLHEKNICHGDLYAHNVLVDGETGASVLCDFGASFFYQNLSERHDPNGFALEGAEVRAFGIMARDMACRSVGCEWI------LQDLAPSCIQADTFLRPSF 951
L+W+SL G C R + + E + LG LG GASGDV+AA G+ VAVKVFK +VSPDG A DE+ V C V+HP+LT+ + ++ + LV+++V G+PLA KP+L S+LRCRW F S V V L VA A+ YLH ICHGD+YAHN+LVD E G + L D+GASFFY+ P E EVRAFG+ DM R G + L+D+A + D RPSF
Sbjct: 219 LAWMSLAGNPACPPPPVRGH---IADVTIEHLSLGVPLGEGASGDVFAAHMEGEEVAVKVFKGEVSPDGKAADEIAVTCYVNHPHLTRVLATLQ---------------------QPHALVLKRVAGRPLAAKPNLQSLLRCRWPPDAAFSSAFVARVALCVASALQYLHAHCICHGDVYAHNILVDNE-GHATLLDYGASFFYK-------PGTLPYEAQEVRAFGLFLSDMLARVEGADKASSVRAGLEDIAAGALHKDPLGRPSF 454
BLAST of mRNA_H-elongata_contig10529.438.1 vs. uniprot
Match: A0A7S1CVX0_9CHLO (Hypothetical protein n=1 Tax=Picochlorum oklahomense TaxID=249345 RepID=A0A7S1CVX0_9CHLO) HSP 1 Score: 188 bits (477), Expect = 1.380e-51 Identity = 118/319 (36.99%), Postives = 172/319 (53.92%), Query Frame = 1
Query: 28 KLQMSFN-NLRSLPMGMEGMRSLELFRRLAVNPDLAMVPESFAFAERLSWVSLGGTAWCARAAERRRRFPFSVIPREEVVLGEKLGSGASGDVYAAIYNGQNVAVKVFKSDVSPDGNARDELDVACAVDHPNLTKAIGIVRANRSDGGDGDHGVTNSDCRINRKQWLVMEKVEGQPLAEKPDLTSVLRCRWEAGRRFESVLVLAVLLQVARAMSYLHEKNICHGDLYAHNVLVDGETGASVLCDFGASFFYQNLSERHDPNGFALEGAEVRAFGIMARDMACR----------SVGCEWILQDLAPSCIQADTFLRPSF 951
K+Q+S N L+ LP + + LELFR A DL +PES A LSW+S+ G A ++ + ++V++G+KLG GASG+V+ Y + VAVK+F+ D SPDG+ DE+ +AC + NL + + DH +VME VEG PLA KP+ SVLRCRW+ G+ F VL L V+ A+ ++H K I HGD+YAHNVL + G S+LCD+GA+F YQ +++H E +VRAFG++ RD+ R ++ C+ L ++ C+ D RP+F
Sbjct: 232 KIQLSHNATLKHLPENIGQLSRLELFR--AACCDLQHIPESLMNAHSLSWLSIAGNP----LAGSLKKPSAPCVSIDDVMVGKKLGDGASGEVFEGEYKKKQVAVKLFRKDTSPDGHCEDEIAIACMLHDDNLVNVLARI----------DHPHLG----------VVMEYVEGSPLALKPNKDSVLRCRWKEGQLFPISFVLRCLSSVSGALEHMHAKGIAHGDVYAHNVLARDD-GTSILCDYGAAFAYQRSNKQHG----LFELHDVRAFGLLVRDLIERVDISFADMETAIDCQKQLLIISQQCLAVDPHKRPTF 519
BLAST of mRNA_H-elongata_contig10529.438.1 vs. uniprot
Match: I0Z463_COCSC (L domain-like protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z463_COCSC) HSP 1 Score: 177 bits (449), Expect = 1.020e-48 Identity = 109/267 (40.82%), Postives = 138/267 (51.69%), Query Frame = 1
Query: 169 SWVSLGGTAWCARAAERRRRFPFSVIPREEVVLGEKLGSGASGDVYAAIYNGQNVAVKVFKSDVSPDGNARDELDVACAVDHPNLTKAIGIVRANRSDGGDGDHGVTNSDCRINRKQWLVMEKVEGQPLAEKPDLTSVLRCRWEAGRRFESVLVLAVLLQVARAMSYLHEKNICHGDLYAHNVLVDGETGASVLCDFGASFFYQNLSERHDPNGFALEGAEVRAFGIMARDMACR------SVGCEWILQDLAPSCIQADTFLRPSF 951
+W+SL G C + R + FP I +++ LG LG GASGDVYAA ++VAVKVFK +VSPDG A DE+ V C VDHP+LT+ +V+GQPLA KP+L S+LRCRW G F V V L VA A+ YLH ICHGD+YAHN+LV + G + L D+GASFFY+ P E EVRAFG+ DM R L+++ +Q D RPSF
Sbjct: 189 AWMSLAGNPICPQTPVRGQ-FPAMTI--DQLSLGVSLGEGASGDVYAAKLGAEDVAVKVFKGEVSPDGRAADEIAVTCYVDHPHLTR-----------------------------------RVQGQPLAGKPNLQSLLRCRWPPGSAFSPGFVARVALCVASALQYLHAHCICHGDVYAHNILVAAD-GHATLLDYGASFFYK-------PGTLPYEAQEVRAFGLFLNDMLARLEAPDKPSAVRSSLEEITADALQRDPSCRPSF 409
BLAST of mRNA_H-elongata_contig10529.438.1 vs. uniprot
Match: A0A836C659_9CHLO (Protein kinase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C659_9CHLO) HSP 1 Score: 176 bits (445), Expect = 2.870e-47 Identity = 103/274 (37.59%), Postives = 143/274 (52.19%), Query Frame = 1
Query: 163 RLSWVSLGGTAWCARAAERRRRFPFSVIPREEVVLGEKLGSGASGDVYAAIYNGQNVAVKVFKSDVSPDGNARDELDVACAVDHPNLTKAIGIVRANRSDGGDGDHGVTNSDCRINRKQWLVMEKVEGQPLAEKPDLTSVLRCRWEAGRRFESVLVLAVLLQVARAMSYLHEKNICHGDLYAHNVLVDGETGASVLCDFGASFFYQNLSERHDPNGFALEGAEVRAFGIMARDMACR-------SVGCEWILQD----LAPSCIQADTFLRPSF 951
RL+W S+ G C P + REE+ LG+KLG GASGDV+ A++ G+ VAVK F++DVSPDG DE+ +A A+ HP+LT+ +G R+ LV+ G+PLA KP +LRC+W RF LA+ +VA A+ Y H +CHGD+YAHNVL+D E G+ LCDFGAS+ Y + E EVRA+G++ RD+ R + G + D LA C++ RP+F
Sbjct: 264 RLAWFSVAGNPACPDPPPPAPGLPL--VAREELELGQKLGDGASGDVFRAVWRGELVAVKFFRADVSPDGRTEDEVALAIALQHPHLTQVLG---------------------RVEHPSGLVLRLESGKPLAHKPTSAHLLRCKWADETRFPLPRALALAARVADALRYCHAAGVCHGDVYAHNVLMD-EDGSVTLCDFGASYSYDRTRQPF------WEAMEVRAYGLLLRDVVARCDPPASAAAGAAAAVVDGLRALAERCVELAPAQRPTF 507
BLAST of mRNA_H-elongata_contig10529.438.1 vs. uniprot
Match: A0A150GRA6_GONPE (Protein kinase domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GRA6_GONPE) HSP 1 Score: 172 bits (435), Expect = 2.370e-46 Identity = 106/269 (39.41%), Postives = 141/269 (52.42%), Query Frame = 1
Query: 163 RLSWVSLGGTAWCARAAERRRRFPFSVIPREEVVLGEKLGSGASGDVYAAIYNGQNVAVKVFKSDVSPDGNARDELDVACAVDHPNLTKAIGIVRANRSDGGDGDHGVTNSDCRINRKQWLVMEKVEGQPLAEKPDLTSVLRCRWEAGRRFESVLVLAVLLQVARAMSYLHEKNICHGDLYAHNVLVDGETGASVLCDFGASFFYQNLSERHDPNGFALEGAEVRAFGIMARDMA--CRSVGCE----WILQDLAPSCIQADTFLRPSF 951
RL+W S+ G C R P + +E+ LG+KLG GASG+VY AI+ G+ VAVK F+SDVSPDG DE+ +A A+ HP++T+ + VR HG LV+ V G PLA KP +LRC+W +F + + VA A+ + HE ICHGD+YAHNVL+D + + +CDFGASF Y S+ E EVRA+G+M RD+ C V L+ LA C Q RPSF
Sbjct: 193 RLAWFSVAGNPACPEPPAREAVLPE--VDEDELELGQKLGDGASGEVYRAIWKGELVAVKFFRSDVSPDGRTEDEVALAIALQHPHVTQVLAKVRY--------PHG-------------LVLRLVTGTPLAHKPTSAHLLRCKWGGDVQFPLRRAMRLATAVADALQHCHEVGICHGDVYAHNVLMDEDENVT-MCDFGASFSYDRKSQPF------WEAMEVRAYGLMLRDVVDRCDDVAAPAEVATALRRLAERCTQLAPAQRPSF 431
BLAST of mRNA_H-elongata_contig10529.438.1 vs. uniprot
Match: A0A250XG00_9CHLO (Protein kinase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XG00_9CHLO) HSP 1 Score: 173 bits (438), Expect = 8.670e-46 Identity = 98/233 (42.06%), Postives = 134/233 (57.51%), Query Frame = 1
Query: 166 LSWVSLGGTAWCARAAERRRRFPFSVIPREEVVLGEKLGSGASGDVYAAIYNGQNVAVKVFKSDVSPDGNARDELDVACAVDHPNLTKAIGIVRANRSDGGDGDHGVTNSDCRINRKQWLVMEKVEGQPLAEKPDLTSVLRCRWEAGRRFESVLVLAVLLQVARAMSYLHEKNICHGDLYAHNVLVDGETGASVLCDFGASFFYQNLSERHDPNGFALEGAEVRAFGIMARDM 864
L+W SLGG C R + R S+ + +L EKLG GASG+V A Y G+ VAVK F+SDVSPDG +E+ +AC VDHPNLT+ + V++ G T++ + +VME G PLA KP +LRC+W+ + V L V+ A++YLH ICHGD+YAHN+LVD G +++CDFGASF Y+ GF + EVRAFG+ +D+
Sbjct: 308 LAWFSLGGNLAC-RQMPKPRPDVVSIAMEDIQLLNEKLGDGASGEVLRASYQGREVAVKSFRSDVSPDGRTAEEVAIACHVDHPNLTRVLATVQS---------AGQTSAPNSVAAVIAVVMEIYNGAPLAAKPTSEHLLRCKWDPNKSISCGYAHKVALGVSSALAYLHGLFICHGDVYAHNILVD-TAGKAIVCDFGASFCYEE-----GQRGF-WQSMEVRAFGLFLQDL 523
BLAST of mRNA_H-elongata_contig10529.438.1 vs. uniprot
Match: A0A2K3DNM2_CHLRE (Protein kinase domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DNM2_CHLRE) HSP 1 Score: 171 bits (433), Expect = 2.210e-45 Identity = 97/238 (40.76%), Postives = 129/238 (54.20%), Query Frame = 1
Query: 163 RLSWVSLGGTAWCARAAERRRRFPFSVIPREEVVLGEKLGSGASGDVYAAIYNGQNVAVKVFKSDVSPDGNARDELDVACAVDHPNLTKAIGIVRANRSDGGDGDHGVTNSDCRINRKQWLVMEKVEGQPLAEKPDLTSVLRCRWEAGRRFESVLVLAVLLQVARAMSYLHEKNICHGDLYAHNVLVDGETGASVLCDFGASFFYQNLSERHDPNGFALEGAEVRAFGIMARDMACRS 876
RL+W S+ G C P V+ EE+ LG+KLG GASGDVY A++ GQ VAVK F++DVSPDG DE+ +A ++ HP+LT+ + R+ + LV+ G PLA KP +LRC+W RF L + VA A+ Y H ICHGD+YAHNVL+D E G LCDFGASF Y ++ E EVRA+G+M +D+A R+
Sbjct: 271 RLAWFSVAGNPVCPGPPAPAPGLP--VVAPEELELGQKLGDGASGDVYRAVWRGQLVAVKYFRADVSPDGRTEDEVALAVSLQHPHLTQVL---------------------ARVEKPHGLVLRLEAGSPLAAKPTSQHLLRCKWGDDVRFPPRRALGLAAAVADALRYCHAAGICHGDVYAHNVLMD-ENGTVTLCDFGASFSYDRAAQPF------WEAMEVRAYGLMLKDVADRA 478 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10529.438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10529.438.1 >prot_H-elongata_contig10529.438.1 ID=prot_H-elongata_contig10529.438.1|Name=mRNA_H-elongata_contig10529.438.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=319bp QIVKLRRLKKLQMSFNNLRSLPMGMEGMRSLELFRRLAVNPDLAMVPESFback to top mRNA from alignment at H-elongata_contig10529:4081..8471- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10529.438.1 ID=mRNA_H-elongata_contig10529.438.1|Name=mRNA_H-elongata_contig10529.438.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4391bp|location=Sequence derived from alignment at H-elongata_contig10529:4081..8471- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10529:4081..8471- >mRNA_H-elongata_contig10529.438.1 ID=mRNA_H-elongata_contig10529.438.1|Name=mRNA_H-elongata_contig10529.438.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1914bp|location=Sequence derived from alignment at H-elongata_contig10529:4081..8471- (Himanthalia elongata Himel1 dioecious)back to top |