mRNA_H-elongata_contig10372.311.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10372.311.1
Unique NamemRNA_H-elongata_contig10372.311.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig10372.311.1 vs. uniprot
Match: A0A6H5L3R0_9PHAE (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3R0_9PHAE)

HSP 1 Score: 357 bits (916), Expect = 1.290e-116
Identity = 160/219 (73.06%), Postives = 190/219 (86.76%), Query Frame = 3
Query:  672 VSGALLPATGADEPPREATANYYEWRDVFPELEILVNGMADIVAECEQVAAWKAWPEKHYDEGGKLDWKVYPFMHTFPAHDESRRTWVESTCVRCPATTKLLRRLPNIRTALFSRLGGGSRIAGHQGWADLANHVLRCHLPLRVPSSGTCGLWVDGEIRQHTEGEIIVFDDSKLHKAFNDSTEDRLVLIVDMRRPSWIPLGIADGEHTAELDAFIDAFR 1328
            +S  L+    A E P++ T NYY+W+ +FPEL++LV+G+++I AEC QVAAWKAWPEKHYDEGG  DWKV+PF+HTFPA+DE+RRTW++STC RCPAT  +LRRLPNIRTALFSRLGGGSRI+GH+GWADLANHVLRCHLPL+VPS G CGLWV+ E+R H EGEIIVFDDSKLHKAFN+S+ +RLVLIVD+ RP  +PLG ADGEHT ELDAFIDAFR
Sbjct:   93 LSEELVVIGAAGEVPQDDTPNYYDWQYLFPELKVLVDGLSEIAAECAQVAAWKAWPEKHYDEGGGQDWKVFPFVHTFPAYDEARRTWIDSTCGRCPATAAILRRLPNIRTALFSRLGGGSRISGHRGWADLANHVLRCHLPLKVPSDGPCGLWVNEEVRHHVEGEIIVFDDSKLHKAFNESSGERLVLIVDILRPPGVPLGTADGEHTPELDAFIDAFR 311          
BLAST of mRNA_H-elongata_contig10372.311.1 vs. uniprot
Match: D7FJE5_ECTSI (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJE5_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 8.030e-84
Identity = 120/151 (79.47%), Postives = 138/151 (91.39%), Query Frame = 3
Query:  876 KVYPFMHTFPAHDESRRTWVESTCVRCPATTKLLRRLPNIRTALFSRLGGGSRIAGHQGWADLANHVLRCHLPLRVPSSGTCGLWVDGEIRQHTEGEIIVFDDSKLHKAFNDSTEDRLVLIVDMRRPSWIPLGIADGEHTAELDAFIDAFR 1328
            +V+PF+HTFPA+DE+RRTW++STC RCPAT  +LRRLPNIRTALFSRLGGGSRI+GH+GWADLANHVLRCHLPL+VPS G CGLWV+ E+R H EGEIIVFDDSKLHKAFN+S+E+RLVLIVD+ RP  +PLG ADGEHT ELDAFIDAFR
Sbjct:    5 RVFPFVHTFPAYDEARRTWIDSTCGRCPATAAILRRLPNIRTALFSRLGGGSRISGHRGWADLANHVLRCHLPLKVPSDGPCGLWVNEEVRHHVEGEIIVFDDSKLHKAFNESSEERLVLIVDILRPPGVPLGTADGEHTPELDAFIDAFR 155          
BLAST of mRNA_H-elongata_contig10372.311.1 vs. uniprot
Match: A0A6V1W3Q8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1W3Q8_HETAK)

HSP 1 Score: 267 bits (682), Expect = 2.270e-82
Identity = 118/197 (59.90%), Postives = 147/197 (74.62%), Query Frame = 3
Query:  735 YYEWRDVFPELEILVNGMADIVAECEQVAAWKAWPEKHYDEGGKLDWKVYPFMHTFPAHDESRRTWVESTCVRCPATTKLLRRLPNIRTALFSRLGGGSRIAGHQGWADLANHVLRCHLPLRVPSSGTCGLWVDGEIRQHTEGEIIVFDDSKLHKAFNDSTEDRLVLIVDMRRPSWIPLGIADGEHTAELDAFIDAF 1325
            YY+WR+++P+L++L++   DI+ E E V  W AWPE H+ EGG  DWKV+PF + FPA DESR  WVE TC  CP T ++L+++P +RTALFSRLG G+R++ H GW DLANHVLR HL LRVP  G CGLWV+G++  H   +I VFDDSK HKAFNDS E+RLVLIVD+ RP  +P G A G HTAELD FI AF
Sbjct:   57 YYDWRELYPQLQVLIDNYEDILQEAEAVTGWHAWPEYHFREGGNNDWKVFPFAYCFPADDESRLAWVEKTCSYCPKTVEVLKQIPGLRTALFSRLGPGTRLSTHTGWEDLANHVLRAHLGLRVPPGGRCGLWVEGKVELHEARQINVFDDSKRHKAFNDSAEERLVLIVDLARPEGVPRGRAVGGHTAELDRFIGAF 253          
BLAST of mRNA_H-elongata_contig10372.311.1 vs. uniprot
Match: A0A7S2UZL3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZL3_9STRA)

HSP 1 Score: 256 bits (655), Expect = 4.720e-78
Identity = 116/200 (58.00%), Postives = 150/200 (75.00%), Query Frame = 3
Query:  735 YYEWRDVFPELEILVNGMADIVAECEQVAAWKAWPEKHYDEGGKLDWKVYPFMHTFPAHDESRRTWVESTCVRCPATTKLLRRLPNIRTALFSRLGGGSRIAGHQGWADLANHVLRCHLPLRVPSSG-TCGLWVDGEIRQHTEGEIIVFDDSKLHKAFNDSTEDRLVLIVDMRRPSWIPLGIADGEHTAELDAFID-AFR 1328
            +Y+WR  +PEL++L++    I+ E + +  WKAWPE H++EGG  DWKV+PF+HTFPA       WV  TC +CP T  LLR+LPN+RTALFSRLG G++++ H+GWADLAN VLRCHL L++P    +CG+WV+G+I+ H + EIIVFDDSKLHKAFN S+ +RLVLI DM RP+ IP G A G HT ELD FI+ AFR
Sbjct:   76 FYDWRQYYPELQLLIDNFDQILEEAQSLIGWKAWPEYHFEEGGGDDWKVFPFLHTFPATSPENAVWVGPTCRKCPKTVSLLRQLPNLRTALFSRLGSGTKLSTHRGWADLANFVLRCHLSLKIPDPPESCGVWVEGQIQHHRDKEIIVFDDSKLHKAFNTSSGERLVLIFDMIRPNDIPQGRAKGPHTPELDNFIEKAFR 275          
BLAST of mRNA_H-elongata_contig10372.311.1 vs. uniprot
Match: A0A7S2SV16_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV16_9STRA)

HSP 1 Score: 257 bits (657), Expect = 3.100e-76
Identity = 116/217 (53.46%), Postives = 156/217 (71.89%), Query Frame = 3
Query:  681 ALLPATGADEPPREATANYYEWRDVFPELEILVNGMADIVAECEQV--AAWKAWPEKHYDEGGKLDWKVYPFMHTFPAHDESRRTWVESTCVRCPATTKLLRRLPNIRTALFSRLGGGSRIAGHQGWADLANHVLRCHLPLRVPSSGTCGLWVDGEIRQHTEGEIIVFDDSKLHKAFNDSTEDRLVLIVDMRRPSWIPLGIADGEHTAELDAFIDAF 1325
            AL       E   E   +++ WR V+PEL++LV+ +  I+A+  ++  ++WK WPE HY +GG  DWK++PF HTFPAHD +RR ++E TC  CP T  LL++LP++RTALFSRLGG  RI+ H+GWADLANHVLRCHL L VP    C +WV GE++ H EG +IVFDDSKLHKA N++ +DR+VLIVD+ RP+ +PLG A G+ T EL+  I+ F
Sbjct:  219 ALHGVIEGQEGELEPLQSFHSWRAVYPELQLLVDHLDVILADARRIQGSSWKPWPEMHYSDGGSEDWKIFPFCHTFPAHDITRRCFIEGTCEFCPGTASLLKQLPSVRTALFSRLGGKGRISAHRGWADLANHVLRCHLSLVVPEKRGCAVWVRGEVQSHEEGGVIVFDDSKLHKACNETVDDRIVLIVDLARPAHLPLGRAVGDRTPELNNLIEYF 435          
BLAST of mRNA_H-elongata_contig10372.311.1 vs. uniprot
Match: A0A7S3MI66_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MI66_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.450e-73
Identity = 115/218 (52.75%), Postives = 146/218 (66.97%), Query Frame = 3
Query:  690 PATGADEPPREATANYYEWRDVFPELEILVNGMADIVAECEQVAAWKAWPEKHYDEGGKL----DWKVYPFMHTFPAHDESRRTWVESTCVRCPATTKLLRRLPNIRTALFSRLGGGSRIAGHQGWADLANHVLRCHLPLRVPSSGTCGLWVDGEIRQHTEGEIIVFDDSKLHKAFNDST-EDRLVLIVDMRRPSWIPLGIADGEHTAELDAFIDAFR 1328
            P+ G+     E    +Y WR++FPELE+L+N +A I  E + +  W  WPE H+  G  +    DW V+P +HTFPA+      WV STC RCP T KLL+ +P +RTALFSRLG G++++ H GWADLAN+VLRCHL L VP+ GTCGL VDGEI+ H    I+VFDDSK H+AFN+ST  +R VLI D+ RP  IP G A G HT ELD FI  F+
Sbjct:   18 PSVGSKRFDTEVAPCFYNWRELFPELEVLLNNIAVIKEESKSIGQWIPWPEDHFTLGDDVENSKDWTVFPLLHTFPAYCPENSKWVGSTCARCPETVKLLKSIPTLRTALFSRLGPGTKLSSHTGWADLANYVLRCHLCLDVPTDGTCGLLVDGEIQYHRPNHILVFDDSKPHRAFNNSTLNNRTVLIFDLWRPQDIPRGTATGNHTDELDGFISQFK 235          
BLAST of mRNA_H-elongata_contig10372.311.1 vs. uniprot
Match: A0A6U0VYJ3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VYJ3_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.140e-69
Identity = 111/238 (46.64%), Postives = 152/238 (63.87%), Query Frame = 3
Query:  648 IAKEHGFHVSGALLPATGADEPPREATANYYEWRDVFPELEILVNGMADIVAECEQVAAWKAWPEKHYDEGGKLDWKVYPFMHTFPAHDESRRTWVESTCVRCPATTKLLRRLPNIRTALFSRLGGGSRIAGHQGWADLANHVLRCHLPLRVPS-----SG-------TCGLWVDGEIRQHTEGEIIVFDDSKLHKAFNDSTEDRLVLIVDMRRPSWIPLGIADGEHTAELDAFIDAF 1325
            +  E    +  +L  AT A  P      ++Y W +V+P L+ L++   +I AE + +  W  WPE H+ +GG  +W V+P  +TFPA D   + W+E  C  CPATT++LR++P +RTALFSRLG  +R++GH GW DLANHVLR HL L VP      SG       +CG+WV+ E+  H EG+++VFDDS +H A+N S EDR+VLI+D+ RP W+P G A G HT ELDAFID F
Sbjct:   50 VLPEDAEEIEASLADATEAPIP-MPVLPSFYPWEEVYPFLQPLIDCAEEIKAEAKAIPMWAEWPEYHFRDGGNAEWNVFPLTYTFPATDPHAQRWLEQPCGLCPATTRVLRKIPGLRTALFSRLGPQTRLSGHTGWEDLANHVLRVHLSLTVPKRNRKPSGLAGEDLSSCGVWVNEEVWGHQEGQLLVFDDSLVHGAYNHSDEDRVVLIIDIERPPWLPPGRATGGHTPELDAFIDQF 286          
BLAST of mRNA_H-elongata_contig10372.311.1 vs. uniprot
Match: A0A836CEF1_9STRA (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEF1_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.010e-67
Identity = 121/236 (51.27%), Postives = 148/236 (62.71%), Query Frame = 3
Query:  735 YYEWRDVFPELEILVN--GMADIVAECEQV-AAWKAWPEKHYDEGGKLDWKVYPFMHTFPAHDESRRTWVESTCVRCPATTKLLRRLPNIRTALFSRLGGGSRIAGHQGWADLANHVLRCHLPLRVP------------------------------------SSGTCGLWVDGEIRQHTEGEIIVFDDSKLHKAFNDSTEDRLVLIVDMRRPSWIPLGIADGEHTAELDAFIDAF 1325
            + +WRDV+PEL IL+    ++DI+ E   V +AWKAWPE HY EGG  DWKV PF H FPA D S+ TWV  TC  CP T  LLR+LP +RTALFSRLGGG++I+ H+GW+DLAN VLRCHL L VP                                    S G CG+WV+G+ R H +GEI+VFDDSKLHKA+N S  +R+VLIVD+ RP  +P G A    TAEL+ FI AF
Sbjct:  361 FLDWRDVYPELGILLEPQNLSDIMEEMRSVRSAWKAWPETHYSEGGSEDWKVVPFAHCFPACDASKLTWVPHTCAHCPRTVALLRQLPTLRTALFSRLGGGTKISSHRGWSDLANDVLRCHLALVVPPDDPHSRALKGXXXXXXXXXXXXXXXXXXXXXXXXESDGCCGIWVEGQRRAHRQGEIMVFDDSKLHKAYNHSYHERVVLIVDLLRPPHVPRGTARRGMTAELEGFIAAF 596          
BLAST of mRNA_H-elongata_contig10372.311.1 vs. uniprot
Match: A0A7S3LIY3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LIY3_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.110e-65
Identity = 107/205 (52.20%), Postives = 141/205 (68.78%), Query Frame = 3
Query:  735 YYEWRDVFPELEILVNGMADIVAECEQVAA---WKAWPEKHYDEGGKLD--WKVYPFMHTFPAHDESRRTWVESTCVRCPATTKLLRRLPNIRTALFSRLGGGSRIAGHQGWADLANHVLRCHLPLRVPS--SGTCGLWVDGEIRQHTEGEIIVFDDSKLHKAFNDSTEDRLVLIVDMRRPSWIPLGIADGEHTAELDAFIDAFR 1328
            YY+W+ VFPEL+I+ +    I  E   +     W  WPE+    G +    WKV P ++TFPA+DES   W+ S    CP TT+LL+++PNIRTALFSRLGG +R++ HQGWADLAN+VLRCHLPL VP   +  CG+WV+G ++ H  G+++VFDDSK HKAFN S +DR+VLI D+ RP  IP G+A G HT  LD FI +F+
Sbjct:   84 YYDWKKVFPELKIIEDNFKVIQRELVTLMESREWTPWPEERLYNGPQQSGQWKVIPLLYTFPAYDESSSKWITSNNKLCPKTTELLKKIPNIRTALFSRLGGTTRLSQHQGWADLANYVLRCHLPLIVPQPEANLCGMWVEGHVQYHKPGKLLVFDDSKHHKAFNASDQDRMVLIFDILRPKKIPKGLATGGHTEHLDQFISSFQ 288          
BLAST of mRNA_H-elongata_contig10372.311.1 vs. uniprot
Match: A0A2R5GA97_9STRA (Aspartate beta-hydroxylase domain-containing protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GA97_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.030e-62
Identity = 101/202 (50.00%), Postives = 142/202 (70.30%), Query Frame = 3
Query:  735 YYEWRDVFPELEILVNGMADIVAECEQVAA--WKAWPE-KHYDEGGKL-DWKVYPFMHTFPAHDESRRTWVESTCVRCPATTKLLRRLPNIRTALFSRLGGGSRIAGHQGWADLANHVLRCHLPLRVPSS----GTCGLWVDGEIRQHTEGEIIVFDDSKLHKAFNDSTEDRLVLIVDMRRPSWIPLGIADGEHTAELDAFI 1316
            YY+WR+ FPE++ L++   ++V E + + +  W  WPE K Y    +  DWKV P MHTFPA D  R   +E  C  CP T  LL+++P +RT L+SRLG  +R++ HQGWADLAN+VLRCHLPL +P+     G+CG+WV+GEI++H E +++VFDDSK+HKA+N S E+R++LI D+ RP  +P G+A G HT +LD FI
Sbjct:  170 YYDWREYFPEVQGLLDHFDELVEEMKTLTSGRWCPWPEYKLYQAEDQFGDWKVIPLMHTFPAWDSKRTKLIEGNCKACPLTMSLLKKIPGLRTVLYSRLGPRTRLSSHQGWADLANYVLRCHLPLVLPTDEKFRGSCGMWVEGEIQKHKERDVLVFDDSKMHKAYNASEEERIILIFDVVRPDQLPKGLASGGHTEQLDEFI 371          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10372.311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3R0_9PHAE1.290e-11673.06Asp_Arg_Hydrox domain-containing protein n=1 Tax=E... [more]
D7FJE5_ECTSI8.030e-8479.47Asp_Arg_Hydrox domain-containing protein n=1 Tax=E... [more]
A0A6V1W3Q8_HETAK2.270e-8259.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UZL3_9STRA4.720e-7858.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SV16_9STRA3.100e-7653.46Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3MI66_9STRA1.450e-7352.75Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6U0VYJ3_9STRA2.140e-6946.64Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A836CEF1_9STRA1.010e-6751.27Asp_Arg_Hydrox domain-containing protein n=1 Tax=T... [more]
A0A7S3LIY3_9STRA1.110e-6552.20Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A2R5GA97_9STRA1.030e-6250.00Aspartate beta-hydroxylase domain-containing prote... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10372contigH-elongata_contig10372:122..2928 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score269.2
Seed ortholog evalue2.6e-69
Seed eggNOG ortholog2880.D7FJE5
EggNOG free text desc.Aspartyl/Asparaginyl beta-hydroxylase
EggNOG OGs2S66E@2759,COG3555@1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionIsopenicillin N synthase-like
Ec32 orthologEc-14_006050.1
Exons3
Model size1712
Cds size1035
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10372.311.1prot_H-elongata_contig10372.311.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10372 503..2632 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929572.0938838-UTR-H-elongata_contig10372:121..5021622929572.0938838-UTR-H-elongata_contig10372:121..502Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10372 122..502 -
1691679075.5312958-UTR-H-elongata_contig10372:121..5021691679075.5312958-UTR-H-elongata_contig10372:121..502Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10372 122..502 -
1622929572.1523905-UTR-H-elongata_contig10372:2632..29281622929572.1523905-UTR-H-elongata_contig10372:2632..2928Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10372 2633..2928 -
1691679075.5638616-UTR-H-elongata_contig10372:2632..29281691679075.5638616-UTR-H-elongata_contig10372:2632..2928Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10372 2633..2928 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929572.1104424-CDS-H-elongata_contig10372:502..6911622929572.1104424-CDS-H-elongata_contig10372:502..691Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10372 503..691 -
1691679075.54084-CDS-H-elongata_contig10372:502..6911691679075.54084-CDS-H-elongata_contig10372:502..691Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10372 503..691 -
1622929572.1260045-CDS-H-elongata_contig10372:1168..14321622929572.1260045-CDS-H-elongata_contig10372:1168..1432Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10372 1169..1432 -
1691679075.548868-CDS-H-elongata_contig10372:1168..14321691679075.548868-CDS-H-elongata_contig10372:1168..1432Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10372 1169..1432 -
1622929572.1419199-CDS-H-elongata_contig10372:2050..26321622929572.1419199-CDS-H-elongata_contig10372:2050..2632Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10372 2051..2632 -
1691679075.55614-CDS-H-elongata_contig10372:2050..26321691679075.55614-CDS-H-elongata_contig10372:2050..2632Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10372 2051..2632 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10372.311.1

>prot_H-elongata_contig10372.311.1 ID=prot_H-elongata_contig10372.311.1|Name=mRNA_H-elongata_contig10372.311.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=345bp
MKRVSLENEKSAEREGEMVPQERQQEQKDMKSVLPQPASRASRPPASPSL
GMSLLSSMPTPRSQAQAVQETATELSTAVGTSVSVIGPSPLARDQKEREQ
LLHDENPYEGRESTHGYIAKEHGFHVSGALLPATGADEPPREATANYYEW
RDVFPELEILVNGMADIVAECEQVAAWKAWPEKHYDEGGKLDWKVYPFMH
TFPAHDESRRTWVESTCVRCPATTKLLRRLPNIRTALFSRLGGGSRIAGH
QGWADLANHVLRCHLPLRVPSSGTCGLWVDGEIRQHTEGEIIVFDDSKLH
KAFNDSTEDRLVLIVDMRRPSWIPLGIADGEHTAELDAFIDAFR*
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mRNA from alignment at H-elongata_contig10372:122..2928-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10372.311.1 ID=mRNA_H-elongata_contig10372.311.1|Name=mRNA_H-elongata_contig10372.311.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2807bp|location=Sequence derived from alignment at H-elongata_contig10372:122..2928- (Himanthalia elongata Himel1 dioecious)
CTGCAGAGAGTGCAGTACATAGGCATGGTTGGCCATACGTGTTAACCCTG TTAGCAAAAAGCTACATGGCATCGAACTGATACTGGGCCTTCAACATTTT GGAGCCTGCTTTTTAGTCTCGCCAAAATTGGGACCGCGATAGAGACATAC ATCGTCCCCAGCTTTGCGAAGGCGAAAACGTATTCTACGTCCCGTTTCGT GAGATTGCCTGAGGAGGAGAAACGACCTCTTCGAACACACAGACGGGGTG ATATCCTCGTGATTATTATACGGCCTGGCAGGGCAAAAGTAGCGCCATGA AACGTGTCAGCCTCGAGAACGAGAAATCTGCGGAGCGAGAGGGAGAAATG GTCCCACAAGAACGACAGCAAGAACAAAAAGATATGAAGTCGGTTCTGCC ACAGCCGGCCTCCCGAGCCTCGCGGCCACCGGCGTCGCCCTCCCTAGGAA TGTCGCTTCTGTCATCCATGCCTACTCCCCGCTCACAAGCACAGGCGGTT CAAGAAACAGCAACAGAGCTATCCACCGCGGTTGGTACTAGTGTGAGTGT GATTGGGCCTTCCCCGTTGGCGAGAGACCAAAAAGAACGAGAACAACTGC TACACGACGAGAACCCTTACGAGGGAAGGGAATCAACGCACGGGTATATT GCGAAGGAGCATGGGTTTCACGTGTCCGGAGCCTTGCTTCCGGCAACGGG AGCGGACGAGCCGCCTCGAGAAGCAACCGCGAACTACTACGAGTGGAGGG ACGTTTTTCCTGAGCTAGAAATCCTCGTGAATGGTATGGCGGATATTGTG GCCGAGTGTGAACAGGTGGCTGCCTGGAAGGCCTGGCCGGAGAAGCACTA CGATGAGGGAGGGAAGCTCGACTGGAAGGCGAGAGCCGCTTTCGGGCGTT ACGCGCCACTTTTGTAATTTTTAACAAAGTACAAGGCGAAGTCTTTGCAA ATTATTACCGAGTATCAGGTACAATTTATTATCCCTTTCTCTTGACTTTT TCCACGAACCCTGTACGAGTAGTCGATCTCGAAAGCGCGGCAAAGCTCGC TCCGACTCAAAACGCACCATTAATAGCCGCCGATGACAAACAGCAATCCA TATCTTGTTGCGGCGGAAAATTATGTAAGCGACGCGGCGTGAGTCTTCCC ATGGCGCTTCCCAAATCGGGTTTGATAAACGTATCTCACGACAGTATACA TGTTTCAATTGATATACATATGCTGCGGTACAAGGGGCACACGTGCAGAC TTATCCCCGCAGGTATTCCCCGAAGGTTCCGCAGATGACGTTCCAGCCCT GCACACGTAGCTATGGAACTTGCCCGACTCATAGGCGCTAATAATCCTGG CTCCGTTCTTAGAAAGCGCAGAATAGCGCCCTGGTTAGGCCTCGACACCG ACACGAAACCCTTTCGAACACCGTCCATCTCACATGTCGTCATTGCCCGC GCCCTACCGGCCTGCGGACGCTCTTTTTTCCGAAAAACAAAACAAGGTGT ACCCGTTCATGCACACGTTCCCCGCCCACGACGAGTCTCGGCGAACATGG GTGGAGAGCACGTGCGTGCGTTGCCCAGCAACAACGAAACTCTTGCGTCG CCTGCCCAACATTCGGACGGCGCTATTCTCTCGACTCGGAGGTGGATCGC GTATCGCGGGACACCAGGGGTGGGCCGACCTCGCTAACCACGTACTGCGA TGTCACCTGCCGCTAAGGGTGCCCTCGAGCGGCACGTGCGGCCTCTGGGT TGACGGAGAGGTGCACTCGTATAAACTACATTAAGTCCTTGAAATAGTTG GTGTTTTTTTTATATTTTCCGCGTCAACACTCCTCGGGTTTTGAAATGTT CCATGGAGTCAGCGAGGGTGTCAGCCTCACGAGCAAGGTAGAGGTAGCTG ACTAGATAAGACACCCAACGTGGTTGATTACGTGTTGCGTTATCCTTTTT TTTTGTGGCTGATGCAAAATTGAACAATGTGAATCATTGTTCGATGAAGC GGCTTTTTACATGTGATAACTGGTTGCACTTGTGGTTGATATCGGACCTC TTTATCCTCCAAGATCCAGGTCTGGAATCCTCTATTCTTTGACCAAGGTA CCACAATGCTGCCCAATGTCGATTTTCCCTTACGGCTACGGCAAATGTGA TCCTCCGCTCATCTGTCCCATTTTCCCACCTCTCTCTAACCTCATCTTAC CTCATCACGATTTTCTCGCGGTACTCATTCGCCACAGATCCGACAGCACA CAGAAGGCGAGATAATCGTTTTCGATGACAGCAAGCTACATAAGGCGTTC AACGACTCCACCGAAGACAGACTGGTGCTGATCGTCGATATGCGCAGACC CTCGTGGATACCCCTGGGAATCGCTGACGGGGAGCACACGGCGGAGCTCG ACGCCTTCATCGACGCCTTCAGATAGGACCCCTCGCTGAAATGTTCATTT GTGAAATTAGGGTCGAGGAATGCCGTGTCGTGGGAGATGCTGGAGGCTCT GTAATCCGTGAACGTATTTCCGAGCGAGTAGCTGCCTGACCCACTGCTGC TGCTGCGAGCCAATTCCCGAACCGCTCTGGCGCAACCACTCTATAAAGTT CGGACGGTATTTATCGTCCGTTGTGGGGGGATGTCTCTGCCCTCTATATC GTCGCGACACGGCCTTGTCCCTGTCTCTGTCCAGAGACTCCTATGCTCGA AACGTGTCCGACTTTGGCCGTTTTTTGTGGCACGCGCTGGGAGGAACGAG TGTTTAGTTATTGCCTGCTACCGAAGCGGGCAAGAGAATGAATGTTAGGT TGTTGTC
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Coding sequence (CDS) from alignment at H-elongata_contig10372:122..2928-

>mRNA_H-elongata_contig10372.311.1 ID=mRNA_H-elongata_contig10372.311.1|Name=mRNA_H-elongata_contig10372.311.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2070bp|location=Sequence derived from alignment at H-elongata_contig10372:122..2928- (Himanthalia elongata Himel1 dioecious)
ATGAAACGTGTCAGCCTCGAGAACGAGAAATCTGCGGAGCGAGAGGGAGA
AATGGTCCCACAAGAACGACAGCAAGAACAAAAAGATATGAAGTCGGTTC
TGCCACAGCCGGCCTCCCGAGCCTCGCGGCCACCGGCGTCGCCCTCCCTA
GGAATGTCGCTTCTGTCATCCATGCCTACTCCCCGCTCACAAGCACAGGC
GGTTCAAGAAACAGCAACAGAGCTATCCACCGCGGTTGGTACTAGTGTGA
GTGTGATTGGGCCTTCCCCGTTGGCGAGAGACCAAAAAGAACGAGAACAA
CTGCTACACGACGAGAACCCTTACGAGGGAAGGGAATCAACGCACGGGTA
TATTGCGAAGGAGCATGGGTTTCACGTGTCCGGAGCCTTGCTTCCGGCAA
CGGGAGCGGACGAGCCGCCTCGAGAAGCAACCGCGAACTACTACGAGTGG
AGGGACGTTTTTCCTGAGCTAGAAATCCTCGTGAATGGTATGGCGGATAT
TGTGGCCGAGTGTGAACAGGTGGCTGCCTGGAAGGCCTGGCCGGAGAAGC
ACTACGATGAGGGAGGGAAGCTCGACTGGAAGATGAAACGTGTCAGCCTC
GAGAACGAGAAATCTGCGGAGCGAGAGGGAGAAATGGTCCCACAAGAACG
ACAGCAAGAACAAAAAGATATGAAGTCGGTTCTGCCACAGCCGGCCTCCC
GAGCCTCGCGGCCACCGGCGTCGCCCTCCCTAGGAATGTCGCTTCTGTCA
TCCATGCCTACTCCCCGCTCACAAGCACAGGCGGTTCAAGAAACAGCAAC
AGAGCTATCCACCGCGGTTGGTACTAGTGTGAGTGTGATTGGGCCTTCCC
CGTTGGCGAGAGACCAAAAAGAACGAGAACAACTGCTACACGACGAGAAC
CCTTACGAGGGAAGGGAATCAACGCACGGGTATATTGCGAAGGAGCATGG
GTTTCACGTGTCCGGAGCCTTGCTTCCGGCAACGGGAGCGGACGAGCCGC
CTCGAGAAGCAACCGCGAACTACTACGAGTGGAGGGACGTTTTTCCTGAG
CTAGAAATCCTCGTGAATGGTATGGCGGATATTGTGGCCGAGTGTGAACA
GGTGGCTGCCTGGAAGGCCTGGCCGGAGAAGCACTACGATGAGGGAGGGA
AGCTCGACTGGAAGGTGTACCCGTTCATGCACACGTTCCCCGCCCACGAC
GAGTCTCGGCGAACATGGGTGGAGAGCACGTGCGTGCGTTGCCCAGCAAC
AACGAAACTCTTGCGTCGCCTGCCCAACATTCGGACGGCGCTATTCTCTC
GACTCGGAGGTGGATCGCGTATCGCGGGACACCAGGGGTGGGCCGACCTC
GCTAACCACGTACTGCGATGTCACCTGCCGCTAAGGGTGCCCTCGAGCGG
CACGTGCGGCCTCTGGGTTGACGGAGAGGTGTACCCGTTCATGCACACGT
TCCCCGCCCACGACGAGTCTCGGCGAACATGGGTGGAGAGCACGTGCGTG
CGTTGCCCAGCAACAACGAAACTCTTGCGTCGCCTGCCCAACATTCGGAC
GGCGCTATTCTCTCGACTCGGAGGTGGATCGCGTATCGCGGGACACCAGG
GGTGGGCCGACCTCGCTAACCACGTACTGCGATGTCACCTGCCGCTAAGG
GTGCCCTCGAGCGGCACGTGCGGCCTCTGGGTTGACGGAGAGATCCGACA
GCACACAGAAGGCGAGATAATCGTTTTCGATGACAGCAAGCTACATAAGG
CGTTCAACGACTCCACCGAAGACAGACTGGTGCTGATCGTCGATATGCGC
AGACCCTCGTGGATACCCCTGGGAATCGCTGACGGGGAGCACACGGCGGA
GCTCGACGCCTTCATCGACGCCTTCAGATAGATCCGACAGCACACAGAAG
GCGAGATAATCGTTTTCGATGACAGCAAGCTACATAAGGCGTTCAACGAC
TCCACCGAAGACAGACTGGTGCTGATCGTCGATATGCGCAGACCCTCGTG
GATACCCCTGGGAATCGCTGACGGGGAGCACACGGCGGAGCTCGACGCCT
TCATCGACGCCTTCAGATAG
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