mRNA_H-elongata_contig103659.304.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig103659.304.1
Unique NamemRNA_H-elongata_contig103659.304.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig103659.304.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 4.800e-53
Identity = 115/302 (38.08%), Postives = 166/302 (54.97%), Query Frame = 3
Query:  255 MPKAGSSTVLSILEGWGTRNNLAHARLTSDTLLSPEEPRRILTGNY-SLVTGGFTEALRSMGGGCGGGCKWFTVFRHPVSRLVSAYYYCRHKNPSDQICGKELVDH--DHVSLHAFAELWSNYGTREFVVSFVTPETIM-NSPAVRAV--------RAEVPGWYKIRLFAEELYRNQTAAE-SFAYEAPSGLHDEA--MEQFLRPAIELLRT-YDAVGLLEDFDNTMRMFDAALGMPGLNWSEEFQKQGVVNEGVNEVRAEQAETLRSAWTDPVLQRFLWLDMYLYDRAVAVHHKQMIRLGL 1112
            M KAG STV  +L  W    N+      S   L  ++  +   G+  SL+ G +TE LR  GG     CKWFT+FRHP+ RLVSAY+YC+ K P D +C    +D   D   L+AFAE W ++G R+F ++FV PE ++ N     A         +   PGWY+++L+ ++    Q   E S  ++        A  +   L+P  ELL   Y AVG+LE ++ ++ +F+ ALGMPG +W E F   G  N        E+AE L  +WTDP L+R+L LD+ LYD AV+VH++Q+ + GL
Sbjct:    1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDFLGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCK-KKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSD-GTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300          
BLAST of mRNA_H-elongata_contig103659.304.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 3.030e-51
Identity = 120/351 (34.19%), Postives = 182/351 (51.85%), Query Frame = 3
Query:  165 HHARP-PVPSADDCATTAAPMI--------DEGCWRYQGMPKAGSSTVLSIL-EGWGTRNNL----------AHARLTSDTLLSPEEPRRILTGNYSLVTGGFTEALRSMGGGCGGG----CKWFTVFRHPVSRLVSAYYYCRHKNPSDQICGKELVDHDHVSLHAFAELWSNYGTREFVVSFVTPETIM------NSPAVRAVRAE----VPGWYKIRLFAEELYRNQTAAESFAYEAPSGLHDEAMEQFLRPAIELLR-TYDAVGLLEDFDNTMRMFDAALGMPGLNWSEEFQKQGVVNEGVNEVRAEQAETLRSAWTDPVLQRFLWLDMYLYDRAVAVHHKQMIRLGL 1112
            HHA   P P A + +   AP +        +  CW +  + KAG +TV  +L + WG+ +             +A   + +L SP          +S   GG+ EALR             C+WFTVFRHPVSRLVSAYYYCR ++PSDQ+C  E V   +V L  FA  W N+  R+F + FV+ + +       N      + AE    +PGWY ++LF  +  R+  A ++    +P G     +E   RP ++LLR  Y  VG+LED++ T+ +FD+AL MPG+ W EEF++ G +N      + E+ + L+ A +DP + + L LD+ LY +AV + ++Q    G+
Sbjct:   55 HHAHVLPRPDAAEKSPQDAPALNIEDSPRSENRCWIFNHLQKAGGTTVKRLLFDSWGSESTTYDSYQWKKGQGYAESVAASLASP--------AGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCR-EDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLND--RSGVADDT----SPEGTR---LEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTR-FKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386          
BLAST of mRNA_H-elongata_contig103659.304.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 6.470e-49
Identity = 102/302 (33.77%), Postives = 158/302 (52.32%), Query Frame = 3
Query:  237 CWRYQGMPKAGSSTVLSILEGWGTRNNLAHARLTSDTLLSPEEPRRILTGNYSLVT-GGFTEALRSMGGGCGGGCKWFTVFRHPVSRLVSAYYYCRHKNPSDQICGKELVDHDHVSLHAFAELWSNYGTREFVVSFVTPETIMNSPAVRAVRAE--------VPGWYKIRLFAEELYRNQTAAESFAYEAPSGLHDEAMEQFLRPAIELLRT-YDAVGLLEDFDNTMRMFDAALGMPGLNWSEEFQKQGVVNEGVNEVRAEQAETLRSAWTDPVLQRFLWLDMYLYDRAVAVHHKQMIRLGL 1112
            CW +  M K+G  TV  ++  + T   ++ A        S            ++ T GG+TE LR         CKWFTVFRHPVSR+VSAY+YC+  +  DQ+C   ++D   V L  FAE W NYG R+F ++ +  E + ++  V     +        +P WY+ + +    +++     +   +  SGL      QFL  A E L T Y AVG++E++DN+M +F+  L +   +W +EFQK G  N G ++        L++AW  P L++F+WLD+ LYD A++VH  Q+  LG+
Sbjct:   52 CWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAETFVKENAVFTYGGYTEGLRMYDDR---DCKWFTVFRHPVSRVVSAYFYCQRAH-HDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPT---QPESGL-----AQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341          
BLAST of mRNA_H-elongata_contig103659.304.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 3.930e-46
Identity = 103/317 (32.49%), Postives = 169/317 (53.31%), Query Frame = 3
Query:  189 SADDCATTAAPMIDEGCWRYQGMPKAGSSTVLSILEG-WGTRNNLAHARLTS--DTLLSPEEPRRILTGNYSLVTGGFTEALRSMGGGCGGGCKWFTVFRHPVSRLVSAYYYCRHKNPSDQICGKELVDHDHVSLHAFAELWSNYGTREFVVSFVTPETIMNSPAVRAVRAEVPGWYKIRLFAEELYRNQTAA-----ESFAYEAPSGLHDEAMEQFLRPAIELLRT-YDAVGLLEDFDNTMRMFDAALGMPGLNWSEEFQKQGVVNEGVNEVRAEQAETLRSAWTDPVLQRFLWLDMYLYDRAVAVHHKQMIRLGL 1112
            +A   AT  +P     CW +  + K G STV  +LE  WG+R  +  +      D   +    +  L   ++++TGG+TEALR +    G GC++FT+FRHP++R+VSAY+YCR  +  D  C  E++    V L  FA+ W N+  R+F + FV  + +                Y+++++ E   +             A++  +   D  + + L+PA++L+R  Y AVG+LE ++ T+R+FD  L MP +NW E+F + G  +  +   + E  ETL+ AWTD  L++++ LD+ LY+ AV V H+Q    GL
Sbjct:  161 AASVAATVQSPASPGQCWVFMHLQKCGGSTVKDLLEDRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALR-LSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVS-GDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE--------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLE-IETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460          
BLAST of mRNA_H-elongata_contig103659.304.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 2.070e-45
Identity = 104/311 (33.44%), Postives = 177/311 (56.91%), Query Frame = 3
Query:  237 CWRYQGMPKAGSSTVLSILE-GWGTRNNLAHA---RLTSDTLLSPEEPRRILTGN-YSLVTGGFTEALRSMGGGCGGGCKWFTVFRHPVSRLVSAYYYCRHKNPSDQICGKELVDHDHVSLHAFAELWSNYGTREFVVSFVTPETI---MNSPAVRAVR----AEVPGWYKIRLFAEELYRN------QTAAESFAYEAPSGLHDEAMEQFLRPAIELLRT-YDAVGLLEDFDNTMRMFDAALGMPGLNWSEEFQKQGVVNEGVNEVRAEQAETLRSAWTDPVLQRFLWLDMYLYDRAVAVHHKQMIRLGL 1112
            CW +  + K G STV  +L   +G+R ++  +   +L  D  +S     ++  G  ++++ GG+TEALR        GC++FT+FRHP++R+VSAY+YCR     D  C  E+VD   V L  FA+ W N+  R+F + FV  + +   + +P  +A+      ++ GWY+++++ E   +       Q+ A +  ++A + L +  +   L+PA++L+R+ Y AVG+LE ++ T+ +FD AL +PG+ W  +F + G         R E +ETL+ AWTD  L++++ LD+ LY+ AV V H+Q    GL
Sbjct:  156 CWVFMHLQKCGGSTVKYMLRRSYGSRYSIYDSNQWKLGDD--ISANFGVKLARGETWNVMAGGYTEALRRSEP-VDAGCRFFTLFRHPIARMVSAYFYCR-STLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATL-EAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLE-SETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460          
BLAST of mRNA_H-elongata_contig103659.304.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 9.770e-44
Identity = 102/295 (34.58%), Postives = 159/295 (53.90%), Query Frame = 3
Query:  237 CWRYQGMPKAGSSTVLSILEGWGTRNNLAHARLTSDTLLSPEEP-RRILTGNYSLVTGGFTEALRSMGGGCGGGCKWFTVFRHPVSRLVSAYYYCRHKNPSDQICGKELVDHDHVSLHAFAELWSNYGTREFVVSFVTPETIMNSPAVRAVRAEVPGWYKIRLFAE-ELYRNQTAAESFAYEAPSGLHDEAMEQFLRPAIELLRT-YDAVGLLEDFDNTMRMFDAALGMPGLNWSEEFQKQGVVNEGVNEVRAEQAETLRSAWTDPVLQRFLWLDMYLYDRAVAVHHKQMIRLGL 1112
            CW Y  M KAG +++  +++ +    N      T     + +   ++IL    SL+ G +TE LR      G  CKWFT+ RHP++RLVSA+ YC    PSDQ+C   +   +   ++ FAE W N+G  +F ++F      +N   V  V++  P WYK +L+ E  L  +   + S          +  M + L+P  ELLR+ Y AVG+LE ++ +M +FD AL +PG NW+         N  V++ +A+  + L ++ TDPVL++ LWLD+ LY+ A +VH  Q+ R GL
Sbjct:   37 CWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLG--CKWFTMVRHPIARLVSAFNYCGIV-PSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFED----LNDILVTEVKS--PPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRN--VHDSKAKN-DLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319          
BLAST of mRNA_H-elongata_contig103659.304.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 3.120e-40
Identity = 80/217 (36.87%), Postives = 124/217 (57.14%), Query Frame = 3
Query:  474 FRHPVSRLVSAYYYCRHKNPSDQICGKELVDHDHVSLHAFAELWSNYGTREFVVSFVTPETIMNSPAVRAVRAE---VPGWYKIRLFAEELYRNQTAAESFAYEAPSGLHDEAMEQFLRPAIELL-RTYDAVGLLEDFDNTMRMFDAALGMPGLNWSEEFQKQGVVNEGVNEVRAEQAETLRSAWTDPVLQRFLWLDMYLYDRAVAVHHKQMIRLGL 1112
            ++ P+ RLVSAY+YC+ +N  D++C   ++   +  LH FA+ W NYG R+F ++FV  E +  +   R +       PGWY+++ + E  +      E    +     +D AM   L+P  +LL R Y AVG+LE ++ +M +F+ AL +P  NW    +  G  N     +  E+A  LR+AW DPVL + LWLD++LYD AVAVH+KQ+   G+
Sbjct:   18 YKCPIPRLVSAYFYCK-QNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQF--DVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVD-KRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230          
BLAST of mRNA_H-elongata_contig103659.304.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 3.370e-39
Identity = 98/301 (32.56%), Postives = 151/301 (50.17%), Query Frame = 3
Query:  237 CWRYQGMPKAGSSTVLSILEGWGTRNNLAHARLTSDTLLSPEEP-RRILTGNYSLVTGGFTEALRSMGGGCGGGCKWFTVFRHPVSRLVSAYYYCRHKNPSDQICGKELVDHDHVSLHAFAELWSNYGTREFVVSFVTPETIMNSPAVRAVRAEVPGWYKIRLFAEELYR---NQTAAESFAYEAPSGLHDEAME----QFLRPAIELLRT-YDAVGLLEDFDNTMRMFDAALGMPGLNWSEEFQKQGVVNEGVNEVRAEQAETLRSAWTDPVLQRFLWLDMYLYDRAVAVHHKQMIRLGL 1112
            CW +    KAG +TV + L  +    N   A   SD     ++  + +L     L+ GG+ E LR+       GCKWFT+ RHP++RL+SA+YYC   N  DQ+C   +   +   ++ FA+ W NY   +F +  V    I       A   + P W+K +L+ E       N + A +         HDE         L+P  ELLR+ Y AVG+LE +  +M +FD AL +PG NW+          +  N++  E+   L +A TDPVL++++WLD+ LY+ A ++H +Q+ R  L
Sbjct:   37 CWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGIQDLLNDKPVLIAGGYAEGLRTS---AFQGCKWFTMMRHPIARLISAFYYCSGGN-RDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIF------AEEVDAPAWFKAKLYFEGRLGYPGNMSTATNRT------THDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSP-RKSQNKI-VEKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319          
BLAST of mRNA_H-elongata_contig103659.304.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 1.230e-31
Identity = 97/307 (31.60%), Postives = 147/307 (47.88%), Query Frame = 3
Query:  228 DEGCWRYQGMPKAGSSTVLSIL-EGWGTRNNLAHARLTSDTLLSPEEPRR-------ILTGNYSLVTGGFTEALRSMGGGCGGGCKWFTVFRHPVSRLVSAYYYCRHKNPSDQICGKELVDHDHVSLHAFAELWSNYGTREFVVSFVTPETIMNSPAVRAVRAEVPGWYKIRLFAEELYRNQTAAESFAYEAPSGLHDEAMEQFLRPAIELLRT-YDAVGLLEDFDNTMRMFDAALGMPGLNWSEEFQKQGVVNEGV---NEVRAEQAETLRSAWTDPVLQRFLWLDMYLYDRAVAVHHKQMIRLGL 1112
            ++ CW +  M K+G+S    +  E W          L  DT+    + RR       ++  ++ L+ GG  E+LR+        CKW T+FRHP++RL+SAY++C  + P D +C       +   L  FAELW N+  R+F +  V+P  +    A R  R     WY ++   E L R   A             DE +E  L P   LL T Y AVG+ ++ + TM +F  AL M GL+WS  +   G+ NE V   +E    ++E  R A  +P +   L LDM LY+ A+ V   Q+ + G+
Sbjct:  270 EDSCWIFMHMDKSGASGARRVATERW------RKDELVFDTV----QWRRGDGFAADVMASHWKLLHGGCVESLRNHKERS---CKWLTIFRHPIARLLSAYHHCL-EAPKDPVCPPT----ESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSMWYLVK---EYLARGGIA------------EDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGI-NEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGI 542          
BLAST of mRNA_H-elongata_contig103659.304.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 5.500e-31
Identity = 84/249 (33.73%), Postives = 122/249 (49.00%), Query Frame = 3
Query:  375 ILTGNYSLVTGGFTEALRSMGGGCGGGCKWFTVFRHPVSRLVSAYYYCRHKNPSDQICGKELVDHDHVSLHAFAELWSNYGTREFVVSFVTPETIMNSPAVRAVRAEVPGWYKIRLFAEELYRNQTAAESFAYEAPSGLHDEAMEQFLRPAIELLRT-YDAVGLLEDFDNTMRMFDAALGMPGLNWSEEFQKQGVVNEGV--NEVRAEQAETLRSAWTDPVLQRFLWLDMYLYDRAVAVHHKQMIRLGL 1112
            ++   + L+ GG  E+LR+  G     CKW T+FRHP++RL+SAY +C    P D +C       +   L AFAELW N+  R+F ++ V+P  +    A R  R     WY ++   E L R   A             DE +   L P   LL T Y AVG+ ++   TM +F  AL M GL+WS  +   G+  E    +E    ++E  R A  +P +   L LDM LY+ AV V   Q+ + G+
Sbjct:   39 VMASRWKLLHGGCVESLRNHKGRS---CKWITIFRHPIARLLSAYDHCLGA-PKDPVCPPT----ESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVK---EYLARGGIA------------EDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 264          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103659.304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FS84_ECTSI4.800e-5338.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G715_ECTSI3.030e-5134.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JY77_9PHAE6.470e-4933.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G716_ECTSI3.930e-4632.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWQ3_ECTSI2.070e-4533.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQY7_9PHAE9.770e-4434.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L061_9PHAE3.120e-4036.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNJ0_9PHAE3.370e-3932.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM0_9PHAE1.230e-3131.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU75_ECTSI5.500e-3133.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103659contigH-elongata_contig103659:1082..2315 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score188.0
Seed ortholog evalue7.8e-45
Seed eggNOG ortholog2880.D7G715
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons1
Model size1234
Cds size1062
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103659.304.1prot_H-elongata_contig103659.304.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig103659 1138..2199 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929571.4688494-UTR-H-elongata_contig103659:1081..11371622929571.4688494-UTR-H-elongata_contig103659:1081..1137Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig103659 1082..1137 +
1691679075.3396964-UTR-H-elongata_contig103659:1081..11371691679075.3396964-UTR-H-elongata_contig103659:1081..1137Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig103659 1082..1137 +
1622929571.5072427-UTR-H-elongata_contig103659:2199..23151622929571.5072427-UTR-H-elongata_contig103659:2199..2315Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig103659 2200..2315 +
1691679075.3683953-UTR-H-elongata_contig103659:2199..23151691679075.3683953-UTR-H-elongata_contig103659:2199..2315Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig103659 2200..2315 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929571.4878104-CDS-H-elongata_contig103659:1137..21991622929571.4878104-CDS-H-elongata_contig103659:1137..2199Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig103659 1138..2199 +
1691679075.3587189-CDS-H-elongata_contig103659:1137..21991691679075.3587189-CDS-H-elongata_contig103659:1137..2199Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig103659 1138..2199 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig103659.304.1

>prot_H-elongata_contig103659.304.1 ID=prot_H-elongata_contig103659.304.1|Name=mRNA_H-elongata_contig103659.304.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=354bp
MPVPKALLRCASLALMACQGRSCVEDHLALSTPMCDHHARPPVPSADDCA
TTAAPMIDEGCWRYQGMPKAGSSTVLSILEGWGTRNNLAHARLTSDTLLS
PEEPRRILTGNYSLVTGGFTEALRSMGGGCGGGCKWFTVFRHPVSRLVSA
YYYCRHKNPSDQICGKELVDHDHVSLHAFAELWSNYGTREFVVSFVTPET
IMNSPAVRAVRAEVPGWYKIRLFAEELYRNQTAAESFAYEAPSGLHDEAM
EQFLRPAIELLRTYDAVGLLEDFDNTMRMFDAALGMPGLNWSEEFQKQGV
VNEGVNEVRAEQAETLRSAWTDPVLQRFLWLDMYLYDRAVAVHHKQMIRL
GLT*
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mRNA from alignment at H-elongata_contig103659:1082..2315+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig103659.304.1 ID=mRNA_H-elongata_contig103659.304.1|Name=mRNA_H-elongata_contig103659.304.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1234bp|location=Sequence derived from alignment at H-elongata_contig103659:1082..2315+ (Himanthalia elongata Himel1 dioecious)
CAGGTATTCGTCCCCGGAAAGAAAGTGGGAGAGCAGGAGAAGGGGGCGCG ATAAGCATGCCCGTCCCGAAGGCGCTACTTCGATGCGCCTCGCTCGCGCT GATGGCTTGCCAAGGGCGTTCCTGTGTCGAAGACCACCTCGCCCTAAGCA CGCCGATGTGCGATCACCACGCTAGACCTCCAGTACCCTCAGCTGACGAT TGCGCCACCACGGCGGCTCCCATGATCGACGAGGGGTGTTGGAGGTACCA AGGCATGCCGAAGGCGGGCAGCTCGACCGTGCTCAGCATCCTCGAGGGAT GGGGCACGAGAAACAACCTCGCGCACGCCAGGTTAACGTCGGACACCTTG CTGTCGCCAGAGGAGCCGCGAAGGATCCTGACCGGGAACTACTCGCTCGT GACAGGGGGTTTCACGGAGGCCTTGCGGTCTATGGGGGGTGGGTGCGGGG GCGGTTGCAAATGGTTCACCGTGTTTAGGCACCCCGTATCCCGGCTCGTG TCGGCCTACTACTACTGCAGGCACAAGAACCCCTCGGATCAGATCTGCGG GAAGGAGCTCGTCGACCACGACCACGTGAGCCTCCACGCCTTCGCCGAGC TCTGGAGCAACTACGGCACGCGAGAGTTCGTCGTGTCCTTTGTGACGCCC GAGACAATCATGAATTCTCCGGCCGTCCGAGCCGTCCGAGCCGAGGTTCC CGGCTGGTACAAGATCAGGCTCTTTGCGGAGGAGCTCTACCGTAACCAGA CGGCGGCCGAGTCCTTCGCCTACGAGGCTCCCTCGGGCTTGCATGACGAG GCCATGGAGCAGTTCCTGCGGCCGGCGATTGAGTTGCTAAGGACCTACGA CGCCGTGGGTCTGCTCGAAGACTTCGACAATACCATGCGGATGTTCGACG CGGCGTTGGGCATGCCGGGCCTGAACTGGAGCGAGGAGTTCCAGAAACAA GGCGTCGTCAACGAGGGGGTAAACGAAGTCCGGGCCGAGCAGGCGGAAAC GCTGAGGTCGGCGTGGACCGATCCCGTTCTGCAGAGGTTCCTCTGGCTCG ACATGTATCTCTACGACCGCGCCGTGGCTGTTCACCACAAGCAGATGATT CGGCTCGGGTTGACCTGAACGCTCTAAAACCTTTGAAGGCGAAGAGATTC CGTCCAGTACAGATTGATTTTGTTTATTTTTAGAGGGGGCCATTCATCGT GTGTTATTCGAGGCGCATTTTTATGAGGGTGTCG
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Coding sequence (CDS) from alignment at H-elongata_contig103659:1082..2315+

>mRNA_H-elongata_contig103659.304.1 ID=mRNA_H-elongata_contig103659.304.1|Name=mRNA_H-elongata_contig103659.304.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2124bp|location=Sequence derived from alignment at H-elongata_contig103659:1082..2315+ (Himanthalia elongata Himel1 dioecious)
ATGCCCGTCCCGAAGGCGCTACTTCGATGCGCCTCGCTCGCGCTGATGGC
TTGCCAAGGGCGTTCCTGTGTCGAAGACCACCTCGCCCTAAGCACGCCGA
TGTGCGATCACCACGCTAGACCTCCAGTACCCTCAGCTGACGATTGCGCC
ACCACGGCGGCTCCCATGATCGACGAGGGGTGTTGGAGGTACCAAGGCAT
GCCGAAGGCGGGCAGCTCGACCGTGCTCAGCATCCTCGAGGGATGGGGCA
CGAGAAACAACCTCGCGCACGCCAGGTTAACGTCGGACACCTTGCTGTCG
CCAGAGGAGCCGCGAAGGATCCTGACCGGGAACTACTCGCTCGTGACAGG
GGGTTTCACGGAGGCCTTGCGGTCTATGGGGGGTGGGTGCGGGGGCGGTT
GCAAATGGTTCACCGTGTTTAGGCACCCCGTATCCCGGCTCGTGTCGGCC
TACTACTACTGCAGGCACAAGAACCCCTCGGATCAGATCTGCGGGAAGGA
GCTCGTCGACCACGACCACGTGAGCCTCCACGCCTTCGCCGAGCTCTGGA
GCAACTACGGCACGCGAGAGTTCGTCGTGTCCTTTGTGACGCCCGAGACA
ATCATGAATTCTCCGGCCGTCCGAGCCGTCCGAGCCGAGGTTCCCGGCTG
GTACAAGATCAGGCTCTTTGCGGAGGAGCTCTACCGTAACCAGACGGCGG
CCGAGTCCTTCGCCTACGAGGCTCCCTCGGGCTTGCATGACGAGGCCATG
GAGCAGTTCCTGCGGCCGGCGATTGAGTTGCTAAGGACCTACGACGCCGT
GGGTCTGCTCGAAGACTTCGACAATACCATGCGGATGTTCGACGCGGCGT
TGGGCATGCCGGGCCTGAACTGGAGCGAGGAGTTCCAGAAACAAGGCGTC
GTCAACGAGGGGGTAAACGAAGTCCGGGCCGAGCAGGCGGAAACGCTGAG
GTCGGCGTGGACCGATCCCGTTCTGCAGAGGTTCCTCTGGCTCGACATGT
ATCTCTACGACCGCGCCGTGGCTGTTCACCACAAGCAGATGATTCGGCTC
GGGTTGACCTGAATGCCCGTCCCGAAGGCGCTACTTCGATGCGCCTCGCT
CGCGCTGATGGCTTGCCAAGGGCGTTCCTGTGTCGAAGACCACCTCGCCC
TAAGCACGCCGATGTGCGATCACCACGCTAGACCTCCAGTACCCTCAGCT
GACGATTGCGCCACCACGGCGGCTCCCATGATCGACGAGGGGTGTTGGAG
GTACCAAGGCATGCCGAAGGCGGGCAGCTCGACCGTGCTCAGCATCCTCG
AGGGATGGGGCACGAGAAACAACCTCGCGCACGCCAGGTTAACGTCGGAC
ACCTTGCTGTCGCCAGAGGAGCCGCGAAGGATCCTGACCGGGAACTACTC
GCTCGTGACAGGGGGTTTCACGGAGGCCTTGCGGTCTATGGGGGGTGGGT
GCGGGGGCGGTTGCAAATGGTTCACCGTGTTTAGGCACCCCGTATCCCGG
CTCGTGTCGGCCTACTACTACTGCAGGCACAAGAACCCCTCGGATCAGAT
CTGCGGGAAGGAGCTCGTCGACCACGACCACGTGAGCCTCCACGCCTTCG
CCGAGCTCTGGAGCAACTACGGCACGCGAGAGTTCGTCGTGTCCTTTGTG
ACGCCCGAGACAATCATGAATTCTCCGGCCGTCCGAGCCGTCCGAGCCGA
GGTTCCCGGCTGGTACAAGATCAGGCTCTTTGCGGAGGAGCTCTACCGTA
ACCAGACGGCGGCCGAGTCCTTCGCCTACGAGGCTCCCTCGGGCTTGCAT
GACGAGGCCATGGAGCAGTTCCTGCGGCCGGCGATTGAGTTGCTAAGGAC
CTACGACGCCGTGGGTCTGCTCGAAGACTTCGACAATACCATGCGGATGT
TCGACGCGGCGTTGGGCATGCCGGGCCTGAACTGGAGCGAGGAGTTCCAG
AAACAAGGCGTCGTCAACGAGGGGGTAAACGAAGTCCGGGCCGAGCAGGC
GGAAACGCTGAGGTCGGCGTGGACCGATCCCGTTCTGCAGAGGTTCCTCT
GGCTCGACATGTATCTCTACGACCGCGCCGTGGCTGTTCACCACAAGCAG
ATGATTCGGCTCGGGTTGACCTGA
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