Homology
BLAST of mRNA_H-elongata_contig103625.302.1 vs. uniprot
Match:
D7FTR7_ECTSI (Cathepsin L-like proteinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTR7_ECTSI)
HSP 1 Score: 182 bits (462), Expect = 1.650e-49
Identity = 84/99 (84.85%), Postives = 92/99 (92.93%), Query Frame = 3
Query: 135 QGLMAAVAQQPISVAIEADEMNFQLYSGGVLTAECGTNLDHGVLLVGYGVSEDGVKYWKIKNSWGADWGVDGYILIKREAPQEGGECGILMQASYPVLA 431
Q LM AVAQQP+S+AIEAD+M+FQLYSGGVLTA CGTNLDHGVLLVGYGVSEDGVKYWK+KNSWG +WG +GYIL+KREA QEGGECGIL QASYPVLA
Sbjct: 377 QALMEAVAQQPVSIAIEADQMSFQLYSGGVLTAACGTNLDHGVLLVGYGVSEDGVKYWKVKNSWGPEWGAEGYILLKREADQEGGECGILEQASYPVLA 475
BLAST of mRNA_H-elongata_contig103625.302.1 vs. uniprot
Match:
A0A7S2GCU1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCU1_9STRA)
HSP 1 Score: 149 bits (377), Expect = 1.950e-38
Identity = 66/98 (67.35%), Postives = 80/98 (81.63%), Query Frame = 3
Query: 135 QGLMAAVAQQPISVAIEADEMNFQLYSGGVLTAECGTNLDHGVLLVGYGVSEDGVKYWKIKNSWGADWGVDGYILIKREAPQEGGECGILMQASYPVL 428
+ LM+AVAQQP+SVAI+A++++FQLYS GVLT CGT+LDHGVL GYG DG YWK+KNSWG+ WG+DGYILI+R Q GG+CGILM ASYP L
Sbjct: 239 EALMSAVAQQPVSVAIQANQLSFQLYSSGVLTGRCGTSLDHGVLAAGYGTYTDGTDYWKVKNSWGSSWGMDGYILIERGNSQTGGQCGILMSASYPTL 336
BLAST of mRNA_H-elongata_contig103625.302.1 vs. uniprot
Match:
A0A835ZFS5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFS5_9STRA)
HSP 1 Score: 149 bits (377), Expect = 2.920e-38
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 3
Query: 132 LQGLMAAVAQQPISVAIEADEMNFQLYSGGVLTAECGTNLDHGVLLVGYGVSEDGVKYWKIKNSWGADWGVDGYILIKREAPQEGGECGILMQASYPVL 428
++ LM AV +QP+SVAIEADE FQ YSGGVL CGT+LDHGVLLVGYG +EDGV YW +KNSWG WG GYI + R APQEGGECGIL ASYPVL
Sbjct: 254 MKSLMKAVKKQPVSVAIEADESAFQFYSGGVLMNGCGTSLDHGVLLVGYGTTEDGVDYWTLKNSWGPSWGDAGYIRVLRGAPQEGGECGILQSASYPVL 352
BLAST of mRNA_H-elongata_contig103625.302.1 vs. uniprot
Match:
A0A7S2G3J8_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2G3J8_9DINO)
HSP 1 Score: 137 bits (345), Expect = 5.680e-36
Identity = 65/104 (62.50%), Postives = 81/104 (77.88%), Query Frame = 3
Query: 135 QGLMAAVAQQPISVAIEADEMNFQLYSGGVLTAECGTNLDHGVLLVGYGVSEDGVKYWKIKNSWGADWGVDGYILIKREAPQEGGECGILMQASYPVLA*TSLE 446
+ L+ AVAQQP+SVAIEAD+ FQLY+GG+L ECGT LDHGVLLVGYG +E+GV YWK+KNSWG WG +GYI + R P++G ECGI Q +YP++ SLE
Sbjct: 20 EALLEAVAQQPVSVAIEADQTAFQLYTGGILQKECGTKLDHGVLLVGYG-TENGVDYWKVKNSWGPSWGENGYIRLMRGLPKDG-ECGIKDQPTYPIVKKPSLE 121
BLAST of mRNA_H-elongata_contig103625.302.1 vs. uniprot
Match:
A0A7S2XZA5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZA5_9STRA)
HSP 1 Score: 142 bits (358), Expect = 1.090e-35
Identity = 63/97 (64.95%), Postives = 78/97 (80.41%), Query Frame = 3
Query: 138 GLMAAVAQQPISVAIEADEMNFQLYSGGVLTAECGTNLDHGVLLVGYGVSEDGVKYWKIKNSWGADWGVDGYILIKREAPQEGGECGILMQASYPVL 428
LM AV +QP+++AIEAD+ +FQ YS GV T CGTNLDHGVLLVGYG SEDG YWK+KNSWG WG +G+IL+ + QEGG+CG+L+Q+SYPVL
Sbjct: 239 ALMQAVNRQPVAIAIEADQFSFQFYSSGVFTGSCGTNLDHGVLLVGYG-SEDGQDYWKVKNSWGESWGQNGFILLGKNVEQEGGQCGLLLQSSYPVL 334
BLAST of mRNA_H-elongata_contig103625.302.1 vs. uniprot
Match:
A0A835D806_9MAGN (Pept_C1 domain-containing protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835D806_9MAGN)
HSP 1 Score: 134 bits (338), Expect = 9.830e-35
Identity = 59/97 (60.82%), Postives = 72/97 (74.23%), Query Frame = 3
Query: 135 QGLMAAVAQQPISVAIEADEMNFQLYSGGVLTAECGTNLDHGVLLVGYGVSEDGVKYWKIKNSWGADWGVDGYILIKREAPQEGGECGILMQASYPV 425
+ L+ AVA QP+SVAI+A +FQ YS GV T ECGT+LDHGV VGYG S DG KYW +KNSWG +WGVDGYI+++R+ G CGI M+ASYP
Sbjct: 64 KALLKAVANQPVSVAIDASGSDFQFYSSGVFTGECGTSLDHGVTAVGYGTSADGTKYWLVKNSWGTEWGVDGYIMMQRDVDASEGLCGIAMEASYPT 160
BLAST of mRNA_H-elongata_contig103625.302.1 vs. uniprot
Match:
A0A2P6RUD4_ROSCH (Putative fruit bromelain n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RUD4_ROSCH)
HSP 1 Score: 132 bits (331), Expect = 7.590e-34
Identity = 59/96 (61.46%), Postives = 72/96 (75.00%), Query Frame = 3
Query: 138 GLMAAVAQQPISVAIEADEMNFQLYSGGVLTAECGTNLDHGVLLVGYGVSEDGVKYWKIKNSWGADWGVDGYILIKREAPQEGGECGILMQASYPV 425
L+ AVA QPISVAI+A +FQ YS GV T CGT+LDHGV VGYGVS+DG KYW +KNSWGA+WG +GYI ++R+ + G CGI M+ASYP
Sbjct: 54 ALLKAVANQPISVAIDASGSDFQFYSSGVFTGTCGTSLDHGVTAVGYGVSDDGTKYWLVKNSWGAEWGEEGYIRMQRDVAAQEGLCGIAMEASYPT 149
BLAST of mRNA_H-elongata_contig103625.302.1 vs. uniprot
Match:
UPI000D62AFD0 (KDEL-tailed cysteine endopeptidase CEP1-like n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62AFD0)
HSP 1 Score: 130 bits (327), Expect = 8.080e-34
Identity = 57/96 (59.38%), Postives = 70/96 (72.92%), Query Frame = 3
Query: 138 GLMAAVAQQPISVAIEADEMNFQLYSGGVLTAECGTNLDHGVLLVGYGVSEDGVKYWKIKNSWGADWGVDGYILIKREAPQEGGECGILMQASYPV 425
L+ AV+ QP+SVAI+A +FQ YS GV T ECGT LDHGV VGYG SE+G KYW +KNSWG WG +GYI+++R+ + G CGI MQASYP
Sbjct: 11 ALLKAVSSQPVSVAIDASGSDFQFYSSGVFTGECGTELDHGVTAVGYGTSEEGTKYWLVKNSWGTSWGEEGYIMMQRDVDAKEGLCGIAMQASYPT 106
BLAST of mRNA_H-elongata_contig103625.302.1 vs. uniprot
Match:
A0A835YQ83_9STRA (Cathepsin L-like proteinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ83_9STRA)
HSP 1 Score: 141 bits (355), Expect = 8.930e-34
Identity = 65/102 (63.73%), Postives = 78/102 (76.47%), Query Frame = 3
Query: 138 GLMAAVAQQPISVAIEADEMNFQLYSGGVLTAECGTNLDHGVLLVGYGVSEDGVKYWKIKNSWGADWGVDGYILIKREAPQE----GGECGILMQASYPVLA 431
+M AVA++P++VAIEAD+M FQ YSGGV A CGT LDHGV+LVGYG +DG YWK+KNSWG WG+DGYIL++R A GGECG+LM A YPVLA
Sbjct: 260 SVMRAVARRPLAVAIEADQMAFQFYSGGVFAAPCGTELDHGVVLVGYGTDDDGNDYWKVKNSWGPSWGLDGYILLQRGAAANAGGSGGECGVLMDAIYPVLA 361
BLAST of mRNA_H-elongata_contig103625.302.1 vs. uniprot
Match:
A0A834ZY22_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834ZY22_9MAGN)
HSP 1 Score: 135 bits (339), Expect = 1.020e-33
Identity = 59/97 (60.82%), Postives = 72/97 (74.23%), Query Frame = 3
Query: 135 QGLMAAVAQQPISVAIEADEMNFQLYSGGVLTAECGTNLDHGVLLVGYGVSEDGVKYWKIKNSWGADWGVDGYILIKREAPQEGGECGILMQASYPV 425
+ L+ AVA QP+SVAI+A +FQ YS GV T ECGT+LDHGV VGYG S DG KYW +KNSWG +WGVDGYI+++R+ G CGI M+ASYP
Sbjct: 161 KALLKAVANQPVSVAIDASGSDFQFYSSGVFTGECGTSLDHGVTAVGYGTSADGTKYWLVKNSWGTEWGVDGYIMMQRDVDASEGVCGIAMEASYPT 257
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103625.302.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.65e-49 / Id = 84.85 Expect = 1.95e-38 / Id = 67.35 Expect = 2.92e-38 / Id = 70.71 Expect = 5.68e-36 / Id = 62.50 Expect = 1.09e-35 / Id = 64.95 Expect = 9.83e-35 / Id = 60.82 Expect = 7.59e-34 / Id = 61.46 Expect = 8.08e-34 / Id = 59.38 Expect = 8.93e-34 / Id = 63.73 Expect = 1.02e-33 / Id = 60.82 Sequence D7FTR7_ECTSI A0A7S2GCU1_9STRA A0A835ZFS5_9STRA A0A7S2G3J8_9DINO A0A7S2XZA5_9STRA A0A835D806_9MAGN A0A2P6RUD4_ROSCH UPI000D62AFD0 A0A835YQ83_9STRA A0A834ZY22_9MAGN Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Viridiplantae Seed ortholog score 133.3 Seed ortholog evalue 6.6e-29 Seed eggNOG ortholog 71139.XP_010045986.1 KEGG ko ko:K01365 KEGG Pathway ko04140,ko04142,ko04145,ko04210,ko04612,ko05205,ko05323,ko05418,map04140,map04142,map04145,map04210,map04612,map05205,map05323,map05418 GOs GO:0000003,GO:0000323,GO:0000325,GO:0002376,GO:0003006,GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0005575,GO:0005576,GO:0005615,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005783,GO:0006508,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0007275,GO:0008150,GO:0008152,GO:0008219,GO:0008233,GO:0008234,GO:0009056,GO:0009057,GO:0009505,GO:0009555,GO:0009605,GO:0009607,GO:0009620,GO:0009626,GO:0009791,GO:0009908,GO:0009987,GO:0010623,GO:0012501,GO:0012505,GO:0016787,GO:0019538,GO:0022414,GO:0030154,GO:0030163,GO:0030312,GO:0032501,GO:0032502,GO:0033554,GO:0034050,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0045087,GO:0048229,GO:0048367,GO:0048437,GO:0048438,GO:0048443,GO:0048466,GO:0048468,GO:0048608,GO:0048653,GO:0048658,GO:0048731,GO:0048827,GO:0048856,GO:0048869,GO:0050832,GO:0050896,GO:0051603,GO:0051704,GO:0051707,GO:0051716,GO:0061458,GO:0070011,GO:0071704,GO:0071944,GO:0090567,GO:0098542,GO:0099402,GO:0140096,GO:1901564,GO:1901565,GO:1901575 EggNOG free text desc. Belongs to the peptidase C1 family EggNOG OGs 37RR0@33090,3GCD2@35493,COG4870@1,KOG1543@2759 EC 3.4.22.15 COG Functional cat. O Best tax level Streptophyta Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00537,ko01000,ko01002,ko03110 Hectar predicted targeting category other localisation Exons 3 Model size 1114 Cds size 306 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622929571.2362058-UTR-H-elongata_contig103625:309..989 1622929571.2362058-UTR-H-elongata_contig103625:309..989 Himanthalia elongata Himel1 dioecious UTR H-elongata_contig103625 310..989 - 1691679075.248238-UTR-H-elongata_contig103625:309..989 1691679075.248238-UTR-H-elongata_contig103625:309..989 Himanthalia elongata Himel1 dioecious UTR H-elongata_contig103625 310..989 - 1622929571.317285-UTR-H-elongata_contig103625:2135..2263 1622929571.317285-UTR-H-elongata_contig103625:2135..2263 Himanthalia elongata Himel1 dioecious UTR H-elongata_contig103625 2136..2263 - 1691679075.2950895-UTR-H-elongata_contig103625:2135..2263 1691679075.2950895-UTR-H-elongata_contig103625:2135..2263 Himanthalia elongata Himel1 dioecious UTR H-elongata_contig103625 2136..2263 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622929571.2553966-CDS-H-elongata_contig103625:989..1112 1622929571.2553966-CDS-H-elongata_contig103625:989..1112 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig103625 990..1112 - 1691679075.26455-CDS-H-elongata_contig103625:989..1112 1691679075.26455-CDS-H-elongata_contig103625:989..1112 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig103625 990..1112 - 1622929571.2804801-CDS-H-elongata_contig103625:1434..1551 1622929571.2804801-CDS-H-elongata_contig103625:1434..1551 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig103625 1435..1551 - 1691679075.2791305-CDS-H-elongata_contig103625:1434..1551 1691679075.2791305-CDS-H-elongata_contig103625:1434..1551 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig103625 1435..1551 - 1622929571.2973027-CDS-H-elongata_contig103625:2069..2135 1622929571.2973027-CDS-H-elongata_contig103625:2069..2135 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig103625 2070..2135 - 1691679075.2871213-CDS-H-elongata_contig103625:2069..2135 1691679075.2871213-CDS-H-elongata_contig103625:2069..2135 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig103625 2070..2135 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig103625.302.1
>prot_H-elongata_contig103625.302.1 ID=prot_H-elongata_contig103625.302.1|Name=mRNA_H-elongata_contig103625.302.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
MLQGLMAAVAQQPISVAIEADEMNFQLYSGGVLTAECGTNLDHGVLLVGY back to top mRNA from alignment at H-elongata_contig103625:310..2263-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig103625.302.1 ID=mRNA_H-elongata_contig103625.302.1|Name=mRNA_H-elongata_contig103625.302.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1954bp|location=Sequence derived from alignment at H-elongata_contig103625:310..2263- (Himanthalia elongata Himel1 dioecious)AGCTTGTGTATGACCTCGAGCCCCTAAACGCCTTTTGCGTTTCTGCTCCA
CGTCTTACACCGTCTTTACACGCATCAATACCGTGTGCCGTCTACCGTCT
GTGGCTTTATGATAATTAACGATGAATT ATGTTACAGGGGCTGATGGCGG
CGGTTGCACAGCAGCCCATTTCCGTGGCCATCGAGGCTGATGAG GTCAGA
GAACTTCGACATTGTTAGCAGTCCCGCGCCCGCCGTTTAACATTGCCAGT
TCTGCCAGCGATAGGGACGTCGATTGCCTCGTGATTGCCTCGTCCCTCAA
TTTGCGATAGGGACGTCGATTATCAAATATTAGATGTTTTTTCTTATTGT
TTATATTGTTTTTATTAATGATATTGTAATATTGTTTTATTATTAATTAT
TAATTATTATTACTGTTATTATTGTCCTCTAGGAAAAATAACGACCCTAA
CGAGGATCCCCGAGAGCCACCTTTCATCATATTGCATATTGCATATTGGT
GGTGACTCCTTTATCCATACCCGCAATTCCTTTGTCCAGTCGGCCCCGTT
AACTTTACCGTTATCGTTACCATTATCGTTATCGTTACCGTTACCGTTAC
CATTATCGTTACCGTTACCATTATCGTTACCGTTATCGTTACCGTTATCG
TTACCATTATCGTTATCGTTACCATTATCGTTATCGTTACCATTACCATC
TACGGTGCGCAGATGAACTTCCAGCTCTACTCTGGCGGTGTTCTTACGGC
GGAGTGTGGCACGAACCTTGACCACGGTGTTCTCCTGGTGGGATACGGTG
TCTCCGAGGACGGGGTCAAGTACTGGAAG GTGCGAAGAAGTTGGCGCAGC
GTGTGGCGATTCTTGCGGTTGATTTTGGTCGGTTAGTCGATTTTGGTCGG
TATGTCGATTGCAAGATTCACCGTGATGTAGAGCGAAGTGCGTGCTGCGC
GTGCGGTTATAAAACCATAATATATATATATATAGGGCAAATGCTTAATG
ATCTTCCTAGATGTTTTCTCCCCCTCCCATCCTGAATGATCCTGGATGAT
CCTGTAGACTTTGGGACGTCCGATCGCGTATTTTGTGCCTCGTTATACCC
AGTGATTCTGATCGCTTAACCTTGTTTGGTGTCCTGCTTCGATCCTCGTA
GATCAAGAACTCGTGGGGCGCGGACTGGGGCGTAGACGGTTACATTCTCA
TCAAGCGCGAGGCCCCGCAGGAGGGTGGAGAGTGCGGTATCCTTATGCAG
GCGTCGTACCCCGTCCTCGCCTAA ACGTCGCTCGAGGGGGATTGATTCTC
AGGGCAATAAGCGGAGTAACTTACGAACGGAAGAGGGATCGTGTGCCGTA
CGCCGCCTTTCACAATCGTCAGCCGTAATGTTGTTGTCGGCTTTAACTTT
TTCTGAAAGTGTGTTGGACTCCAAGATAACATGATGTAATATGGTGTAAT
GGGCTATCCCGGAAACAGCGGAGGTCGAGGGGGGATAAGCGTTTTGTAAA
ATATATGTGAATAAGAAAAATATATCAGTATATCAGCAAAGAAGCATCCT
AGTAATAGTATCAATATTGATGGGTCAGGAAGAAAGGGGCAGGGAGGGAG
GGGTGGACTTTTCGGGACCGAGCATTTTGGTTTTGATGATTTGATTATTT
ATGACATCGTCTAGTCTTCGGGTTTTGATACCACAGCAGGCTTTTTGACA
TAAGGCAATCAAGACTTATGGTCCTCTGAGGGGGAGTGGTACATAAAGAT
AGGCCTTATTATGCTGATTTCCGTAAGGGTATAAGACTGACGATATAAAA
ATATATTTCTGTGAAATACAAGCTGAATAACGTACGCCAATTTCCCCGCG
ACAAGCCTTCAAGATAATATAGTGCCGAGTTGGTTCGAGTTTGTTCTGTA
ATTCTTCGGGATAAGACCCCATCTACTACTACTACTCCACCCTCTTGTCC
TCTC back to top Coding sequence (CDS) from alignment at H-elongata_contig103625:310..2263-
>mRNA_H-elongata_contig103625.302.1 ID=mRNA_H-elongata_contig103625.302.1|Name=mRNA_H-elongata_contig103625.302.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=612bp|location=Sequence derived from alignment at H-elongata_contig103625:310..2263- (Himanthalia elongata Himel1 dioecious) back to top