mRNA_H-elongata_contig10335.278.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig10335.278.1 vs. uniprot
Match: D7FS15_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS15_ECTSI) HSP 1 Score: 217 bits (552), Expect = 5.380e-70 Identity = 104/148 (70.27%), Postives = 120/148 (81.08%), Query Frame = 1 Query: 25 KRVIGGMRGVHAITGCIFLCTLTCYIERMGFPIAFTEIARAEGLNETVKGTVLSSFFYGYAVMQLPGSWLSARYGGTRILGLSFALWGGISLFTPG-IHKGGTFFFVATRVVMGASQGLYIPAAHTLLAQWVPVHERSRLVTLAMSGM 465 RVI G+R VH I IF CTL CY ERMGF IAFTE+A++ LNE KGTV+S+FFYGYAVMQLPG WLSAR+GG RILGLSFALWG IS+ PG +H G T +A RV +GASQG++IPA+HTLLA+W+PVHERSRLVTLAMSGM Sbjct: 8 SRVIWGLRDVHVIVSMIFACTLACYFERMGFSIAFTELAKSASLNEADKGTVMSAFFYGYAVMQLPGGWLSARHGGARILGLSFALWGSISMVMPGTVHDGSTTILMACRVAIGASQGMFIPASHTLLAKWIPVHERSRLVTLAMSGM 155
BLAST of mRNA_H-elongata_contig10335.278.1 vs. uniprot
Match: A0A6H5KI05_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI05_9PHAE) HSP 1 Score: 207 bits (528), Expect = 1.020e-65 Identity = 100/148 (67.57%), Postives = 115/148 (77.70%), Query Frame = 1 Query: 25 KRVIGGMRGVHAITGCIFLCTLTCYIERMGFPIAFTEIARAEGLNETVKGTVLSSFFYGYAVMQLPGSWLSARYGGTRILGLSFALWGGISLFTPG-IHKGGTFFFVATRVVMGASQGLYIPAAHTLLAQWVPVHERSRLVTLAMSGM 465 RVI G+R VH I IF CTL CY ERMGF IAFTE+A + L E GT +S+F+YGYAVMQLP WLSARYGG RILGLSFALWG IS+ PG +H G T +A RV +GASQGL+IPA+HTLLA+W+PVHERSRLVTLAMSG+ Sbjct: 8 SRVIWGLRDVHVIVSMIFACTLACYFERMGFSIAFTELANSASLKEADMGTAMSAFYYGYAVMQLPAGWLSARYGGARILGLSFALWGSISMVMPGTVHDGSTTILMACRVAIGASQGLFIPASHTLLAKWIPVHERSRLVTLAMSGI 155
BLAST of mRNA_H-elongata_contig10335.278.1 vs. uniprot
Match: A0A2P6TP31_CHLSO (Putative anion transporter 5 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TP31_CHLSO) HSP 1 Score: 149 bits (376), Expect = 6.600e-40 Identity = 76/159 (47.80%), Postives = 99/159 (62.26%), Query Frame = 1 Query: 4 TVNTSGSKRVIGGMRGV-----HAITGCIFLCTLTCYIERMGFPIAFTEIARAEGLNETVKGTVLSSFFYGYAVMQLPGSWLSARYGGTRILGLSFALWGGISLFTPGIHKGGTFFFVATRVVMGASQGLYIPAAHTLLAQWVPVHERSRLVTLAMSGM 465 T + GG RGV H + C FL T+T Y+ER+GF IAFT +A G+ E +KG VLS+F++GYA+ Q+PG W + RYGG R+L SFALW + L TPG G T A RV +G +QG IPA HT+LA W+P ER+R V+L SG+ Sbjct: 23 TPQPGAGRAAAGGKRGVLEPRFHIVLAC-FLATVTIYVERVGFSIAFTAMASKVGVEEGLKGAVLSAFYWGYAISQVPGGWAAQRYGGERVLSWSFALWSAVVLLTPG-SAGNTKLMAAVRVGVGFAQGFVIPAVHTVLAGWIPPSERARAVSLTTSGL 179
BLAST of mRNA_H-elongata_contig10335.278.1 vs. uniprot
Match: D8U1X0_VOLCA (MFS domain-containing protein n=3 Tax=Volvox TaxID=3066 RepID=D8U1X0_VOLCA) HSP 1 Score: 146 bits (369), Expect = 2.920e-39 Identity = 69/137 (50.36%), Postives = 96/137 (70.07%), Query Frame = 1 Query: 55 HAITGCIFLCTLTCYIERMGFPIAFTEIARAEGLNETVKGTVLSSFFYGYAVMQLPGSWLSARYGGTRILGLSFALWGGISLFTPGIHKGGTFFFVATRVVMGASQGLYIPAAHTLLAQWVPVHERSRLVTLAMSGM 465 + I FL T T Y+ER+GF IAFT++A+ G++ETVKGTVLS+F++GYA+ Q+PG W + +YGG +L L FA W S+FTP + + +A RV +G +QG IPA HT+L+QW+P HER+R V+L SGM Sbjct: 8 YVIVLATFLATFTAYVERVGFSIAFTDLAKEAGIDETVKGTVLSAFYWGYALSQIPGGWAAQQYGGRLMLLLCFACWSAASIFTPTNARHASAIILA-RVAVGVAQGFLIPAVHTVLSQWIPPHERARAVSLTTSGM 143
BLAST of mRNA_H-elongata_contig10335.278.1 vs. uniprot
Match: A0A2K3DEV9_CHLRE (MFS domain-containing protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DEV9_CHLRE) HSP 1 Score: 145 bits (366), Expect = 8.760e-39 Identity = 73/155 (47.10%), Postives = 101/155 (65.16%), Query Frame = 1 Query: 1 MTVNTSGSKRVIGGMRGVHAITGCIFLCTLTCYIERMGFPIAFTEIARAEGLNETVKGTVLSSFFYGYAVMQLPGSWLSARYGGTRILGLSFALWGGISLFTPGIHKGGTFFFVATRVVMGASQGLYIPAAHTLLAQWVPVHERSRLVTLAMSGM 465 MTV T R+ + I FL T T Y+ER+GF IAFT++A+ G++E+VKG VLS+F++GYA+ Q+PG W + +YGG +L L FA W S+ TP + T+ VA RV +G +QG IPA HT+L+QW+P HER+R V+L SGM Sbjct: 1 MTVATRSRYRI----EPRYVIVLATFLATFTAYVERVGFSIAFTDLAKEAGVDESVKGAVLSAFYWGYALSQIPGGWAAQQYGGRIMLLLCFASWSAASILTP-TNARHTYAIVAARVAVGVAQGFLIPAVHTVLSQWIPPHERARAVSLTTSGM 150
BLAST of mRNA_H-elongata_contig10335.278.1 vs. uniprot
Match: A0A2J8A4N2_9CHLO (Putative anion transporter 7 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A4N2_9CHLO) HSP 1 Score: 145 bits (366), Expect = 9.220e-39 Identity = 69/137 (50.36%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 55 HAITGCIFLCTLTCYIERMGFPIAFTEIARAEGLNETVKGTVLSSFFYGYAVMQLPGSWLSARYGGTRILGLSFALWGGISLFTPGIHKGGTFFFVATRVVMGASQGLYIPAAHTLLAQWVPVHERSRLVTLAMSGM 465 H I FL T T Y+ER+GF IAFT++A+ G++E VKG VLS+F++GYA+ Q+PG W + +YGG +L L FA W +S+ TP + T VA RV +G +QG IPA HT+L+QW+P HER+R V+L SGM Sbjct: 16 HVIILATFLATFTAYVERVGFSIAFTDLAKEAGIDEAVKGKVLSAFYWGYALSQIPGGWAAQQYGGRIMLLLCFASWSAVSILTP-TNARHTAAIVAARVCVGVAQGFLIPAVHTVLSQWIPPHERARAVSLTTSGM 151
BLAST of mRNA_H-elongata_contig10335.278.1 vs. uniprot
Match: A0A2V0PH18_9CHLO (Anion transporter-like n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PH18_9CHLO) HSP 1 Score: 145 bits (367), Expect = 1.480e-38 Identity = 70/137 (51.09%), Postives = 89/137 (64.96%), Query Frame = 1 Query: 55 HAITGCIFLCTLTCYIERMGFPIAFTEIARAEGLNETVKGTVLSSFFYGYAVMQLPGSWLSARYGGTRILGLSFALWGGISLFTPGIHKGGTFFFVATRVVMGASQGLYIPAAHTLLAQWVPVHERSRLVTLAMSGM 465 + I FL T Y+ER+GF IAFTE+A+A G E +KG VLS+F++GY V Q+PG W + YGG +L LSFALW SL TP GT RV +G +QG IPA HT+L+QW+P HER+R V+L SGM Sbjct: 52 YLIVAACFLATFVAYVERVGFSIAFTEMAKAAGAGEALKGEVLSAFYWGYGVSQIPGGWAAQIYGGRAMLALSFALWSVASLLTPAAAAFGTVGVCVARVCVGVAQGGLIPAVHTVLSQWIPPHERARAVSLTTSGM 188
BLAST of mRNA_H-elongata_contig10335.278.1 vs. uniprot
Match: A0A835XG38_9CHLO (MFS domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XG38_9CHLO) HSP 1 Score: 144 bits (363), Expect = 2.530e-38 Identity = 74/155 (47.74%), Postives = 101/155 (65.16%), Query Frame = 1 Query: 1 MTVNTSGSKRVIGGMRGVHAITGCIFLCTLTCYIERMGFPIAFTEIARAEGLNETVKGTVLSSFFYGYAVMQLPGSWLSARYGGTRILGLSFALWGGISLFTPGIHKGGTFFFVATRVVMGASQGLYIPAAHTLLAQWVPVHERSRLVTLAMSGM 465 MTV +S R+ + I F T T Y+ER+GF IAFT++A+ G++E+VKGTVLS+F++GYA+ Q+PG W + RYGG +L L FA W IS+ TP + TF RV +G +QG IPA HT+L+QW+P HER+R V+L SGM Sbjct: 1 MTVASSRRYRI----EPRYVIVFATFFATFTAYVERVGFSIAFTDLAKVSGIDESVKGTVLSAFYWGYALSQIPGGWAAQRYGGRIMLILCFASWSLISILTPTDARH-TFAISMARVCVGIAQGFLIPAVHTVLSQWIPPHERARAVSLTTSGM 150
BLAST of mRNA_H-elongata_contig10335.278.1 vs. uniprot
Match: A0A150G433_GONPE (MFS domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G433_GONPE) HSP 1 Score: 142 bits (359), Expect = 8.940e-38 Identity = 67/137 (48.91%), Postives = 95/137 (69.34%), Query Frame = 1 Query: 55 HAITGCIFLCTLTCYIERMGFPIAFTEIARAEGLNETVKGTVLSSFFYGYAVMQLPGSWLSARYGGTRILGLSFALWGGISLFTPGIHKGGTFFFVATRVVMGASQGLYIPAAHTLLAQWVPVHERSRLVTLAMSGM 465 + I FL T T Y+ER+GF IAFT++A+ G++E+VKGTVLS+F++GYA+ Q+PG W + +YGG +L L FA W +S+ TP + T + RV +G +QG IPA HT+L+QW+P HER+R V+L SGM Sbjct: 16 YVIVLATFLATFTAYVERVGFSIAFTDLAKEAGIDESVKGTVLSAFYWGYALSQIPGGWAAQQYGGRIMLLLCFASWSLVSILTP-TNARHTLAIIFARVCIGVAQGFLIPAVHTVLSQWIPPHERARAVSLTTSGM 151
BLAST of mRNA_H-elongata_contig10335.278.1 vs. uniprot
Match: A0A5N6LN47_9ASTR (MFS domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LN47_9ASTR) HSP 1 Score: 142 bits (359), Expect = 1.330e-37 Identity = 67/130 (51.54%), Postives = 89/130 (68.46%), Query Frame = 1 Query: 76 FLCTLTCYIERMGFPIAFTEIARAEGLNETVKGTVLSSFFYGYAVMQLPGSWLSARYGGTRILGLSFALWGGISLFTPGIHKGGTFFFVATRVVMGASQGLYIPAAHTLLAQWVPVHERSRLVTLAMSGM 465 FLCT CYIER+GF IA+T A AEG++++ KGT+LS+F+YGYA+ Q+PG W + + GG R+L LSF LW P + F + R+++G SQG P+ HT+LAQWVP HERSR V+L SGM Sbjct: 17 FLCTSVCYIERVGFSIAYTVAADAEGVSQSSKGTILSTFYYGYALSQVPGGWAAQKIGGRRVLLLSFVLWSLTCALVP-LDPNRVFILIMARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGM 145 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10335.278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10335.278.1 >prot_H-elongata_contig10335.278.1 ID=prot_H-elongata_contig10335.278.1|Name=mRNA_H-elongata_contig10335.278.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp MTVNTSGSKRVIGGMRGVHAITGCIFLCTLTCYIERMGFPIAFTEIARAEback to top mRNA from alignment at H-elongata_contig10335:8273..8740- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10335.278.1 ID=mRNA_H-elongata_contig10335.278.1|Name=mRNA_H-elongata_contig10335.278.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=468bp|location=Sequence derived from alignment at H-elongata_contig10335:8273..8740- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10335:8273..8740- >mRNA_H-elongata_contig10335.278.1 ID=mRNA_H-elongata_contig10335.278.1|Name=mRNA_H-elongata_contig10335.278.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at H-elongata_contig10335:8273..8740- (Himanthalia elongata Himel1 dioecious)back to top |