Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 593 |
| Cds size | 591 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929567.665073-CDS-H-elongata_contig103170:660..986 | 1622929567.665073-CDS-H-elongata_contig103170:660..986 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig103170 661..986 + |
| 1691679073.6554842-CDS-H-elongata_contig103170:660..986 | 1691679073.6554842-CDS-H-elongata_contig103170:660..986 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig103170 661..986 + |
| 1622929567.6766243-CDS-H-elongata_contig103170:1001..1266 | 1622929567.6766243-CDS-H-elongata_contig103170:1001..1266 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig103170 1002..1266 + |
| 1691679073.665023-CDS-H-elongata_contig103170:1001..1266 | 1691679073.665023-CDS-H-elongata_contig103170:1001..1266 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig103170 1002..1266 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig103170.266.1 >prot_H-elongata_contig103170.266.1 ID=prot_H-elongata_contig103170.266.1|Name=mRNA_H-elongata_contig103170.266.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp
EIVYFVPKICASLKSSRMPSYGMLGGGTSKGCAQHTLDGMPDVFASISTG
NGCSKQPCYEMVSSEIREHCVEDALKGMATCAKYASEDIANVSGKMCADY
GCSKHPSYRKPEYCAIHAYEGMTCVGLKKCADDEPYKKPIYGMAGRKRPK
YCAEHSSTGIVNVTRESAGDGCSRPKNYDVAGIIKAEHCTEHAVEGI back to topmRNA from alignment at H-elongata_contig103170:661..1268+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig103170.266.1 ID=mRNA_H-elongata_contig103170.266.1|Name=mRNA_H-elongata_contig103170.266.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=608bp|location=Sequence derived from alignment at H-elongata_contig103170:661..1268+ (Himanthalia elongata Himel1 dioecious)
GAGATTGTCTACTTTGTTCCGAAAATTTGTGCCAGCCTCAAATCCTCTAG
AATGCCGAGTTACGGGATGCTCGGAGGCGGCACATCGAAGGGTTGCGCGC
AACATACTTTGGATGGGATGCCCGATGTTTTTGCAAGTATATCTACCGGC
AATGGGTGCTCTAAGCAACCGTGCTACGAGATGGTGAGCAGCGAGATCCG
AGAGCACTGCGTCGAGGATGCCTTAAAGGGGATGGCTACCTGCGCTAAGT
ATGCATCTGAGGATATAGCCAATGTTTCGGGCAAAATGTGTGCCGACTAT
GGATGCTCTAAGCACCCGAGCTACAGGAAAAATGGTACGGTGAAGCCGGA
GTACTGCGCGATACATGCTTATGAGGGGATGACTTGTGTTGGTTTGAAGA
AATGCGCCGACGATGAACCCTATAAAAAGCCAATTTACGGGATGGCTGGC
AGAAAGAGGCCCAAATATTGCGCTGAGCATTCCTCTACAGGAATCGTTAA
CGTTACAAGGGAGAGTGCGGGGGATGGATGCTCGAGGCCGAAAAATTATG
ACGTGGCCGGCATAATCAAAGCCGAGCACTGCACTGAGCATGCTGTCGAG
GGAATTAT back to topCoding sequence (CDS) from alignment at H-elongata_contig103170:661..1268+ >mRNA_H-elongata_contig103170.266.1 ID=mRNA_H-elongata_contig103170.266.1|Name=mRNA_H-elongata_contig103170.266.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1182bp|location=Sequence derived from alignment at H-elongata_contig103170:661..1268+ (Himanthalia elongata Himel1 dioecious)
GAGATTGTCTACTTTGTTCCGAAAATTTGTGCCAGCCTCAAATCCTCTAG
AATGCCGAGTTACGGGATGCTCGGAGGCGGCACATCGAAGGGTTGCGCGC
AACATACTTTGGATGGGATGCCCGATGTTTTTGCAAGTATATCTACCGGC
AATGGGTGCTCTAAGCAACCGTGCTACGAGATGGTGAGCAGCGAGATCCG
AGAGCACTGCGTCGAGGATGCCTTAAAGGGGATGGCTACCTGCGCTAAGT
ATGCATCTGAGGATATAGCCAATGTTTCGGGCAAAATGTGTGCCGACTAT
GGATGCTCTAAGCACCCGAGCTACAGGAGATTGTCTACTTTGTTCCGAAA
ATTTGTGCCAGCCTCAAATCCTCTAGAATGCCGAGTTACGGGATGCTCGG
AGGCGGCACATCGAAGGGTTGCGCGCAACATACTTTGGATGGGATGCCCG
ATGTTTTTGCAAGTATATCTACCGGCAATGGGTGCTCTAAGCAACCGTGC
TACGAGATGGTGAGCAGCGAGATCCGAGAGCACTGCGTCGAGGATGCCTT
AAAGGGGATGGCTACCTGCGCTAAGTATGCATCTGAGGATATAGCCAATG
TTTCGGGCAAAATGTGTGCCGACTATGGATGCTCTAAGCACCCGAGCTAC
AGGAAGCCGGAGTACTGCGCGATACATGCTTATGAGGGGATGACTTGTGT
TGGTTTGAAGAAATGCGCCGACGATGAACCCTATAAAAAGCCAATTTACG
GGATGGCTGGCAGAAAGAGGCCCAAATATTGCGCTGAGCATTCCTCTACA
GGAATCGTTAACGTTACAAGGGAGAGTGCGGGGGATGGATGCTCGAGGCC
GAAAAATTATGACGTGGCCGGCATAATCAAAGCCGAGCACTGCACTGAGC
ATGCTGTCGAGGGAATTGAAGCCGGAGTACTGCGCGATACATGCTTATGA
GGGGATGACTTGTGTTGGTTTGAAGAAATGCGCCGACGATGAACCCTATA
AAAAGCCAATTTACGGGATGGCTGGCAGAAAGAGGCCCAAATATTGCGCT
GAGCATTCCTCTACAGGAATCGTTAACGTTACAAGGGAGAGTGCGGGGGA
TGGATGCTCGAGGCCGAAAAATTATGACGTGGCCGGCATAATCAAAGCCG
AGCACTGCACTGAGCATGCTGTCGAGGGAATT back to top
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