mRNA_H-elongata_contig10315.263.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10315.263.1
Unique NamemRNA_H-elongata_contig10315.263.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig10315.263.1 vs. uniprot
Match: D8LBA4_ECTSI (Bifunctional dihydrofolate reductase-thymidylate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA4_ECTSI)

HSP 1 Score: 547 bits (1409), Expect = 2.370e-191
Identity = 256/289 (88.58%), Postives = 274/289 (94.81%), Query Frame = 1 
Query:   58 GNDEEAQYLRLVEDILENGVLRGDRTGTGTLSKFGVQMRFSLRGERFPLLTTKRVFWRGVAEELLWFISGCTNANILKERGIHIWDGNGSREFLDNLGLTDREEGDLGPVYGFQWRHFGAEYTNMHADYTGRGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAKGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGELVHTIGDAHVYLNHVDALREQLRRKPRAFPTLSIAPAKNDIDSFDFSDFNLKGYSPHKTIKMKMAV 924
            GN+EE QYL LVEDIL+NGV RGDRTGTGTLSKFGVQMRFSLR ERFPLLTTKRVFWRGVAEELLWF++GCTNAN+LKERGIHIWDGNGSREFLD LGLT+REEGDLGPVYGFQWRHFGAEYT+MHADYTG+GVDQLAECI+KIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVA+GELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAG+ VHTIGDAHVY+NHVDALREQL+RKPR FPTLSI   + DIDSF++    +KGYSP+KTIKMKMAV
Sbjct:  293 GNEEEMQYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAECIQKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 581
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BLAST of mRNA_H-elongata_contig10315.263.1 vs. uniprot
Match: A0A4D9D1L8_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1L8_9STRA)

HSP 1 Score: 497 bits (1280), Expect = 1.360e-172
Identity = 233/289 (80.62%), Postives = 256/289 (88.58%), Query Frame = 1 
Query:   58 GNDEEAQYLRLVEDILENGVLRGDRTGTGTLSKFGVQMRFSLRGERFPLLTTKRVFWRGVAEELLWFISGCTNANILKERGIHIWDGNGSREFLDNLGLTDREEGDLGPVYGFQWRHFGAEYTNMHADYTGRGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAKGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGELVHTIGDAHVYLNHVDALREQLRRKPRAFPTLSIAPAKNDIDSFDFSDFNLKGYSPHKTIKMKMAV 924
            GN EEAQYLRLV++I+E+G  RGDRT TGTLSKFG Q+RFSLR E FPLLTTKRVFWRGVAEELLWFISG T+AN LKE+ I IWDGN SRE+LD LGL+ REEGDLGPVYGFQWRHFGAEY++MHADYTG+G+DQLA  I  IK NPEDRRI++SAWNPADLGKMALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASYALLTRLVAQ CGLKAGE +HTIGDAHVYLNHVDAL+EQL R PR+FP L I PAK  IDSF F DF ++GY PH+++KMKMAV
Sbjct:  237 GNQEEAQYLRLVQEIIEHGKRRGDRTQTGTLSKFGAQLRFSLRDETFPLLTTKRVFWRGVAEELLWFISGSTDANYLKEKKIGIWDGNSSREYLDKLGLSHREEGDLGPVYGFQWRHFGAEYSDMHADYTGKGIDQLARAITTIKDNPEDRRIIVSAWNPADLGKMALPPCHMFCQFYVADGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQVCGLKAGEFIHTIGDAHVYLNHVDALKEQLTRTPRSFPKLRINPAKKHIDSFTFEDFTIEGYLPHESLKMKMAV 525
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BLAST of mRNA_H-elongata_contig10315.263.1 vs. uniprot
Match: A0A6V1QDS4_HETAK (Thymidylate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QDS4_HETAK)

HSP 1 Score: 484 bits (1246), Expect = 5.620e-171
Identity = 224/289 (77.51%), Postives = 253/289 (87.54%), Query Frame = 1 
Query:   58 GNDEEAQYLRLVEDILENGVLRGDRTGTGTLSKFGVQMRFSLRGERFPLLTTKRVFWRGVAEELLWFISGCTNANILKERGIHIWDGNGSREFLDNLGLTDREEGDLGPVYGFQWRHFGAEYTNMHADYTGRGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAKGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGELVHTIGDAHVYLNHVDALREQLRRKPRAFPTLSIAPAKNDIDSFDFSDFNLKGYSPHKTIKMKMAV 924
            GN EE QYL L+ +ILE G  RGDRTGTGTLSKFGVQMRFSLR E  PLLTTKRVFWRGVAEELLWF++GCT+A  L+ + IHIWDGNGSREFLD+LG T+R EGDLGPVYGFQWRH+GAEYT+   DYTG+G+DQLA+CI KIK +PEDRRI+L+AWNP+ L  MALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASY+LLTR++AQ CGLKAG+ VHTIGDAHVYLNHVDALREQ+RR PRAFP L + P K DIDSF++SDF ++GY+P K IKMKMAV
Sbjct:    4 GNPEEQQYLDLLREILETGARRGDRTGTGTLSKFGVQMRFSLRDETLPLLTTKRVFWRGVAEELLWFVAGCTDARKLQAKNIHIWDGNGSREFLDSLGHTERAEGDLGPVYGFQWRHWGAEYTHFEDDYTGKGIDQLAQCIDKIKNSPEDRRIILTAWNPSALKDMALPPCHMFCQFYVADGELSCQMYQRSADMGLGVPFNIASYSLLTRMMAQVCGLKAGDFVHTIGDAHVYLNHVDALREQIRRTPRAFPKLRLNPEKMDIDSFEYSDFTVEGYNPDKAIKMKMAV 292
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BLAST of mRNA_H-elongata_contig10315.263.1 vs. uniprot
Match: A0A7S1ZFK3_TRICV (Thymidylate synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZFK3_TRICV)

HSP 1 Score: 476 bits (1224), Expect = 1.050e-166
Identity = 226/292 (77.40%), Postives = 244/292 (83.56%), Query Frame = 1 
Query:   55 DGNDEEAQYLRLVEDILENGVLRGDRTGTGTLSKFGVQMRFSLRGERFPLLTTKRVFWRGVAEELLWFISGCTNANILKERGIHIWDGNGSREFLDNLGLTDREEGDLGPVYGFQWRHFGAEYTNMHADYTGRGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYV--AKGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGELVHTIGDAHVYLNHVDALREQLRRKPRAFPTLSIAPAKNDIDSFDFSDFNLKGYSPHKTIKMKMAV 924
            D N EE QYL ++ DIL+NGV RGDRTGTGT+SKFG QMRFSLR    PLLTTKR FWRGVAEELLWFISG TNAN L E+GIHIWDGNGSREFLD  GL DRE GDLGPVYGFQWRHFGA+YT+MHADY G+GVDQLAECI+KIKTNPEDRRI++SAWNPADL  MALPPCHMFCQFYV     ELSCQMYQRSADMGLGVPFNIASYALLT +VA+  GL+ G+ VHTIGDAHVY NHV+AL EQL+R PR FP L I P K  ID F + DF L GY PHKTIKMKMAV
Sbjct:   60 DVNPEEMQYLDMIRDILDNGVRRGDRTGTGTISKFGTQMRFSLRDGTMPLLTTKRTFWRGVAEELLWFISGSTNANDLTEKGIHIWDGNGSREFLDGRGLKDREVGDLGPVYGFQWRHFGAQYTDMHADYAGKGVDQLAECIEKIKTNPEDRRIIMSAWNPADLDLMALPPCHMFCQFYVDTVNNELSCQMYQRSADMGLGVPFNIASYALLTHMVARVTGLEPGDFVHTIGDAHVYANHVEALEEQLKRAPRRFPKLRINPEKRGIDDFVYDDFELVGYRPHKTIKMKMAV 351
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BLAST of mRNA_H-elongata_contig10315.263.1 vs. uniprot
Match: A0A7S3HAW9_9STRA (Thymidylate synthase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAW9_9STRA)

HSP 1 Score: 473 bits (1218), Expect = 7.740e-166
Identity = 218/279 (78.14%), Postives = 243/279 (87.10%), Query Frame = 1 
Query:   58 GNDEEAQYLRLVEDILENGVLRGDRTGTGTLSKFGVQMRFSLRGERFPLLTTKRVFWRGVAEELLWFISGCTNANILKERGIHIWDGNGSREFLDNLGLTDREEGDLGPVYGFQWRHFGAEYTNMHADYTGRGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAKGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGELVHTIGDAHVYLNHVDALREQLRRKPRAFPTLSIAPAKNDIDSFDFSDFNLKGYSP 894
            GN EE QYL +V+DI+ NGVLRGDRTGTGTLSKFGVQMRF+LR   FPLLTTKRVFWRGVAEEL+WF+ GCTN N+L ++ IHIWDGNGSREFLD+ GL  RE GDLGPVYGFQWRHFGA YT+MHADY G+GVDQL +CI K+KT PEDRRI+L+AWNPADL KMALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASY+LLT +VAQA GLK G+ VH+IGDAHVY+NHVDAL+EQL R PRAFPTL I P   DID F+FSDF ++GY P
Sbjct:   70 GNPEEQQYLDIVKDIIANGVLRGDRTGTGTLSKFGVQMRFNLRNNVFPLLTTKRVFWRGVAEELIWFVRGCTNGNLLSDKDIHIWDGNGSREFLDSRGLGHREVGDLGPVYGFQWRHFGATYTDMHADYKGQGVDQLLDCIHKLKTCPEDRRIILTAWNPADLDKMALPPCHMFCQFYVANGELSCQMYQRSADMGLGVPFNIASYSLLTAMVAQAAGLKCGDFVHSIGDAHVYVNHVDALKEQLDRVPRAFPTLKINPEVTDIDKFEFSDFTIEGYKP 348
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BLAST of mRNA_H-elongata_contig10315.263.1 vs. uniprot
Match: A0A835Z035_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z035_9STRA)

HSP 1 Score: 479 bits (1232), Expect = 2.070e-165
Identity = 219/291 (75.26%), Postives = 250/291 (85.91%), Query Frame = 1 
Query:   52 EDGNDEEAQYLRLVEDILENGVLRGDRTGTGTLSKFGVQMRFSLRGERFPLLTTKRVFWRGVAEELLWFISGCTNANILKERGIHIWDGNGSREFLDNLGLTDREEGDLGPVYGFQWRHFGAEYTNMHADYTGRGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAKGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGELVHTIGDAHVYLNHVDALREQLRRKPRAFPTLSIAPAKNDIDSFDFSDFNLKGYSPHKTIKMKMAV 924
            E+ NDEE QYL LV+DI++NG LRGDRTGTGTLSKFG QMRFSLRG RFPLLTTKRVFWRGVAEELLWF++GCT+A  L+ + IHIWDGNGSR FLD+ GL  REEGDLGPVYGFQWRHFGA+Y +   DY G+GVDQLA+CI KIK +P+DRRI++SAWNP DL  MALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASY+LLT +VAQ CGLK G+ +HTIGDAHVY+NHVDALREQ++R PR FP L + PA+ DIDSF+  DF L+GY+P   IKM+MAV
Sbjct:  228 EEPNDEERQYLDLVQDIIDNGALRGDRTGTGTLSKFGAQMRFSLRGGRFPLLTTKRVFWRGVAEELLWFVAGCTDAGALQAKNIHIWDGNGSRAFLDSRGLEHREEGDLGPVYGFQWRHFGAKYVDFRTDYKGQGVDQLADCIHKIKNSPDDRRIIMSAWNPCDLELMALPPCHMFCQFYVANGELSCQMYQRSADMGLGVPFNIASYSLLTCMVAQVCGLKPGDFIHTIGDAHVYVNHVDALREQIKRVPRPFPKLRLHPARTDIDSFEMKDFTLEGYNPMNAIKMQMAV 518
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BLAST of mRNA_H-elongata_contig10315.263.1 vs. uniprot
Match: A0A7S2WWT1_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWT1_9STRA)

HSP 1 Score: 478 bits (1229), Expect = 2.010e-164
Identity = 219/285 (76.84%), Postives = 248/285 (87.02%), Query Frame = 1 
Query:   70 EAQYLRLVEDILENGVLRGDRTGTGTLSKFGVQMRFSLRGERFPLLTTKRVFWRGVAEELLWFISGCTNANILKERGIHIWDGNGSREFLDNLGLTDREEGDLGPVYGFQWRHFGAEYTNMHADYTGRGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAKGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGELVHTIGDAHVYLNHVDALREQLRRKPRAFPTLSIAPAKNDIDSFDFSDFNLKGYSPHKTIKMKMAV 924
            E QYL L++DI++NGV+RGDRTGTGT+SKFG QMRFSLRG+ FPLLTTK+VFWRGVAEELLWF+SG TNA +L+++ I IWDGN SREFLD  GL  REEGDLGPVYGFQWRHFGA Y +MHA+Y G+GVDQL + I  IK+ P DRRI++SAWNPADL  MALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASY+LLTR++AQ CGLKAG+ +HTIGDAHVYLNHVDALREQL R PR FP L I P K++IDSFDFSDF ++GY PH TIKMKMAV
Sbjct:  271 EMQYLALIQDIIDNGVVRGDRTGTGTVSKFGAQMRFSLRGDEFPLLTTKKVFWRGVAEELLWFVSGSTNAKLLQDKKIKIWDGNASREFLDGRGLHHREEGDLGPVYGFQWRHFGARYEDMHANYDGKGVDQLMQAINTIKSRPNDRRIIVSAWNPADLDLMALPPCHMFCQFYVANGELSCQMYQRSADMGLGVPFNIASYSLLTRMMAQVCGLKAGDFIHTIGDAHVYLNHVDALREQLARAPRPFPKLRINPDKSEIDSFDFSDFTVEGYKPHGTIKMKMAV 555
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BLAST of mRNA_H-elongata_contig10315.263.1 vs. uniprot
Match: A0A6G0XU71_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XU71_9STRA)

HSP 1 Score: 472 bits (1215), Expect = 1.410e-163
Identity = 217/286 (75.87%), Postives = 249/286 (87.06%), Query Frame = 1 
Query:   67 EEAQYLRLVEDILENGVLRGDRTGTGTLSKFGVQMRFSLRGERFPLLTTKRVFWRGVAEELLWFISGCTNANILKERGIHIWDGNGSREFLDNLGLTDREEGDLGPVYGFQWRHFGAEYTNMHADYTGRGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAKGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGELVHTIGDAHVYLNHVDALREQLRRKPRAFPTLSIAPAKNDIDSFDFSDFNLKGYSPHKTIKMKMAV 924
            EE QYL L++ IL+ GV +GDRTGTGT+S FG QMRFSLR + FPLLTTKRVFW+GVAEELLWFISG T+A  L+++GI IWDGNGSRE+LD++GL+ REEGDLGPVYGFQWRHFGA+Y +MH DYTG+G DQLAE I KIK  P DRRI+LSAWNP+DLG MALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASY+LLTR++AQ CGLKAG+L+H  GDAHVYLNHV+ L EQL+R PR FP L + PAK DIDSF+FSDF L+GY+PHKTIKM M+V
Sbjct:  182 EELQYLELIQRILDEGVQKGDRTGTGTISLFGAQMRFSLRDDIFPLLTTKRVFWKGVAEELLWFISGNTSAKTLQDKGIKIWDGNGSREYLDSIGLSHREEGDLGPVYGFQWRHFGAKYVDMHTDYTGQGHDQLAEVIHKIKHTPNDRRIILSAWNPSDLGIMALPPCHMFCQFYVANGELSCQMYQRSADMGLGVPFNIASYSLLTRMIAQVCGLKAGDLIHVFGDAHVYLNHVEPLLEQLKRSPRPFPKLYLNPAKTDIDSFEFSDFTLEGYNPHKTIKMDMSV 467
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BLAST of mRNA_H-elongata_contig10315.263.1 vs. uniprot
Match: B5YMV7_THAPS (Bifunctional dihydrofolate reductase-thymidylate synthase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMV7_THAPS)

HSP 1 Score: 471 bits (1211), Expect = 2.970e-162
Identity = 224/294 (76.19%), Postives = 245/294 (83.33%), Query Frame = 1 
Query:   55 DGNDEEAQYLRLVEDILENGVLRGDRTGTGTLSKFGVQMRFSLRGERFPLLTTKRVFWRGVAEELLWFISGCTNANILKERGIHIWDGNGSREFLDNLGLTDREEGDLGPVYGFQWRHFGAEYTNMHADYTGRGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVA--KGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGELVHTIGDAHVYLNHVDALREQLRRKPRAFPTLSIAPAK--NDIDSFDFSDFNLKGYSPHKTIKMKMAV 924
            D N EE QYL +  DI+ENGV RGDRTGTGTLSKFGVQMR+SLR    PLLTTKR FWRGVAEELLWF+ G TNAN L ++ IHIWDGNGSREFLD+ GL  REEGDLGPVYGFQWRHFGAEY +MHADYTG+GVDQLA+CI KI  NPEDRRIV+SAWNP DL  MALPPCHMFCQFYV   + E+SCQMYQRSADMGLGVPFNIASYALLT ++A+  G KAG+ VHTIGDAHVYLNHVDAL+EQL RKPRAFP L +   K  NDID F+F DF + GY PHKTIKMKMAV
Sbjct:  223 DVNPEEMQYLEICRDIIENGVRRGDRTGTGTLSKFGVQMRYSLRDNTLPLLTTKRTFWRGVAEELLWFVKGSTNANELADKNIHIWDGNGSREFLDSRGLQHREEGDLGPVYGFQWRHFGAEYKDMHADYTGQGVDQLADCIDKIINNPEDRRIVMSAWNPKDLDVMALPPCHMFCQFYVDTDRNEVSCQMYQRSADMGLGVPFNIASYALLTHMIAKVTGRKAGDFVHTIGDAHVYLNHVDALKEQLERKPRAFPKLKMKDGKDFNDIDGFEFDDFEVVGYKPHKTIKMKMAV 516
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BLAST of mRNA_H-elongata_contig10315.263.1 vs. uniprot
Match: A0A485LPV1_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPV1_9STRA)

HSP 1 Score: 468 bits (1203), Expect = 1.040e-161
Identity = 215/286 (75.17%), Postives = 244/286 (85.31%), Query Frame = 1 
Query:   67 EEAQYLRLVEDILENGVLRGDRTGTGTLSKFGVQMRFSLRGERFPLLTTKRVFWRGVAEELLWFISGCTNANILKERGIHIWDGNGSREFLDNLGLTDREEGDLGPVYGFQWRHFGAEYTNMHADYTGRGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAKGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGELVHTIGDAHVYLNHVDALREQLRRKPRAFPTLSIAPAKNDIDSFDFSDFNLKGYSPHKTIKMKMAV 924
            EE QYL L+E IL+ GV +GDRTGTGT+S FG QMRFSLR   FPLLTTKRVFW+GVAEELLWF+SG TNA  L+++GI IWDGNGSR++LD++GL  REEGDLGPVYGFQWRHFGA Y +MH DYTG+G DQLA+ I KIK  P DRRI+LSAWNPADLG MALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASYALLTR++AQ CGL AG+ +H IGDAHVYLNHV+ LR+QL R PR FPTL + PAK DID+F+FSDF +  Y+PHKTIKM M+V
Sbjct:  185 EEHQYLDLIERILDEGVQKGDRTGTGTVSLFGAQMRFSLRDNVFPLLTTKRVFWKGVAEELLWFVSGNTNAKTLQDKGIKIWDGNGSRDYLDSIGLAHREEGDLGPVYGFQWRHFGATYVDMHTDYTGQGHDQLADVIDKIKNKPNDRRIILSAWNPADLGLMALPPCHMFCQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTRMLAQVCGLSAGDFIHVIGDAHVYLNHVEPLRQQLARAPRPFPTLRLNPAKTDIDAFEFSDFTIDAYNPHKTIKMDMSV 470
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10315.263.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBA4_ECTSI2.370e-19188.58Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A4D9D1L8_9STRA1.360e-17280.62Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A6V1QDS4_HETAK5.620e-17177.51Thymidylate synthase n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1ZFK3_TRICV1.050e-16677.40Thymidylate synthase n=1 Tax=Trieres chinensis Tax... [more]
A0A7S3HAW9_9STRA7.740e-16678.14Thymidylate synthase (Fragment) n=1 Tax=Spumella e... [more]
A0A835Z035_9STRA2.070e-16575.26Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A7S2WWT1_9STRA2.010e-16476.84Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A6G0XU71_9STRA1.410e-16375.87Bifunctional dihydrofolate reductase-thymidylate s... [more]
B5YMV7_THAPS2.970e-16276.19Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A485LPV1_9STRA1.040e-16175.17Bifunctional dihydrofolate reductase-thymidylate s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10315contigH-elongata_contig10315:330..2870 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score547.7
Seed ortholog evalue3.4e-153
Seed eggNOG ortholog2880.D8LBA4
Preferred nameTYMS
KEGG rclassRC00109,RC00110,RC00158,RC00219,RC00332
KEGG koko:K00287,ko:K00560,ko:K13998
KEGG ReactionR00936,R00937,R00939,R00940,R02101,R02235,R02236,R11765
KEGG Pathwayko00240,ko00670,ko00790,ko01100,ko01523,map00240,map00670,map00790,map01100,map01523
KEGG ModuleM00053,M00126,M00840,M00841
GOsGO:0000082,GO:0000083,GO:0000166,GO:0000278,GO:0000900,GO:0001101,GO:0001501,GO:0001889,GO:0002064,GO:0002065,GO:0002066,GO:0002069,GO:0002070,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004146,GO:0004633,GO:0004799,GO:0004857,GO:0005488,GO:0005515,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005829,GO:0006066,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006231,GO:0006259,GO:0006355,GO:0006417,GO:0006575,GO:0006725,GO:0006729,GO:0006730,GO:0006732,GO:0006753,GO:0006760,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007049,GO:0007275,GO:0007399,GO:0007568,GO:0007584,GO:0007623,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009059,GO:0009108,GO:0009112,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009150,GO:0009152,GO:0009157,GO:0009162,GO:0009163,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009256,GO:0009257,GO:0009259,GO:0009260,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009396,GO:0009605,GO:0009611,GO:0009636,GO:0009719,GO:0009725,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009987,GO:0009991,GO:0010033,GO:0010181,GO:0010243,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010646,GO:0014070,GO:0015936,GO:0015937,GO:0015949,GO:0016020,GO:0016032,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016740,GO:0016741,GO:0016829,GO:0016830,GO:0016831,GO:0017144,GO:0017148,GO:0018130,GO:0019048,GO:0019087,GO:0019088,GO:0019208,GO:0019212,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0019751,GO:0019752,GO:0019842,GO:0019860,GO:0019866,GO:0020021,GO:0021700,GO:0022008,GO:0022402,GO:0023051,GO:0030030,GO:0030154,GO:0030182,GO:0030234,GO:0030371,GO:0030855,GO:0031090,GO:0031099,GO:0031100,GO:0031102,GO:0031103,GO:0031175,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0031427,GO:0031667,GO:0031960,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032259,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032553,GO:0032570,GO:0032768,GO:0032770,GO:0033189,GO:0033218,GO:0033273,GO:0033554,GO:0033560,GO:0033865,GO:0033866,GO:0033875,GO:0033993,GO:0034030,GO:0034032,GO:0034033,GO:0034097,GO:0034248,GO:0034249,GO:0034311,GO:0034312,GO:0034399,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0035094,GO:0035295,GO:0035821,GO:0035999,GO:0036094,GO:0040007,GO:0042083,GO:0042221,GO:0042398,GO:0042493,GO:0042558,GO:0042559,GO:0042802,GO:0042803,GO:0043085,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044003,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045182,GO:0045471,GO:0046073,GO:0046078,GO:0046104,GO:0046105,GO:0046120,GO:0046125,GO:0046126,GO:0046134,GO:0046146,GO:0046165,GO:0046173,GO:0046385,GO:0046390,GO:0046394,GO:0046452,GO:0046483,GO:0046653,GO:0046654,GO:0046655,GO:0046677,GO:0046683,GO:0046983,GO:0048037,GO:0048468,GO:0048469,GO:0048511,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048545,GO:0048565,GO:0048583,GO:0048589,GO:0048666,GO:0048678,GO:0048699,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050661,GO:0050662,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0050999,GO:0051000,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051216,GO:0051246,GO:0051248,GO:0051252,GO:0051341,GO:0051353,GO:0051384,GO:0051593,GO:0051701,GO:0051704,GO:0051716,GO:0051817,GO:0051870,GO:0051871,GO:0055086,GO:0055114,GO:0055123,GO:0060255,GO:0060429,GO:0060574,GO:0060575,GO:0060576,GO:0061008,GO:0061448,GO:0061564,GO:0065007,GO:0065009,GO:0070013,GO:0070402,GO:0071695,GO:0071704,GO:0071840,GO:0071897,GO:0072341,GO:0072521,GO:0072522,GO:0072527,GO:0072528,GO:0080090,GO:0080134,GO:0080135,GO:0090079,GO:0090304,GO:0090322,GO:0090407,GO:0097159,GO:0097305,GO:0097327,GO:0097329,GO:0097367,GO:0097421,GO:0098772,GO:0120036,GO:1900407,GO:1901031,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901654,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1902882,GO:1903047,GO:1903506,GO:1990825,GO:2000112,GO:2000113,GO:2000121,GO:2000377,GO:2001141
EggNOG free text desc.thymidylate synthase activity
EggNOG OGsCOG0207@1,COG0262@1,KOG0673@2759,KOG1324@2759
EC1.5.1.3,2.1.1.45
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons4
Model size927
Cds size927
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10315.263.1prot_H-elongata_contig10315.263.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10315 330..2870 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929567.4275706-CDS-H-elongata_contig10315:329..6731622929567.4275706-CDS-H-elongata_contig10315:329..673Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10315 330..673 +
1691679073.4783907-CDS-H-elongata_contig10315:329..6731691679073.4783907-CDS-H-elongata_contig10315:329..673Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10315 330..673 +
1622929567.4370854-CDS-H-elongata_contig10315:1060..12071622929567.4370854-CDS-H-elongata_contig10315:1060..1207Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10315 1061..1207 +
1691679073.5045984-CDS-H-elongata_contig10315:1060..12071691679073.5045984-CDS-H-elongata_contig10315:1060..1207Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10315 1061..1207 +
1622929567.4478238-CDS-H-elongata_contig10315:1703..19141622929567.4478238-CDS-H-elongata_contig10315:1703..1914Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10315 1704..1914 +
1691679073.5136921-CDS-H-elongata_contig10315:1703..19141691679073.5136921-CDS-H-elongata_contig10315:1703..1914Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10315 1704..1914 +
1622929567.4638703-CDS-H-elongata_contig10315:2645..28701622929567.4638703-CDS-H-elongata_contig10315:2645..2870Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10315 2646..2870 +
1691679073.5262113-CDS-H-elongata_contig10315:2645..28701691679073.5262113-CDS-H-elongata_contig10315:2645..2870Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10315 2646..2870 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10315.263.1

>prot_H-elongata_contig10315.263.1 ID=prot_H-elongata_contig10315.263.1|Name=mRNA_H-elongata_contig10315.263.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=309bp
AGATKSNSAVAPTEDQDEDGNDEEAQYLRLVEDILENGVLRGDRTGTGTL
SKFGVQMRFSLRGERFPLLTTKRVFWRGVAEELLWFISGCTNANILKERG
IHIWDGNGSREFLDNLGLTDREEGDLGPVYGFQWRHFGAEYTNMHADYTG
RGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAK
GELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGELVHTIGDA
HVYLNHVDALREQLRRKPRAFPTLSIAPAKNDIDSFDFSDFNLKGYSPHK
TIKMKMAV*
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mRNA from alignment at H-elongata_contig10315:330..2870+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10315.263.1 ID=mRNA_H-elongata_contig10315.263.1|Name=mRNA_H-elongata_contig10315.263.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2541bp|location=Sequence derived from alignment at H-elongata_contig10315:330..2870+ (Himanthalia elongata Himel1 dioecious)
GCCGGAGCGACCAAATCGAATTCCGCCGTGGCGCCAACCGAAGATCAAGA
CGAGGACGGAAACGATGAAGAGGCACAGTACCTGCGACTGGTCGAGGATA
TATTGGAAAACGGCGTCCTTCGGGGAGATCGCACTGGGACCGGGACGCTG
TCCAAGTTTGGGGTTCAGATGCGCTTTAGCCTGCGAGGGGAACGGTTTCC
GCTGCTTACGACGAAGCGGGTCTTCTGGCGCGGAGTGGCGGAGGAGCTGC
TATGGTTCATCTCCGGCTGTACGAACGCCAACATCCTTAAGGAACGGGGA
ATTCACATCTGGGACGGAAACGGGTCGAGGGAGTTCCTTGACAAGTGAGC
GTGGCCCAGAGCAACCTCGCTCTTAGATTTGTCACACATCATGCTGTGAA
TTTATAATGTTGGATCGGATGGCGTGCAAACGGCACCATGGTAATCGGTC
GTGGATGTTACGAGAAACGCTACCGACACCCAACAAGCCACCCAAGGTGG
TAACTCGACCACAATATCGTTGACTTCGAGAATGACACAGTTACCCGCGG
GGGAGGCACCTTTTCCCCCGACAAGCCTCCTCATAGGCACACTATAAACC
ATCAAGAGTGCTCGATGCTTGCTTCACGCACGCGCCACTTACTTGAAGTA
GACTTTCGGTCCGCCCTTACAGTTGGTACACGCTTCTGCACTCTGCCGCC
ACGTTTTTTCTCTTACGCTCCCACGCGCAAGCCTGGGACTCACCGACCGC
GAGGAAGGAGACCTTGGTCCCGTCTACGGATTTCAGTGGCGGCACTTCGG
AGCGGAATACACTAACATGCACGCCGACTACACGGGACGGGGCGTGGACC
AACTTGCTGAGTGTATTAAGAAGATAAAGTAAGCACTAAATCACAGGCAA
GCGTGAACGAAGTGAACAAAAGCGGCGCCGCTGTGACAGGTTGCCCTCCA
ATATTTACGGTCGTGTTTCGTATGTTTCTCATTGCCTACTCTTGAGACTC
CTCCCTTTACGATCAACCGTGGGAAAGGTGCTCGCATGTGCCTTGTGAGG
AGCGGCTCCTATAATAGCAGCACGAGTGAGTGCAGGTGTATGTGGCCACC
TTTCCCACAGCGTGTGCGCCTATTCCCCAATAATAACGTACCCTCTTCCA
ACCCCTCCCCCGCCTCCCCTTATCGCATGGCGTGTCCGGTTTGGCCTAGC
GAACTCAAGGATGATGACTAAAAGCTGGAATAGTTATTATGAAACGCAGT
CTGGCTGTCAAAAACCCAGCATATTTTGATTTATCCCTGAGTTATTCGTG
GTATTAGTCCGTTAGGATACGATATGTGTTTGACAGAAGGATACCCCCCC
CCCCGCCGACCGCAATTTGAACAGAACCAATCCGGAGGACCGACGCATTG
TTCTCTCCGCCTGGAATCCGGCGGATCTCGGGAAGATGGCGCTGCCCCCG
TGCCACATGTTCTGTCAGTTTTACGTGGCGAAGGGAGAACTGTCTTGCCA
AATGTACCAGCGAAGCGCAGATATGGGATTGGGCGTGCCCTTCAACATCG
CATCGTACGCGCTGCTCACGCGACTGGTAGCCCAGGTGAAAGAGTAGATA
GAGGGACGCGAACGCGTGTGGTCTCGCGTGATTTTGTTCAGGCCTTGCGC
CATCGTGTTCGGGTACCCACTTTATTTGGGATAACTCTTAACATCGCATG
AACAGGAAGAAAATACCATTCTGGGACAATATGAGCTGGAGTACTGTAAA
GGTCAGCTTCCAGATAATTGTCTGGTTCTCCTAAAGCGTTAGGGATATAA
AAAACAAAAATAGAGAGTGAAAGAACCAATACAAAAAATGCGACTAAATC
TTTTTAAATAAAAATAAATGTAAGGATAAAAAAATAATATTTACCGTTTT
AGCTTTATAGCTTTAATTCCTAATGGATTATTCGAACCATCTTTATGCAA
TAGTATGGTATATCCAGGTTTCGGCATCAGATGGCGTTGAAAGTTAATGC
GACTCCTTTATCGGTGTGTGTATAGCTTCCTCGGTTTTTAGCTTCCAGGA
AGGGTCGACACTAATTCTAACTAGTGGCGACAAGTGTTTTTTTCGTAGCA
CGGGCGCTTAACGTTTTTCCTTCAGGGGCAGGTATGGATGCACGCCAAAA
CAAGAATTCGATTGTATTGTGGCCTCTCATCATCTACTTTGTCCAGTTGC
TTGCGCTTTTCCATCGCGGGCGAGCGACCTATGTCTCATCATGGCTAAGT
AGATTTTTCTCGATACACCCAATGAAAAAAGCGCTAAATGAAGGTTTACG
ATTGTCTCGCCCGCAGGCTTGCGGCCTGAAGGCGGGCGAGCTCGTCCACA
CCATCGGAGACGCGCACGTGTACCTCAACCACGTAGACGCCCTTCGGGAA
CAGCTGCGCCGCAAGCCCCGTGCGTTCCCCACCCTCTCAATCGCTCCCGC
GAAAAACGACATCGATTCCTTCGACTTCAGCGACTTCAACCTCAAAGGGT
ACTCTCCACACAAGACAATCAAGATGAAGATGGCGGTGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig10315:330..2870+

>mRNA_H-elongata_contig10315.263.1 ID=mRNA_H-elongata_contig10315.263.1|Name=mRNA_H-elongata_contig10315.263.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1854bp|location=Sequence derived from alignment at H-elongata_contig10315:330..2870+ (Himanthalia elongata Himel1 dioecious)
GCCGGAGCGACCAAATCGAATTCCGCCGTGGCGCCAACCGAAGATCAAGA
CGAGGACGGAAACGATGAAGAGGCACAGTACCTGCGACTGGTCGAGGATA
TATTGGAAAACGGCGTCCTTCGGGGAGATCGCACTGGGACCGGGACGCTG
TCCAAGTTTGGGGTTCAGATGCGCTTTAGCCTGCGAGGGGAACGGTTTCC
GCTGCTTACGACGAAGCGGGTCTTCTGGCGCGGAGTGGCGGAGGAGCTGC
TATGGTTCATCTCCGGCTGTACGAACGCCAACATCCTTAAGGAACGGGGA
ATTCACATCTGGGACGGAAACGGGTCGAGGGAGTTCCTTGACAAGCCGGA
GCGACCAAATCGAATTCCGCCGTGGCGCCAACCGAAGATCAAGACGAGGA
CGGAAACGATGAAGAGGCACAGTACCTGCGACTGGTCGAGGATATATTGG
AAAACGGCGTCCTTCGGGGAGATCGCACTGGGACCGGGACGCTGTCCAAG
TTTGGGGTTCAGATGCGCTTTAGCCTGCGAGGGGAACGGTTTCCGCTGCT
TACGACGAAGCGGGTCTTCTGGCGCGGAGTGGCGGAGGAGCTGCTATGGT
TCATCTCCGGCTGTACGAACGCCAACATCCTTAAGGAACGGGGAATTCAC
ATCTGGGACGGAAACGGGTCGAGGGAGTTCCTTGACAACCTGGGACTCAC
CGACCGCGAGGAAGGAGACCTTGGTCCCGTCTACGGATTTCAGTGGCGGC
ACTTCGGAGCGGAATACACTAACATGCACGCCGACTACACGGGACGGGGC
GTGGACCAACTTGCTGAGTGTATTAAGAAGATAAACCTGGGACTCACCGA
CCGCGAGGAAGGAGACCTTGGTCCCGTCTACGGATTTCAGTGGCGGCACT
TCGGAGCGGAATACACTAACATGCACGCCGACTACACGGGACGGGGCGTG
GACCAACTTGCTGAGTGTATTAAGAAGATAAAAACCAATCCGGAGGACCG
ACGCATTGTTCTCTCCGCCTGGAATCCGGCGGATCTCGGGAAGATGGCGC
TGCCCCCGTGCCACATGTTCTGTCAGTTTTACGTGGCGAAGGGAGAACTG
TCTTGCCAAATGTACCAGCGAAGCGCAGATATGGGATTGGGCGTGCCCTT
CAACATCGCATCGTACGCGCTGCTCACGCGACTGGTAGCCCAGAACCAAT
CCGGAGGACCGACGCATTGTTCTCTCCGCCTGGAATCCGGCGGATCTCGG
GAAGATGGCGCTGCCCCCGTGCCACATGTTCTGTCAGTTTTACGTGGCGA
AGGGAGAACTGTCTTGCCAAATGTACCAGCGAAGCGCAGATATGGGATTG
GGCGTGCCCTTCAACATCGCATCGTACGCGCTGCTCACGCGACTGGTAGC
CCAGGCTTGCGGCCTGAAGGCGGGCGAGCTCGTCCACACCATCGGAGACG
CGCACGTGTACCTCAACCACGTAGACGCCCTTCGGGAACAGCTGCGCCGC
AAGCCCCGTGCGTTCCCCACCCTCTCAATCGCTCCCGCGAAAAACGACAT
CGATTCCTTCGACTTCAGCGACTTCAACCTCAAAGGGTACTCTCCACACA
AGACAATCAAGATGAAGATGGCGGTGTGAGCTTGCGGCCTGAAGGCGGGC
GAGCTCGTCCACACCATCGGAGACGCGCACGTGTACCTCAACCACGTAGA
CGCCCTTCGGGAACAGCTGCGCCGCAAGCCCCGTGCGTTCCCCACCCTCT
CAATCGCTCCCGCGAAAAACGACATCGATTCCTTCGACTTCAGCGACTTC
AACCTCAAAGGGTACTCTCCACACAAGACAATCAAGATGAAGATGGCGGT
GTGA
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