mRNA_H-elongata_contig102717.233.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig102717.233.1 vs. uniprot
Match: D7FN56_ECTSI (S-adenosylmethionine synthase n=3 Tax=Phaeophyceae TaxID=2870 RepID=D7FN56_ECTSI) HSP 1 Score: 427 bits (1097), Expect = 3.130e-148 Identity = 204/219 (93.15%), Postives = 215/219 (98.17%), Query Frame = 1 Query: 1 QVTVAYKKEDGRMVPQRVHTVVISTQHDDDVSNEKIRADLMEHVVKQVVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVTAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAKMRSGKTDEEIVEIINNNFDLRPGCLVRDLQLRRPVYQKTAAYGHFGRSDPDFTWETPKDLTI 657 QVTVAYK+E+GRMVPQRVHTVVISTQHDDDVSNEKIRADL EHV+K VVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLV AGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAK RSGKTDEE+VEIINNNFDLRPGCL+RDLQLR+P+++KTAAYGHFGRSDP+FTWETPKDLT+ Sbjct: 179 QVTVAYKEENGRMVPQRVHTVVISTQHDDDVSNEKIRADLQEHVIKHVVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVHAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAKTRSGKTDEELVEIINNNFDLRPGCLLRDLQLRKPIFRKTAAYGHFGRSDPEFTWETPKDLTL 397
BLAST of mRNA_H-elongata_contig102717.233.1 vs. uniprot
Match: B7ZGN6_9PHAE (S-adenosylmethionine synthase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGN6_9PHAE) HSP 1 Score: 421 bits (1082), Expect = 2.600e-147 Identity = 201/219 (91.78%), Postives = 213/219 (97.26%), Query Frame = 1 Query: 1 QVTVAYKKEDGRMVPQRVHTVVISTQHDDDVSNEKIRADLMEHVVKQVVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVTAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAKMRSGKTDEEIVEIINNNFDLRPGCLVRDLQLRRPVYQKTAAYGHFGRSDPDFTWETPKDLTI 657 QVTVAYK+E+GRMVPQRVHTVVIS QHDDDVSNEKIRADLMEHV+K VVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLV+AGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAK RSGK+DE++VEIINNNFDLRPGCL+RDL LRRP++QKTAAYGHFGR+D DFTWE PKDLT+ Sbjct: 89 QVTVAYKEENGRMVPQRVHTVVISCQHDDDVSNEKIRADLMEHVIKHVVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVSAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAKTRSGKSDEDLVEIINNNFDLRPGCLLRDLSLRRPIFQKTAAYGHFGRTDADFTWEVPKDLTL 307
BLAST of mRNA_H-elongata_contig102717.233.1 vs. uniprot
Match: A0A835ZJ70_9STRA (S-adenosylmethionine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ70_9STRA) HSP 1 Score: 390 bits (1002), Expect = 9.510e-134 Identity = 186/217 (85.71%), Postives = 205/217 (94.47%), Query Frame = 1 Query: 1 QVTVAYKKEDGRMVPQRVHTVVISTQHDDDVSNEKIRADLMEHVVKQVVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVTAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAKMRSGKTDEEIVEIINNNFDLRPGCLVRDLQLRRPVYQKTAAYGHFGRSDPDFTWETPKDL 651 QVTV YK+EDGRMVP RVHTVVISTQH++DV+NEKIRADLMEHV+K V+PAKYLD +TI+HLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKD TKVDRSAAYAARWVAKSLV+AGLCHRVLVQLSYAIGVPYPLS+HVDSYGTA RSGK+D ++V+IIN+NFDLRPGC+VRDLQLRRP++QKTAAY HFGR D DFTWE PK+L Sbjct: 182 QVTVEYKEEDGRMVPVRVHTVVISTQHNEDVTNEKIRADLMEHVIKPVIPAKYLDANTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVSAGLCHRVLVQLSYAIGVPYPLSVHVDSYGTAMSRSGKSDFDLVKIINDNFDLRPGCIVRDLQLRRPIFQKTAAYCHFGRDDADFTWEVPKEL 398
BLAST of mRNA_H-elongata_contig102717.233.1 vs. uniprot
Match: A0A7S2XXK2_9STRA (S-adenosylmethionine synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXK2_9STRA) HSP 1 Score: 373 bits (957), Expect = 1.500e-129 Identity = 176/219 (80.37%), Postives = 201/219 (91.78%), Query Frame = 1 Query: 1 QVTVAYKKEDGRMVPQRVHTVVISTQHDDDVSNEKIRADLMEHVVKQVVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVTAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAKMRSGKTDEEIVEIINNNFDLRPGCLVRDLQLRRPVYQKTAAYGHFGRSDPDFTWETPKDLTI 657 QVTV YK E G+ VPQRVHTVVISTQH ++V+N+KI+ DLMEHV+K V+P KYLDD+T+YHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKD TKVDRSAAYA RWVAKSLV AGLC RVLVQLSYAIGVPYPLS+HVDSYGT+K GKTD E+VEI+N NFDLRPGC+VRDLQLRRP++++T+AYGHFGR++PDFTWET K+L++ Sbjct: 9 QVTVEYKFEGGKPVPQRVHTVVISTQHSEEVTNDKIKEDLMEHVIKPVIPEKYLDDNTVYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAGRWVAKSLVAAGLCDRVLVQLSYAIGVPYPLSVHVDSYGTSK---GKTDVELVEIVNKNFDLRPGCIVRDLQLRRPIFKQTSAYGHFGRNNPDFTWETVKELSL 224
BLAST of mRNA_H-elongata_contig102717.233.1 vs. uniprot
Match: W7TSQ4_9STRA (S-adenosylmethionine synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSQ4_9STRA) HSP 1 Score: 370 bits (949), Expect = 8.430e-126 Identity = 180/219 (82.19%), Postives = 193/219 (88.13%), Query Frame = 1 Query: 1 QVTVAYKKEDGRMVPQRVHTVVISTQHDDDVSNEKIRADLMEHVVKQVVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVTAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAKMRSGKTDEEIVEIINNNFDLRPGCLVRDLQLRRPVYQKTAAYGHFGRSDPDFTWETPKDLTI 657 QVTV YK E GR VPQRVHTVVISTQH +DV+ EKIR DL+EHV+K VVPAKYLDD TIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKD TKVDRSAAYAARWVAKSLV AGLCHRVLVQLSYAIGV +PLS+ VDSYGTAK RSGKTD E+ +I+ NFDLRPGC+ RDL L+RP+ KTAAYGHFGR+DPDFTWE K L I Sbjct: 175 QVTVEYKVEGGRPVPQRVHTVVISTQHSEDVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAGLCHRVLVQLSYAIGVAHPLSVFVDSYGTAKTRSGKTDTELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLEI 393
BLAST of mRNA_H-elongata_contig102717.233.1 vs. uniprot
Match: M4BQ36_HYAAE (S-adenosylmethionine synthase n=2 Tax=Peronosporaceae TaxID=4777 RepID=M4BQ36_HYAAE) HSP 1 Score: 362 bits (928), Expect = 8.510e-122 Identity = 176/217 (81.11%), Postives = 193/217 (88.94%), Query Frame = 1 Query: 1 QVTVAYKKEDGRMVPQRVHTVVISTQHDDDVSNEKIRADLMEHVVKQVVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVTAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAKMRSGKTDEEIVEIINNNFDLRPGCLVRDLQLRRPVYQKTAAYGHFGRSDPDFTWETPKDL 651 QVTV YKKEDG MVPQRVHTVVISTQH+DDV+NE+I ADLM+HV++ V+P KYLDD T+YHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKD TKVDRSAAYAARWVAKS+V GL HR+LVQLSYAIGVPYPLSIHVDSYGT K G +D+E+VEII NFDLRPG + + LQL+RPV QKTAAYGHFGR D DFTWET K+L Sbjct: 177 QVTVEYKKEDGCMVPQRVHTVVISTQHNDDVTNEQIAADLMKHVIQTVIPEKYLDDKTVYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSVVAKGLAHRLLVQLSYAIGVPYPLSIHVDSYGTVK--KGLSDDELVEIIKKNFDLRPGMIQKSLQLKRPVMQKTAAYGHFGREDADFTWETVKEL 391
BLAST of mRNA_H-elongata_contig102717.233.1 vs. uniprot
Match: H3GA19_PHYRM (S-adenosylmethionine synthase n=27 Tax=Peronosporaceae TaxID=4777 RepID=H3GA19_PHYRM) HSP 1 Score: 359 bits (922), Expect = 1.020e-121 Identity = 174/219 (79.45%), Postives = 194/219 (88.58%), Query Frame = 1 Query: 1 QVTVAYKKEDGRMVPQRVHTVVISTQHDDDVSNEKIRADLMEHVVKQVVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVTAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAKMRSGKTDEEIVEIINNNFDLRPGCLVRDLQLRRPVYQKTAAYGHFGRSDPDFTWETPKDLTI 657 QVTV YK+EDGRM+PQRVHTVVISTQH+DDV+NE+I ADLM+HV++ V+P KYLDD T+YHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKD TKVDRSAAYAARWVAKS+V GL R+LVQLSYAIGVPYPLSIHVDSYGT K G +D+E+VEII NFDLRPG + + LQL+RPV QKTAAYGHFGR D DFTWET K+L + Sbjct: 176 QVTVEYKQEDGRMIPQRVHTVVISTQHNDDVTNEQIAADLMKHVIQTVIPEKYLDDKTVYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSVVAKGLASRLLVQLSYAIGVPYPLSIHVDSYGTVK--EGLSDDELVEIIKKNFDLRPGMIQKTLQLKRPVMQKTAAYGHFGREDVDFTWETVKELEL 392
BLAST of mRNA_H-elongata_contig102717.233.1 vs. uniprot
Match: F0YMD4_AURAN (S-adenosylmethionine synthase n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0YMD4_AURAN) HSP 1 Score: 358 bits (920), Expect = 1.870e-121 Identity = 172/219 (78.54%), Postives = 189/219 (86.30%), Query Frame = 1 Query: 1 QVTVAYKKEDGRMVPQRVHTVVISTQHDDDVSNEKIRADLMEHVVKQVVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVTAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAKMRSGKTDEEIVEIINNNFDLRPGCLVRDLQLRRPVYQKTAAYGHFGRSDPDFTWETPKDLTI 657 QVT YK + GR +PQRVHT+VISTQH + VS E+IR LME VV+ VVP KYLDDDTIYH+NPSGRF+IGGPHGDAGLTGRKI++DTYGGWG HGGGA SGKD TKVDRSAAYAARWVAKSLV A LCHRVLVQL+YAIGV YP+SIHVDSYGT SGKTD E+VEII NFDLRPGC+VRDLQLRRPV QKTAAYGHFGR D FTWETPK+L++ Sbjct: 171 QVTCEYKMKAGRPLPQRVHTIVISTQHTEAVSQEQIRESLMEQVVRAVVPGKYLDDDTIYHMNPSGRFIIGGPHGDAGLTGRKIVVDTYGGWGTHGGGALSGKDTTKVDRSAAYAARWVAKSLVNARLCHRVLVQLAYAIGVAYPISIHVDSYGTGPSLSGKTDVELVEIIKANFDLRPGCIVRDLQLRRPVMQKTAAYGHFGRDDDSFTWETPKELSL 389
BLAST of mRNA_H-elongata_contig102717.233.1 vs. uniprot
Match: A0A7S0PYC0_9EUKA (S-adenosylmethionine synthase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PYC0_9EUKA) HSP 1 Score: 356 bits (913), Expect = 2.020e-120 Identity = 171/219 (78.08%), Postives = 191/219 (87.21%), Query Frame = 1 Query: 1 QVTVAYKKEDGRMVPQRVHTVVISTQHDDDVSNEKIRADLMEHVVKQVVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVTAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAKMRSGKTDEEIVEIINNNFDLRPGCLVRDLQLRRPVYQKTAAYGHFGRSDPDFTWETPKDLTI 657 QVT Y+ E GR +P RVHTVVISTQH +D++ E+I+A LMEHVVK VVPA+YLD+ T+YHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKD TKVDRSAAYAARWVAKSLV AGL HR LVQLSYAIGV +PLS+ VD+YGT RS KTD +I EI+ NNFDLRPG ++RDL LRRPV +KTAAYGHFGR+DPDFTWETPK LT+ Sbjct: 169 QVTCEYRMEGGRPIPIRVHTVVISTQHSEDITQEEIKAQLMEHVVKAVVPAEYLDEKTVYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAGLAHRCLVQLSYAIGVSHPLSVFVDTYGTGMTRSQKTDAQITEIVKNNFDLRPGGIIRDLDLRRPVLKKTAAYGHFGRADPDFTWETPKVLTL 387
BLAST of mRNA_H-elongata_contig102717.233.1 vs. uniprot
Match: B9ZZX2_9STRA (S-adenosylmethionine synthase n=10 Tax=Bacillariophyta TaxID=2836 RepID=B9ZZX2_9STRA) HSP 1 Score: 355 bits (910), Expect = 5.210e-120 Identity = 170/217 (78.34%), Postives = 190/217 (87.56%), Query Frame = 1 Query: 1 QVTVAYKKEDGRMVPQRVHTVVISTQHDDDVSNEKIRADLMEHVVKQVVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVTAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAKMRSGKTDEEIVEIINNNFDLRPGCLVRDLQLRRPVYQKTAAYGHFGRSDPDFTWETPKDL 651 QVT YK DG VPQRVHT+VISTQH +DV+N++I +DLMEHV+K VVP KYLDD TIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKD TKVDRSAAYAARWVAKSLV AGLC R LVQLSYAIGVPYPLS+ VDSYGT + GK+D ++ +I+N+NFDLRPGC++RDL L+RPV +KTAAYGHFGR DPDFTWE K+L Sbjct: 168 QVTCEYKLVDGVPVPQRVHTIVISTQHSEDVTNDQISSDLMEHVIKPVVPEKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAGLCKRALVQLSYAIGVPYPLSVFVDSYGT--VTEGKSDSDLTDIVNSNFDLRPGCIIRDLDLKRPVMRKTAAYGHFGRDDPDFTWEKVKEL 382 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102717.233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig102717.233.1 >prot_H-elongata_contig102717.233.1 ID=prot_H-elongata_contig102717.233.1|Name=mRNA_H-elongata_contig102717.233.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=220bp QVTVAYKKEDGRMVPQRVHTVVISTQHDDDVSNEKIRADLMEHVVKQVVPback to top mRNA from alignment at H-elongata_contig102717:994..2090- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig102717.233.1 ID=mRNA_H-elongata_contig102717.233.1|Name=mRNA_H-elongata_contig102717.233.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1097bp|location=Sequence derived from alignment at H-elongata_contig102717:994..2090- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig102717:994..2090- >mRNA_H-elongata_contig102717.233.1 ID=mRNA_H-elongata_contig102717.233.1|Name=mRNA_H-elongata_contig102717.233.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1320bp|location=Sequence derived from alignment at H-elongata_contig102717:994..2090- (Himanthalia elongata Himel1 dioecious)back to top |