Homology
BLAST of mRNA_H-elongata_contig102509.219.1 vs. uniprot
Match:
D7FKU0_ECTSI (Putative serine rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU0_ECTSI)
HSP 1 Score: 122 bits (307), Expect = 8.840e-31
Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 2
Query: 2 GSSEPMAMEPTECSNKKGLAFDFQDAADLEALSPGMSWWYNWSPAIIPLEVKAAQITSDTEYIPMIWGEKDMTTARLSNL 241
G P+A EPTEC K+G++FDF+DA DL+AL+PGMSWWYNWSPAII EVK AQ +S EYIPMIWGEKD+ + RL+NL
Sbjct: 117 GDPSPVATEPTECHGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWGEKDLDSTRLANL 196
BLAST of mRNA_H-elongata_contig102509.219.1 vs. uniprot
Match:
D8LG92_ECTSI (F5/8 type C domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG92_ECTSI)
HSP 1 Score: 94.0 bits (232), Expect = 1.280e-20
Identity = 39/80 (48.75%), Postives = 57/80 (71.25%), Query Frame = 2
Query: 2 GSSEPMAMEPTECSNKKGLAFDFQDAADLEALSPGMSWWYNWSPAIIPLEVKAAQITSDTEYIPMIWGEKDMTTARLSNL 241
GSSEP+ + PT+CS+K+G+AF F+++ DL L G+SWWY+WSP + + A +T + Y+PMIWGE D+T RL +L
Sbjct: 86 GSSEPVELVPTQCSSKRGVAFGFKESGDLYTLKTGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDL 165
BLAST of mRNA_H-elongata_contig102509.219.1 vs. uniprot
Match:
A0A6H5KQ88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ88_9PHAE)
HSP 1 Score: 91.3 bits (225), Expect = 1.080e-19
Identity = 38/80 (47.50%), Postives = 56/80 (70.00%), Query Frame = 2
Query: 2 GSSEPMAMEPTECSNKKGLAFDFQDAADLEALSPGMSWWYNWSPAIIPLEVKAAQITSDTEYIPMIWGEKDMTTARLSNL 241
G SEP+ + PT+CS+K+G+AF F+++ DL L G+SWWY+WSP + + A +T + Y+PMIWGE D+T RL +L
Sbjct: 49 GHSEPVELVPTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDL 128
BLAST of mRNA_H-elongata_contig102509.219.1 vs. uniprot
Match:
UPI0013DD757D (glycosyl hydrolase n=1 Tax=Pyxidicoccus caerfyrddinensis TaxID=2709663 RepID=UPI0013DD757D)
HSP 1 Score: 65.9 bits (159), Expect = 6.850e-11
Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 2
Query: 2 GSSEPMAMEPTECSNKKGLAFDFQDAADLEALSPGMSWWYNWSPAI---IPLEVKAAQITSDTEYIPMIWG 205
G S EPT S K+G+AFD ADL A+SPG+SWWYNWSP +P + +A ++IPM+W
Sbjct: 37 GVSRDAGTEPTAKSAKRGIAFDLATPADLAAVSPGVSWWYNWSPRPHRDVPTDYRARY---GMDFIPMLWN 104
BLAST of mRNA_H-elongata_contig102509.219.1 vs. uniprot
Match:
A0A554GSE9_9DELT (Glyco_hydro_cc domain-containing protein n=2 Tax=Corallococcus TaxID=83461 RepID=A0A554GSE9_9DELT)
HSP 1 Score: 65.5 bits (158), Expect = 8.060e-11
Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = 2
Query: 41 SNKKGLAFDFQDAADLEALSPGMSWWYNWSPAIIPLEVKAAQITS-DTEYIPMIWG 205
S+K+G+A+ + AADL+ALSPGMSWWYNWSP P + A+ +S + ++PM WG
Sbjct: 23 SSKRGIAYGYHSAADLKALSPGMSWWYNWSPR--PEDGAASVYSSQNVSFVPMAWG 76
BLAST of mRNA_H-elongata_contig102509.219.1 vs. uniprot
Match:
A0A017T4U7_9DELT (Putative secreted protein n=2 Tax=Chondromyces apiculatus TaxID=51 RepID=A0A017T4U7_9DELT)
HSP 1 Score: 65.5 bits (158), Expect = 1.110e-10
Identity = 29/76 (38.16%), Postives = 44/76 (57.89%), Query Frame = 2
Query: 14 PMAMEPTECSNKKGLAFDFQDAADLEALSPGMSWWYNWSPAIIPLEVKAAQITSDTEYIPMIWGEKDMTTARLSNL 241
P + PT C K+G+A+ + AD++ALSPG+SWWYNW+ A T +Y+PM+WG + AR + +
Sbjct: 77 PPSSHPTGC--KRGVAYGYHSTADMQALSPGVSWWYNWTHVPDEGVRPDAYETLGVDYVPMVWGGDGLDGARAAQI 150
BLAST of mRNA_H-elongata_contig102509.219.1 vs. uniprot
Match:
A0A3A8HWT0_9DELT (Glyco_hydro_cc domain-containing protein n=4 Tax=Myxococcaceae TaxID=31 RepID=A0A3A8HWT0_9DELT)
HSP 1 Score: 65.1 bits (157), Expect = 1.260e-10
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 2
Query: 41 SNKKGLAFDFQDAADLEALSPGMSWWYNWSPAIIPLEVKAAQITSDT-EYIPMIWG 205
S K+GLA+ + AADL+ALSPGMSWWYNWSP P + A+ S+ ++PM WG
Sbjct: 42 SAKRGLAYGYHSAADLKALSPGMSWWYNWSPR--PEDGAASVYASEAVSFVPMAWG 95
BLAST of mRNA_H-elongata_contig102509.219.1 vs. uniprot
Match:
A0A4Q5XY15_9DELT (Glyco_hydro_cc domain-containing protein n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q5XY15_9DELT)
HSP 1 Score: 64.7 bits (156), Expect = 1.650e-10
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 2
Query: 26 EPTECSNKKGLAFDFQDAADLEALSPGMSWWYNWSPAIIPLEVKAAQITSDT-EYIPMIWG 205
+P S K+G+A+ + A DL+ALSPGMSWWYNWSP P A+ TS++ ++PM WG
Sbjct: 28 DPATKSAKRGIAYGYHSADDLKALSPGMSWWYNWSPR--PEAGAASVYTSESVSFVPMAWG 86
BLAST of mRNA_H-elongata_contig102509.219.1 vs. uniprot
Match:
A0A0K1E7A5_CHOCO (Glyco_hydro_cc domain-containing protein n=1 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1E7A5_CHOCO)
HSP 1 Score: 63.9 bits (154), Expect = 3.730e-10
Identity = 29/76 (38.16%), Postives = 43/76 (56.58%), Query Frame = 2
Query: 14 PMAMEPTECSNKKGLAFDFQDAADLEALSPGMSWWYNWSPAIIPLEVKAAQITSDTEYIPMIWGEKDMTTARLSNL 241
P + +PT C K+G+A+ + AD+ ALSP +SWWYNW+ A T EY+PM+WG + AR + +
Sbjct: 59 PPSSQPTGC--KRGVAYGYHSQADMLALSPAVSWWYNWTHVPDEGVRPDAYTTIGVEYVPMVWGGGGLDAARATQI 132
BLAST of mRNA_H-elongata_contig102509.219.1 vs. uniprot
Match:
H8H0W5_DEIGI (F5/8 type C domain-containing protein n=2 Tax=Deinococcus TaxID=1298 RepID=H8H0W5_DEIGI)
HSP 1 Score: 63.9 bits (154), Expect = 4.450e-10
Identity = 28/63 (44.44%), Postives = 39/63 (61.90%), Query Frame = 2
Query: 17 MAMEPTECSNKKGLAFDFQDAADLEALSPGMSWWYNWSPAIIPLEVKAAQITSDTEYIPMIWG 205
+ + T S K+GLA+D A DL AL+PG+SWWYNWSPA + A T +++PM+W
Sbjct: 35 LTAQATAKSAKRGLAYDLATAPDLAALAPGVSWWYNWSPAPNGGAPQNAASTYGMDFVPMVWN 97
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102509.219.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 8.84e-31 / Id = 67.50 Expect = 1.28e-20 / Id = 48.75 Expect = 1.08e-19 / Id = 47.50 Expect = 6.85e-11 / Id = 45.07 Expect = 8.06e-11 / Id = 51.79 Expect = 1.11e-10 / Id = 38.16 Expect = 1.26e-10 / Id = 53.57 Expect = 1.65e-10 / Id = 49.18 Expect = 3.73e-10 / Id = 38.16 Expect = 4.45e-10 / Id = 44.44 Sequence D7FKU0_ECTSI D8LG92_ECTSI A0A6H5KQ88_9PHAE UPI0013DD757D A0A554GSE9_9DELT A0A017T4U7_9DELT A0A3A8HWT0_9DELT A0A4Q5XY15_9DELT A0A0K1E7A5_CHOCO H8H0W5_DEIGI Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 119.0 Seed ortholog evalue 9.4e-25 Seed eggNOG ortholog 2880.D7FKU0 Preferred name TOS1 GOs GO:0000271,GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003824,GO:0003843,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005975,GO:0005976,GO:0006073,GO:0006074,GO:0006075,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009272,GO:0009277,GO:0009987,GO:0010383,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0030312,GO:0033692,GO:0034406,GO:0034407,GO:0034410,GO:0034411,GO:0034637,GO:0034645,GO:0035251,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044036,GO:0044038,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0051273,GO:0051274,GO:0051278,GO:0070589,GO:0070592,GO:0070879,GO:0070880,GO:0071554,GO:0071704,GO:0071840,GO:0071852,GO:0071944,GO:0071966,GO:0071969,GO:0071970,GO:1901576 EggNOG free text desc. Putative TOS1-like glycosyl hydrolase (DUF2401) EggNOG OGs 2CBPA@1,2QSI7@2759 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA Hectar predicted targeting category other localisation Exons 2 Model size 241 Cds size 225 Stop 0 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622929562.7562213-UTR-H-elongata_contig102509:188..204 1622929562.7562213-UTR-H-elongata_contig102509:188..204 Himanthalia elongata Himel1 dioecious UTR H-elongata_contig102509 189..204 + 1691679071.5192938-UTR-H-elongata_contig102509:188..204 1691679071.5192938-UTR-H-elongata_contig102509:188..204 Himanthalia elongata Himel1 dioecious UTR H-elongata_contig102509 189..204 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622929562.773747-CDS-H-elongata_contig102509:204..305 1622929562.773747-CDS-H-elongata_contig102509:204..305 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig102509 205..305 + 1691679071.528871-CDS-H-elongata_contig102509:204..305 1691679071.528871-CDS-H-elongata_contig102509:204..305 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig102509 205..305 + 1622929562.789676-CDS-H-elongata_contig102509:718..842 1622929562.789676-CDS-H-elongata_contig102509:718..842 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig102509 719..842 + 1691679071.5380564-CDS-H-elongata_contig102509:718..842 1691679071.5380564-CDS-H-elongata_contig102509:718..842 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig102509 719..842 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig102509.219.1
>prot_H-elongata_contig102509.219.1 ID=prot_H-elongata_contig102509.219.1|Name=mRNA_H-elongata_contig102509.219.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp
MAMEPTECSNKKGLAFDFQDAADLEALSPGMSWWYNWSPAIIPLEVKAAQ back to top mRNA from alignment at H-elongata_contig102509:189..842+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig102509.219.1 ID=mRNA_H-elongata_contig102509.219.1|Name=mRNA_H-elongata_contig102509.219.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=654bp|location=Sequence derived from alignment at H-elongata_contig102509:189..842+ (Himanthalia elongata Himel1 dioecious)AGGCTCGTCCGAACCT ATGGCGATGGAGCCGACGGAGTGCAGCAACAAGA
AGGGGCTGGCGTTCGACTTCCAGGATGCCGCCGACTTAGAGGCGCTATCT
CCCGGCATGTCTTGGTG GTGAGGGAAGGAGGGAGGGAGGGAAGGGAAGGG
AAGGCGGGTGGAAACCCCTGCTGCTCCGCGTGTGCTACCAGCGCCTATTA
AATTCAGAGGGTAAAATTATAGGAGAGGATCAATAGTCGACTTTCCCGCA
GGGGTTGGAGGCAATTGCCCACGCTCTTAAGACGTTAAGGTCTGGAAGAA
TGCGCTCGCAACCCGACGAATGGTCGATGTGGATCGCCTTAGGACCAAGC
ACCCCGGCTTGGAATGTTCATGTATATTAATGCACCTTTGCGATACACGG
CCCGGGAAAATCTGTGATATGCTCTCATTGTTCGTTCGGCCTTCGGGCTC
TAGCGGAGGGGATGACGTCGCGGCCATGGTCTTCGTTTCCGCGTGAATCT
GTCACGCGAACGTGTTTTCTTGTTTTTAAGGTACAATTGGTCACCTGCCA
TCATCCCCTTGGAGGTGAAGGCCGCGCAAATCACGTCGGACACTGAATAC
ATCCCTATGATCTGGGGCGAGAAGGACATGACCACCGCACGACTCAGCAA
CCTC back to top Coding sequence (CDS) from alignment at H-elongata_contig102509:189..842+
>mRNA_H-elongata_contig102509.219.1 ID=mRNA_H-elongata_contig102509.219.1|Name=mRNA_H-elongata_contig102509.219.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=450bp|location=Sequence derived from alignment at H-elongata_contig102509:189..842+ (Himanthalia elongata Himel1 dioecious) back to top