mRNA_H-elongata_contig102462.216.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-elongata_contig102462.216.1 vs. uniprot
Match: D8LCJ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCJ2_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 6.790e-15 Identity = 48/83 (57.83%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 1 VGEIARAAAIFEVDEIVVYDDLSVSRKGNGGVRDDSCTNGSSLTGIAGKGGGEGGGMFTAGRGSGHHDRNNPNVFMARLLQVA 249
VGEIARAAA+FEVDEIVVYDDLSVSRKG GGVRDDS + D+NNPNVFMARLLQ A
Sbjct: 264 VGEIARAAAVFEVDEIVVYDDLSVSRKGQGGVRDDSASVAXXXXXXX--------XXXXXXXXXXXXDKNNPNVFMARLLQYA 338 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102462.216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig102462.216.1 >prot_H-elongata_contig102462.216.1 ID=prot_H-elongata_contig102462.216.1|Name=mRNA_H-elongata_contig102462.216.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp VGEIARAAAIFEVDEIVVYDDLSVSRKGNGGVRDDSCTNGSSLTGIAGKGback to top mRNA from alignment at H-elongata_contig102462:1517..1765- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig102462.216.1 ID=mRNA_H-elongata_contig102462.216.1|Name=mRNA_H-elongata_contig102462.216.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=249bp|location=Sequence derived from alignment at H-elongata_contig102462:1517..1765- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig102462:1517..1765- >mRNA_H-elongata_contig102462.216.1 ID=mRNA_H-elongata_contig102462.216.1|Name=mRNA_H-elongata_contig102462.216.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=498bp|location=Sequence derived from alignment at H-elongata_contig102462:1517..1765- (Himanthalia elongata Himel1 dioecious)back to top |