Homology
BLAST of mRNA_H-elongata_contig102354.205.1 vs. uniprot
Match:
D7FMQ9_ECTSI (Aquarius intron-binding protein similar to aquarius n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ9_ECTSI)
HSP 1 Score: 199 bits (506), Expect = 4.340e-57
Identity = 94/107 (87.85%), Postives = 101/107 (94.39%), Query Frame = 1
Query: 1 RSFNLFRLESAYEIRSDLVDAIRRSNPRKDPAQGGKTRFEGWARMATPISGVSITEVKKPNLGEKVPAEVLGEVSLNLAHFDRAHVREEWDSFREHDVVFLISIQSP 321
RSFNLFRLESAYEIR DLVDAIRR+NPR+DP +GG TRFEGWARMATPISGVSITEVKKPNLGEKVPAEVL EV+LNLAHFDR H+REEWD+ REHDVVFL+SIQSP
Sbjct: 1030 RSFNLFRLESAYEIRGDLVDAIRRTNPRRDPTRGGATRFEGWARMATPISGVSITEVKKPNLGEKVPAEVLSEVTLNLAHFDRMHMREEWDTLREHDVVFLVSIQSP 1136
BLAST of mRNA_H-elongata_contig102354.205.1 vs. uniprot
Match:
A0A7S3GMN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GMN5_9STRA)
HSP 1 Score: 117 bits (294), Expect = 1.630e-28
Identity = 59/107 (55.14%), Postives = 75/107 (70.09%), Query Frame = 1
Query: 1 RSFNLFRLESAYEIRSDLVDAIRRSNPRKDPAQGGKTRFEGWARMATPISGVSITEVKKPNLGEKVPAEVLGEVSLNLAHFDRAHVREEWDSFREHDVVFLISIQSP 321
R+F LFRLESAYEIR DL DAI+R P+ G F GWARMA PI VS+ EV KP LGE VP V V+++++ + +R+EW+SFREHDVVFL++IQ+P
Sbjct: 574 RNFTLFRLESAYEIRDDLTDAIKRMGPKA--GLRGAVNFGGWARMAVPIVSVSVDEVTKPKLGELVPRNVDCTVTIDISRYS-GDMRQEWESFREHDVVFLVAIQAP 677
BLAST of mRNA_H-elongata_contig102354.205.1 vs. uniprot
Match:
A0A7S0QJN2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QJN2_9CRYP)
HSP 1 Score: 115 bits (289), Expect = 5.530e-28
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 1
Query: 1 RSFNLFRLESAYEIRSDLVDAIRRSNPRKDPAQGGKTRFEGWARMATPISGVSITEVKKPNLGEKVPAEVLGEVSLNLAHFDRAHVREEWDSFREHDVVFLISIQS 318
R+FNLFRLES YEIR D+ DA R PR + GKT GWAR P+SG +TE+ KPNLGE PA V+GE S +L+ +R EW+ FREHD++FL+SI++
Sbjct: 64 RNFNLFRLESTYEIRQDVEDAALRLRPRLS-LETGKTVLTGWARSCLPLSGFRVTEISKPNLGETRPAYVVGEASYSLSGLRDVKLRTEWEEFREHDILFLLSIKA 168
BLAST of mRNA_H-elongata_contig102354.205.1 vs. uniprot
Match:
A0A6V7L1M4_9HYME (Aquarius_N domain-containing protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7L1M4_9HYME)
HSP 1 Score: 108 bits (270), Expect = 3.330e-27
Identity = 51/106 (48.11%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 4 SFNLFRLESAYEIRSDLVDAIRRSNPRKDPAQGGKTRFEGWARMATPISGVSITEVKKPNLGEKVPAEVLGEVSLNLAHFDRAHVREEWDSFREHDVVFLISIQSP 321
+FNLFRLES YEIR D+ D++ R +P K A+ G F GWARMA PI+ ++ EV KPN+GEK P+ V +V++NL+ R ++ EW++ R+HDV FL++++ P
Sbjct: 1 NFNLFRLESTYEIRQDIEDSVSRLSPWK--AEDGGVYFGGWARMAQPITQFAVVEVAKPNIGEKRPSRVRADVTINLSV--RREIKSEWENLRKHDVCFLLTVKPP 102
BLAST of mRNA_H-elongata_contig102354.205.1 vs. uniprot
Match:
A0A1Y1WSV3_9FUNG (Aquarius_N domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1WSV3_9FUNG)
HSP 1 Score: 114 bits (284), Expect = 3.390e-27
Identity = 54/106 (50.94%), Postives = 78/106 (73.58%), Query Frame = 1
Query: 1 RSFNLFRLESAYEIRSDLVDAIRRSNPRKDPAQGGKTRFEGWARMATPISGVSITEVKKPNLGEKVPAEVLGEVSLNLAHFDRAHVREEWDSFREHDVVFLISIQS 318
R+FNLFRLESAYEIR D+ DA++R P+ + T F GWARMA PI SI +V+KPNLGEK PA+V +V+ N++ + + +R+EW S R+HD++FL+++Q+
Sbjct: 399 RNFNLFRLESAYEIRQDIEDAVKRLAPKLIFPER-TTEFTGWARMAIPIETFSIVDVEKPNLGEKKPAKVAADVTFNISRYTPS-IRDEWSSLRQHDILFLLTLQA 502
BLAST of mRNA_H-elongata_contig102354.205.1 vs. uniprot
Match:
A0A7S3Z5T7_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z5T7_9EUKA)
HSP 1 Score: 114 bits (284), Expect = 3.640e-27
Identity = 54/106 (50.94%), Postives = 78/106 (73.58%), Query Frame = 1
Query: 1 RSFNLFRLESAYEIRSDLVDAIRRSNPRKDPAQGGKTRFEGWARMATPISGVSITEVKKPNLGEKVPAEVLGEVSLNLAHFDRAHVREEWDSFREHDVVFLISIQS 318
R+FNLFRLES YEIR D+ + + R PR A G T F GWA+MA PI +IT+VKKPN+GE PA+V E++++LA F ++ VR++W++ REHDV+FL+ +++
Sbjct: 119 RNFNLFRLESTYEIREDIKNVVHRLKPRI--AGNGDTVFTGWAKMAVPIKTFTITKVKKPNIGEIKPAQVAAEITVDLAPF-QSRVRQDWEAIREHDVLFLLCVEA 221
BLAST of mRNA_H-elongata_contig102354.205.1 vs. uniprot
Match:
A0A1Y1YIH7_9FUNG (Pre-mRNA-splicing factor n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YIH7_9FUNG)
HSP 1 Score: 114 bits (284), Expect = 3.640e-27
Identity = 54/106 (50.94%), Postives = 78/106 (73.58%), Query Frame = 1
Query: 1 RSFNLFRLESAYEIRSDLVDAIRRSNPRKDPAQGGKTRFEGWARMATPISGVSITEVKKPNLGEKVPAEVLGEVSLNLAHFDRAHVREEWDSFREHDVVFLISIQS 318
R+FNLFRLESAYEIR D+ DA++R P+ + T F GWARMA PI SI +V+KPNLGEK PA+V +V+ N++ + + +R+EW S R+HD++FL+++Q+
Sbjct: 375 RNFNLFRLESAYEIRQDIEDAVKRLAPKLIFPER-TTEFTGWARMAIPIETFSIVDVEKPNLGEKKPAKVAADVTFNISRYTPS-IRDEWSSLRQHDILFLLTLQA 478
BLAST of mRNA_H-elongata_contig102354.205.1 vs. uniprot
Match:
W7TJX7_9STRA (Intron-binding protein aquarius n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJX7_9STRA)
HSP 1 Score: 113 bits (283), Expect = 4.950e-27
Identity = 57/115 (49.57%), Postives = 72/115 (62.61%), Query Frame = 1
Query: 1 RSFNLFRLESAYEIRSDLVDAIRRSNPRKDPAQGGKTRFEGWARMATPIS--------GVSITEVKKPNLGEKVPAEVLGEVSLNLAHFDRAHVREEWDSFREHDVVFLISIQSP 321
RS+ LFR+ESAYEIR+DL+ +R P + G F GWARM P+ GV ITEV KPNLGE+VPA V E++++L REEWD REHDVVFL+ I++P
Sbjct: 161 RSYTLFRVESAYEIRADLMTTLRYLQPVRQEGPEGGVAFRGWARMGVPLRKGGKDGGRGVVITEVLKPNLGERVPAGVKAEITVDLREXXXXXXREEWDLLREHDVVFLVRIENP 275
BLAST of mRNA_H-elongata_contig102354.205.1 vs. uniprot
Match:
UPI0006C980D9 (intron-binding protein aquarius n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI0006C980D9)
HSP 1 Score: 113 bits (283), Expect = 4.990e-27
Identity = 54/107 (50.47%), Postives = 76/107 (71.03%), Query Frame = 1
Query: 1 RSFNLFRLESAYEIRSDLVDAIRRSNPRKDPAQGGKTRFEGWARMATPISGVSITEVKKPNLGEKVPAEVLGEVSLNLAHFDRAHVREEWDSFREHDVVFLISIQSP 321
R+FNLFRLES YEIR D+ D++ R +P K A+ G F GWARMA PI+ ++ EV KPN+GEK P+ V +VS+NL+ R ++ EW++ R+HDV FLI+++ P
Sbjct: 446 RNFNLFRLESTYEIRQDIEDSVSRLSPWK--AEDGSAYFGGWARMAQPITQFAVVEVAKPNIGEKQPSRVRADVSINLSV--RKEIKSEWENLRKHDVCFLITVRPP 548
BLAST of mRNA_H-elongata_contig102354.205.1 vs. uniprot
Match:
A0A4D9CVZ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVZ4_9STRA)
HSP 1 Score: 113 bits (282), Expect = 6.860e-27
Identity = 56/115 (48.70%), Postives = 72/115 (62.61%), Query Frame = 1
Query: 1 RSFNLFRLESAYEIRSDLVDAIRRSNPRKDPAQGGKTRFEGWARMATPIS--------GVSITEVKKPNLGEKVPAEVLGEVSLNLAHFDRAHVREEWDSFREHDVVFLISIQSP 321
RS+ LFR+ESAYEIR+DL+ +R P + G F GWARM P+ GV ITEV KPNLGE++PA V E++++L REEWD REHDVVFL+ I++P
Sbjct: 760 RSYTLFRVESAYEIRADLMTTLRYLQPVRQEGPEGGVAFRGWARMGVPLRKGGKDGGRGVVITEVLKPNLGERIPAGVKAEITVDLREXXXXXXREEWDLLREHDVVFLVRIENP 874
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102354.205.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 4.34e-57 / Id = 87.85 Expect = 1.63e-28 / Id = 55.14 Expect = 5.53e-28 / Id = 52.83 Expect = 3.33e-27 / Id = 48.11 Expect = 3.39e-27 / Id = 50.94 Expect = 3.64e-27 / Id = 50.94 Expect = 3.64e-27 / Id = 50.94 Expect = 4.95e-27 / Id = 49.57 Expect = 4.99e-27 / Id = 50.47 Expect = 6.86e-27 / Id = 48.70 Sequence D7FMQ9_ECTSI A0A7S3GMN5_9STRA A0A7S0QJN2_9CRYP A0A6V7L1M4_9HYME A0A1Y1WSV3_9FUNG A0A7S3Z5T7_9EUKA A0A1Y1YIH7_9FUNG W7TJX7_9STRA UPI0006C980D9 A0A4D9CVZ4_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 199.1 Seed ortholog evalue 1e-48 Seed eggNOG ortholog 2880.D7FMQ9 KEGG ko ko:K12874 KEGG Pathway ko03040,map03040 KEGG Module M00355 GOs GO:0000375,GO:0000377,GO:0000398,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0071014,GO:0071704,GO:0090304,GO:1901360,GO:1990904 EggNOG free text desc. mRNA splicing, via spliceosome EggNOG OGs KOG1806@1,KOG1806@2759 COG Functional cat. Z Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko03041 Hectar predicted targeting category other localisation Exons 2 Model size 321 Cds size 321 Stop 0 Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622929561.596826-CDS-H-elongata_contig102354:423..630 1622929561.596826-CDS-H-elongata_contig102354:423..630 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig102354 424..630 + 1691679071.0295548-CDS-H-elongata_contig102354:423..630 1691679071.0295548-CDS-H-elongata_contig102354:423..630 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig102354 424..630 + 1622929561.6078224-CDS-H-elongata_contig102354:1137..1251 1622929561.6078224-CDS-H-elongata_contig102354:1137..1251 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig102354 1138..1251 + 1691679071.0399368-CDS-H-elongata_contig102354:1137..1251 1691679071.0399368-CDS-H-elongata_contig102354:1137..1251 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig102354 1138..1251 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig102354.205.1
>prot_H-elongata_contig102354.205.1 ID=prot_H-elongata_contig102354.205.1|Name=mRNA_H-elongata_contig102354.205.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
RSFNLFRLESAYEIRSDLVDAIRRSNPRKDPAQGGKTRFEGWARMATPIS back to top mRNA from alignment at H-elongata_contig102354:424..1251+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig102354.205.1 ID=mRNA_H-elongata_contig102354.205.1|Name=mRNA_H-elongata_contig102354.205.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=828bp|location=Sequence derived from alignment at H-elongata_contig102354:424..1251+ (Himanthalia elongata Himel1 dioecious)AGGAGCTTCAACCTGTTCCGCCTCGAGTCCGCATACGAGATCCGCAGCGA
TCTGGTGGACGCCATTCGCCGGAGCAATCCGAGGAAGGACCCCGCCCAGG
GCGGCAAGACTCGGTTCGAGGGCTGGGCGAGGATGGCGACCCCCATCTCG
GGCGTGTCCATCACCGAGGTCAAGAAGCCCAACCTTGGCGAGAAGGTTCC
CGCTGAG GTGTGCGCGGCAATTTGTTTAATGTTTTATGTCTATGCCTATA
GCATGGCTAGATGGTCTATCTGCAGAATCTCTAGTCTGCCTTCGTAGAGC
TGGTATTTAATTGGTGTTGAAGTATCTGTATGTGTGTCTGTCTAGGTGCC
TATGTGTATTTATGTATATATCTGTTTGTGTGTGTGTTTTTATCTGGGTT
GTTGTATATGTGTATTTGTCTTTCTCTGTATGTATTTGTGTGTATATGTC
TGCCTGTATGTGTCTGGGTGTATATGTGATGGTGCTGTGTCCTTATGCCT
GTGCACGTCTAGTGGAAAACCGAACGAGGGTATATATTTGTATATATAAA
TTTATATTGAAACCGTTTTGTATCGTGCCCCCACCCCCTAATGTGTACCG
CCTCGCATAGAACCATCCAGGGCGGTAAGTACTGTTGCACTCTATCCACA
CAAGCGCGCGGCCCCCATCCGTGCGAGCAAAAAAATAATAATTACTTGAA
TACAATGTTTTCAGGTTTTGGGAGAAGTATCGCTGAATCTGGCGCACTTC
GACCGCGCACACGTCAGGGAAGAGTGGGACTCCTTCCGAGAGCACGACGT
GGTTTTCCTCATCTCTATACAGTCCCCT back to top Coding sequence (CDS) from alignment at H-elongata_contig102354:424..1251+
>mRNA_H-elongata_contig102354.205.1 ID=mRNA_H-elongata_contig102354.205.1|Name=mRNA_H-elongata_contig102354.205.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=642bp|location=Sequence derived from alignment at H-elongata_contig102354:424..1251+ (Himanthalia elongata Himel1 dioecious) back to top