mRNA_H-elongata_contig102.178.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig102.178.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 337 bits (865), Expect = 6.540e-92 Identity = 177/400 (44.25%), Postives = 253/400 (63.25%), Query Frame = 1 Query: 916 CYESITDGLT--CTGCSNIAWRIMTPVVALIVAFVVFYTVFKHLISPESMEARTGIMARLLRRLPIKSFNIIIVAWQILTQFATSANVIYPGIYQSLLKVVDIINFNPTWLPSVGCAMNVDFHGQFFIMTIGPILVILMLIAPYTYVARKYHESKEVLEIVRNRHVSALLFILFLVYSSTSSVVFQVFNCDTLDDGNSYLRADNTIECDEVRHRDLMIWAVFAILVYPVGIPLFFAFLLFKSRSVLLDKNL-REKHGSMGSISDLWKPYKPMRFYYEVVECSRRTMLIGVMAVIQDDSATQIAAALMLSFVFFVISEGLAPYESHMDAWVNRLGHAVVVFSMYYALLLKVDISNDSLLSQNVFEVMLISIHVLMIVLVIAEATMKGYTLKKEAGGEPILR 2106 C + T L CT CS A RI V +V V + V + +S + R+G++ARL + +P++S I+IVAWQILTQF + ANV YP +Y+ L +D+ NF+ +W+ S GC ++DFH + T+ P++ +L L Y E L+++ N+HVS +L + FL+YSS S+ +F+ F C+ L+DG +YLRAD TI+CD +H+ ++A F ++VY VGIP +AFLLF+ R VL D + RE+ S SDLWKPYKP FYYEV+EC RR +L GV+ I ++A QIA LM++F F ++SEGLAP+ S DAW+NR GH VV SMY ALLLKVD+S + SQ V+E++L++ H MI+ V+ E + ++LK E EP R Sbjct: 848 CSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEPTTR 1247
BLAST of mRNA_H-elongata_contig102.178.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 335 bits (860), Expect = 2.050e-90 Identity = 180/394 (45.69%), Postives = 261/394 (66.24%), Query Frame = 1 Query: 916 CYESITDGLT--CTGCS-NIAWRIMTPVVALIVAFVVFYTVFKHLISPE-SMEARTGIMARLLRRLPIKSFNIIIVAWQILTQFATSANVIYPGIYQSLLKVVDIINFNPTWLPSVGCAMNVDFHGQFFIMTIGPILVILMLIAPYTYVARKYHESKEVLEIVRNRHVSALLFILFLVYSSTSSVVFQVFNCDTLDDGNSYLRADNTIECDEVRHRDLMIWAVFAILVYPVGIPLFFAFLLFKSRSVLLDKNL-REKHGSMGSISDLWKPYKPMRFYYEVVECSRRTMLIGVMAVIQDDSATQIAAALMLSFVFFVISEGLAPYESHMDAWVNRLGHAVVVFSMYYALLLKVDISNDSLLSQNVFEVMLISIHVLMIVLVIAEATMKGYTLKKE 2082 C + T+ L+ C+ CS N A I VV ++ + V ++ S E M + GI+ + R +P++S I+IV+WQILTQF + ANV YP +YQ LL V+D+ NF+ +WL S GC ++++FHG+ + TI PI+ +L+L Y AR E L I+ N+HV+ +L + F VYSS SS +F+ F CD LD YLRAD +IEC+ HR + ++A F I++Y VGIP +A LLFKSR VL D++ RE+ + SIS+LW+PYKP FYYEV+EC RR +L GV+ I ++A QIA L+++F F ++SEGLAPY S D W++R+GH VV SMY ALLLKVD+S++ SQ VFE +L+++HV MI+ V+ EA ++ ++L++E Sbjct: 1102 CSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREE 1495
BLAST of mRNA_H-elongata_contig102.178.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 330 bits (846), Expect = 2.130e-88 Identity = 173/395 (43.80%), Postives = 248/395 (62.78%), Query Frame = 1 Query: 937 GLTCTGCSNIAWRIMTPVVALIVAFVVFYTVFKHLISPESMEARTGIMARLLRRLPIKSFNIIIVAWQILTQFATSANVIYPGIYQSLLKVVDIINFNPTWLPSVGCAMNVDFHGQFFIMTIGPILVILMLIAPYTYVARKYHESKEVLEIVRNRHVSALLFILFLVYSSTSSVVFQVFNCDTLDDGNSYLRADNTIECDEVRHRDLMIWAVFAILVYPVGIPLFFAFLLFKSRSVLLDKNL--REKHGSMGSISDLWKPYKPMRFYYEVVECSRRTMLIGVMAVIQDDSATQIAAALMLSFVFFVISEGLAPYESHMDAWVNRLGHAVVVFSMYYALLLKVDISNDSLLSQNVFEVMLISIHVLMIVLVIAEATMKGYTLKKEAGGEPILRNNR 2115 TC CS+ A I +V V+ V ++ S E GI+ R+ R +P++S I++VAWQI+TQF ANV YP +YQ+ L +++ NF+ +W+ S GC ++VDFH + + TIGPI L+L+ Y R + + E LE VR++HV +L + F VYSS S+ +F+ F C+TL+DG +YL AD IECD +H+ ++A F +L+Y GIP ++FLLF+ R VL + ++ S SDLWKPYKP FYYEVVEC+RR +L GV+ I +S+ QIA L+++F F +ISEGLAPY S D W+NR+GH VVV SMY ALLLKVD+S + SQ VFE +L+ HV+M+V+ +AE + L+ E + L+ +R Sbjct: 1212 SFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDR 1606
BLAST of mRNA_H-elongata_contig102.178.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 325 bits (834), Expect = 2.120e-87 Identity = 166/372 (44.62%), Postives = 244/372 (65.59%), Query Frame = 1 Query: 937 GLTCTGCSNIAWRIMTPVVALIVAFVVFYTVFKHLISPESMEARTGIMARLLRRLPIKSFNIIIVAWQILTQFATSANVIYPGIYQSLLKVVDIINFNPTWLPSVGCAMNVDFHGQFFIMTIGPILVILMLIAPYTYVARKYHESKEVLEIVRNRHVSALLFILFLVYSSTSSVVFQVFNCDTLDDGNSYLRADNTIECDEVRHRDLMIWAVFAILVYPVGIPLFFAFLLFKSRSVLL-DKNLREKHGSMGSISDLWKPYKPMRFYYEVVECSRRTMLIGVMAVIQDDSATQIAAALMLSFVFFVISEGLAPYESHMDAWVNRLGHAVVVFSMYYALLLKVDISNDSLLSQNVFEVMLISIHVLMIVLVIAE 2049 G +C+ C + + I+ V ++A V V +++S E+ E R ++ RL +P++S I+IV+WQILTQFA++ANV+YPG+YQ L + + F+ WL S GC +++ FHG+ TIGPI +L+L Y R E+ E L I+ ++HV L + FLVYSS SS +F+ F CD L+DG +YLR D IECD +H+ ++A F IL+YP+GIP+ ++ LLFK R VL DK R+ + S S+LW+PYKP FYYEV+EC RR +L G++ I ++A Q+A LM++F F ++SE ++PY S + WVNR+GH VV SMY ALLLKVD+S++ SQ+VFE +L+++H MI+ V+ E Sbjct: 1028 GYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVE 1399
BLAST of mRNA_H-elongata_contig102.178.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 326 bits (835), Expect = 1.010e-86 Identity = 177/400 (44.25%), Postives = 249/400 (62.25%), Query Frame = 1 Query: 916 CYESITDGLT--CTGCSNIAWRIMTPVVALIVAFVVFYTVFKHLISPESMEARTGIMARLLRRLPIKSFNIIIVAWQILTQFATSANVIYPGIYQSLLKVVDIINFNPTWLPSVGCAMNVDFHGQFFIMTIGPILVILMLIAPYTYVARKYHESKEVLEIVRNRHVSALLFILFLVYSSTSSVVFQVFNCDTLDDGNSYLRADNTIECDEVRHRDLMIWAVFAILVYPVGIPLFFAFLLFKSRSVLLDKNL-REKHGSMGSISDLWKPYKPMRFYYEVVECSRRTMLIGVMAVIQDDSATQIAAALMLSFVFFVISEGLAPYESHMDAWVNRLGHAVVVFSMYYALLLKVDISNDSLLSQNVFEVMLISIHVLMIVLVIAEATMKGYTLKKEAGGEPILR 2106 C + T GL+ C+ CS+ A I+ +VA +V V +++S + E G + RL R +P++S I++V+WQILTQF ANV YP +YQ L + + NF+ +W+ S GC + VDFH + I TIGPI+ +L L Y R + E L+++ NRHVS +L + VYSS SS +FQ F C++L DG +YLRAD I CD +H+ L ++A ++VY VGIP + LLF+ R VL RE+ + S S+LWKPYKP FYYEV+EC RR +L GV+ I ++A QIA L+++F F V+SEGLAPY S D W++R+GHAVV SMY ALLLKVD+SN+ + SQ VFEV+L++ H MI++++ E + L P LR Sbjct: 1659 CSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGERDGPALR 2058
BLAST of mRNA_H-elongata_contig102.178.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 317 bits (811), Expect = 3.100e-86 Identity = 170/387 (43.93%), Postives = 244/387 (63.05%), Query Frame = 1 Query: 937 GLTCTGCSNIAWRIMTPVVALIVAFVVFYTVFKHLISPESMEARTGIMARLLRRLPIKSFNIIIVAWQILTQFATSANVIYPGIYQSLLKVVDIINFNPTWLPSVGCAMNVDFHGQFFIMTIGPILVILMLIAPYTYVARKYHESKEVLEIVRNRHVSALLFILFLVYSSTSSVVFQVFNCDTLDDGNSYLRADNTIECDEVRHRDLMIWAVFAILVYPVGIPLFFAFLLFKSRSVLL-DKNLREKHGSMGSISDLWKPYKPMRFYYEVVECSRRTMLIGVMAVIQDDSATQIAAALMLSFVFFVISEGLAPYESHMDAWVNRLGHAVVVFSMYYALLLKVDISNDSLLSQNVFEVMLISIHVLMIVLVIAEATMKGYTLKKEAGGE 2094 G+ C+ CS+ A I V + + + + +S ES G++ R R +P++S I+IVAWQILTQF + AN+ +P +YQ L +++ NF+ W+ S GC +VDFH + + TI PI+ +L L A Y AR H S E L+ V ++HVS +L + FLVY+S S+V+FQ F C+ LDD +YLRAD IECD +H ++A F I++Y VGIP + LF+ VL D+ RE+ + +DLWKPY+P FYYEV+EC+RR +L GV+ I ++A QIA AL+++ VF +ISE LAPY S D W+ R+GHAVV SMY ALLLKVD+S++ SQ VFE +L++ HV M+ +V+ E M+ +L E G+ Sbjct: 578 GMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQ 964
BLAST of mRNA_H-elongata_contig102.178.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 316 bits (810), Expect = 4.170e-86 Identity = 168/391 (42.97%), Postives = 240/391 (61.38%), Query Frame = 1 Query: 937 GLTCTGCSNIAWRIMTPVVALIVAFVVFYTVFKHLISPESMEARTGIMARLLRRLPIKSFNIIIVAWQILTQFATSANVIYPGIYQSLLKVVDIINFNPTWLPSVGCAMNVDFHGQFFIMTIGPILVILMLIAPYTYVARKYHESKEVLEIVRNRHVSALLFILFLVYSSTSSVVFQVFNCDTLDDGNSYLRADNTIECDEVRHRDLMIWAVFAILVYPVGIPLFFAFLLFKSRSVL-LDKNLREKHGSMGSISDLWKPYKPMRFYYEVVECSRRTMLIGVMAVIQDDSATQIAAALMLSFVFFVISEGLAPYESHMDAWVNRLGHAVVVFSMYYALLLKVDISNDSLLSQNVFEVMLISIHVLMIVLVIAEATMKGYTLKKEAGGEPILR 2106 G TC+ C N A I+ ++ V ++ + L R LP+++ I++VAWQI+TQF ++ANV YP +YQ L +D+ NF+ +W+ S GC M++DFH + + TIGPI+ +L L A Y +R + L++V +RHVS +L ++FLVYS SSVVFQ F CD L+ G YLRAD IECD +H+ ++A F IL+YPVGIP F+ LL + R VL D + RE + SIS+LW+PY+P +YYEV+EC RR +L G++ I ++A QIA L+++ VF V+SE L PY D WV+R+ HAVV S+Y ALLLKVD+SN+ SQ VFE +L++ H MI+ V+ E + G + + EP R Sbjct: 618 GFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEPAPR 1008
BLAST of mRNA_H-elongata_contig102.178.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 321 bits (823), Expect = 7.310e-86 Identity = 166/372 (44.62%), Postives = 244/372 (65.59%), Query Frame = 1 Query: 937 GLTCTGCSNIAWRIMTPVVALIVAFVVFYTVFKHLISPESMEARTGIMARLLRRLPIKSFNIIIVAWQILTQFATSANVIYPGIYQSLLKVVDIINFNPTWLPSVGCAMNVDFHGQFFIMTIGPILVILMLIAPYTYVARKYHESKEVLEIVRNRHVSALLFILFLVYSSTSSVVFQVFNCDTLDDGNSYLRADNTIECDEVRHRDLMIWAVFAILVYPVGIPLFFAFLLFKSRSVLL-DKNLREKHGSMGSISDLWKPYKPMRFYYEVVECSRRTMLIGVMAVIQDDSATQIAAALMLSFVFFVISEGLAPYESHMDAWVNRLGHAVVVFSMYYALLLKVDISNDSLLSQNVFEVMLISIHVLMIVLVIAE 2049 G +C+ C + + I V +VA V V ++++S E+ E R + RL +P++S I+IV+WQI+TQFA++ANV+YPG+YQ + + + F+ WL SVGC +++DFHG+ TIGPI +L+L Y R E+ E L I+ ++HV L + FLVYSS SS +F+ F CD L+DGN YLR D IECD +H+ ++A F IL+YP+GIP+ ++ LLF+ R VL DK R + S S+LW+PYKP FYYEV+EC RR +L G++ I ++A Q+A LM++F F ++SE ++PY S + WVNR+GH VV S+Y ALLLKVD+S++ SQ+VFE +L+++H MI+ V+ E Sbjct: 1088 GYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGN-YLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVE 1458
BLAST of mRNA_H-elongata_contig102.178.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 321 bits (822), Expect = 2.480e-85 Identity = 174/384 (45.31%), Postives = 242/384 (63.02%), Query Frame = 1 Query: 925 SITDGLTCTGCSNIAWRIMTPVVALIVAFVVFYTVFKHLISPESMEARTGIMARLLRRLPIKSFNIIIVAWQILTQFATSANVIYPGIYQSLLKVVDIINFNPTWLPSVGCAMNVDFHGQFFIMTIGPILVILMLIAPYTYVARKYHESKEVLEIVRNRHVSALLFILFLVYSSTSSVVFQVFNCDTLDDGNSYLRADNTIECDEVRHRDLMIWAVFAILVYPVGIPLFFAFLLFKSRSVLL--DKNLREKHGSMGSISDLWKPYKPMRFYYEVVECSRRTMLIGVMAVIQDDSATQIAAALMLSFVFFVISEGLAPYESHMDAWVNRLGHAVVVFSMYYALLLKVDISNDSLLSQNVFEVMLISIHVLMIVLVIAEATMKGYT 2070 S++ TCT C + I VV + + HL+S E AR G++ R+++RLP++S I++V WQILTQF++ ANV YP +YQ L V+I+NF+ W+PS GC + VDFHG+ + TIGP++ + +L YT R+ S+ L+ +R++H+S +L I FLVYSS S+ VFQ F C+ LDD YLRAD IECD H+ ++A ILVYPVGIPLF+ +LL+K R VL D R+ + ISDLW PYKP RFYYEV+EC RR L GV+ I ++A Q+A LM++F F V S LAPY S DA ++ +GH +V SMY ALL KVD+S++ SQ VF +L++ H M+V V+ E + Y+ Sbjct: 1372 SMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYS 1755
BLAST of mRNA_H-elongata_contig102.178.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 299 bits (766), Expect = 2.480e-80 Identity = 155/334 (46.41%), Postives = 218/334 (65.27%), Query Frame = 1 Query: 1096 RLPIKSFNIIIVAWQILTQFATSANVIYPGIYQSLLKVVDIINFNPTWLPSVGCAMNVDFHGQFFIMTIGPILVILMLIAPYTYVARKYHESKEVLEIVRNRHVSALLFILFLVYSSTSSVVFQVFNCDTLDDGNSYLRADNTIECDEVRHRDLMIWAVFAILVYPVGIPLFFAFLLFKSRSVLLDKNLREKHGSMGSISDLWKPYKPMRFYYEVVECSRRTMLIGVMAVIQDDSATQIAAALMLSFVFFVISEGLAPYESHMDAWVNRLGHAVVVFSMYYALLLKVDISNDSLLSQNVFEVMLISIHVLMIVLVIAEATMKGYTLKKEAGGEP 2097 ++ +S I++V WQILTQF+ ANV YP IYQ L V+D++NF+ W+ S GC ++ DFH TIGPI+V+ +L A Y + + S E + V +HVSA+L + FLVYSS SS VF++F CD L D NSYLRAD +I+C +HR L I+AVF +L+YPVGIPLF+ LL+ +R L D + R+ H +IS LW+PY P R+Y EVVEC RR +L GV+ I +SA QIA +L+++F F VISE LAP+ S D WV+R GH ++ +M+ ALLLKVD+S++ SQ +F +L+ ++++ +AE +K E G P Sbjct: 698 KVSFRSLKIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSDEAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALKDGSCRQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVLFGAAVAEMVWMWCAVKMEENGSP 1031 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102.178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig102.178.1 >prot_H-elongata_contig102.178.1 ID=prot_H-elongata_contig102.178.1|Name=mRNA_H-elongata_contig102.178.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=483bp MIELSYGLLSKFSLWSQGRRTPPGTKTSIITKLISTCNSYPCLLFVEPDCback to top mRNA from alignment at H-elongata_contig102:1537..8133+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig102.178.1 ID=mRNA_H-elongata_contig102.178.1|Name=mRNA_H-elongata_contig102.178.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6597bp|location=Sequence derived from alignment at H-elongata_contig102:1537..8133+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig102:1537..8133+ >mRNA_H-elongata_contig102.178.1 ID=mRNA_H-elongata_contig102.178.1|Name=mRNA_H-elongata_contig102.178.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2898bp|location=Sequence derived from alignment at H-elongata_contig102:1537..8133+ (Himanthalia elongata Himel1 dioecious)back to top |