mRNA_H-elongata_contig10140.124.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10140.124.1
Unique NamemRNA_H-elongata_contig10140.124.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE)

HSP 1 Score: 490 bits (1261), Expect = 1.210e-162
Identity = 270/470 (57.45%), Postives = 321/470 (68.30%), Query Frame = 2
Query:  584 KKGDKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FPKTRIELCRMGSVAQRER----YCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGH------DRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIPERYDKDDVSHVGDIEVGVGGLIEKEREE 1963
            KK D R RLT+  EDQL EFIN EHK GRQ FRRT+A+W    C+ E   SNR   GLL RLGY+R RGRIKTPPL+A+RLARIR FLVEM +AKRAEDAGLAVIVYM++SFVHQAHG PYS FP     + + G      +      V +     P       L    G  K   + K +M++     A  + + +L++G       D  ++  +      P + A P   GK+ ILVLDNASYHHGF AEV+VPETNTKKHN  LLR FGA++I+ +       VVE++FE+PT  G+SFP   +EGGVSR EV  ATREY+ L HPE LEERVVT+MR+  W LIWTP YMPSFQPIELFWQHGKQY SLNF+LKRK++EVW QIR GWYGD E  GQEGGWKAADC KLV HAIGEMN W+K+RDGVLSG IG+LE P+ YD DDV  VGD+E GVG  I++E  E
Sbjct:  165 KKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKEMEDE--ETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLS-PAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVPPVGDVEEGVGEQIQQESAE 630          
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE)

HSP 1 Score: 485 bits (1249), Expect = 1.060e-160
Identity = 269/470 (57.23%), Postives = 322/470 (68.51%), Query Frame = 2
Query:  584 KKGDKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FPKTRIELCRMGSVAQRER----YCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGH------DRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIPERYDKDDVSHVGDIEVGVGGLIEKEREE 1963
            KK D R RLT+  EDQL EFIN EHK GRQ FRRT+A+W    C+ E   SNR   GLL RLGY+R RGRIKTPPL+A+RLARIR FLV M++AKRAEDAGLAVIVYM++SFVHQAHG PYS FP     + + G      +      V +     P       L    G  K   + K +M++     A  + + +L++G       D  ++  +      P + A P   GK+ ILVLDNASYHHGF +EV+VPETNTKKHN  LLR FGA++I+ +       VVE++FE+PT  G+SFP   +EGGVSR EV  ATREY+ L HPE LEERVVT+MR+  W LIWTP YMPSFQPIELFWQHGKQY SLNF+LKRK++EVW QIR GWYGD E  GQEGGWKAADC KLV HAIGEMN W+K+RDGVLSG IG+LE P+ YD DDVS VGD+E GVG  I++E  E
Sbjct:  176 KKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLV-MNMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKEMEDE--ETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLS-PAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQESAE 640          
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 484 bits (1246), Expect = 6.310e-160
Identity = 267/473 (56.45%), Postives = 316/473 (66.81%), Query Frame = 2
Query:  584 KKGDKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FP------------KTRIELCRMGSVAQRERYC-V*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGHDRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIPERYDKDDVSHVGDIEVGVGGLIEKEREE 1963
            K+ D R RLT+   DQL EFIN EHK GRQ FRRT+A+W    C+ E   SNR   GLL RLGY+R RGRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAVIVYM++SFVHQAHG PYS FP            +T  +  RM  V    ++  +   C   P    W     + GK K E     +         G+            +  H ++     P + A P   GKK ILVLDNASYHHGF AEV+VPETNTKKHN  LLRKFGA++I+ K        VEH+FE+P+  G+SFP   +EGGVSR EV  ATREY+ L +PE LEERVVT+M++  W LIWTP YMPSFQPIELFWQHGKQY SLNF+LKRK++EVW QIR GWYGD E  GQEGGWKAA+C KLV HAIGEMN W+++RD  LSG IG L+ P+ YDKDDVS VGD+E GVG  I++E  E
Sbjct:  199 KEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNMEQP-SNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKFCDGFPIEEGWFKETGS-GKKKMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLS-----PAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKEGEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRQGWYGDKEWSGQEGGWKAANCSKLVEHAIGEMNKWVRDRDAGLSGKIGNLQKPDGYDKDDVSPVGDVEEGVGEQIQQESAE 664          
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE)

HSP 1 Score: 439 bits (1128), Expect = 6.960e-145
Identity = 242/431 (56.15%), Postives = 290/431 (67.29%), Query Frame = 2
Query:  584 KKGDKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FPKTRIELCRMGSVAQRER----YCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGH------DRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGV 1846
            KK D R RLT+  EDQL EFIN EHK GRQ FRRT+A+W    C+ E   SNR   GLL RLGY+R RGRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAVIVYM++SFVHQAHG PYS FP     + + G      +      V +     P       L    G  K   + K +M++     A  + + +L++G       D  ++  +      P + A P   GK+ ILVLDNASYHHGF AEV+VPE+NTKKHN  LLR FGA++I+ +       VVE++ E+PT  G+SFP   +EGGVSR EV  ATREY+ L HPE LEERVVT+MR+  W LIWTP YMPSFQPIELFWQHGKQY SL F+LKRK++EVW QIR GWYGD    GQEGGWKAA+C KLV HAIGEMN W+K+RD V
Sbjct:   48 KKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKEMEDE--ETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLS-PAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVQIRKGWYGDKAWPGQEGGWKAANCSKLVDHAIGEMNKWVKDRDEV 474          
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5K024_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K024_9PHAE)

HSP 1 Score: 427 bits (1099), Expect = 1.050e-139
Identity = 247/489 (50.51%), Postives = 289/489 (59.10%), Query Frame = 2
Query:  584 KKGDKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FPKTRIELCRMGSVAQRERYCV*S*-----------------------------CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGHDRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIPERYDKDDVSHVGDIEVGVGGLIEKEREE 1963
            KK D R RLT+  EDQL EFIN EHK GRQ FRRT+A+W    C+ E   SNR   GLL RLGY+R RGRIKTPPL+A+RLARIR FLVEM +AK AEDAGL V   +                                                                     C   P    W     + GK + E     +   +     G+            +  H ++     P + A P   GK+ ILVLDNASYHHGF AEV+VPETNTKKHN  LLR FGA++I+ +       VVE++ E+PT  G+SFP   +EGGVSR EV  ATREY+ L HPE LEERVVT+MR+  W LIWTP YMPSFQPIELFWQHGKQY SLNF+LKRK++EVW QIR GWYGD E  GQEGGWKAADC KLV HAIGEMN W+K+RDGVLSG IG+LE P+ YD DDVS VGD+E GVG  I++E  E
Sbjct:   48 KKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKGAEDAGLMVPPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDGLPIEEGWFKETGS-GKKEMEDEETAEFLCHFKFAKGDHHAAMTDSMFMEWLEHRLS-----PAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQESAE 529          
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE)

HSP 1 Score: 396 bits (1017), Expect = 2.120e-128
Identity = 224/403 (55.58%), Postives = 268/403 (66.50%), Query Frame = 2
Query:  584 KKGDKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FPKTRIELCRMGSVAQRER----YCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGH------DRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEG 1762
            KK D R RLT+  EDQL EFIN EHK GRQ FRRT+A+W    C+ E   SNR  EGLL RLGY+  RGRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAVIVY++ SFVHQAHG PYS FP    E+ + G      +      V +     P     + L    G  K   + K +M++     A  + + +L++G       D  ++  +      P + A P   GK+ ILVLDNASYHHGF AEV+VPETNTKKHN  LLR FGA++I+ K       VVE +FE+PT  G+SFP   +EGGVSR EV  ATREY+ L HPE LEERVVT+MR+    LIWTP YMPSFQPIELFWQHGKQY S+NF+LKRK++EVW QIR GWYGD E  GQEG
Sbjct:   60 KKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAEGLLSRLGYKGRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLAKLCVGLPIEEGWFKETGSGKREMEDE--ETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLS-PAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVKRKEGEQGVVEENFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGLALIWTPPYMPSFQPIELFWQHGKQYVSVNFELKRKVREVWVQIRKGWYGDKEWPGQEG 458          
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 1.520e-114
Identity = 214/460 (46.52%), Postives = 274/460 (59.57%), Query Frame = 2
Query:  593 DKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FP------------KTRIELCRM---------GSVAQRERYCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRG--HD--------RFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIP 1879
            D R  +T+E ED L EFI GEH+ GRQ FRRT+ D  +  CS    +SNR   GLLQRLG++R RGRIK PPL+ +R  RIR+FLV+MD+AKRAEDAG+AVIVY+++SFVHQAHG  YS FP            +T  +  RM         G +A+ +           P R  W        K      +  +M +     A  + + +L+ G  H+        ++  H +T     P F A      KK  LVLDNASYHH F  EV+VPETN+KK+N +LLRK+G  + K    +  G   E++FE+P     S PN  ++ GVS++E+   TR Y     P+ LEE+  TYMRE  W LIWTP YMP+FQPIELFWQHGK Y S++F+  R I +VW+QIR GWYGD E  GQEGGWKAA+C KLV HAIG+M+ WI    G LSG IG+LE P
Sbjct:   47 DGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKD--YLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYIDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGF--------PIREGWFKAKENRAKKIKPGEADFEMSDE--QTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLT-----PAFDAQ--FKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRES-EGKAAEYNFEVPAQG--SLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNILDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 484          
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 7.550e-112
Identity = 192/363 (52.89%), Postives = 237/363 (65.29%), Query Frame = 2
Query:  905 MNQSFVHQAHGFPYS*FPKTRIELCRMGSVAQRER----YCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGH------DRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIPERYDKDDVSHVGDIEVGVGGLIEKEREE 1963
            M++SFVHQAHG PYS FP     + + G      +      V +     P       L    G  K   + K +M++     A  + + +L++G       D  ++  +      P + A P   GK+ ILVLDNASYHHGF A+V++PE+NTKKHN  LLR FGA++I+ K     G    ++FE+PT  G+SFP   +EGGVSR EV  ATREY+ L HPE LEERVVT+MR+  W LIWTP YMPSFQPIELFWQHGKQY SLNF+LKRK++EVW QIR GWYGD E  GQEGGWKAADC KLV HAIGEMN W+K+RDGVLSG IG+LE P+ YD DDVS VGD+E GVG  I++E  E
Sbjct:    1 MDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKEMEDE--ETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLN-PAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVDLLRMFGAKSIRVK--RKEGEQGVYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQESAE 358          
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 2.910e-108
Identity = 213/454 (46.92%), Postives = 271/454 (59.69%), Query Frame = 2
Query:  593 DKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FP------------KTRIELCRMGSV-AQRERYCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRG--HD--------RFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYK--SLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIP 1879
            D R  +T+E ED L EFI GEH+ GRQ FRRT+ D  +  CS    +SNR   GLLQRLG++R RGRIK PPL+ +R  RIR+FLV+MD+AKRAEDAG+AVIVYM++SFVHQAHG  YS FP            +T  +  RM  V A  E   +       P R  W        K      +  +M +     A  + + +L+ G  H+        ++  H +T     P F A      KK  LVLDNASYHH F  EV+VPETN+KK+N +LLRK+G  + K    +  G   E++FE+P     S PN  + G VS++E+   TR Y     P+ LEE+  TYMRE  W LIWTP YMP+FQPIELFWQHGK Y   S++F+  R + +VW++IR GWYGD E  GQE GWKAA+C KLV HAIG+M+ WI    G LSG IG+LE P
Sbjct:  168 DGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKD--YLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAELQEGFPIREGWFKAKENRAKKIKPGEADFEMSDE--QTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLT-----PAFDAQ--FKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRES-EGKAAEYNFEVPAQG--SLPNANRNG-VSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYHYVSIHFEKGRNVLDVWKKIRLGWYGDPEWDGQERGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 606          
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 6.060e-107
Identity = 203/440 (46.14%), Postives = 261/440 (59.32%), Query Frame = 2
Query:  593 DKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FP------------KTRIELCRM---------GSVAQRERYCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRG--HD--------RFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMN 1819
            D R  +TQE ED L EFI GEH+ GRQ FRRT+ D  +  CS    +SNR   GLLQRLG++R RGRIK PPL+ +R  RIR+FLV+MD+AK AEDAG+AVIVYM++SFVHQAHG  YS FP            +T  +  RM         G +A+ +           P R  W        K      +  +M +     A  + + +L+ G  H+        ++  H +T     P F A      KK  LVLDNASYHH F  EV+VPETN+KK+N +LLRK+G  + K    +  G   E++FE+P     S PN  ++ GVS++E+   TR Y     P+ LEE+  TYMRE  W LIWTP YMP+FQPIELFWQHGK Y S++F+  R + +VW+QIR GWYGD E  GQEGGWKAA+C KLV HAIG+M+
Sbjct:   91 DGRRVITQEQEDGLREFIKGEHEAGRQVFRRTVKD--YLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKGAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGF--------PIREGWFKAKENRAKKIKPGEADFEMSDE--QTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLT-----PAFDAQ--FKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRES-EGKAAEYNFEVPAQG--SLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMD 508          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIM5_9PHAE1.210e-16257.45DDE_3 domain-containing protein n=4 Tax=Ectocarpus... [more]
A0A6H5JR41_9PHAE1.060e-16057.23DDE_3 domain-containing protein n=5 Tax=Ectocarpus... [more]
D8LNM6_ECTSI6.310e-16056.45DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KDX7_9PHAE6.960e-14556.15DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K024_9PHAE1.050e-13950.51DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KKL0_9PHAE2.120e-12855.58DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KCN2_9PHAE1.520e-11446.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHE7_9PHAE7.550e-11252.89DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KDX2_9PHAE2.910e-10846.92Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP14_9PHAE6.060e-10746.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10140contigH-elongata_contig10140:6585..8972 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-01_001030.1
Exons2
Model size1963
Cds size447
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10140.124.1prot_H-elongata_contig10140.124.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10140 7685..8556 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929553.743877-UTR-H-elongata_contig10140:6584..76841622929553.743877-UTR-H-elongata_contig10140:6584..7684Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10140 6585..7684 -
1691679067.3958764-UTR-H-elongata_contig10140:6584..76841691679067.3958764-UTR-H-elongata_contig10140:6584..7684Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10140 6585..7684 -
1622929553.8155622-UTR-H-elongata_contig10140:8556..89721622929553.8155622-UTR-H-elongata_contig10140:8556..8972Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10140 8557..8972 -
1691679067.4268367-UTR-H-elongata_contig10140:8556..89721691679067.4268367-UTR-H-elongata_contig10140:8556..8972Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10140 8557..8972 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929553.7791378-CDS-H-elongata_contig10140:7684..80741622929553.7791378-CDS-H-elongata_contig10140:7684..8074Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10140 7685..8074 -
1691679067.4080951-CDS-H-elongata_contig10140:7684..80741691679067.4080951-CDS-H-elongata_contig10140:7684..8074Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10140 7685..8074 -
1622929553.7991583-CDS-H-elongata_contig10140:8499..85561622929553.7991583-CDS-H-elongata_contig10140:8499..8556Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10140 8500..8556 -
1691679067.4177985-CDS-H-elongata_contig10140:8499..85561691679067.4177985-CDS-H-elongata_contig10140:8499..8556Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10140 8500..8556 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10140.124.1

>prot_H-elongata_contig10140.124.1 ID=prot_H-elongata_contig10140.124.1|Name=mRNA_H-elongata_contig10140.124.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp
MLLFAFRKEGSSENKAVNQVLKTFKVGHEKVREVNNHWWDHRELYETNGS
GRGKAIKKATSDFALLKSQRTNFTSSSTASTRSGAKVFAGRWRIGRLRLA
ARRRYCRTAWKRGCYKGSDIGAIEEESKHRRWMPKGLRAFVCFSLKWT*
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mRNA from alignment at H-elongata_contig10140:6585..8972-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10140.124.1 ID=mRNA_H-elongata_contig10140.124.1|Name=mRNA_H-elongata_contig10140.124.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2388bp|location=Sequence derived from alignment at H-elongata_contig10140:6585..8972- (Himanthalia elongata Himel1 dioecious)
CTGACGATGGCGAAGGGGAAAAACCGACCGACCAATGTCGGTAGAGGCCG CCCGCGGAGCGAGATCAAGAAGGCCCAAACTGAAAGGGCGAGAGATGCCG TAGCTCTAGACAGACTTCGGGTTCAGCTGAACGCCCAGAAGGCGGCGCTG TCAGCTACCTTGCTGGAGCTTAAGGACAGGGGAAATGATATTAAGGTGAA GGAGCGTGATATTGCAAAGAAGGAGGCATAGATTTCCCGCGCAATCGCGA AGCGGGTAGCGGATGTACAGCGAGCACAGGAGTTGATCGAAGCGGCCGCC CAAGCCTCCAACTCAAGACTTTTGGAGTTCAGCTTTGACTTTATCAACAA TTCTATAGAGGATCTCAAGCCTAGCACTGGCCAAATCGTGTGCAAAACCC AGTCCAGGATGATCTAATGCTCCTGTTCGCTTTTCGCAAGGAAGGAAGCT CTGAGAATAAGGCGGTGAACCAGGTCAGTAGAGCTTCAGAGTTTCGGGTT TGTACGTGTAGCTGTGCGAAAAAAAGGGGTGGGTATAATATTGTATAAGA CTCATTCCTTAGAGTGCTTTCAGCGGTATCATTTACAGGAGTATCTTGCT CCTTGTATACATTTTTCGAGCCCTTTTTAACTGCTGTTTGGTATTAATAC TTTCAGCTACATAATATTAATATTTACATACACTTTCCCCGCCCCATCTG AGTGTTATTGTGCAATATATATCCTTCGCAACACTGCTGTCTGTACGTGT TAACCACTATTTTTTACCGCTTGGGGATACCGGTCTGTTACTCCACTGCA GCGGTCTTTCGCGATCTTCTTGTATGTACTTGCGAAAATATTACTGCGTG TTACGCTGATCTCGCACTCATATGATCATGCATCGCGCTGTCTTGCAGGT GTTGAAAACCTTCAAGGTTGGTCACGAGAAAGTTAGGGAGGTAAACAACC ACTGGTGGGATCATCGAGAGTTGTACGAGACCAACGGCAGCGGGAGAGGG AAGGCCATAAAAAAGGCGACAAGCGACTTCGCCTTACTCAAGAGCCAGAG GACCAACTTCACGAGTTCATCAACGGCGAGCACAAGGTCGGGCGCCAAGG TTTTCGCCGGACGTTGGCGGATTGGACGTTTACGGCTTGCAGCACGGAGA CGCTACTGTCGAACCGCGTGGAAGAGGGGTTGCTACAAAGGCTCGGATAT AGGCGCTATAGAGGAAGAATCAAAACACCGCCGTTGGATGCCAAAAGGCT TGCGCGCATTCGTATGTTTCTCGTTGAAATGGACATAGCAAAACGAGCGG AAGATGCGGGGTTGGCTGTCATTGTGTATATGAATCAGAGTTTCGTCCAC CAGGCGCACGGTTTCCCGTACTCGTAGTTCCCAAAGACGAGGATAGAGTT GTGCAGGATGGGATCGGTCGCACAACGGGAAAGGTATTGCGTATGATCAT GATGCATGTAATCACCAAGTAGGGGCTGTTGGTTAAGCCTTTTGAGAACG GCAGGGAAAAGCAAGGGGGAAAGGAATTCAAAATGAAAAATGAAAAACAA CTGAGTTTCTTTGGCAGGCGAAGTTGGCAAAAGGCGATTATCACGTGGCC ATGACCGATTCTATGTTCATGGAGTGACTTAAGCACCGCCTTGACCCGGC TTTCAAGCAAACCCTGCTCTTAGCGGAAAAAAGAAGATCCTTGTGCTGGA CAACGCGTCGTACCATCATGGCTTCAAAGCTGAGGTTGAGGTACCCGAGA CCAACACCAAGAAGCACAATGCCCAATTGTTGCGTAAGTTTGGCGCGCGG ACGATCAAGGCTAAAATTGCCGCTGTCAACGGTGCAGTGGTTGAACACAG CTTTGAAATGCCGACATATCATGGTACTTCCTTCCCTAATGTGCGACAGG AGGGCGGCGTAAGCAGAAAAGAGGTAACACTGGCTACTCGGGAGTATCTT TGCCTTAAACACCCTGAAACGCTCGAAGAACGGGTGGTGACTTACATGCG GGAGGCGGAGTGGGAGTTGATTTGGACGCCGTCTTACATGCCTTCTTTCC AACCGATCGAGCTTTTTTGGCAGCATGGGAAGCAGTATAAAAGTCTCAAC TTTAAGTTGAAACGAAAGATTCAGGAGGTATGGGAACAAATCCGTTAAGG GTGGTACGGAGATACGGAATAGTGAGGCCAAGAGGGGGGCTGGAAGGCAG CTGATTGTTTAAAATTGGTTGCCCATGCCATTGGAGAGATGAACACGTGG ATTAAAAATCGTGACGGAGTCCTAAGTGGTGCGATAGGCACGCTTGAAAT TCCAGAACGATATGACAAGGACGACGTATCGCATGTGGGTGATATCGAGG TTGGGGTTGGGGGGCTGATTGAAAAGGAAAGAGAAGAG
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Coding sequence (CDS) from alignment at H-elongata_contig10140:6585..8972-

>mRNA_H-elongata_contig10140.124.1 ID=mRNA_H-elongata_contig10140.124.1|Name=mRNA_H-elongata_contig10140.124.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=894bp|location=Sequence derived from alignment at H-elongata_contig10140:6585..8972- (Himanthalia elongata Himel1 dioecious)
ATGCTCCTGTTCGCTTTTCGCAAGGAAGGAAGCTCTGAGAATAAGGCGGT
GAACCAGATGCTCCTGTTCGCTTTTCGCAAGGAAGGAAGCTCTGAGAATA
AGGCGGTGAACCAGGTGTTGAAAACCTTCAAGGTTGGTCACGAGAAAGTT
AGGGAGGTAAACAACCACTGGTGGGATCATCGAGAGTTGTACGAGACCAA
CGGCAGCGGGAGAGGGAAGGCCATAAAAAAGGCGACAAGCGACTTCGCCT
TACTCAAGAGCCAGAGGACCAACTTCACGAGTTCATCAACGGCGAGCACA
AGGTCGGGCGCCAAGGTTTTCGCCGGACGTTGGCGGATTGGACGTTTACG
GCTTGCAGCACGGAGACGCTACTGTCGAACCGCGTGGAAGAGGGGTTGCT
ACAAAGGCTCGGATATAGGCGCTATAGAGGAAGAATCAAAACACCGCCGT
TGGATGCCAAAAGGCTTGCGCGCATTCGTATGTTTCTCGTTGAAATGGAC
ATAGGTGTTGAAAACCTTCAAGGTTGGTCACGAGAAAGTTAGGGAGGTAA
ACAACCACTGGTGGGATCATCGAGAGTTGTACGAGACCAACGGCAGCGGG
AGAGGGAAGGCCATAAAAAAGGCGACAAGCGACTTCGCCTTACTCAAGAG
CCAGAGGACCAACTTCACGAGTTCATCAACGGCGAGCACAAGGTCGGGCG
CCAAGGTTTTCGCCGGACGTTGGCGGATTGGACGTTTACGGCTTGCAGCA
CGGAGACGCTACTGTCGAACCGCGTGGAAGAGGGGTTGCTACAAAGGCTC
GGATATAGGCGCTATAGAGGAAGAATCAAAACACCGCCGTTGGATGCCAA
AAGGCTTGCGCGCATTCGTATGTTTCTCGTTGAAATGGACATAG
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